pycom06g07050

This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
11413026 .. 11416778
3753 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g07050.3

Sequence Viewer

Length: 1332 bp
ATGGCCAAGAACGTCGGAATTCTCGCCGTCGACATCTACTTCCCCCCTACCTGTATTCAGCAGGAAGCCTTGGAAGCTCATGATGGTGCCAGCAAAGGGAAGTACACTATCGGACTTGGACAAGATTGCATGGCGTTTTGTTCAGAGGTGGAAGATGTCATCTCAATGAGTTTGACAGTGGTGACCTCCCTTCTTGAGAAATATGGAATTGATCCAAAACAAATTGGTCGCCTCGAAAAACATGGAAATACTGACATTGAAGGTGTTGACTCAACTAATGCATGCTATGGGGGAACTGCAGCTTTATTCAACTGCGTCAATTGGGTAGAGAGTAGCTCTTGGGATGGACGCTATGGGCTTGTCGTGTGCACTGACAGTGCGGTCTATGCAGAAGGACCTGCACGACCTACTGGTGGAGCAGCTGCTATTGCCATGCTGATTGGACCTGATGCTCCTATTTCTTTTGAGAGCAAAATTAGGGGAAGTCATATGGCTCATGTCTATGATTTTTACAAGCCCGACCTTGCTAGTGAATATCCGGTTGTTGATGGAAAGCTTTCTCAAACATGTTACCTGAAGGCTCTTGATTCTTGCTACAAGGAATTATGTAAAAAGTATGAGAAATTGGAAGGTAAACAATTTTCTATTGCTGATGCTGAGTATTTCGTATTTCATTCTCCATATAACAAGCTCGTACAAAAAAGCTTTGCTCGTTTGGTGTTCAATGACTCCATAAGGAATGCCAGCTCCATTGATGAGGCCGGGAAAGAAAAGCTGGCTCCATTTGCTGACCTTCCTGGTGATGATAGCTACAATAGCCGGGATCTTGAAAAGGCATCCCAGCAAGTCGCAAAGCCTCTATACGACGCTAAGGTGGTACCTACAACTTTGGTACCAAAGCAAGTTGGCAACATGTACACTGCATCTATTTATGCAGCATTTGTATCCCTCCTTCACAACAAGCACAGCTCATTGGATGGCAAGCGGGTGATACTGTTCTCTTATGGAAGTGGCTCAGCTGCTACCATGTTCTCATTGCGTCTCAATGCTGGTCAACAGCCCTTTAGCTTGGAGAACATTGCAGCCGTTATGAATGTTGGAGAGAAGTTGAAAGCAAGACATGAGTTCCCTCCCGAGAAGTTTGTTGAAGTGATGAAGATCATGGAGCACAGGTATGGGGGCAAAGACTTTGCGACCAAGCAGGATATCAGCCTTCTACTTCCAGGCACATACTATCTTACTGAAGTCGACTCTAAGTATCGTAGATTCTATGCCAAGAAGGATGCCGCTGCCACCCCTGATGACAATGGTGTGGTTGCCAACTGTCGCTGA

Protein Analysis

444

Amino Acids

48.6

Weight (kDa)

5.91

Isoelectric Point (pI)

