Prupe.5G088900_v2.0.a1

This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
9955688 .. 9960814
5127 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G088900.4

Sequence Viewer

Length: 1410 bp
ATGGCCAAGAACGTTGGAATTCTCGCCGCCGATATCTACTTCCCTCCTACCTGTATTCAGCAGGAAGCCTTGGAGGCTCACGATGGTGCAAGCAAAGGAAAGTACACTATCGGACTTGGACAAGATTGCATGGCATTTTGTTCAGAGGTGGAAGATGTCATCTCCATGAGTTTGACAGTGGTTACCTCCCTTCTTGAGAAATATGGGATTGATCCAAAACAAATTGGTCGGCTGGAAGTAGGCAGCGAAACTGTCATAGACAAAAGCAAATCTATTAAGACCTTCCTGATGACAGTTTTTGAGAAACATGGAAATACTGACATTGAAGGTGTCGACTCAACTAATGCATGCTATGGGGGTACTGCAGCTTTATTCAACTGTGTGAATTGGGTGGAGAGTAGCTCGTGGGATGGACGCTATGGGCTTGTCGTGTGCACTGACAGTGCGGTCTATGCAGAAGGACCGGCCCGACCAACTGGTGGAGCAGCTGCTATTGCTTTGCTGATTGGACCTGATGCTCCTATTGCTTTTGAAAGCAAAATTAGGGGAAGTCATATGGCTCACGTCTATGATTTTTACAAACCTGACCTTGCTAGTGAATATCCGGTTGTTGATGGAAAACTTTCTCAAACATGTTATCTGAAGGCTCTTGATTCTTGCTACAAGGAATTATGTAAAAAGTATGAGAAATTGGAAGGCAAACAATTTTCTCTGGCTGATGCTGAGTATTTCGTATTTCATTCTCCTTATAACAAGCTTGTACAAAAAAGCTTTGCCCGTTTGGTATTCAATGACTCCGTGAGGAATGCCAGCTCCATTGATGAGGCCGCTAAAGAAAAGCTGGCCCCATTTGCGAGCCTCCCTGGTGATGAGAGCTACCAAAGCCGGGATCTTGAAAAGGTATCCCAGCAAGTTGCAAAGCCCCTATATGACGCTAAGGTGCAACCAACAACTTTGGTGCCAAAGCAAGTTGGGAACATGTACACTGCATCTCTTTATGCGGCATTTGTATCACTCCTCCATAATAAGCACAGCTCATTGGATGGCAAGCGGGTGATACTCTTCTCTTATGGAAGTGGCTCAACTGCTACTATGTTCTCGTTGCGCCTCAATGCCGGTCAACATCCCTTTAGCTTGGAGAACATTGCAGCAGTGTTGAATGTTGGAGAAAAGTTGAAGTCAAGACATGAGTTCCCTCCCGAGAAGTTTGTTGAAGTTATGAAGATCATGGAGCATAGGTATGGAGGCAAAGACTTTGTGACAAACCAGGACATTAGCCTTCTACTTCCAGGCACATACTATCTTACTGAAGTTGACTCTAAGTACCGTAGATTCTACGCCAAGAAGGAAGGAGGCAGTACTGCCGCCGTCACCTCCAATGAGAATGGTGTGGTTGCCAACGGTCACTGA

Protein Analysis

470

Amino Acids

51.37

Weight (kDa)

6.04

Isoelectric Point (pI)

