Prupe.4G127900_v2.0.a1

Protein of unknown function (DUF620)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
7028562 .. 7031171
2610 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G127900.1

Sequence Viewer

Length: 1176 bp
ATGGGTTCCAAGGCAAGAAAGAAGCAGATATGGTGTCCACAGCCATTGACGCCGCTCATGGAAGGGCCAGACCCTGAAATGCAAGAGGAAGGAGGCAAGAAGGAGAGCTCTTGGGAAGTCATACGTGAATGGTTTAGGGCACAGAAGGGTGGGCTTCCTAATCCAGGGACTAATTTATCTACCTCAGGATATGGAAGTGGTGGTACTATTCCTGCCAAAAGGCAAGACCTAAGGCTGTTGCTTGGTGTGTTAGGCTGTCCCCTTGCTCCAATTCCCCAAGCCAATGACCCAATTGATCATCACCTCCTCCACATCAAGGACATCCCATTTGAAACTTCTATAGCGCATTACATTATACAGCAGTACTTGGCAGCCACAGGGTGCTTGAAGCAACAGAAGTGCAACAAAAACATGTATGCAAGTGGAAGTGTGAAGATGGTTTGTTGTGAAACAGAGGTTTCTGCCGGAAGAAATGTCAAGACTCTAGGAACAAGAAGTGGGGAAAGTGGGTGCTTTGTTCTTTGGCAAATGTTGCCTGGCATGTGGTCTTTGGAATTGGTGGTTGGAGGCAACAAGGTGGTGGCCGGTAGCGACGGCAAGACAGTTTGGAGGCACACCCCTTGGCTCGGTACTCATGCAGCCAAAGGTCCTCAACGCCCTTTGCGCCGCCTCATTCAGGGCCTAGACCCAAAGAGCACAGCAAGCTTGTTTGCCAAGGCACAATGCTTGGGGGAGAAAAGAATCGGAGAGGATGATTGCTTTGTACTAAAAGTTTCTGCCGATCGGGCGGCTGTGATGGAGAGAAGTGAGGGTCCGGCAGAGGTGATCAGGCATGCATTGTATGGCTATTTTTGCCAAAAGAGTGGCCTCCTCATATACTTAGAAGACTCACACCTCACTAGAGTTGAAGCCCCAGAAAATGAAACCGTCTATTGGGAGACCACCATAGGAAGCAGCATTGCAGACTATAGGGATGTGGATGGTGTGCTCATAGCTCATCAGGGCCGTTCGATCGCCACCGTCTTCCGGTGCGGTGAGGTGTCCATGGAGTACACAAGGACTAGAATGGAGGAAGCTTGGAGCATTGATGACGTTGTGTTTAACGTACCAGGGCTTTCCATGGACTATTTCATTGCTCCTGCGGATATATTGGACAGTACTCTACAATCACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

392

Amino Acids

43.06

Weight (kDa)

6.33

Isoelectric Point (pI)

