Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0014079

Physical Location & Seq

Genomic Coordinates Forward (+)

11069999 .. 11072204

Gene Structure 2206 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G186300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 948 bp

ATGGGAATTCCTAAGCTTCTTGGTGTGTTTCTAGTAATGGAAATGATGAGTGGCTTCAGATTTGGAGCACATGGTTTGAGTATGGGATATTACGTTATGAGCTGCCCGATGGCTGAATTGATCGTCAGAAATTCAGTCATCAGAGCCTTGCAAGCTGATCCAACCTTAGCAGCAGGCCTAATCAGAATGCATTTCCATGACTGCTTCATAGAGGGATGTGATGCTTCAATTCTCCTAGATTCAACAAAAGACAACACAGCAGAGAAGGACTCCCCTGCAAATTTGAGCCTGAGAGGCTATGAAGTTATTGACGCTGCAAAAGAGGAGCTTGAAAAAGAATGCCCTGGCGTTGTCTCATGCGCTGACATAGTTGCAATGGCTTCTACATATGCAGTTTTTGAGGCTGGAGGTCCAGTATATGACATACCCAAAGGAAGAAAGGACGGAAGTAGGTCTAAAATACAAGACACAATCAACCTGCCTCCACCCACCTTGAATGCCTCTCAACTCATTAAAATGTTCGGGCAACATGGTTTTACTGCTCAAGAAATGGTGGCTCTATCTGGTGCACATACACTAGGTGTAGCCAGGTGCTCTTCATTCAAAAACCGATTGGTTGATGCTGTGGATCCAAACTTAGATTCAGGGTTTGCAAAGCAACTGACCAAAACCTGCAGTGCCGGGGACAATACCGAGCAGCCCTTCGACGGGACGAGAAACCATTTCGATAACCTTTACTTCAATGCACTGCAGCATAACACCGGACTGCTGGCTTCTGATCAAACTCTCTTTTCATCTGCAAGAACCAGAAACATTGTAAATGGTTATGCCTTCAACCAAGCCATGTTCTTCTTTGATTTTCAACAGGCAATGGTGAAAATGAGCATGCTGGATGTTAAGGAAGGTTTCAAAGGAGAAGTGCGACAAAACTGCCGCAAAATCAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004601 GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009636 GO:0009664 GO:0009987 GO:0016043 GO:0016209 GO:0016491 GO:0016684 GO:0030054 GO:0030312 GO:0042221 GO:0044464 GO:0045229 GO:0050896 GO:0051716 GO:0055044 GO:0055114 GO:0070887 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0071944 GO:0097237 GO:0098754 GO:0098869 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

316

Amino Acids

34.49

Weight (kDa)

5.99

Isoelectric Point (pI)