33.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010125)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 750
AasI GACNNNNNNGTC 1 cut(s) 446
AccB1I GGYRCC 1 cut(s) 958
AccB7I CCANNNNNTGG 1 cut(s) 479
AccI GTMKAC 1 cut(s) 333
AciI CCGC 6 cut(s) 27, 446, 828, 1001, 1051, 1365
AclI AACGTT 1 cut(s) 12
AclWI GGATC 2 cut(s) 206, 897
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 18
AcuI CTGAAG 2 cut(s) 662, 1329
AfaI GTAC 6 cut(s) 104, 361, 762, 983, 1325, 1360
AfiI CCNNNNNNNGG 2 cut(s) 479, 886
AflIII ACRYGT 2 cut(s) 632, 978
AgsI TTSAA 8 cut(s) 326, 376, 533, 790, 896, 1159, 1177, 1214
AjiI CACGTC 1 cut(s) 565
AjnI CCWGG 3 cut(s) 862, 1266, 1288
AleI CACNNNNGTG 1 cut(s) 84
Alw21I GWGCWC 1 cut(s) 437
Alw44I GTGCAC 1 cut(s) 433
AlwI GGATC 2 cut(s) 206, 897
Ama87I CYCGRG 1 cut(s) 1199
AoxI GGCC 4 cut(s) 3, 465, 825, 843
ApaLI GTGCAC 1 cut(s) 433
ApeKI GCWGC 5 cut(s) 243, 365, 485, 488, 1148
ApoI RAATTY 1 cut(s) 18
Asp700I GAANNNNTTC 1 cut(s) 622
AspLEI GCGC 1 cut(s) 1107
AspS9I GGNCC 4 cut(s) 461, 466, 509, 844
AsuC2I CCSGG 1 cut(s) 887
AsuHPI GGTGA 3 cut(s) 878, 1066, 1363
AvaI CYCGRG 1 cut(s) 1199
AvaII GGWCC 2 cut(s) 461, 509
BaeGI GKGCMC 1 cut(s) 437
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 958
BauI CACGAG 1 cut(s) 403
Bbv12I GWGCWC 1 cut(s) 437
BbvI GCAGC 5 cut(s) 255, 377, 475, 497, 1160
BccI CCATC 4 cut(s) 77, 404, 608, 1037
BceAI ACGGC 1 cut(s) 1352
BciT130I CCWGG 3 cut(s) 864, 1268, 1290
BciVI GTATCC 1 cut(s) 913
BcnI CCSGG 1 cut(s) 887
BfaI CTAG 1 cut(s) 594
BfmI CTRYAG 1 cut(s) 363
BfuI GTATCC 1 cut(s) 913
BglI GCCNNNNNGGC 1 cut(s) 74
BisI GCNGC 9 cut(s) 27, 244, 366, 486, 489, 828, 1002, 1149, 1365
BlsI GCNGC 9 cut(s) 28, 245, 367, 487, 490, 829, 1003, 1150, 1366
BmcAI AGTACT 1 cut(s) 1360
Bme1390I CCNGG 4 cut(s) 864, 887, 1268, 1290
Bme18I GGWCC 2 cut(s) 461, 509
BmeT110I CYCGRG 1 cut(s) 1199
BmgBI CACGTC 1 cut(s) 565
BmgT120I GGNCC 4 cut(s) 461, 466, 509, 844
BmiI GGNNCC 2 cut(s) 846, 960
BmrFI CCNGG 4 cut(s) 864, 887, 1268, 1290
BmsI GCATC 3 cut(s) 505, 709, 998
BplI GAGNNNNNCTC 2 cut(s) 386, 418
Bpu10I CCTNAGC 1 cut(s) 936
BpuEI CTTGAG 1 cut(s) 215
BpuMI CCSGG 1 cut(s) 887
BsaJI CCNNGG 2 cut(s) 69, 862