35.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010125)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 380
Acc36I ACCTGC 1 cut(s) 406
Acc65I GGTACC 2 cut(s) 877, 892
AccB1I GGYRCC 3 cut(s) 86, 877, 892
AccI GTMKAC 2 cut(s) 30, 1248
AciI CCGC 3 cut(s) 380, 985, 1287
AclWI GGATC 2 cut(s) 206, 831
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 18
AcuI CTGAAG 2 cut(s) 596, 1263
AfaI GTAC 5 cut(s) 104, 696, 879, 894, 917
AfiI CCNNNNNNNGG 2 cut(s) 96, 413
AflIII ACRYGT 2 cut(s) 566, 912
AgsI TTSAA 6 cut(s) 260, 310, 724, 830, 1111, 1148
AjnI CCWGG 2 cut(s) 796, 1222
Alw21I GWGCWC 2 cut(s) 371, 1170
Alw26I GTCTC 1 cut(s) 1046
Alw44I GTGCAC 1 cut(s) 367
AlwI GGATC 2 cut(s) 206, 831
Ama87I CYCGRG 1 cut(s) 1133
AoxI GGCC 2 cut(s) 3, 759
ApaLI GTGCAC 1 cut(s) 367
ApeKI GCWGC 7 cut(s) 299, 419, 422, 935, 1019, 1082, 1289
ApoI RAATTY 1 cut(s) 18
Asp700I GAANNNNTTC 1 cut(s) 556
Asp718I GGTACC 2 cut(s) 877, 892
AspS9I GGNCC 2 cut(s) 395, 443
AsuC2I CCSGG 2 cut(s) 763, 821
AsuHPI GGTGA 3 cut(s) 193, 812, 1000
AvaI CYCGRG 1 cut(s) 1133
AvaII GGWCC 2 cut(s) 395, 443
BaeGI GKGCMC 1 cut(s) 371
BaeI ACNNNNGTAYC 2 cut(s) 876, 909
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 3 cut(s) 86, 877, 892
BarI GAAGNNNNNNTAC 2 cut(s) 936, 968
Bbv12I GWGCWC 2 cut(s) 371, 1170
BbvI GCAGC 7 cut(s) 311, 409, 431, 947, 1006, 1094, 1276
BccI CCATC 4 cut(s) 77, 338, 542, 971
BceAI ACGGC 2 cut(s) 11, 1070
BciT130I CCWGG 2 cut(s) 798, 1224
BciVI GTATCC 1 cut(s) 955
BcnI CCSGG 2 cut(s) 763, 821
BcoDI GTCTC 1 cut(s) 1046
BfaI CTAG 1 cut(s) 528
BfmI CTRYAG 1 cut(s) 297
BfuAI ACCTGC 1 cut(s) 406
BfuI GTATCC 1 cut(s) 955
BisI GCNGC 8 cut(s) 300, 420, 423, 936, 1020, 1083, 1287, 1290
BlpI GCTNAGC 1 cut(s) 1015
BlsI GCNGC 8 cut(s) 301, 421, 424, 937, 1021, 1084, 1288, 1291
Bme1390I CCNGG 4 cut(s) 763, 798, 821, 1224
Bme18I GGWCC 2 cut(s) 395, 443
BmeT110I CYCGRG 1 cut(s) 1133
BmgT120I GGNCC 2 cut(s) 395, 443
BmiI GGNNCC 4 cut(s) 88, 780, 879, 894
BmrFI CCNGG 4 cut(s) 763, 798, 821, 1224
BmsI GCATC 5 cut(s) 439, 643, 845, 932, 1273
BplI GAGNNNNNCTC 2 cut(s) 320, 352
Bpu10I CCTNAGC 1 cut(s) 870
Bpu1102I GCTNAGC 1 cut(s) 1015
BpuEI CTTGAG 1 cut(s) 215
BpuMI CCSGG 2 cut(s) 763, 821
BsaBI GATNNNNATC 1 cut(s) 1157
BsaJI CCNNGG 1 cut(s) 69
BsaWI WCCGGW 1 cut(s) 538
BsaXI ACNNNNNCTCC 2 cut(s) 1157, 1187
Bsc4I CCNNNNNNNGG 2 cut(s) 96, 413
Bse1I ACTGG 1 cut(s) 415
Bse3DI GCAATG 2 cut(s) 1034, 1077
Bse8I GATNNNNATC 1 cut(s) 1157
BseBI CCWGG 2 cut(s) 798, 1224
BseDI CCNNGG 1 cut(s) 69
BseGI GGATG 4 cut(s) 349, 836, 982, 1288
BseJI GATNNNNATC 1 cut(s) 1157
BseLI CCNNNNNNNGG 2 cut(s) 96, 413