40.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014079)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33420 AT4G33420
fragaria_vesca	FvH4_3g20670 FvH4_3g20670
malus_domestica	MD03G1223300.v1.1 MD11G1241100.v1.1
prunus_persica	Prupe.4G186300_v2.0.a1
pyrus_communis	pycom03g17160 pycom11g21270
rosa_chinensis	RchiOBHm_Chr5g0034661
rosa_laevigata	RLG00000033570
rosa_multiflora	Rmu_sc0002460.1_g000077
rosa_roxburghii	Rroxscaffold_1G00045630
rosa_rugosa	Rorug05G0147700
rosa_samantha	Rh5AG240100 Rh5DG248800
rosa_wichuraiana	Rw5G021970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	486, 680
AciI	CCGC	1 cut(s)	934
AclWI	GGATC	3 cut(s)	152, 623, 636
AcsI	RAATTY	3 cut(s)	6, 130, 280
AcuI	CTGAAG	1 cut(s)	40
AdeI	CACNNNGTG	1 cut(s)	581
AfiI	CCNNNNNNNGG	2 cut(s)	707, 708
AgsI	TTSAA	9 cut(s)	228, 243, 332, 496, 604, 742, 835, 863, 910
AjnI	CCWGG	2 cut(s)	343, 587
AjuI	GAANNNNNNNTTGG	2 cut(s)	625, 657
AluBI	AGCT	4 cut(s)	16, 102, 155, 328
AluI	AGCT	4 cut(s)	16, 102, 155, 328
Alw21I	GWGCWC	3 cut(s)	70, 571, 596
Alw26I	GTCTC	1 cut(s)	358
Alw44I	GTGCAC	1 cut(s)	567
AlwI	GGATC	3 cut(s)	152, 623, 636
AoxI	GGCC	1 cut(s)	175
ApaLI	GTGCAC	1 cut(s)	567
ApeKI	GCWGC	5 cut(s)	102, 170, 314, 697, 751
ApoI	RAATTY	3 cut(s)	6, 130, 280
AspLEI	GCGC	1 cut(s)	362
AspS9I	GGNCC	1 cut(s)	410
AsuC2I	CCSGG	1 cut(s)	682
AsuHPI	GGTGA	1 cut(s)	886
AvaII	GGWCC	1 cut(s)	410
BaeGI	GKGCMC	1 cut(s)	571
BamHI	GGATCC	1 cut(s)	628
Bbv12I	GWGCWC	3 cut(s)	70, 571, 596
BbvI	GCAGC	5 cut(s)	89, 182, 301, 709, 763
BccI	CCATC	1 cut(s)	103
BcgI	CGANNNNNNTGC	2 cut(s)	912, 946
BciT130I	CCWGG	2 cut(s)	345, 589
BclI	TGATCA	1 cut(s)	778
BcnI	CCSGG	1 cut(s)	682
BcoDI	GTCTC	1 cut(s)	358
BfaI	CTAG	3 cut(s)	32, 236, 578
BfmI	CTRYAG	2 cut(s)	673, 749
BfuAI	ACCTGC	2 cut(s)	486, 680
BglI	GCCNNNNNGGC	1 cut(s)	294
BisI	GCNGC	6 cut(s)	103, 171, 315, 698, 752, 934
BlsI	GCNGC	6 cut(s)	104, 172, 316, 699, 753, 935
Bme1390I	CCNGG	3 cut(s)	345, 589, 682
Bme18I	GGWCC	1 cut(s)	410
BmgT120I	GGNCC	1 cut(s)	410
BmiI	GGNNCC	1 cut(s)	630
BmrFI	CCNGG	3 cut(s)	345, 589, 682
BmsI	GCATC	2 cut(s)	211, 610
BplI	GAGNNNNNCTC	2 cut(s)	254, 286
BpmI	CTGGAG	1 cut(s)	426
Bpu10I	CCTNAGC	2 cut(s)	12, 166