BsaWI WCCGGW 1 cut(s) 604
BsaXI ACNNNNNCTCC 2 cut(s) 1223, 1253
Bsc4I CCNNNNNNNGG 2 cut(s) 479, 886
Bse118I RCCGGY 2 cut(s) 463, 1115
Bse1I ACTGG 1 cut(s) 481
Bse3DI GCAATG 1 cut(s) 1143
BseBI CCWGG 3 cut(s) 864, 1268, 1290
BseDI CCNNGG 2 cut(s) 69, 862
BseGI GGATG 3 cut(s) 415, 1048, 1123
BseLI CCNNNNNNNGG 2 cut(s) 479, 886
BseMI GCAATG 1 cut(s) 1143
BseMII CTCAG 1 cut(s) 714
BseNI ACTGG 1 cut(s) 481
BseRI GAGGAG 1 cut(s) 1007
BseSI GKGCMC 1 cut(s) 437
BseXI GCAGC 5 cut(s) 255, 377, 475, 497, 1160
BseYI CCCAGC 1 cut(s) 906
BshFI GGCC 4 cut(s) 5, 467, 827, 845
BshNI GGYRCC 1 cut(s) 958
BsiHKAI GWGCWC 1 cut(s) 437
BsiHKCI CYCGRG 1 cut(s) 1199
BsiSI CCGG 4 cut(s) 464, 605, 886, 1116
BslI CCNNNNNNNGG 2 cut(s) 479, 886
BsmI GAATGC 1 cut(s) 811
BsnI GGCC 4 cut(s) 5, 467, 827, 845
BsoBI CYCGRG 1 cut(s) 1199
Bsp1286I GDGCHC 1 cut(s) 437
Bsp1407I TGTACA 2 cut(s) 760, 981
Bsp143I GATC 3 cut(s) 211, 889, 1224
BspACI CCGC 6 cut(s) 27, 446, 828, 1001, 1051, 1365
BspANI GGCC 4 cut(s) 5, 467, 827, 845
BspCNI CTCAG 1 cut(s) 715
BspLI GGNNCC 2 cut(s) 846, 960
BspMAI CTGCAG 1 cut(s) 367
BspPI GGATC 2 cut(s) 206, 897
BspT107I GGYRCC 1 cut(s) 958
BsrDI GCAATG 1 cut(s) 1143
BsrFI RCCGGY 2 cut(s) 463, 1115
BsrGI TGTACA 2 cut(s) 760, 981
BsrI ACTGG 1 cut(s) 481
BssAI RCCGGY 2 cut(s) 463, 1115
BssECI CCNNGG 2 cut(s) 69, 862
BssMI GATC 3 cut(s) 211, 889, 1224
BssSI CACGAG 1 cut(s) 403
BssT1I CCWWGG 1 cut(s) 69
Bst2BI CACGAG 1 cut(s) 403
Bst2UI CCWGG 3 cut(s) 864, 1268, 1290
Bst4CI ACNGT 7 cut(s) 178, 253, 295, 380, 443, 1328, 1403
Bst6I CTCTTC 1 cut(s) 1067
BstAUI TGTACA 2 cut(s) 760, 981
BstC8I GCNNGC 6 cut(s) 91, 349, 811, 843, 856, 1049
BstDEI CTNAG 3 cut(s) 723, 936, 1320
BstEII GGTNACC 1 cut(s) 181
BstF5I GGATG 3 cut(s) 415, 1048, 1123
BstHHI GCGC 1 cut(s) 1107
BstKTI GATC 3 cut(s) 214, 892, 1227
BstMBI GATC 3 cut(s) 211, 889, 1224
BstMWI GCNNNNNNNGC 6 cut(s) 74, 452, 494, 524, 851, 882
BstNI CCWGG 3 cut(s) 864, 1268, 1290
BstNSI RCATGY 3 cut(s) 351, 636, 982
BstPI GGTNACC 1 cut(s) 181
BstSCI CCNGG 4 cut(s) 862, 885, 1266, 1288
BstSFI CTRYAG 1 cut(s) 363
BstSLI GKGCMC 1 cut(s) 437
BstV1I GCAGC 5 cut(s) 255, 377, 475, 497, 1160
BstX2I RGATCY 1 cut(s) 889
BstYI RGATCY 1 cut(s) 889
