Prupe.5G021700_v2.0.a1

Protein of unknown function (DUF3464)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
2398720 .. 2400338
1619 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G021700.1

Sequence Viewer

Length: 657 bp
ATGGCTGCAATTGCAGGGCTATCTTCATGGTCATCCAAGCCCTCTCCAATTAGTCCCTCGCAACACCAAGCATCATCAAGTAAGATTAGTATTAAGCCTTGGACTTTCTCCATCACCAACAGTTTGAAAGAAATAACAAAAACCCACTACCCAATCTCTACAACAGACCAAAACCAGAAGTTTTTTTCTCCCTCCACACACTTAAATGCAACCTTGAGGAGCCCAAGAGGCTTTGGCCCTTCCCCAAAGAAAAAGAAAAAGACCAAGAAGAACACTAACCAAGACAATGACAGCGATGAAGATGACGATGAGGACGAGGAAGAGGACGAGCGGGAGGAAGGCGTAATACCGGAGATCGTGACAAACAGGATGATTGGGAGGATGGGGTTCACAGTTGGGGTGCCATTGTTTCTGGGGCTCTTGTTCTTCCCATTCTTCTACTACTTGAAAGTGGGCCTGAAAATAGATGTGCCCACTTGGGTGCCCTTCATAGTGTCGTTTGTGTTCTTTGGGACGGCCCTTTTTGGGGTCAGCTATGGGATTGTGTCCTCCAGTTGGGATCCTTTGAGGGAAGGCTCCCTCTTGGGTTGGAATGAGGCTCAGAAGAATTGGCCTGTGTTTTGGCAGTCCCTTCGCGGTGGATCTAAAAAGGACTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

219

Amino Acids

24.48

Weight (kDa)

7.87

Isoelectric Point (pI)