BpuEI	CTTGAG	1 cut(s)	528
BpuMI	CCSGG	1 cut(s)	682
BsaJI	CCNNGG	2 cut(s)	343, 681
BsaWI	WCCGGW	1 cut(s)	761
BsaXI	ACNNNNNCTCC	2 cut(s)	399, 429
Bsc4I	CCNNNNNNNGG	2 cut(s)	707, 708
Bse1I	ACTGG	1 cut(s)	413
Bse3DI	GCAATG	2 cut(s)	381, 876
BseBI	CCWGG	2 cut(s)	345, 589
BseDI	CCNNGG	2 cut(s)	343, 681
BseGI	GGATG	2 cut(s)	221, 898
BseLI	CCNNNNNNNGG	2 cut(s)	707, 708
BseMI	GCAATG	2 cut(s)	381, 876
BseMII	CTCAG	1 cut(s)	281
BseNI	ACTGG	1 cut(s)	413
BseRI	GAGGAG	1 cut(s)	338
BseSI	GKGCMC	1 cut(s)	571
BseXI	GCAGC	5 cut(s)	89, 182, 301, 709, 763
BshFI	GGCC	1 cut(s)	177
BsiHKAI	GWGCWC	3 cut(s)	70, 571, 596
BsiSI	CCGG	2 cut(s)	681, 762
BslFI	GGGAC	2 cut(s)	698, 724
BslI	CCNNNNNNNGG	2 cut(s)	707, 708
BsmAI	GTCTC	1 cut(s)	358
BsmFI	GGGAC	2 cut(s)	698, 724
BsmI	GAATGC	3 cut(s)	192, 344, 502
BsnI	GGCC	1 cut(s)	177
Bsp1286I	GDGCHC	3 cut(s)	70, 571, 596
Bsp143I	GATC	4 cut(s)	120, 157, 628, 778
BspACI	CCGC	1 cut(s)	934
BspANI	GGCC	1 cut(s)	177
BspCNI	CTCAG	1 cut(s)	282
BspLI	GGNNCC	1 cut(s)	630
BspMAI	CTGCAG	2 cut(s)	677, 753
BspMI	ACCTGC	2 cut(s)	486, 680
BspPI	GGATC	3 cut(s)	152, 623, 636
BspQI	GCTCTTC	1 cut(s)	601
BsrDI	GCAATG	2 cut(s)	381, 876
BsrI	ACTGG	1 cut(s)	413
BssECI	CCNNGG	2 cut(s)	343, 681
BssMI	GATC	4 cut(s)	120, 157, 628, 778
Bst2UI	CCWGG	2 cut(s)	345, 589
Bst6I	CTCTTC	1 cut(s)	601
BstC8I	GCNNGC	4 cut(s)	153, 175, 771, 887
BstDEI	CTNAG	4 cut(s)	12, 166, 290, 637
BstF5I	GGATG	2 cut(s)	221, 898
BstHHI	GCGC	1 cut(s)	362
BstKTI	GATC	4 cut(s)	123, 160, 631, 781
BstMAI	GTCTC	1 cut(s)	358
BstMBI	GATC	4 cut(s)	120, 157, 628, 778
BstMWI	GCNNNNNNNGC	2 cut(s)	152, 294
BstNI	CCWGG	2 cut(s)	345, 589
BstNSI	RCATGY	1 cut(s)	889
BstSCI	CCNGG	3 cut(s)	343, 587, 680
BstSFI	CTRYAG	2 cut(s)	673, 749
BstSLI	GKGCMC	1 cut(s)	571
BstV1I	GCAGC	5 cut(s)	89, 182, 301, 709, 763
BstX2I	RGATCY	1 cut(s)	628
BstYI	RGATCY	1 cut(s)	628
BsuRI	GGCC	1 cut(s)	177
BtsCI	GGATG	2 cut(s)	221, 898
BtsI	GCAGTG	2 cut(s)	682, 746
BtsIMutI	CAGTG	2 cut(s)	682, 746
BveI	ACCTGC	2 cut(s)	486, 680
Cac8I	GCNNGC	4 cut(s)	153, 175, 771, 887
CfoI	GCGC	1 cut(s)	362
Cfr13I	GGNCC	1 cut(s)	410
CseI	GACGC	1 cut(s)	320
CspCI	CAANNNNNGTGG	2 cut(s)	474, 509
CviAII	CATG	6 cut(s)	71, 197, 357, 530, 844, 886