BsuI GTATCC 1 cut(s) 913
BsuRI GGCC 4 cut(s) 5, 467, 827, 845
BtrI CACGTC 1 cut(s) 565
BtsCI GGATG 3 cut(s) 415, 1048, 1123
BtsI GCAGTG 2 cut(s) 984, 1158
BtsIMutI CAGTG 6 cut(s) 183, 435, 448, 984, 1158, 1405
Cac8I GCNNGC 6 cut(s) 91, 349, 811, 843, 856, 1049
CfoI GCGC 1 cut(s) 1107
Cfr10I RCCGGY 2 cut(s) 463, 1115
Cfr13I GGNCC 4 cut(s) 461, 466, 509, 844
CseI GACGC 2 cut(s) 423, 941
Csp6I GTAC 6 cut(s) 103, 360, 761, 982, 1324, 1359
CviAII CATG 8 cut(s) 130, 166, 308, 348, 633, 979, 1187, 1228
CviQI GTAC 6 cut(s) 103, 360, 761, 982, 1324, 1359
DdeI CTNAG 3 cut(s) 723, 936, 1320
DpnI GATC 3 cut(s) 213, 891, 1226
DpnII GATC 3 cut(s) 211, 889, 1224
DrdI GACNNNNNNGTC 1 cut(s) 446
DseDI GACNNNNNNGTC 1 cut(s) 446
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 1067
EarI CTCTTC 1 cut(s) 1067
Eco130I CCWWGG 1 cut(s) 69
Eco32I GATATC 1 cut(s) 34
Eco47I GGWCC 2 cut(s) 461, 509
Eco57I CTGAAG 2 cut(s) 662, 1329
Eco88I CYCGRG 1 cut(s) 1199
Eco91I GGTNACC 1 cut(s) 181
EcoO65I GGTNACC 1 cut(s) 181
EcoRI GAATTC 1 cut(s) 18
EcoRII CCWGG 3 cut(s) 862, 1266, 1288
EcoRV GATATC 1 cut(s) 34
EcoT14I CCWWGG 1 cut(s) 69
EcoT22I ATGCAT 1 cut(s) 349
ErhI CCWWGG 1 cut(s) 69
FaeI CATG 8 cut(s) 133, 169, 311, 351, 636, 982, 1190, 1231
FatI CATG 8 cut(s) 129, 165, 307, 347, 632, 978, 1186, 1227
FauI CCCGC 1 cut(s) 1044
FauNDI CATATG 1 cut(s) 555
FblI GTMKAC 1 cut(s) 333
Fnu4HI GCNGC 9 cut(s) 27, 244, 366, 486, 489, 828, 1002, 1149, 1365
FokI GGATG 3 cut(s) 422, 1055, 1110
Fsp4HI GCNGC 9 cut(s) 27, 244, 366, 486, 489, 828, 1002, 1149, 1365
FspBI CTAG 1 cut(s) 594
GlaI GCGC 1 cut(s) 1106
GluI GCNGC 9 cut(s) 27, 244, 366, 486, 489, 828, 1002, 1149, 1365
GsaI CCCAGC 1 cut(s) 910
HaeIII GGCC 4 cut(s) 5, 467, 827, 845
HapII CCGG 4 cut(s) 464, 605, 886, 1116
HgaI GACGC 2 cut(s) 423, 941
HhaI GCGC 1 cut(s) 1107
Hin1II CATG 8 cut(s) 133, 169, 311, 351, 636, 982, 1190, 1231
Hin6I GCGC 1 cut(s) 1105
HinP1I GCGC 1 cut(s) 1105
HincII GTYRAC 3 cut(s) 334, 1121, 1315
HindII GTYRAC 3 cut(s) 334, 1121, 1315
HindIII AAGCTT 2 cut(s) 755, 769
HinfI GANTC 5 cut(s) 335, 653, 794, 1316, 1332
HpaII CCGG 4 cut(s) 464, 605, 886, 1116
HphI GGTGA 3 cut(s) 878, 1066, 1363