BseMI GCAATG 2 cut(s) 1034, 1077
BseMII CTCAG 2 cut(s) 648, 1029
BseNI ACTGG 1 cut(s) 415
BseSI GKGCMC 1 cut(s) 371
BseXI GCAGC 7 cut(s) 311, 409, 431, 947, 1006, 1094, 1276
BseYI CCCAGC 1 cut(s) 840
BsgI GTGCAG 1 cut(s) 384
BshFI GGCC 2 cut(s) 5, 761
BshNI GGYRCC 3 cut(s) 86, 877, 892
BsiHKAI GWGCWC 2 cut(s) 371, 1170
BsiHKCI CYCGRG 1 cut(s) 1133
BsiSI CCGG 3 cut(s) 539, 762, 820
BslI CCNNNNNNNGG 2 cut(s) 96, 413
BsmAI GTCTC 1 cut(s) 1046
BsmBI CGTCTC 1 cut(s) 1046
BsmI GAATGC 1 cut(s) 745
BsnI GGCC 2 cut(s) 5, 761
BsoBI CYCGRG 1 cut(s) 1133
Bsp1286I GDGCHC 2 cut(s) 371, 1170
Bsp1407I TGTACA 1 cut(s) 915
Bsp143I GATC 3 cut(s) 211, 823, 1158
Bsp1720I GCTNAGC 1 cut(s) 1015
BspACI CCGC 3 cut(s) 380, 985, 1287
BspANI GGCC 2 cut(s) 5, 761
BspCNI CTCAG 2 cut(s) 649, 1028
BspHI TCATGA 1 cut(s) 79
BspLI GGNNCC 4 cut(s) 88, 780, 879, 894
BspMAI CTGCAG 1 cut(s) 301
BspMI ACCTGC 1 cut(s) 406
BspPI GGATC 2 cut(s) 206, 831
BspT107I GGYRCC 3 cut(s) 86, 877, 892
BsrDI GCAATG 2 cut(s) 1034, 1077
BsrGI TGTACA 1 cut(s) 915
BsrI ACTGG 1 cut(s) 415
BssECI CCNNGG 1 cut(s) 69
BssMI GATC 3 cut(s) 211, 823, 1158
BssT1I CCWWGG 1 cut(s) 69
Bst2UI CCWGG 2 cut(s) 798, 1224
Bst4CI ACNGT 4 cut(s) 178, 377, 996, 1325
BstAUI TGTACA 1 cut(s) 915
BstC8I GCNNGC 5 cut(s) 91, 283, 745, 777, 983
BstDEI CTNAG 4 cut(s) 657, 870, 1015, 1254
BstEII GGTNACC 1 cut(s) 181
BstF5I GGATG 4 cut(s) 349, 836, 982, 1288
BstKTI GATC 3 cut(s) 214, 826, 1161
BstMAI GTCTC 1 cut(s) 1046
BstMBI GATC 3 cut(s) 211, 823, 1158
BstMWI GCNNNNNNNGC 5 cut(s) 74, 386, 428, 785, 816
BstNI CCWGG 2 cut(s) 798, 1224
BstNSI RCATGY 3 cut(s) 285, 570, 916
BstPI GGTNACC 1 cut(s) 181
BstSCI CCNGG 4 cut(s) 761, 796, 819, 1222
BstSFI CTRYAG 1 cut(s) 297
BstSLI GKGCMC 1 cut(s) 371
BstV1I GCAGC 7 cut(s) 311, 409, 431, 947, 1006, 1094, 1276
BstX2I RGATCY 1 cut(s) 823
BstYI RGATCY 1 cut(s) 823
BsuI GTATCC 1 cut(s) 955
BsuRI GGCC 2 cut(s) 5, 761
BtsCI GGATG 4 cut(s) 349, 836, 982, 1288
BtsI GCAGTG 1 cut(s) 918
BtsIMutI CAGTG 4 cut(s) 183, 369, 382, 918
BveI ACCTGC 1 cut(s) 406
Cac8I GCNNGC 5 cut(s) 91, 283, 745, 777, 983
CciI TCATGA 1 cut(s) 79
Cfr13I GGNCC 2 cut(s) 395, 443
CseI GACGC 4 cut(s) 304, 357, 875, 1028
Csp6I GTAC 5 cut(s) 103, 695, 878, 893, 916
CviQI GTAC 5 cut(s) 103, 695, 878, 893, 916
DdeI CTNAG 4 cut(s) 657, 870, 1015, 1254
DpnI GATC 3 cut(s) 213, 825, 1160
DpnII GATC 3 cut(s) 211, 823, 1158
DrdI GACNNNNNNGTC 1 cut(s) 380
DseDI GACNNNNNNGTC 1 cut(s) 380
EaeI YGGCCR 1 cut(s) 3
Eco130I CCWWGG 1 cut(s) 69
Eco32I GATATC 1 cut(s) 1207
Eco47I GGWCC 2 cut(s) 395, 443
Eco57I CTGAAG 2 cut(s) 596, 1263