DdeI	CTNAG	4 cut(s)	12, 166, 290, 637
DpnI	GATC	4 cut(s)	122, 159, 630, 780
DpnII	GATC	4 cut(s)	120, 157, 628, 778
DraIII	CACNNNGTG	1 cut(s)	581
Eam1104I	CTCTTC	1 cut(s)	601
EarI	CTCTTC	1 cut(s)	601
Eco147I	AGGCCT	1 cut(s)	177
Eco47I	GGWCC	1 cut(s)	410
Eco57I	CTGAAG	1 cut(s)	40
EcoRI	GAATTC	1 cut(s)	6
EcoRII	CCWGG	2 cut(s)	343, 587
EcoT22I	ATGCAT	1 cut(s)	192
FaeI	CATG	6 cut(s)	74, 200, 360, 533, 847, 889
FalI	AAGNNNNNCTT	2 cut(s)	312, 344
FaqI	GGGAC	2 cut(s)	698, 724
FatI	CATG	6 cut(s)	70, 196, 356, 529, 843, 885
FauNDI	CATATG	1 cut(s)	388
FbaI	TGATCA	1 cut(s)	778
Fnu4HI	GCNGC	6 cut(s)	103, 171, 315, 698, 752, 934
FokI	GGATG	2 cut(s)	228, 905
Fsp4HI	GCNGC	6 cut(s)	103, 171, 315, 698, 752, 934
FspBI	CTAG	3 cut(s)	32, 236, 578
GlaI	GCGC	1 cut(s)	361
GluI	GCNGC	6 cut(s)	103, 171, 315, 698, 752, 934
GsuI	CTGGAG	1 cut(s)	426
HaeIII	GGCC	1 cut(s)	177
HapII	CCGG	2 cut(s)	681, 762
HgaI	GACGC	1 cut(s)	320
HhaI	GCGC	1 cut(s)	362
Hin1II	CATG	6 cut(s)	74, 200, 360, 533, 847, 889
Hin6I	GCGC	1 cut(s)	360
HinP1I	GCGC	1 cut(s)	360
HindIII	AAGCTT	1 cut(s)	14
HinfI	GANTC	3 cut(s)	239, 269, 641
HpaII	CCGG	2 cut(s)	681, 762
HphI	GGTGA	1 cut(s)	886
Hpy166II	GTNNAC	1 cut(s)	569
Hpy188I	TCNGA	5 cut(s)	59, 128, 143, 185, 778
Hpy188III	TCNNGA	1 cut(s)	545
Hpy8I	GTNNAC	1 cut(s)	569
Hpy99I	CGWCG	1 cut(s)	710
HpyAV	CCTTC	4 cut(s)	259, 712, 841, 896
HpyCH4IV	ACGT	1 cut(s)	93
HpyF10VI	GCNNNNNNNGC	2 cut(s)	152, 294
HpyF3I	CTNAG	4 cut(s)	12, 166, 290, 637
HpySE526I	ACGT	1 cut(s)	93
Hsp92II	CATG	6 cut(s)	74, 200, 360, 533, 847, 889
HspAI	GCGC	1 cut(s)	360
Ksp22I	TGATCA	1 cut(s)	778
Kzo9I	GATC	4 cut(s)	120, 157, 628, 778
LguI	GCTCTTC	1 cut(s)	601
LmnI	GCTCC	2 cut(s)	65, 325
Lsp1109I	GCAGC	5 cut(s)	89, 182, 301, 709, 763
LweI	GCATC	2 cut(s)	211, 610
MaeI	CTAG	3 cut(s)	32, 236, 578
MaeII	ACGT	1 cut(s)	93
MalI	GATC	4 cut(s)	122, 159, 630, 780
MboI	GATC	4 cut(s)	120, 157, 628, 778
MboII	GAAGA	3 cut(s)	447, 588, 841
MflI	RGATCY	1 cut(s)	628
MhlI	GDGCHC	3 cut(s)	70, 571, 596
MluCI	AATT	6 cut(s)	6, 116, 130, 228, 280, 943
MlyI	GAGTC	1 cut(s)	263
MmeI	TCCRAC	1 cut(s)	185
MnlI	CCTC	7 cut(s)	205, 287, 316, 394, 401, 492, 511
Mph1103I	ATGCAT	1 cut(s)	192