Hpy166II GTNNAC 6 cut(s) 105, 334, 435, 984, 1121, 1315
Hpy188I TCNGA 3 cut(s) 113, 145, 642
Hpy188III TCNNGA 7 cut(s) 80, 194, 286, 650, 893, 1182, 1199
Hpy8I GTNNAC 6 cut(s) 105, 334, 435, 984, 1121, 1315
HpyAV CCTTC 9 cut(s) 200, 292, 320, 452, 637, 689, 1289, 1339, 1343
HpyCH4III ACNGT 7 cut(s) 178, 253, 295, 380, 443, 1328, 1403
HpyCH4IV ACGT 2 cut(s) 12, 564
HpyF10VI GCNNNNNNNGC 6 cut(s) 74, 452, 494, 524, 851, 882
HpyF3I CTNAG 3 cut(s) 723, 936, 1320
HpySE526I ACGT 2 cut(s) 12, 564
Hsp92II CATG 8 cut(s) 133, 169, 311, 351, 636, 982, 1190, 1231
HspAI GCGC 1 cut(s) 1105
Kzo9I GATC 3 cut(s) 211, 889, 1224
LmnI GCTCC 4 cut(s) 482, 523, 818, 1231
Lsp1109I GCAGC 5 cut(s) 255, 377, 475, 497, 1160
LweI GCATC 3 cut(s) 505, 709, 998
MaeI CTAG 1 cut(s) 594
MaeII ACGT 2 cut(s) 12, 564
MaeIII GTNAC 4 cut(s) 181, 1258, 1369, 1403
MalI GATC 3 cut(s) 213, 891, 1226
MboI GATC 3 cut(s) 211, 889, 1224
MboII GAAGA 3 cut(s) 164, 1054, 1234
MflI RGATCY 1 cut(s) 889
MhlI GDGCHC 1 cut(s) 437
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 7 cut(s) 18, 222, 385, 540, 668, 689, 704
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 3 cut(s) 329, 788, 1310
MmeI TCCRAC 1 cut(s) 1144
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 349
MroXI GAANNNNTTC 1 cut(s) 622
MscI TGGCCA 1 cut(s) 5
MseI TTAA 1 cut(s) 276
MslI CAYNNNNRTG 4 cut(s) 84, 164, 567, 1239
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 488
MspI CCGG 4 cut(s) 464, 605, 886, 1116
MspR9I CCNGG 4 cut(s) 864, 887, 1268, 1290
Mva1269I GAATGC 1 cut(s) 811
MvaI CCWGG 3 cut(s) 864, 1268, 1290
MwoI GCNNNNNNNGC 6 cut(s) 74, 452, 494, 524, 851, 882
NciI CCSGG 1 cut(s) 887
NdeI CATATG 1 cut(s) 555
NdeII GATC 3 cut(s) 211, 889, 1224
NlaIII CATG 8 cut(s) 133, 169, 311, 351, 636, 982, 1190, 1231
NlaIV GGNNCC 2 cut(s) 846, 960
NmuCI GTSAC 3 cut(s) 1258, 1369, 1403
NsiI ATGCAT 1 cut(s) 349
NspI RCATGY 3 cut(s) 351, 636, 982
OliI CACNNNNGTG 1 cut(s) 84
PaeI GCATGC 1 cut(s) 351
PciI ACATGT 2 cut(s) 632, 978
PctI GAATGC 1 cut(s) 811
PdmI GAANNNNTTC 1 cut(s) 622
PfeI GAWTC 2 cut(s) 653, 1332
PflMI CCANNNNNTGG 1 cut(s) 479
PkrI GCNGC 9 cut(s) 28, 245, 367, 487, 490, 829, 1003, 1150, 1366
PleI GAGTC 3 cut(s) 329, 788, 1310