Eco88I CYCGRG 1 cut(s) 1133
Eco91I GGTNACC 1 cut(s) 181
EcoO109I RGGNCCY 1 cut(s) 395
EcoO65I GGTNACC 1 cut(s) 181
EcoRI GAATTC 1 cut(s) 18
EcoRII CCWGG 2 cut(s) 796, 1222
EcoRV GATATC 1 cut(s) 1207
EcoT14I CCWWGG 1 cut(s) 69
EcoT22I ATGCAT 1 cut(s) 283
ErhI CCWWGG 1 cut(s) 69
Esp3I CGTCTC 1 cut(s) 1046
FauI CCCGC 1 cut(s) 978
FauNDI CATATG 1 cut(s) 489
FblI GTMKAC 2 cut(s) 30, 1248
Fnu4HI GCNGC 8 cut(s) 300, 420, 423, 936, 1020, 1083, 1287, 1290
FokI GGATG 4 cut(s) 356, 823, 989, 1295
Fsp4HI GCNGC 8 cut(s) 300, 420, 423, 936, 1020, 1083, 1287, 1290
FspBI CTAG 1 cut(s) 528
GluI GCNGC 8 cut(s) 300, 420, 423, 936, 1020, 1083, 1287, 1290
GsaI CCCAGC 1 cut(s) 844
HaeIII GGCC 2 cut(s) 5, 761
HapII CCGG 3 cut(s) 539, 762, 820
HgaI GACGC 4 cut(s) 304, 357, 875, 1028
HincII GTYRAC 4 cut(s) 31, 268, 1055, 1249
HindII GTYRAC 4 cut(s) 31, 268, 1055, 1249
HindIII AAGCTT 2 cut(s) 554, 703
HinfI GANTC 5 cut(s) 269, 587, 728, 1250, 1266
HpaII CCGG 3 cut(s) 539, 762, 820
HphI GGTGA 3 cut(s) 193, 812, 1000
Hpy166II GTNNAC 8 cut(s) 31, 105, 268, 369, 635, 918, 1055, 1249
Hpy188I TCNGA 3 cut(s) 17, 113, 145
Hpy188III TCNNGA 5 cut(s) 80, 194, 584, 827, 1133
Hpy8I GTNNAC 8 cut(s) 31, 105, 268, 369, 635, 918, 1055, 1249
Hpy99I CGWCG 3 cut(s) 17, 32, 869
HpyAV CCTTC 9 cut(s) 200, 254, 386, 571, 623, 803, 962, 1223, 1273
HpyCH4III ACNGT 4 cut(s) 178, 377, 996, 1325
HpyCH4IV ACGT 1 cut(s) 12
HpyCH4V TGCA 9 cut(s) 129, 281, 299, 369, 389, 401, 923, 935, 1082
HpyF10VI GCNNNNNNNGC 5 cut(s) 74, 386, 428, 785, 816
HpyF3I CTNAG 4 cut(s) 657, 870, 1015, 1254
HpySE526I ACGT 1 cut(s) 12
KpnI GGTACC 2 cut(s) 881, 896
Kzo9I GATC 3 cut(s) 211, 823, 1158
LmnI GCTCC 5 cut(s) 416, 457, 752, 784, 1165
Lsp1109I GCAGC 7 cut(s) 311, 409, 431, 947, 1006, 1094, 1276
LweI GCATC 5 cut(s) 439, 643, 845, 932, 1273
MaeI CTAG 1 cut(s) 528
MaeII ACGT 1 cut(s) 12
MaeIII GTNAC 2 cut(s) 181, 569
MalI GATC 3 cut(s) 213, 825, 1160
MboI GATC 3 cut(s) 211, 823, 1158
MboII GAAGA 2 cut(s) 164, 1168
MfeI CAATTG 1 cut(s) 319
MflI RGATCY 1 cut(s) 823
MhlI GDGCHC 2 cut(s) 371, 1170
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 8 cut(s) 18, 207, 222, 319, 474, 602, 623, 638
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 3 cut(s) 263, 722, 1244
MmeI TCCRAC 1 cut(s) 1078
MnlI CCTC 7 cut(s) 139, 196, 242, 751, 867, 959, 1140
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 283
MroXI GAANNNNTTC 1 cut(s) 556
MscI TGGCCA 1 cut(s) 5
MslI CAYNNNNRTG 4 cut(s) 84, 164, 501, 1173
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 3 cut(s) 422, 1019, 1289
MspI CCGG 3 cut(s) 539, 762, 820
