Prupe.4G210000_v2.0.a1

Pollen proteins Ole e I like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0016113
Physical Location & Seq
Forward (+)
13099878 .. 13102649
2772 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G210000.1

Sequence Viewer

Length: 444 bp
ATGGAAGCACAGCAGAAGAAGCAGCTGGTGACGGTGGGTCTTCTTATCTTTACAGTCTTTATTTCTGGTGTCGGAGCTTGGACTGGTGAAATCCATGGCAGAGTTGTTTGTGATGTCTGTGGTGACTCCGCCGTTGGACCTGAAGATCATGTTCTAGAAGGTGCTGAGGTAGCTGTTCTATGCATTACAAAATCAGGGGAAGTTCTAAATTACCAGGCATTCACGAATGATAAGGGGATATATACAGTGGCAGAGACAATGCCTGAGAGCGACCGCTGGGATGCATGCCTGGCCCGGCCCATCAGCAGCTTCCATGAGCATTGCACTCATGTAGGGGATGGTAGCTCAGGAGTAAAGTTCAGTTATAATCACCCATCAGGCTATTCGCACACCGTCAGAACTTTCGTCTATCGACAAGCAAGTGTACCAGCATACTGCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pollen_Ole_e_I

Protein Analysis

148

Amino Acids

15.96

Weight (kDa)

5.54

Isoelectric Point (pI)

