Prupe.4G211200_v2.0.a1

UPF0136 membrane protein At2g26240-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
13168980 .. 13171921
2942 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G211200.1

Sequence Viewer

Length: 360 bp
ATGCACGATTTCTGCTTCACGATCCCGTACGGGTTGCTGCTGATCGGTGGAGGATTATTTGGGTACTTTAGGAAGGGGAGCACAGCTTCTTTGGCTGGAGGTGTGGGCATTGGTTTGCTTCTCACTCTTGCCGGCTATTTCAGTCTCAAAGCCTTTGAGAGGAAGAAGAACTCGTACCCTGCTTTGATTCTTGAAACGGTTTGTGCTGCCATACTCACGTGGGTCATGGGACAGCGCTACATGCAAACTTCTAAGTTCATGCCAGCTGGTGTTGTTGCTGGCATCAGTGCCCTCATGACTGGATTTTATCTCTACAAAATTGCAACTGGAGGGAACCATATTCCAGCCAAGACTAAGTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

120

Amino Acids

12.75

Weight (kDa)

9.74

Isoelectric Point (pI)

28.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014470)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 16
AcvI CACGTG 1 cut(s) 219
AfaI GTAC 3 cut(s) 29, 65, 176
AfeI AGCGCT 1 cut(s) 236
AfiI CCNNNNNNNGG 1 cut(s) 159
AgsI TTSAA 1 cut(s) 194
AluBI AGCT 2 cut(s) 86, 266
AluI AGCT 2 cut(s) 86, 266
Alw21I GWGCWC 1 cut(s) 83
Alw26I GTCTC 1 cut(s) 149
AlwI GGATC 1 cut(s) 16
Aor51HI AGCGCT 1 cut(s) 236
ApeKI GCWGC 2 cut(s) 37, 206
AspLEI GCGC 1 cut(s) 237
BaeGI GKGCMC 1 cut(s) 292
BarI GAAGNNNNNNTAC 2 cut(s) 158, 190
BbrPI CACGTG 1 cut(s) 219
Bbv12I GWGCWC 1 cut(s) 83
BbvI GCAGC 2 cut(s) 24, 193
BcoDI GTCTC 1 cut(s) 149
BfoI RGCGCY 1 cut(s) 238
BisI GCNGC 2 cut(s) 38, 207
BlsI GCNGC 2 cut(s) 39, 208
BmiI GGNNCC 1 cut(s) 335
BmsI GCATC 1 cut(s) 291
BpmI CTGGAG 2 cut(s) 117, 348
BsaAI YACGTR 1 cut(s) 219
Bsc4I CCNNNNNNNGG 1 cut(s) 159
Bse118I RCCGGY 1 cut(s) 131
Bse1I ACTGG 2 cut(s) 304, 331
BseLI CCNNNNNNNGG 1 cut(s) 159
BseNI ACTGG 2 cut(s) 304, 331
BseSI GKGCMC 1 cut(s) 292
BseXI GCAGC 2 cut(s) 24, 193
BsiHKAI GWGCWC 1 cut(s) 83
BsiSI CCGG 1 cut(s) 132
BsiWI CGTACG 1 cut(s) 27
BslFI GGGAC 1 cut(s) 243
BslI CCNNNNNNNGG 1 cut(s) 159
BsmAI GTCTC 1 cut(s) 149
BsmFI GGGAC 1 cut(s) 243
Bsp1286I GDGCHC 2 cut(s) 83, 292
Bsp143I GATC 2 cut(s) 21, 42
BspHI TCATGA 1 cut(s) 294
BspLI GGNNCC 1 cut(s) 335
BspPI GGATC 1 cut(s) 16
BsrFI RCCGGY 1 cut(s) 131
BsrI ACTGG 2 cut(s) 304, 331
BssAI RCCGGY 1 cut(s) 131
BssMI GATC 2 cut(s) 21, 42
Bst4CI ACNGT 1 cut(s) 199
BstBAI YACGTR 1 cut(s) 219
BstC8I GCNNGC 3 cut(s) 133, 264, 280
BstDEI CTNAG 2 cut(s) 252, 354
BstENI CCTNNNNNAGG 1 cut(s) 157
BstH2I RGCGCY 1 cut(s) 238
BstHHI GCGC 1 cut(s) 237
BstKTI GATC 2 cut(s) 24, 45
BstMAI GTCTC 1 cut(s) 149
BstMBI GATC 2 cut(s) 21, 42
BstMWI GCNNNNNNNGC 2 cut(s) 92, 241
BstNSI RCATGY 1 cut(s) 244
BstSLI GKGCMC 1 cut(s) 292
BstV1I GCAGC 2 cut(s) 24, 193
BtsIMutI CAGTG 1 cut(s) 292
Cac8I GCNNGC 3 cut(s) 133, 264, 280
CciI TCATGA 1 cut(s) 294
CfoI GCGC 1 cut(s) 237
Cfr10I RCCGGY 1 cut(s) 131