40.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015065)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G79420
fragaria_vesca FvH4_3g14040
malus_domestica MD05G1238500.v1.1 MD10G1216800.v1.1
prunus_persica Prupe.4G127900_v2.0.a1
pyrus_communis pycom05g21460
rosa_chinensis RchiOBHm_Chr5g0023361
rosa_laevigata RLG00000032716
rosa_multiflora Rmu_sc0007223.1_g000005
rosa_roxburghii Rroxscaffold_1G00055980
rosa_rugosa Rorug05G0078600
rosa_samantha Rh5AG165500 Rh5BG164700 Rh5CG179600 Rh5DG166200
rosa_wichuraiana Rw5G014890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 55
AciI CCGC 5 cut(s) 53, 667, 788, 1032, 1142
AcoI YGGCCR 1 cut(s) 582
AcyI GRCGYC 1 cut(s) 50
AdeI CACNNNGTG 1 cut(s) 381
AfaI GTAC 7 cut(s) 205, 365, 631, 765, 1052, 1107, 1159
AfiI CCNNNNNNNGG 6 cut(s) 164, 316, 626, 676, 933, 1026
AflIII ACRYGT 1 cut(s) 411
AgsI TTSAA 3 cut(s) 332, 388, 908
AjnI CCWGG 3 cut(s) 163, 535, 1108
AjuI GAANNNNNNNTTGG 2 cut(s) 546, 578
AluBI AGCT 4 cut(s) 108, 705, 995, 1076
AluI AGCT 4 cut(s) 108, 705, 995, 1076
Alw21I GWGCWC 3 cut(s) 110, 698, 990
Alw26I GTCTC 1 cut(s) 932
AlwNI CAGNNNCTG 1 cut(s) 74
AoxI GGCC 5 cut(s) 65, 582, 679, 865, 1003
ApeKI GCWGC 3 cut(s) 371, 638, 954
ArsI GACNNNNNNTTYG 2 cut(s) 311, 343
AspLEI GCGC 2 cut(s) 346, 666
AspS9I GGNCC 5 cut(s) 65, 647, 679, 812, 1003
AsuHPI GGTGA 4 cut(s) 293, 835, 1046, 1161
AvaII GGWCC 2 cut(s) 647, 812
AxyI CCTNAGG 2 cut(s) 184, 230
BaeGI GKGCMC 1 cut(s) 142
BanII GRGCYC 1 cut(s) 110
BarI GAAGNNNNNNTAC 2 cut(s) 187, 219
BbsI GAAGAC 2 cut(s) 891, 1015
Bbv12I GWGCWC 3 cut(s) 110, 698, 990
BbvI GCAGC 3 cut(s) 383, 650, 966
BccI CCATC 3 cut(s) 430, 790, 974
BceAI ACGGC 2 cut(s) 610, 990
BciT130I CCWGG 3 cut(s) 165, 537, 1110
BclI TGATCA 2 cut(s) 295, 825
BcoDI GTCTC 1 cut(s) 932
BfaI CTAG 4 cut(s) 485, 683, 900, 1062
BfmI CTRYAG 2 cut(s) 339, 967
BglI GCCNNNNNGGC 1 cut(s) 785
BisI GCNGC 6 cut(s) 53, 372, 639, 667, 789, 955
BlsI GCNGC 6 cut(s) 54, 373, 640, 668, 790, 956
BmcAI AGTACT 2 cut(s) 365, 1159
Bme1390I CCNGG 3 cut(s) 165, 537, 1110
Bme18I GGWCC 2 cut(s) 647, 812
BmgT120I GGNCC 5 cut(s) 65, 647, 679, 812, 1003
BmiI GGNNCC 2 cut(s) 7, 813
BmrFI CCNGG 3 cut(s) 165, 537, 1110
BpiI GAAGAC 2 cut(s) 891, 1015
BsaAI YACGTR 1 cut(s) 125
BsaHI GRCGYC 1 cut(s) 50
BsaI GGTCTC 1 cut(s) 932
BsaJI CCNNGG 7 cut(s) 9, 164, 620, 714, 1044, 1109, 1119
BsaWI WCCGGW 1 cut(s) 1026
Bsc4I CCNNNNNNNGG 6 cut(s) 164, 316, 626, 676, 933, 1026
Bse118I RCCGGY 1 cut(s) 584
Bse21I CCTNAGG 2 cut(s) 184, 230
Bse3DI GCAATG 2 cut(s) 957, 1131
BseBI CCWGG 3 cut(s) 165, 537, 1110