31.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G54855
fragaria_vesca FvH4_3g22360
malus_domestica MD03G1206100.v1.1 MD11G1221600.v1.1
prunus_persica Prupe.4G210000_v2.0.a1
pyrus_communis pycom11g19530
rosa_chinensis RchiOBHm_Chr5g0038891
rosa_laevigata RLG00000033879
rosa_multiflora Rmu_sc0000533.1_g000083
rosa_roxburghii Rroxscaffold_1G00042130
rosa_rugosa Rorug05G0174900
rosa_samantha Rh5BG266400 Rh5CG299400 Rh5DG273300
rosa_wichuraiana Rw5G024440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 366
AciI CCGC 2 cut(s) 129, 274
AcuI CTGAAG 1 cut(s) 162
AfaI GTAC 1 cut(s) 426
AhdI GACNNNNNGTC 1 cut(s) 36
AjnI CCWGG 2 cut(s) 213, 288
AluBI AGCT 5 cut(s) 25, 77, 173, 309, 345
AluI AGCT 5 cut(s) 25, 77, 173, 309, 345
Alw26I GTCTC 1 cut(s) 248
AoxI GGCC 2 cut(s) 291, 296
ApeKI GCWGC 2 cut(s) 22, 306
AspS9I GGNCC 3 cut(s) 137, 292, 297
AsuC2I CCSGG 1 cut(s) 295
AsuHPI GGTGA 4 cut(s) 40, 98, 134, 362
AvaII GGWCC 1 cut(s) 137
BbsI GAAGAC 1 cut(s) 32
BbvCI CCTCAGC 1 cut(s) 165
BbvI GCAGC 2 cut(s) 34, 318
BccI CCATC 3 cut(s) 308, 332, 382
BceAI ACGGC 1 cut(s) 116
BciT130I CCWGG 2 cut(s) 215, 290
BcnI CCSGG 1 cut(s) 295
BcoDI GTCTC 1 cut(s) 248
BfaI CTAG 1 cut(s) 155
BisI GCNGC 2 cut(s) 23, 307
BlsI GCNGC 2 cut(s) 24, 308
Bme1390I CCNGG 3 cut(s) 215, 290, 295
Bme18I GGWCC 1 cut(s) 137
BmeRI GACNNNNNGTC 1 cut(s) 36
BmgT120I GGNCC 3 cut(s) 137, 292, 297
BmrFI CCNGG 3 cut(s) 215, 290, 295
BmsI GCATC 1 cut(s) 271
BpiI GAAGAC 1 cut(s) 32
Bpu10I CCTNAGC 2 cut(s) 165, 346
BpuMI CCSGG 1 cut(s) 295
BsaJI CCNNGG 1 cut(s) 94
Bse1I ACTGG 1 cut(s) 88
Bse3DI GCAATG 1 cut(s) 319
BseBI CCWGG 2 cut(s) 215, 290
BseDI CCNNGG 1 cut(s) 94
BseGI GGATG 2 cut(s) 286, 343
BseMI GCAATG 1 cut(s) 319
BseMII CTCAG 3 cut(s) 156, 255, 360
BseNI ACTGG 1 cut(s) 88
BseXI GCAGC 2 cut(s) 34, 318
BseYI CCCAGC 1 cut(s) 276
Bsh1285I CGRYCG 1 cut(s) 274
BshFI GGCC 2 cut(s) 293, 298
BsiEI CGRYCG 1 cut(s) 274
BsiSI CCGG 1 cut(s) 295
BsmAI GTCTC 1 cut(s) 248
BsmI GAATGC 1 cut(s) 218
BsnI GGCC 2 cut(s) 293, 298
Bsp143I GATC 1 cut(s) 145
Bsp19I CCATGG 1 cut(s) 94
BspACI CCGC 2 cut(s) 129, 274
BspANI GGCC 2 cut(s) 293, 298
BspCNI CTCAG 3 cut(s) 157, 256, 359
BsrDI GCAATG 1 cut(s) 319
BsrI ACTGG 1 cut(s) 88
BssECI CCNNGG 1 cut(s) 94
BssMI GATC 1 cut(s) 145
BssT1I CCWWGG 1 cut(s) 94
Bst2UI CCWGG 2 cut(s) 215, 290
Bst4CI ACNGT 4 cut(s) 34, 55, 247, 394
BstC8I GCNNGC 1 cut(s) 286
BstDEI CTNAG 3 cut(s) 165, 264, 346
BstDSI CCRYGG 1 cut(s) 94
BstF5I GGATG 2 cut(s) 286, 343
BstKTI GATC 1 cut(s) 148
BstMAI GTCTC 1 cut(s) 248
BstMBI GATC 1 cut(s) 145
BstMCI CGRYCG 1 cut(s) 274
BstMWI GCNNNNNNNGC 3 cut(s) 19, 170, 290
BstNI CCWGG 2 cut(s) 215, 290
BstNSI RCATGY 1 cut(s) 288
BstSCI CCNGG 3 cut(s) 213, 288, 293
BstV1I GCAGC 2 cut(s) 34, 318
BstV2I GAAGAC 1 cut(s) 32
BsuRI GGCC 2 cut(s) 293, 298
BtgI CCRYGG 1 cut(s) 94
BtsCI GGATG 2 cut(s) 286, 343
BtsIMutI CAGTG 1 cut(s) 252
Cac8I GCNNGC 1 cut(s) 286
Cfr13I GGNCC 3 cut(s) 137, 292, 297
Csp6I GTAC 1 cut(s) 425
CviAII CATG 5 cut(s) 95, 149, 285, 314, 329
CviJI RGCY 8 cut(s) 25, 77, 173, 293, 298, 309, 345, 381
CviKI_1 RGCY 8 cut(s) 25, 77, 173, 293, 298, 309, 345, 381