MspR9I CCNGG 4 cut(s) 763, 798, 821, 1224
MunI CAATTG 1 cut(s) 319
Mva1269I GAATGC 1 cut(s) 745
MvaI CCWGG 2 cut(s) 798, 1224
MwoI GCNNNNNNNGC 5 cut(s) 74, 386, 428, 785, 816
NciI CCSGG 2 cut(s) 763, 821
NdeI CATATG 1 cut(s) 489
NdeII GATC 3 cut(s) 211, 823, 1158
NlaIV GGNNCC 4 cut(s) 88, 780, 879, 894
NmuCI GTSAC 1 cut(s) 181
NsiI ATGCAT 1 cut(s) 283
NspI RCATGY 3 cut(s) 285, 570, 916
PaeI GCATGC 1 cut(s) 285
PagI TCATGA 1 cut(s) 79
PciI ACATGT 2 cut(s) 566, 912
PctI GAATGC 1 cut(s) 745
PdmI GAANNNNTTC 1 cut(s) 556
PfeI GAWTC 2 cut(s) 587, 1266
PkrI GCNGC 8 cut(s) 301, 421, 424, 937, 1021, 1084, 1288, 1291
PleI GAGTC 3 cut(s) 263, 722, 1244
PpsI GAGTC 3 cut(s) 263, 722, 1244
PpuMI RGGWCCY 1 cut(s) 395
PscI ACATGT 2 cut(s) 566, 912
Psp5II RGGWCCY 1 cut(s) 395
Psp6I CCWGG 2 cut(s) 796, 1222
PspEI GGTNACC 1 cut(s) 181
PspFI CCCAGC 1 cut(s) 840
PspGI CCWGG 2 cut(s) 796, 1222
PspN4I GGNNCC 4 cut(s) 88, 780, 879, 894
PspPI GGNCC 2 cut(s) 395, 443
PspPPI RGGWCCY 1 cut(s) 395
PstI CTGCAG 1 cut(s) 301
PsuI RGATCY 1 cut(s) 823
PvuII CAGCTG 2 cut(s) 422, 1019
RsaI GTAC 5 cut(s) 104, 696, 879, 894, 917
RsaNI GTAC 5 cut(s) 103, 695, 878, 893, 916
RseI CAYNNNNRTG 4 cut(s) 84, 164, 501, 1173
SalI GTCGAC 2 cut(s) 29, 1247
SatI GCNGC 8 cut(s) 300, 420, 423, 936, 1020, 1083, 1287, 1290
Sau3AI GATC 3 cut(s) 211, 823, 1158
Sau96I GGNCC 2 cut(s) 395, 443
SchI GAGTC 3 cut(s) 263, 722, 1244
ScrFI CCNGG 4 cut(s) 763, 798, 821, 1224
SduI GDGCHC 2 cut(s) 371, 1170
SfaNI GCATC 5 cut(s) 439, 643, 845, 932, 1273
SfcI CTRYAG 1 cut(s) 297
SinI GGWCC 2 cut(s) 395, 443
SmiMI CAYNNNNRTG 4 cut(s) 84, 164, 501, 1173
SmlI CTYRAG 1 cut(s) 194
SmoI CTYRAG 1 cut(s) 194
SphI GCATGC 1 cut(s) 285
Sse9I AATT 8 cut(s) 18, 207, 222, 319, 474, 602, 623, 638
SsiI CCGC 3 cut(s) 380, 985, 1287
SspMI CTAG 1 cut(s) 528
StyD4I CCNGG 4 cut(s) 761, 796, 819, 1222
StyI CCWWGG 1 cut(s) 69
TaaI ACNGT 4 cut(s) 178, 377, 996, 1325
TaiI ACGT 1 cut(s) 15
TaqI TCGA 3 cut(s) 30, 234, 1248
TasI AATT 8 cut(s) 18, 207, 222, 319, 474, 602, 623, 638
TatI WGTACW 2 cut(s) 102, 915
TauI GCSGC 1 cut(s) 1289
TfiI GAWTC 2 cut(s) 587, 1266
TscAI CASTG 4 cut(s) 183, 376, 382, 925
TseFI GTSAC 1 cut(s) 181
TseI GCWGC 7 cut(s) 299, 419, 422, 935, 1019, 1082, 1289
Tsp45I GTSAC 1 cut(s) 181
TspDTI ATGAA 3 cut(s) 662, 1106, 1169
TspRI CASTG 4 cut(s) 183, 376, 382, 925
VneI GTGCAC 1 cut(s) 367
VpaK11BI GGWCC 2 cut(s) 395, 443
XapI RAATTY 1 cut(s) 18
XceI RCATGY 3 cut(s) 285, 570, 916
XmiI GTMKAC 2 cut(s) 30, 1248
XmnI GAANNNNTTC 1 cut(s) 556
XspI CTAG 1 cut(s) 528
Zsp2I ATGCAT 1 cut(s) 283
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.