BseDI CCNNGG 7 cut(s) 9, 164, 620, 714, 1044, 1109, 1119
BseGI GGATG 4 cut(s) 321, 757, 979, 985
BseLI CCNNNNNNNGG 6 cut(s) 164, 316, 626, 676, 933, 1026
BseMI GCAATG 2 cut(s) 957, 1131
BseMII CTCAG 1 cut(s) 198
BseRI GAGGAG 2 cut(s) 296, 860
BseSI GKGCMC 1 cut(s) 142
BseXI GCAGC 3 cut(s) 383, 650, 966
Bsh1285I CGRYCG 2 cut(s) 784, 1014
BshFI GGCC 5 cut(s) 67, 584, 681, 867, 1005
BsiEI CGRYCG 2 cut(s) 784, 1014
BsiHKAI GWGCWC 3 cut(s) 110, 698, 990
BsiSI CCGG 4 cut(s) 465, 585, 815, 1027
BslFI GGGAC 2 cut(s) 181, 243
BslI CCNNNNNNNGG 6 cut(s) 164, 316, 626, 676, 933, 1026
BsmAI GTCTC 1 cut(s) 932
BsmFI GGGAC 2 cut(s) 181, 243
BsnI GGCC 5 cut(s) 67, 584, 681, 867, 1005
Bso31I GGTCTC 1 cut(s) 932
Bsp1286I GDGCHC 4 cut(s) 110, 142, 698, 990
Bsp143I GATC 4 cut(s) 295, 781, 825, 1011
Bsp19I CCATGG 2 cut(s) 1044, 1119
BspACI CCGC 5 cut(s) 53, 667, 788, 1032, 1142
BspANI GGCC 5 cut(s) 67, 584, 681, 867, 1005
BspCNI CTCAG 1 cut(s) 197
BspLI GGNNCC 2 cut(s) 7, 813
BspTNI GGTCTC 1 cut(s) 932
BsrBI CCGCTC 1 cut(s) 55
BsrDI GCAATG 2 cut(s) 957, 1131
BsrFI RCCGGY 1 cut(s) 584
BssAI RCCGGY 1 cut(s) 584
BssECI CCNNGG 7 cut(s) 9, 164, 620, 714, 1044, 1109, 1119
BssMI GATC 4 cut(s) 295, 781, 825, 1011
BssNI GRCGYC 1 cut(s) 50
BssT1I CCWWGG 5 cut(s) 9, 620, 714, 1044, 1119
Bst2UI CCWGG 3 cut(s) 165, 537, 1110
Bst4CI ACNGT 4 cut(s) 604, 928, 1021, 1157
BstACI GRCGYC 1 cut(s) 50
BstAPI GCANNNNNTGC 1 cut(s) 532
BstBAI YACGTR 1 cut(s) 125
BstC8I GCNNGC 2 cut(s) 703, 834
BstDEI CTNAG 3 cut(s) 184, 230, 880
BstDSI CCRYGG 2 cut(s) 1044, 1119
BstENI CCTNNNNNAGG 2 cut(s) 162, 674
BstF5I GGATG 4 cut(s) 321, 757, 979, 985
BstHHI GCGC 2 cut(s) 346, 666
BstKTI GATC 4 cut(s) 298, 784, 828, 1014
BstMAI GTCTC 1 cut(s) 932
BstMBI GATC 4 cut(s) 295, 781, 825, 1011
BstMCI CGRYCG 2 cut(s) 784, 1014
BstMWI GCNNNNNNNGC 6 cut(s) 49, 532, 663, 702, 785, 852
BstNI CCWGG 3 cut(s) 165, 537, 1110
BstNSI RCATGY 3 cut(s) 415, 544, 836
BstSCI CCNGG 3 cut(s) 163, 535, 1108
BstSFI CTRYAG 2 cut(s) 339, 967
BstSLI GKGCMC 1 cut(s) 142
BstV1I GCAGC 3 cut(s) 383, 650, 966
BstV2I GAAGAC 2 cut(s) 891, 1015
BstXI CCANNNNNNTGG 1 cut(s) 863
Bsu36I CCTNAGG 2 cut(s) 184, 230
BsuRI GGCC 5 cut(s) 67, 584, 681, 867, 1005
BtgI CCRYGG 2 cut(s) 1044, 1119
BtsCI GGATG 4 cut(s) 321, 757, 979, 985
Cac8I GCNNGC 2 cut(s) 703, 834
CaiI CAGNNNCTG 1 cut(s) 74
CfoI GCGC 2 cut(s) 346, 666
Cfr10I RCCGGY 1 cut(s) 584
Cfr13I GGNCC 5 cut(s) 65, 647, 679, 812, 1003
CseI GACGC 1 cut(s) 58
Csp6I GTAC 7 cut(s) 204, 364, 630, 764, 1051, 1106, 1158
CspCI CAANNNNNGTGG 2 cut(s) 27, 62
CviAII CATG 8 cut(s) 58, 412, 541, 635, 833, 1045, 1120, 1173
