Class I heat shock
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g13900 |
| malus_domestica | MD05G1240300.v1.1 MD10G1218300.v1.1 |
| prunus_persica | Prupe.4G125800_v2.0.a1 |
| pyrus_communis | pycom05g21630 |
| rosa_chinensis | RchiOBHm_Chr5g0023111 |
| rosa_laevigata | RLG00000032699 |
| rosa_roxburghii | Rroxscaffold_1G00056240 |
| rosa_rugosa | Rorug05G0077200 |
| rosa_samantha | Rh5AG163300 Rh5BG162600 Rh5CG177500 Rh5DG163900 |
| rosa_wichuraiana | Rw5G014730 Rw5G015000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 78 |
| AclWI | GGATC | 2 cut(s) | 137, 149 |
| AcsI | RAATTY | 1 cut(s) | 77 |
| AcuI | CTGAAG | 1 cut(s) | 168 |
| AgsI | TTSAA | 1 cut(s) | 117 |
| AlwI | GGATC | 2 cut(s) | 137, 149 |
| ApeKI | GCWGC | 1 cut(s) | 35 |
| ApoI | RAATTY | 1 cut(s) | 77 |
| AspS9I | GGNCC | 1 cut(s) | 67 |
| AsuHPI | GGTGA | 1 cut(s) | 152 |
| AvaII | GGWCC | 1 cut(s) | 67 |
| BbvI | GCAGC | 1 cut(s) | 47 |
| BfuAI | ACCTGC | 1 cut(s) | 78 |
| BisI | GCNGC | 1 cut(s) | 36 |
| BlsI | GCNGC | 1 cut(s) | 37 |
| Bme18I | GGWCC | 1 cut(s) | 67 |
| BmgT120I | GGNCC | 1 cut(s) | 67 |
| BmsI | GCATC | 2 cut(s) | 116, 176 |
| BpmI | CTGGAG | 1 cut(s) | 198 |
| Bse3DI | GCAATG | 1 cut(s) | 130 |
| BseGI | GGATG | 2 cut(s) | 52, 167 |
| BseMI | GCAATG | 1 cut(s) | 130 |
| BseRI | GAGGAG | 1 cut(s) | 195 |
| BseXI | GCAGC | 1 cut(s) | 47 |
| BsgI | GTGCAG | 1 cut(s) | 54 |
| BslFI | GGGAC | 1 cut(s) | 13 |
| BsmFI | GGGAC | 1 cut(s) | 13 |
| Bsp143I | GATC | 3 cut(s) | 142, 154, 195 |
| BspMI | ACCTGC | 1 cut(s) | 78 |
| BspPI | GGATC | 2 cut(s) | 137, 149 |
| BsrDI | GCAATG | 1 cut(s) | 130 |
| BssMI | GATC | 3 cut(s) | 142, 154, 195 |
| Bst4CI | ACNGT | 2 cut(s) | 163, 211 |
| Bst6I | CTCTTC | 1 cut(s) | 126 |
| BstDEI | CTNAG | 1 cut(s) | 199 |
| BstF5I | GGATG | 2 cut(s) | 52, 167 |
| BstKTI | GATC | 3 cut(s) | 145, 157, 198 |
| BstMBI | GATC | 3 cut(s) | 142, 154, 195 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 70 |
| BstV1I | GCAGC | 1 cut(s) | 47 |
| BtsCI | GGATG | 2 cut(s) | 52, 167 |
| BtsIMutI | CAGTG | 2 cut(s) | 203, 216 |
| BveI | ACCTGC | 1 cut(s) | 78 |
| Cfr13I | GGNCC | 1 cut(s) | 67 |
| CviJI | RGCY | 5 cut(s) | 14, 38, 64, 86, 137 |
| CviKI_1 | RGCY | 5 cut(s) | 14, 38, 64, 86, 137 |
| DdeI | CTNAG | 1 cut(s) | 199 |
| DpnI | GATC | 3 cut(s) | 144, 156, 197 |
| DpnII | GATC | 3 cut(s) | 142, 154, 195 |
| Eam1104I | CTCTTC | 1 cut(s) | 126 |
| EarI | CTCTTC | 1 cut(s) | 126 |
| Eco47I | GGWCC | 1 cut(s) | 67 |
| Eco57I | CTGAAG | 1 cut(s) | 168 |
| FaiI | YATR | 4 cut(s) | 22, 56, 58, 60 |
| FaqI | GGGAC | 1 cut(s) | 13 |
| Fnu4HI | GCNGC | 1 cut(s) | 36 |
| FokI | GGATG | 2 cut(s) | 59, 154 |
| Fsp4HI | GCNGC | 1 cut(s) | 36 |
| GluI | GCNGC | 1 cut(s) | 36 |
| GsuI | CTGGAG | 1 cut(s) | 198 |
| HphI | GGTGA | 1 cut(s) | 152 |
| Hpy188III | TCNNGA | 2 cut(s) | 146, 177 |
| HpyAV | CCTTC | 1 cut(s) | 181 |
| HpyCH4III | ACNGT | 2 cut(s) | 163, 211 |
| HpyCH4V | TGCA | 3 cut(s) | 35, 107, 123 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 70 |
| HpyF3I | CTNAG | 1 cut(s) | 199 |
| Kzo9I | GATC | 3 cut(s) | 142, 154, 195 |
| LmnI | GCTCC | 1 cut(s) | 182 |
| LpnPI | CCDG | 6 cut(s) | 50, 59, 83, 123, 159, 162 |
| Lsp1109I | GCAGC | 1 cut(s) | 47 |
| LweI | GCATC | 2 cut(s) | 116, 176 |
| MalI | GATC | 3 cut(s) | 144, 156, 197 |
| MboI | GATC | 3 cut(s) | 142, 154, 195 |
| MboII | GAAGA | 1 cut(s) | 143 |
| MfeI | CAATTG | 1 cut(s) | 186 |
| MluCI | AATT | 4 cut(s) | 5, 77, 112, 186 |
| MnlI | CCTC | 2 cut(s) | 127, 173 |
| MunI | CAATTG | 1 cut(s) | 186 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 70 |
| NdeII | GATC | 3 cut(s) | 142, 154, 195 |
| PkrI | GCNGC | 1 cut(s) | 37 |
| PspPI | GGNCC | 1 cut(s) | 67 |
| SatI | GCNGC | 1 cut(s) | 36 |
| Sau3AI | GATC | 3 cut(s) | 142, 154, 195 |
| Sau96I | GGNCC | 1 cut(s) | 67 |
| SetI | ASST | 1 cut(s) | 72 |
| SfaNI | GCATC | 2 cut(s) | 116, 176 |
| SinI | GGWCC | 1 cut(s) | 67 |
| Sse9I | AATT | 4 cut(s) | 5, 77, 112, 186 |
| TaaI | ACNGT | 2 cut(s) | 163, 211 |
| TasI | AATT | 4 cut(s) | 5, 77, 112, 186 |
| TscAI | CASTG | 2 cut(s) | 210, 216 |
| TseI | GCWGC | 1 cut(s) | 35 |
| TspRI | CASTG | 2 cut(s) | 210, 216 |
| VpaK11BI | GGWCC | 1 cut(s) | 67 |
| XapI | RAATTY | 1 cut(s) | 77 |