47.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015437)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G19100 AT4G19100
fragaria_vesca FvH4_5g23870
malus_domestica MD06G1014500.v1.1
prunus_persica Prupe.5G021700_v2.0.a1
pyrus_communis pycom06g01160
rosa_chinensis RchiOBHm_Chr7g0213261
rosa_laevigata RLG00000002817
rosa_multiflora Rmu_ssc0000084.1_g000025
rosa_roxburghii Rroxscaffold_3G00246130
rosa_rugosa Rorug07G0140900
rosa_samantha Rh7AG272400 Rh7BG268100 Rh7CG291800 Rh7DG280300
rosa_wichuraiana Rw7G023640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 400, 481
AccBSI CCGCTC 1 cut(s) 331
AccII CGCG 1 cut(s) 636
AciI CCGC 2 cut(s) 331, 636
AclWI GGATC 3 cut(s) 554, 567, 649
AfiI CCNNNNNNNGG 3 cut(s) 525, 526, 555
AgsI TTSAA 2 cut(s) 127, 448
AleI CACNNNNGTG 1 cut(s) 479
AluBI AGCT 1 cut(s) 534
AluI AGCT 1 cut(s) 534
AlwI GGATC 3 cut(s) 554, 567, 649
AoxI GGCC 4 cut(s) 235, 454, 516, 611
ApeKI GCWGC 1 cut(s) 5
AspS9I GGNCC 3 cut(s) 236, 454, 517
AsuHPI GGTGA 1 cut(s) 106
BaeGI GKGCMC 2 cut(s) 474, 486
BamHI GGATCC 1 cut(s) 559
BanI GGYRCC 2 cut(s) 400, 481
BanII GRGCYC 2 cut(s) 224, 420
BarI GAAGNNNNNNTAC 2 cut(s) 330, 362
BccI CCATC 2 cut(s) 119, 376
BceAI ACGGC 1 cut(s) 531
BcgI CGANNNNNNTGC 2 cut(s) 614, 648
BglI GCCNNNNNGGC 1 cut(s) 228
BisI GCNGC 1 cut(s) 6
BlsI GCNGC 1 cut(s) 7
BmgT120I GGNCC 3 cut(s) 236, 454, 517
BmiI GGNNCC 5 cut(s) 221, 402, 483, 561, 577
BmsI GCATC 1 cut(s) 80
BpmI CTGGAG 1 cut(s) 535
BpuEI CTTGAG 1 cut(s) 235
BsaJI CCNNGG 1 cut(s) 98
BsaWI WCCGGW 1 cut(s) 349
Bsc4I CCNNNNNNNGG 3 cut(s) 525, 526, 555
Bse1I ACTGG 1 cut(s) 552
BseDI CCNNGG 1 cut(s) 98
BseGI GGATG 3 cut(s) 32, 375, 387
BseLI CCNNNNNNNGG 3 cut(s) 525, 526, 555
BseMII CTCAG 1 cut(s) 614
BseNI ACTGG 1 cut(s) 552
BseRI GAGGAG 1 cut(s) 232
BseSI GKGCMC 2 cut(s) 474, 486
Bsh1236I CGCG 1 cut(s) 636
BshFI GGCC 4 cut(s) 237, 456, 518, 613
BshNI GGYRCC 2 cut(s) 400, 481
BsiSI CCGG 1 cut(s) 350
BslFI GGGAC 3 cut(s) 39, 526, 613
BslI CCNNNNNNNGG 3 cut(s) 525, 526, 555
BsmFI GGGAC 3 cut(s) 39, 526, 613
BsnI GGCC 4 cut(s) 237, 456, 518, 613
Bsp1286I GDGCHC 4 cut(s) 224, 420, 474, 486
Bsp143I GATC 3 cut(s) 354, 559, 641
BspACI CCGC 2 cut(s) 331, 636
BspANI GGCC 4 cut(s) 237, 456, 518, 613
BspCNI CTCAG 1 cut(s) 613
BspFNI CGCG 1 cut(s) 636
BspLI GGNNCC 5 cut(s) 221, 402, 483, 561, 577
BspPI GGATC 3 cut(s) 554, 567, 649
BspT107I GGYRCC 2 cut(s) 400, 481
BsrBI CCGCTC 1 cut(s) 331
BsrI ACTGG 1 cut(s) 552
BssECI CCNNGG 1 cut(s) 98
BssMI GATC 3 cut(s) 354, 559, 641
BssT1I CCWWGG 1 cut(s) 98
Bst4CI ACNGT 2 cut(s) 122, 394
Bst6I CTCTTC 1 cut(s) 315
BstDEI CTNAG 1 cut(s) 600
BstF5I GGATG 3 cut(s) 32, 375, 387
BstFNI CGCG 1 cut(s) 636
BstKTI GATC 3 cut(s) 357, 562, 644
BstMBI GATC 3 cut(s) 354, 559, 641
BstMWI GCNNNNNNNGC 2 cut(s) 11, 228
BstSLI GKGCMC 2 cut(s) 474, 486
BstUI CGCG 1 cut(s) 636
BstX2I RGATCY 2 cut(s) 559, 641