MseI	TTAA	3 cut(s)	513, 897, 946
MslI	CAYNNNNRTG	2 cut(s)	195, 515
MspI	CCGG	2 cut(s)	681, 762
MspR9I	CCNGG	3 cut(s)	345, 589, 682
Mva1269I	GAATGC	3 cut(s)	192, 344, 502
MvaI	CCWGG	2 cut(s)	345, 589
MwoI	GCNNNNNNNGC	2 cut(s)	152, 294
NciI	CCSGG	1 cut(s)	682
NdeI	CATATG	1 cut(s)	388
NdeII	GATC	4 cut(s)	120, 157, 628, 778
NlaIII	CATG	6 cut(s)	74, 200, 360, 533, 847, 889
NlaIV	GGNNCC	1 cut(s)	630
NsiI	ATGCAT	1 cut(s)	192
NspI	RCATGY	1 cut(s)	889
PaeI	GCATGC	1 cut(s)	889
PceI	AGGCCT	1 cut(s)	177
PciSI	GCTCTTC	1 cut(s)	601
PctI	GAATGC	3 cut(s)	192, 344, 502
PfeI	GAWTC	2 cut(s)	239, 641
PkrI	GCNGC	6 cut(s)	104, 172, 316, 699, 753, 935
PleI	GAGTC	1 cut(s)	263
PpsI	GAGTC	1 cut(s)	263
Psp6I	CCWGG	2 cut(s)	343, 587
PspGI	CCWGG	2 cut(s)	343, 587
PspN4I	GGNNCC	1 cut(s)	630
PspPI	GGNCC	1 cut(s)	410
PstI	CTGCAG	2 cut(s)	677, 753
PsuI	RGATCY	1 cut(s)	628
RseI	CAYNNNNRTG	2 cut(s)	195, 515
SapI	GCTCTTC	1 cut(s)	601
SaqAI	TTAA	3 cut(s)	513, 897, 946
SatI	GCNGC	6 cut(s)	103, 171, 315, 698, 752, 934
Sau3AI	GATC	4 cut(s)	120, 157, 628, 778
Sau96I	GGNCC	1 cut(s)	410
SchI	GAGTC	1 cut(s)	263
ScrFI	CCNGG	3 cut(s)	345, 589, 682
SduI	GDGCHC	3 cut(s)	70, 571, 596
SfaNI	GCATC	2 cut(s)	211, 610
SfcI	CTRYAG	2 cut(s)	673, 749
SinI	GGWCC	1 cut(s)	410
SmiMI	CAYNNNNRTG	2 cut(s)	195, 515
SmlI	CTYRAG	1 cut(s)	543
SmoI	CTYRAG	1 cut(s)	543
SphI	GCATGC	1 cut(s)	889
Sse9I	AATT	6 cut(s)	6, 116, 130, 228, 280, 943
SseBI	AGGCCT	1 cut(s)	177
SsiI	CCGC	1 cut(s)	934
SspMI	CTAG	3 cut(s)	32, 236, 578
StuI	AGGCCT	1 cut(s)	177
StyD4I	CCNGG	3 cut(s)	343, 587, 680
TaiI	ACGT	1 cut(s)	96
TaqI	TCGA	2 cut(s)	705, 726
TasI	AATT	6 cut(s)	6, 116, 130, 228, 280, 943
TauI	GCSGC	1 cut(s)	936
TfiI	GAWTC	2 cut(s)	239, 641
Tru1I	TTAA	3 cut(s)	513, 897, 946
Tru9I	TTAA	3 cut(s)	513, 897, 946
TscAI	CASTG	2 cut(s)	682, 753
TseI	GCWGC	5 cut(s)	102, 170, 314, 697, 751
TspDTI	ATGAA	4 cut(s)	196, 315, 588, 783
TspGWI	ACGGA	1 cut(s)	459
TspRI	CASTG	2 cut(s)	682, 753
VneI	GTGCAC	1 cut(s)	567
VpaK11BI	GGWCC	1 cut(s)	410
XapI	RAATTY	3 cut(s)	6, 130, 280
XceI	RCATGY	1 cut(s)	889
XspI	CTAG	3 cut(s)	32, 236, 578
Zsp2I	ATGCAT	1 cut(s)	192

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.