PpsI GAGTC 3 cut(s) 329, 788, 1310
PscI ACATGT 2 cut(s) 632, 978
PsiI TTATAA 1 cut(s) 750
Psp1406I AACGTT 1 cut(s) 12
Psp6I CCWGG 3 cut(s) 862, 1266, 1288
PspEI GGTNACC 1 cut(s) 181
PspFI CCCAGC 1 cut(s) 906
PspGI CCWGG 3 cut(s) 862, 1266, 1288
PspN4I GGNNCC 2 cut(s) 846, 960
PspPI GGNCC 4 cut(s) 461, 466, 509, 844
PstI CTGCAG 1 cut(s) 367
PsuI RGATCY 1 cut(s) 889
PvuII CAGCTG 1 cut(s) 488
RsaI GTAC 6 cut(s) 104, 361, 762, 983, 1325, 1360
RsaNI GTAC 6 cut(s) 103, 360, 761, 982, 1324, 1359
RseI CAYNNNNRTG 4 cut(s) 84, 164, 567, 1239
SalI GTCGAC 1 cut(s) 332
SaqAI TTAA 1 cut(s) 276
SatI GCNGC 9 cut(s) 27, 244, 366, 486, 489, 828, 1002, 1149, 1365
Sau3AI GATC 3 cut(s) 211, 889, 1224
Sau96I GGNCC 4 cut(s) 461, 466, 509, 844
ScaI AGTACT 1 cut(s) 1360
SchI GAGTC 3 cut(s) 329, 788, 1310
ScrFI CCNGG 4 cut(s) 864, 887, 1268, 1290
SduI GDGCHC 1 cut(s) 437
SfaNI GCATC 3 cut(s) 505, 709, 998
SfcI CTRYAG 1 cut(s) 363
SinI GGWCC 2 cut(s) 461, 509
SmiMI CAYNNNNRTG 4 cut(s) 84, 164, 567, 1239
SmlI CTYRAG 1 cut(s) 194
SmoI CTYRAG 1 cut(s) 194
SphI GCATGC 1 cut(s) 351
Sse9I AATT 7 cut(s) 18, 222, 385, 540, 668, 689, 704
SsiI CCGC 6 cut(s) 27, 446, 828, 1001, 1051, 1365
SspMI CTAG 1 cut(s) 594
StyD4I CCNGG 4 cut(s) 862, 885, 1266, 1288
StyI CCWWGG 1 cut(s) 69
TaaI ACNGT 7 cut(s) 178, 253, 295, 380, 443, 1328, 1403
TaiI ACGT 2 cut(s) 15, 567
TaqI TCGA 1 cut(s) 333
TasI AATT 7 cut(s) 18, 222, 385, 540, 668, 689, 704
TatI WGTACW 4 cut(s) 102, 760, 981, 1358
TauI GCSGC 4 cut(s) 29, 830, 1004, 1367
TfiI GAWTC 2 cut(s) 653, 1332
Tru1I TTAA 1 cut(s) 276
Tru9I TTAA 1 cut(s) 276
TscAI CASTG 5 cut(s) 183, 442, 448, 991, 1158
TseFI GTSAC 3 cut(s) 1258, 1369, 1403
TseI GCWGC 5 cut(s) 243, 365, 485, 488, 1148
Tsp45I GTSAC 3 cut(s) 1258, 1369, 1403
TspDTI ATGAA 2 cut(s) 728, 1235
TspGWI ACGGA 1 cut(s) 787
TspRI CASTG 5 cut(s) 183, 442, 448, 991, 1158
Van91I CCANNNNNTGG 1 cut(s) 479
VneI GTGCAC 1 cut(s) 433
VpaK11BI GGWCC 2 cut(s) 461, 509
XapI RAATTY 1 cut(s) 18
XceI RCATGY 3 cut(s) 351, 636, 982
XmiI GTMKAC 1 cut(s) 333
XmnI GAANNNNTTC 1 cut(s) 622
XspI CTAG 1 cut(s) 594
ZrmI AGTACT 1 cut(s) 1360
Zsp2I ATGCAT 1 cut(s) 349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.