CviQI GTAC 7 cut(s) 204, 364, 630, 764, 1051, 1106, 1158
DdeI CTNAG 3 cut(s) 184, 230, 880
DpnI GATC 4 cut(s) 297, 783, 827, 1013
DpnII GATC 4 cut(s) 295, 781, 825, 1011
DraIII CACNNNGTG 1 cut(s) 381
EaeI YGGCCR 1 cut(s) 582
Ecl136II GAGCTC 1 cut(s) 108
Eco130I CCWWGG 5 cut(s) 9, 620, 714, 1044, 1119
Eco24I GRGCYC 1 cut(s) 110
Eco31I GGTCTC 1 cut(s) 932
Eco47I GGWCC 2 cut(s) 647, 812
Eco53kI GAGCTC 1 cut(s) 108
Eco81I CCTNAGG 2 cut(s) 184, 230
EcoICRI GAGCTC 1 cut(s) 108
EcoNI CCTNNNNNAGG 2 cut(s) 162, 674
EcoO109I RGGNCCY 2 cut(s) 647, 679
EcoRII CCWGG 3 cut(s) 163, 535, 1108
EcoT14I CCWWGG 5 cut(s) 9, 620, 714, 1044, 1119
EcoT22I ATGCAT 1 cut(s) 838
EcoT38I GRGCYC 1 cut(s) 110
ErhI CCWWGG 5 cut(s) 9, 620, 714, 1044, 1119
FaeI CATG 8 cut(s) 61, 415, 544, 638, 836, 1048, 1123, 1176
FaqI GGGAC 2 cut(s) 181, 243
FatI CATG 8 cut(s) 57, 411, 540, 634, 832, 1044, 1119, 1172
FbaI TGATCA 2 cut(s) 295, 825
Fnu4HI GCNGC 6 cut(s) 53, 372, 639, 667, 789, 955
FokI GGATG 4 cut(s) 308, 764, 986, 992
FriOI GRGCYC 1 cut(s) 110
Fsp4HI GCNGC 6 cut(s) 53, 372, 639, 667, 789, 955
FspBI CTAG 4 cut(s) 485, 683, 900, 1062
GlaI GCGC 2 cut(s) 345, 665
GluI GCNGC 6 cut(s) 53, 372, 639, 667, 789, 955
HaeIII GGCC 5 cut(s) 67, 584, 681, 867, 1005
HapII CCGG 4 cut(s) 465, 585, 815, 1027
HgaI GACGC 1 cut(s) 58
HhaI GCGC 2 cut(s) 346, 666
Hin1I GRCGYC 1 cut(s) 50
Hin1II CATG 8 cut(s) 61, 415, 544, 638, 836, 1048, 1123, 1176
Hin6I GCGC 2 cut(s) 344, 664
HinP1I GCGC 2 cut(s) 344, 664
HindIII AAGCTT 2 cut(s) 703, 1074
HinfI GANTC 3 cut(s) 481, 741, 887
HpaII CCGG 4 cut(s) 465, 585, 815, 1027
HphI GGTGA 4 cut(s) 293, 835, 1046, 1161
Hpy166II GTNNAC 2 cut(s) 38, 1053
Hpy188I TCNGA 1 cut(s) 746
Hpy188III TCNNGA 2 cut(s) 186, 478
Hpy8I GTNNAC 2 cut(s) 38, 1053
Hpy99I CGWCG 1 cut(s) 596
HpyAV CCTTC 4 cut(s) 56, 83, 94, 139
HpyCH4III ACNGT 4 cut(s) 604, 928, 1021, 1157
HpyCH4IV ACGT 3 cut(s) 124, 1092, 1104
HpyCH4V TGCA 6 cut(s) 82, 402, 419, 638, 836, 962
HpyF10VI GCNNNNNNNGC 6 cut(s) 49, 532, 663, 702, 785, 852
HpyF3I CTNAG 3 cut(s) 184, 230, 880
HpySE526I ACGT 3 cut(s) 124, 1092, 1104
Hsp92I GRCGYC 1 cut(s) 50
Hsp92II CATG 8 cut(s) 61, 415, 544, 638, 836, 1048, 1123, 1176
HspAI GCGC 2 cut(s) 344, 664
Ksp22I TGATCA 2 cut(s) 295, 825
Kzo9I GATC 4 cut(s) 295, 781, 825, 1011
LmnI GCTCC 3 cut(s) 271, 1080, 1141
Lsp1109I GCAGC 3 cut(s) 383, 650, 966
MaeI CTAG 4 cut(s) 485, 683, 900, 1062
MaeII ACGT 3 cut(s) 124, 1092, 1104
MalI GATC 4 cut(s) 297, 783, 827, 1013
MbiI CCGCTC 1 cut(s) 55
MboI GATC 4 cut(s) 295, 781, 825, 1011
MboII GAAGA 4 cut(s) 445, 480, 896, 1015
