No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16916 AT1G16916 |
| malus_domestica | MD11G1264400.v1.1 |
| prunus_persica | Prupe.4G163600_v2.0.a1 Prupe.4G163600_v2.0.a1 Prupe.4G163600_v2.0.a1 Prupe.4G164100_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0030781 |
| rosa_multiflora | Rmu_sc0004119.1_g000002 Rmu_sc0021923.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00049540 |
| rosa_samantha | Rh5CG235300 |
| rosa_wichuraiana | Rw5G019490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 20, 136, 171 |
| AcuI | CTGAAG | 1 cut(s) | 95 |
| AluBI | AGCT | 3 cut(s) | 40, 109, 157 |
| AluI | AGCT | 3 cut(s) | 40, 109, 157 |
| AoxI | GGCC | 1 cut(s) | 23 |
| ApaI | GGGCCC | 1 cut(s) | 27 |
| ApeKI | GCWGC | 4 cut(s) | 139, 142, 145, 148 |
| AspLEI | GCGC | 3 cut(s) | 34, 68, 117 |
| AspS9I | GGNCC | 2 cut(s) | 23, 24 |
| BaeGI | GKGCMC | 1 cut(s) | 27 |
| BanII | GRGCYC | 1 cut(s) | 27 |
| BbvI | GCAGC | 4 cut(s) | 151, 154, 157, 160 |
| BfoI | RGCGCY | 2 cut(s) | 35, 69 |
| BisI | GCNGC | 6 cut(s) | 137, 140, 143, 146, 149, 171 |
| BlsI | GCNGC | 6 cut(s) | 138, 141, 144, 147, 150, 172 |
| BmgT120I | GGNCC | 2 cut(s) | 23, 24 |
| BmiI | GGNNCC | 3 cut(s) | 24, 25, 26 |
| BseSI | GKGCMC | 1 cut(s) | 27 |
| BseXI | GCAGC | 4 cut(s) | 151, 154, 157, 160 |
| BseYI | CCCAGC | 1 cut(s) | 28 |
| BshFI | GGCC | 1 cut(s) | 25 |
| BsnI | GGCC | 1 cut(s) | 25 |
| Bsp120I | GGGCCC | 1 cut(s) | 23 |
| Bsp1286I | GDGCHC | 1 cut(s) | 27 |
| BspACI | CCGC | 3 cut(s) | 20, 136, 171 |
| BspANI | GGCC | 1 cut(s) | 25 |
| BspLI | GGNNCC | 3 cut(s) | 24, 25, 26 |
| Bst4CI | ACNGT | 1 cut(s) | 85 |
| BstC8I | GCNNGC | 1 cut(s) | 70 |
| BstH2I | RGCGCY | 2 cut(s) | 35, 69 |
| BstHHI | GCGC | 3 cut(s) | 34, 68, 117 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 31, 78, 142, 145, 148, 154 |
| BstSLI | GKGCMC | 1 cut(s) | 27 |
| BstV1I | GCAGC | 4 cut(s) | 151, 154, 157, 160 |
| BsuRI | GGCC | 1 cut(s) | 25 |
| BtsIMutI | CAGTG | 1 cut(s) | 81 |
| Cac8I | GCNNGC | 1 cut(s) | 70 |
| CfoI | GCGC | 3 cut(s) | 34, 68, 117 |
| Cfr13I | GGNCC | 2 cut(s) | 23, 24 |
| CviJI | RGCY | 5 cut(s) | 25, 40, 72, 109, 157 |
| CviKI_1 | RGCY | 5 cut(s) | 25, 40, 72, 109, 157 |
| Eco24I | GRGCYC | 1 cut(s) | 27 |
| Eco57I | CTGAAG | 1 cut(s) | 95 |
| EcoO109I | RGGNCCY | 2 cut(s) | 23, 24 |
| EcoT38I | GRGCYC | 1 cut(s) | 27 |
| FauI | CCCGC | 1 cut(s) | 13 |
| Fnu4HI | GCNGC | 6 cut(s) | 137, 140, 143, 146, 149, 171 |
| FriOI | GRGCYC | 1 cut(s) | 27 |
| Fsp4HI | GCNGC | 6 cut(s) | 137, 140, 143, 146, 149, 171 |
| GlaI | GCGC | 3 cut(s) | 33, 67, 116 |
| GluI | GCNGC | 6 cut(s) | 137, 140, 143, 146, 149, 171 |
| GsaI | CCCAGC | 1 cut(s) | 32 |
| HaeII | RGCGCY | 2 cut(s) | 35, 69 |
| HaeIII | GGCC | 1 cut(s) | 25 |
| HhaI | GCGC | 3 cut(s) | 34, 68, 117 |
| Hin6I | GCGC | 3 cut(s) | 32, 66, 115 |
| HinP1I | GCGC | 3 cut(s) | 32, 66, 115 |
| HinfI | GANTC | 1 cut(s) | 90 |
| HpyAV | CCTTC | 1 cut(s) | 53 |
| HpyCH4III | ACNGT | 1 cut(s) | 85 |
| HpyCH4V | TGCA | 1 cut(s) | 81 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 31, 78, 142, 145, 148, 154 |
| HspAI | GCGC | 3 cut(s) | 32, 66, 115 |
| LmnI | GCTCC | 2 cut(s) | 45, 162 |
| LpnPI | CCDG | 3 cut(s) | 42, 54, 174 |
| Lsp1109I | GCAGC | 4 cut(s) | 151, 154, 157, 160 |
| MboII | GAAGA | 1 cut(s) | 23 |
| MhlI | GDGCHC | 1 cut(s) | 27 |
| MluCI | AATT | 1 cut(s) | 14 |
| MmeI | TCCRAC | 1 cut(s) | 67 |
| MspA1I | CMGCKG | 1 cut(s) | 136 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 31, 78, 142, 145, 148, 154 |
| NlaIV | GGNNCC | 3 cut(s) | 24, 25, 26 |
| PfeI | GAWTC | 1 cut(s) | 90 |
| PkrI | GCNGC | 6 cut(s) | 138, 141, 144, 147, 150, 172 |
| PspFI | CCCAGC | 1 cut(s) | 28 |
| PspN4I | GGNNCC | 3 cut(s) | 24, 25, 26 |
| PspOMI | GGGCCC | 1 cut(s) | 23 |
| PspPI | GGNCC | 2 cut(s) | 23, 24 |
| SatI | GCNGC | 6 cut(s) | 137, 140, 143, 146, 149, 171 |
| Sau96I | GGNCC | 2 cut(s) | 23, 24 |
| SduI | GDGCHC | 1 cut(s) | 27 |
| SetI | ASST | 3 cut(s) | 42, 111, 159 |
| SgeI | CNNG | 6 cut(s) | 33, 41, 81, 116, 130, 173 |
| SmlI | CTYRAG | 1 cut(s) | 182 |
| SmoI | CTYRAG | 1 cut(s) | 182 |
| Sse9I | AATT | 1 cut(s) | 14 |
| SsiI | CCGC | 3 cut(s) | 20, 136, 171 |
| TaaI | ACNGT | 1 cut(s) | 85 |
| TasI | AATT | 1 cut(s) | 14 |
| TauI | GCSGC | 2 cut(s) | 139, 173 |
| TfiI | GAWTC | 1 cut(s) | 90 |
| TscAI | CASTG | 1 cut(s) | 88 |
| TseI | GCWGC | 4 cut(s) | 139, 142, 145, 148 |
| TspRI | CASTG | 1 cut(s) | 88 |