Csp6I GTAC 3 cut(s) 28, 64, 175
CviAII CATG 4 cut(s) 226, 241, 259, 295
CviJI RGCY 6 cut(s) 86, 95, 135, 152, 266, 347
CviKI_1 RGCY 6 cut(s) 86, 95, 135, 152, 266, 347
CviQI GTAC 3 cut(s) 28, 64, 175
DdeI CTNAG 2 cut(s) 252, 354
DpnI GATC 2 cut(s) 23, 44
DpnII GATC 2 cut(s) 21, 42
Eco47III AGCGCT 1 cut(s) 236
Eco72I CACGTG 1 cut(s) 219
EcoNI CCTNNNNNAGG 1 cut(s) 157
FaeI CATG 4 cut(s) 229, 244, 262, 298
FaiI YATR 6 cut(s) 212, 227, 242, 260, 296, 339
FaqI GGGAC 1 cut(s) 243
FatI CATG 4 cut(s) 225, 240, 258, 294
Fnu4HI GCNGC 2 cut(s) 38, 207
Fsp4HI GCNGC 2 cut(s) 38, 207
GlaI GCGC 1 cut(s) 236
GluI GCNGC 2 cut(s) 38, 207
GsuI CTGGAG 2 cut(s) 117, 348
HaeII RGCGCY 1 cut(s) 238
HapII CCGG 1 cut(s) 132
HhaI GCGC 1 cut(s) 237
Hin1II CATG 4 cut(s) 229, 244, 262, 298
Hin6I GCGC 1 cut(s) 235
HinP1I GCGC 1 cut(s) 235
HinfI GANTC 1 cut(s) 187
HpaII CCGG 1 cut(s) 132
Hpy188III TCNNGA 3 cut(s) 19, 191, 295
HpyAV CCTTC 1 cut(s) 67
HpyCH4III ACNGT 1 cut(s) 199
HpyCH4IV ACGT 1 cut(s) 218
HpyCH4V TGCA 3 cut(s) 4, 244, 323
HpyF10VI GCNNNNNNNGC 2 cut(s) 92, 241
HpyF3I CTNAG 2 cut(s) 252, 354
HpySE526I ACGT 1 cut(s) 218
Hsp92II CATG 4 cut(s) 229, 244, 262, 298
HspAI GCGC 1 cut(s) 235
KroI GCCGGC 1 cut(s) 131
KroNI GCCGGC 1 cut(s) 133
Kzo9I GATC 2 cut(s) 21, 42
LmnI GCTCC 1 cut(s) 78
LpnPI CCDG 8 cut(s) 81, 145, 192, 252, 264, 276, 285, 312
Lsp1109I GCAGC 2 cut(s) 24, 193
LweI GCATC 1 cut(s) 291
MaeII ACGT 1 cut(s) 218
MalI GATC 2 cut(s) 23, 44
MboI GATC 2 cut(s) 21, 42
MboII GAAGA 2 cut(s) 175, 178
MhlI GDGCHC 2 cut(s) 83, 292
MluCI AATT 1 cut(s) 318
MnlI CCTC 5 cut(s) 44, 92, 153, 302, 323
MroNI GCCGGC 1 cut(s) 131
MspA1I CMGCKG 1 cut(s) 266
MspI CCGG 1 cut(s) 132
MwoI GCNNNNNNNGC 2 cut(s) 92, 241
NaeI GCCGGC 1 cut(s) 133
NdeII GATC 2 cut(s) 21, 42
NgoMIV GCCGGC 1 cut(s) 131
NlaIII CATG 4 cut(s) 229, 244, 262, 298
NlaIV GGNNCC 1 cut(s) 335
NspI RCATGY 1 cut(s) 244
PagI TCATGA 1 cut(s) 294
PdiI GCCGGC 1 cut(s) 133
PfeI GAWTC 1 cut(s) 187
Pfl23II CGTACG 1 cut(s) 27
PkrI GCNGC 2 cut(s) 39, 208
PmaCI CACGTG 1 cut(s) 219
PmlI CACGTG 1 cut(s) 219
Ppu21I YACGTR 1 cut(s) 219
PspCI CACGTG 1 cut(s) 219
PspLI CGTACG 1 cut(s) 27
PspN4I GGNNCC 1 cut(s) 335
PvuII CAGCTG 1 cut(s) 266
RsaI GTAC 3 cut(s) 29, 65, 176
RsaNI GTAC 3 cut(s) 28, 64, 175
SatI GCNGC 2 cut(s) 38, 207
Sau3AI GATC 2 cut(s) 21, 42
SduI GDGCHC 2 cut(s) 83, 292
SetI ASST 4 cut(s) 88, 103, 221, 268
SfaNI GCATC 1 cut(s) 291
Sse9I AATT 1 cut(s) 318
TaaI ACNGT 1 cut(s) 199
TaiI ACGT 1 cut(s) 221
TasI AATT 1 cut(s) 318
TfiI GAWTC 1 cut(s) 187
TscAI CASTG 1 cut(s) 292
TseI GCWGC 2 cut(s) 37, 206
TspDTI ATGAA 1 cut(s) 247
TspRI CASTG 1 cut(s) 292
XagI CCTNNNNNAGG 1 cut(s) 157
XceI RCATGY 1 cut(s) 244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.