MfeI CAATTG 1 cut(s) 291
MhlI GDGCHC 4 cut(s) 110, 142, 698, 990
MluCI AATT 4 cut(s) 172, 270, 291, 554
MlyI GAGTC 2 cut(s) 475, 881
MmeI TCCRAC 1 cut(s) 544
Mph1103I ATGCAT 1 cut(s) 838
MseI TTAA 1 cut(s) 1101
MspI CCGG 4 cut(s) 465, 585, 815, 1027
MspR9I CCNGG 3 cut(s) 165, 537, 1110
MunI CAATTG 1 cut(s) 291
MvaI CCWGG 3 cut(s) 165, 537, 1110
MwoI GCNNNNNNNGC 6 cut(s) 49, 532, 663, 702, 785, 852
NcoI CCATGG 2 cut(s) 1044, 1119
NdeII GATC 4 cut(s) 295, 781, 825, 1011
NlaIII CATG 8 cut(s) 61, 415, 544, 638, 836, 1048, 1123, 1176
NlaIV GGNNCC 2 cut(s) 7, 813
NsiI ATGCAT 1 cut(s) 838
NspI RCATGY 3 cut(s) 415, 544, 836
PaeI GCATGC 1 cut(s) 836
PciI ACATGT 1 cut(s) 411
PfeI GAWTC 1 cut(s) 741
PkrI GCNGC 6 cut(s) 54, 373, 640, 668, 790, 956
Ple19I CGATCG 2 cut(s) 784, 1014
PleI GAGTC 2 cut(s) 475, 881
PpsI GAGTC 2 cut(s) 475, 881
Ppu21I YACGTR 1 cut(s) 125
PpuMI RGGWCCY 1 cut(s) 647
PscI ACATGT 1 cut(s) 411
Psp124BI GAGCTC 1 cut(s) 110
Psp5II RGGWCCY 1 cut(s) 647
Psp6I CCWGG 3 cut(s) 163, 535, 1108
PspGI CCWGG 3 cut(s) 163, 535, 1108
PspN4I GGNNCC 2 cut(s) 7, 813
PspPI GGNCC 5 cut(s) 65, 647, 679, 812, 1003
PspPPI RGGWCCY 1 cut(s) 647
PstNI CAGNNNCTG 1 cut(s) 74
PvuI CGATCG 2 cut(s) 784, 1014
RsaI GTAC 7 cut(s) 205, 365, 631, 765, 1052, 1107, 1159
RsaNI GTAC 7 cut(s) 204, 364, 630, 764, 1051, 1106, 1158
SacI GAGCTC 1 cut(s) 110
SaqAI TTAA 1 cut(s) 1101
SatI GCNGC 6 cut(s) 53, 372, 639, 667, 789, 955
Sau3AI GATC 4 cut(s) 295, 781, 825, 1011
Sau96I GGNCC 5 cut(s) 65, 647, 679, 812, 1003
ScaI AGTACT 2 cut(s) 365, 1159
SchI GAGTC 2 cut(s) 475, 881
ScrFI CCNGG 3 cut(s) 165, 537, 1110
SduI GDGCHC 4 cut(s) 110, 142, 698, 990
SfcI CTRYAG 2 cut(s) 339, 967
SinI GGWCC 2 cut(s) 647, 812
SphI GCATGC 1 cut(s) 836
Sse9I AATT 4 cut(s) 172, 270, 291, 554
SsiI CCGC 5 cut(s) 53, 667, 788, 1032, 1142
SspMI CTAG 4 cut(s) 485, 683, 900, 1062
SstI GAGCTC 1 cut(s) 110
StyD4I CCNGG 3 cut(s) 163, 535, 1108
StyI CCWWGG 5 cut(s) 9, 620, 714, 1044, 1119
TaaI ACNGT 4 cut(s) 604, 928, 1021, 1157
TaiI ACGT 3 cut(s) 127, 1095, 1107
TaqI TCGA 1 cut(s) 1010
TasI AATT 4 cut(s) 172, 270, 291, 554
TatI WGTACW 4 cut(s) 363, 763, 1050, 1157
TauI GCSGC 3 cut(s) 55, 669, 791
TfiI GAWTC 1 cut(s) 741
Tru1I TTAA 1 cut(s) 1101
Tru9I TTAA 1 cut(s) 1101
TseI GCWGC 3 cut(s) 371, 638, 954
TspDTI ATGAA 2 cut(s) 936, 1120
VpaK11BI GGWCC 2 cut(s) 647, 812
XagI CCTNNNNNAGG 2 cut(s) 162, 674
XceI RCATGY 3 cut(s) 415, 544, 836
XspI CTAG 4 cut(s) 485, 683, 900, 1062
ZrmI AGTACT 2 cut(s) 365, 1159
Zsp2I ATGCAT 1 cut(s) 838
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.