BstYI RGATCY 2 cut(s) 559, 641
BsuRI GGCC 4 cut(s) 237, 456, 518, 613
BtgZI GCGATG 1 cut(s) 309
BtsCI GGATG 3 cut(s) 32, 375, 387
Cfr13I GGNCC 3 cut(s) 236, 454, 517
CviAII CATG 1 cut(s) 27
DdeI CTNAG 1 cut(s) 600
DpnI GATC 3 cut(s) 356, 561, 643
DpnII GATC 3 cut(s) 354, 559, 641
Eam1104I CTCTTC 1 cut(s) 315
EarI CTCTTC 1 cut(s) 315
Eco130I CCWWGG 1 cut(s) 98
Eco24I GRGCYC 2 cut(s) 224, 420
EcoT14I CCWWGG 1 cut(s) 98
EcoT38I GRGCYC 2 cut(s) 224, 420
ErhI CCWWGG 1 cut(s) 98
FaeI CATG 1 cut(s) 30
FaiI YATR 3 cut(s) 28, 491, 537
FaqI GGGAC 3 cut(s) 39, 526, 613
FatI CATG 1 cut(s) 26
FauI CCCGC 1 cut(s) 324
Fnu4HI GCNGC 1 cut(s) 6
FokI GGATG 3 cut(s) 19, 382, 394
FriOI GRGCYC 2 cut(s) 224, 420
Fsp4HI GCNGC 1 cut(s) 6
GluI GCNGC 1 cut(s) 6
GsuI CTGGAG 1 cut(s) 535
HaeIII GGCC 4 cut(s) 237, 456, 518, 613
HapII CCGG 1 cut(s) 350
Hin1II CATG 1 cut(s) 30
HpaII CCGG 1 cut(s) 350
HphI GGTGA 1 cut(s) 106
Hpy166II GTNNAC 1 cut(s) 390
Hpy188I TCNGA 1 cut(s) 603
Hpy188III TCNNGA 1 cut(s) 358
Hpy8I GTNNAC 1 cut(s) 390
HpyAV CCTTC 5 cut(s) 249, 332, 496, 566, 641
HpyCH4III ACNGT 2 cut(s) 122, 394
HpyCH4V TGCA 3 cut(s) 8, 14, 209
HpyF10VI GCNNNNNNNGC 2 cut(s) 11, 228
HpyF3I CTNAG 1 cut(s) 600
Hsp92II CATG 1 cut(s) 30
Kzo9I GATC 3 cut(s) 354, 559, 641
LmnI GCTCC 2 cut(s) 219, 581
LpnPI CCDG 7 cut(s) 188, 352, 363, 398, 470, 565, 627
LweI GCATC 1 cut(s) 80
MaeIII GTNAC 1 cut(s) 358
MalI GATC 3 cut(s) 356, 561, 643
MbiI CCGCTC 1 cut(s) 331
MboI GATC 3 cut(s) 354, 559, 641
MboII GAAGA 7 cut(s) 15, 280, 311, 332, 418, 427, 616
MfeI CAATTG 1 cut(s) 9
MflI RGATCY 2 cut(s) 559, 641
MhlI GDGCHC 4 cut(s) 224, 420, 474, 486
MluCI AATT 3 cut(s) 9, 48, 607
MmeI TCCRAC 1 cut(s) 569
MseI TTAA 2 cut(s) 93, 203
MslI CAYNNNNRTG 2 cut(s) 204, 479
MspI CCGG 1 cut(s) 350
MunI CAATTG 1 cut(s) 9
MvnI CGCG 1 cut(s) 636
MwoI GCNNNNNNNGC 2 cut(s) 11, 228
NdeII GATC 3 cut(s) 354, 559, 641
NlaIII CATG 1 cut(s) 30
NlaIV GGNNCC 5 cut(s) 221, 402, 483, 561, 577
NmuCI GTSAC 1 cut(s) 358
OliI CACNNNNGTG 1 cut(s) 479
PcsI WCGNNNNNNNCGW 1 cut(s) 312
PkrI GCNGC 1 cut(s) 7
PspN4I GGNNCC 5 cut(s) 221, 402, 483, 561, 577
PspPI GGNCC 3 cut(s) 236, 454, 517
PsuI RGATCY 2 cut(s) 559, 641
RseI CAYNNNNRTG 2 cut(s) 204, 479
SaqAI TTAA 2 cut(s) 93, 203
SatI GCNGC 1 cut(s) 6
Sau3AI GATC 3 cut(s) 354, 559, 641
Sau96I GGNCC 3 cut(s) 236, 454, 517
SduI GDGCHC 4 cut(s) 224, 420, 474, 486
SetI ASST 2 cut(s) 215, 536
SfaNI GCATC 1 cut(s) 80
SmiMI CAYNNNNRTG 2 cut(s) 204, 479
SmlI CTYRAG 1 cut(s) 214
SmoI CTYRAG 1 cut(s) 214
Sse9I AATT 3 cut(s) 9, 48, 607
SsiI CCGC 2 cut(s) 331, 636
StyI CCWWGG 1 cut(s) 98
TaaI ACNGT 2 cut(s) 122, 394
TasI AATT 3 cut(s) 9, 48, 607
Tru1I TTAA 2 cut(s) 93, 203
Tru9I TTAA 2 cut(s) 93, 203
TseFI GTSAC 1 cut(s) 358
TseI GCWGC 1 cut(s) 5
Tsp45I GTSAC 1 cut(s) 358
TspDTI ATGAA 3 cut(s) 15, 312, 478
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.