CviQI GTAC 1 cut(s) 425
DdeI CTNAG 3 cut(s) 165, 264, 346
DpnI GATC 1 cut(s) 147
DpnII GATC 1 cut(s) 145
DriI GACNNNNNGTC 1 cut(s) 36
Eam1105I GACNNNNNGTC 1 cut(s) 36
EciI GGCGGA 1 cut(s) 118
Eco130I CCWWGG 1 cut(s) 94
Eco47I GGWCC 1 cut(s) 137
Eco57I CTGAAG 1 cut(s) 162
EcoRII CCWGG 2 cut(s) 213, 288
EcoT14I CCWWGG 1 cut(s) 94
EcoT22I ATGCAT 2 cut(s) 185, 286
ErhI CCWWGG 1 cut(s) 94
FaeI CATG 5 cut(s) 98, 152, 288, 317, 332
FatI CATG 5 cut(s) 94, 148, 284, 313, 328
Fnu4HI GCNGC 2 cut(s) 23, 307
FokI GGATG 2 cut(s) 293, 350
Fsp4HI GCNGC 2 cut(s) 23, 307
FspBI CTAG 1 cut(s) 155
GluI GCNGC 2 cut(s) 23, 307
GsaI CCCAGC 1 cut(s) 280
HaeIII GGCC 2 cut(s) 293, 298
HapII CCGG 1 cut(s) 295
Hin1II CATG 5 cut(s) 98, 152, 288, 317, 332
HinfI GANTC 1 cut(s) 125
HpaII CCGG 1 cut(s) 295
HphI GGTGA 4 cut(s) 40, 98, 134, 362
Hpy166II GTNNAC 1 cut(s) 425
Hpy188I TCNGA 2 cut(s) 74, 398
Hpy188III TCNNGA 3 cut(s) 155, 223, 348
Hpy8I GTNNAC 1 cut(s) 425
HpyAV CCTTC 1 cut(s) 152
HpyCH4III ACNGT 4 cut(s) 34, 55, 247, 394
HpyCH4V TGCA 4 cut(s) 183, 284, 324, 438
HpyF10VI GCNNNNNNNGC 3 cut(s) 19, 170, 290
HpyF3I CTNAG 3 cut(s) 165, 264, 346
Hsp92II CATG 5 cut(s) 98, 152, 288, 317, 332
Kzo9I GATC 1 cut(s) 145
LmnI GCTCC 1 cut(s) 74
Lsp1109I GCAGC 2 cut(s) 34, 318
LweI GCATC 1 cut(s) 271
MaeI CTAG 1 cut(s) 155
MaeIII GTNAC 2 cut(s) 28, 122
MalI GATC 1 cut(s) 147
MboI GATC 1 cut(s) 145
MboII GAAGA 3 cut(s) 28, 32, 155
MluCI AATT 1 cut(s) 208
MlyI GAGTC 1 cut(s) 119
MmeI TCCRAC 2 cut(s) 52, 115
MnlI CCTC 1 cut(s) 160
Mph1103I ATGCAT 2 cut(s) 185, 286
MspA1I CMGCKG 2 cut(s) 25, 276
MspI CCGG 1 cut(s) 295
MspR9I CCNGG 3 cut(s) 215, 290, 295
Mva1269I GAATGC 1 cut(s) 218
MvaI CCWGG 2 cut(s) 215, 290
MwoI GCNNNNNNNGC 3 cut(s) 19, 170, 290
NciI CCSGG 1 cut(s) 295
NcoI CCATGG 1 cut(s) 94
NdeII GATC 1 cut(s) 145
NlaIII CATG 5 cut(s) 98, 152, 288, 317, 332
NmuCI GTSAC 2 cut(s) 28, 122
NsiI ATGCAT 2 cut(s) 185, 286
NspI RCATGY 1 cut(s) 288
PaeI GCATGC 1 cut(s) 288
PctI GAATGC 1 cut(s) 218
PkrI GCNGC 2 cut(s) 24, 308
PleI GAGTC 1 cut(s) 119
PpsI GAGTC 1 cut(s) 119
PsiI TTATAA 1 cut(s) 366
Psp6I CCWGG 2 cut(s) 213, 288
PspFI CCCAGC 1 cut(s) 276
PspGI CCWGG 2 cut(s) 213, 288
PspPI GGNCC 3 cut(s) 137, 292, 297
PvuII CAGCTG 1 cut(s) 25
RsaI GTAC 1 cut(s) 426
RsaNI GTAC 1 cut(s) 425
SatI GCNGC 2 cut(s) 23, 307
Sau3AI GATC 1 cut(s) 145
Sau96I GGNCC 3 cut(s) 137, 292, 297
SchI GAGTC 1 cut(s) 119
ScrFI CCNGG 3 cut(s) 215, 290, 295
SetI ASST 8 cut(s) 27, 79, 142, 163, 171, 175, 311, 347
SfaNI GCATC 1 cut(s) 271
SinI GGWCC 1 cut(s) 137
SphI GCATGC 1 cut(s) 288
Sse9I AATT 1 cut(s) 208
SsiI CCGC 2 cut(s) 129, 274
SspMI CTAG 1 cut(s) 155
StyD4I CCNGG 3 cut(s) 213, 288, 293
StyI CCWWGG 1 cut(s) 94
TaaI ACNGT 4 cut(s) 34, 55, 247, 394
TaqI TCGA 1 cut(s) 412
TasI AATT 1 cut(s) 208
TscAI CASTG 1 cut(s) 252
TseFI GTSAC 2 cut(s) 28, 122
TseI GCWGC 2 cut(s) 22, 306
Tsp45I GTSAC 2 cut(s) 28, 122
TspRI CASTG 1 cut(s) 252
VpaK11BI GGWCC 1 cut(s) 137
XbaI TCTAGA 1 cut(s) 154
XceI RCATGY 1 cut(s) 288
XspI CTAG 1 cut(s) 155
Zsp2I ATGCAT 2 cut(s) 185, 286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.