Prupe.4G163600_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
9486627 .. 9488706
2080 bp
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UTR
Exon/CDS
Intron
Prupe.4G163600.2

Sequence Viewer

Length: 183 bp
ATGATTGGAGAAGAATTAGCGGGCCCCCCAGCCCCAAAGCTCCTCCGTCTGCTTTATTTTGTCGGCGCTGGCTTTATTTGCACTGTTGGAATCAATAAATGGCGTGAGCTTCAGAACATGTCAATTTTACAGCAGCAGCAGCAGCAACAGCTCCCTGAAAATGCCGCAAATGCCCTTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

61

Amino Acids

6.68

Weight (kDa)

5.2

Isoelectric Point (pI)

75.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0017211)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 20, 165
AcuI CTGAAG 1 cut(s) 95
AflIII ACRYGT 1 cut(s) 117
AluBI AGCT 3 cut(s) 40, 109, 151
AluI AGCT 3 cut(s) 40, 109, 151
AoxI GGCC 1 cut(s) 22
ApaI GGGCCC 1 cut(s) 26
ApeKI GCWGC 4 cut(s) 133, 136, 139, 142
AspLEI GCGC 1 cut(s) 68
AspS9I GGNCC 2 cut(s) 22, 23
BaeGI GKGCMC 1 cut(s) 26
BanII GRGCYC 1 cut(s) 26
BbvI GCAGC 4 cut(s) 145, 148, 151, 154
BfoI RGCGCY 1 cut(s) 69
BisI GCNGC 5 cut(s) 134, 137, 140, 143, 165
BlsI GCNGC 5 cut(s) 135, 138, 141, 144, 166
BmgT120I GGNCC 2 cut(s) 22, 23
BmiI GGNNCC 2 cut(s) 24, 25
BseRI GAGGAG 1 cut(s) 32
BseSI GKGCMC 1 cut(s) 26
BseXI GCAGC 4 cut(s) 145, 148, 151, 154
BseYI CCCAGC 1 cut(s) 28
BshFI GGCC 1 cut(s) 24
BsnI GGCC 1 cut(s) 24
Bsp120I GGGCCC 1 cut(s) 22
Bsp1286I GDGCHC 1 cut(s) 26
BspACI CCGC 2 cut(s) 20, 165
BspANI GGCC 1 cut(s) 24
BspLI GGNNCC 2 cut(s) 24, 25
Bst4CI ACNGT 1 cut(s) 85
BstC8I GCNNGC 2 cut(s) 22, 70
BstH2I RGCGCY 1 cut(s) 69
BstHHI GCGC 1 cut(s) 68
BstMWI GCNNNNNNNGC 5 cut(s) 78, 139, 142, 148, 170
BstNSI RCATGY 1 cut(s) 121
BstSLI GKGCMC 1 cut(s) 26
BstV1I GCAGC 4 cut(s) 145, 148, 151, 154
BsuRI GGCC 1 cut(s) 24
BtsIMutI CAGTG 1 cut(s) 81
Cac8I GCNNGC 2 cut(s) 22, 70
CfoI GCGC 1 cut(s) 68
Cfr13I GGNCC 2 cut(s) 22, 23
CviAII CATG 1 cut(s) 118
CviJI RGCY 6 cut(s) 24, 32, 40, 72, 109, 151
CviKI_1 RGCY 6 cut(s) 24, 32, 40, 72, 109, 151
Eco24I GRGCYC 1 cut(s) 26
Eco57I CTGAAG 1 cut(s) 95
EcoO109I RGGNCCY 1 cut(s) 23
EcoT38I GRGCYC 1 cut(s) 26
FaeI CATG 1 cut(s) 121
FaiI YATR 1 cut(s) 119
FatI CATG 1 cut(s) 117
FauI CCCGC 1 cut(s) 13
Fnu4HI GCNGC 5 cut(s) 134, 137, 140, 143, 165
FriOI GRGCYC 1 cut(s) 26
Fsp4HI GCNGC 5 cut(s) 134, 137, 140, 143, 165
GlaI GCGC 1 cut(s) 67
GluI GCNGC 5 cut(s) 134, 137, 140, 143, 165
GsaI CCCAGC 1 cut(s) 32
HaeII RGCGCY 1 cut(s) 69
HaeIII GGCC 1 cut(s) 24
HhaI GCGC 1 cut(s) 68
Hin1II CATG 1 cut(s) 121
Hin6I GCGC 1 cut(s) 66
HinP1I GCGC 1 cut(s) 66
HinfI GANTC 1 cut(s) 90
Hpy188I TCNGA 1 cut(s) 114
HpyCH4III ACNGT 1 cut(s) 85
HpyCH4V TGCA 1 cut(s) 81
HpyF10VI GCNNNNNNNGC 5 cut(s) 78, 139, 142, 148, 170
Hsp92II CATG 1 cut(s) 121
HspAI GCGC 1 cut(s) 66
LmnI GCTCC 2 cut(s) 45, 156
LpnPI CCDG 3 cut(s) 42, 54, 168
Lsp1109I GCAGC 4 cut(s) 145, 148, 151, 154
MboII GAAGA 1 cut(s) 23
MhlI GDGCHC 1 cut(s) 26
MluCI AATT 2 cut(s) 14, 123
MmeI TCCRAC 1 cut(s) 67
MnlI CCTC 1 cut(s) 53
MwoI GCNNNNNNNGC 5 cut(s) 78, 139, 142, 148, 170
NlaIII CATG 1 cut(s) 121
NlaIV GGNNCC 2 cut(s) 24, 25
NspI RCATGY 1 cut(s) 121
PciI ACATGT 1 cut(s) 117
PfeI GAWTC 1 cut(s) 90
PkrI GCNGC 5 cut(s) 135, 138, 141, 144, 166
PscI ACATGT 1 cut(s) 117
PspFI CCCAGC 1 cut(s) 28
PspN4I GGNNCC 2 cut(s) 24, 25
PspOMI GGGCCC 1 cut(s) 22
PspPI GGNCC 2 cut(s) 22, 23
SatI GCNGC 5 cut(s) 134, 137, 140, 143, 165
Sau96I GGNCC 2 cut(s) 22, 23
SduI GDGCHC 1 cut(s) 26
SetI ASST 3 cut(s) 42, 111, 153
SgeI CNNG 6 cut(s) 33, 41, 81, 116, 130, 167
SmlI CTYRAG 1 cut(s) 176
SmoI CTYRAG 1 cut(s) 176
Sse9I AATT 2 cut(s) 14, 123
SsiI CCGC 2 cut(s) 20, 165
TaaI ACNGT 1 cut(s) 85
TasI AATT 2 cut(s) 14, 123
TauI GCSGC 1 cut(s) 167
TfiI GAWTC 1 cut(s) 90
TscAI CASTG 1 cut(s) 88
TseI GCWGC 4 cut(s) 133, 136, 139, 142
TspGWI ACGGA 1 cut(s) 35
TspRI CASTG 1 cut(s) 88
XceI RCATGY 1 cut(s) 121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.