Ribosomal protein S1-like RNA-binding domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G12800 |
| fragaria_vesca | FvH4_5g01950 FvH4_5g01950 FvH4_5g01950 FvH4_5g01950 |
| malus_domestica | MD06G1077900.v1.1 MD14G1098600.v1.1 MD14G1098700.v1.1 |
| prunus_persica | Prupe.5G095700_v2.0.a1 Prupe.5G095700_v2.0.a1 |
| pyrus_communis | pycom06g07570 |
| rosa_chinensis | RchiOBHm_Chr7g0198431 |
| rosa_laevigata | RLG00000003868 |
| rosa_multiflora | Rmu_sc0001250.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00257700 |
| rosa_rugosa | Rorug07G0047900 |
| rosa_samantha | Rh7AG171700 Rh7BG174500 Rh7CG181100 Rh7DG173600 |
| rosa_wichuraiana | Rw7G014990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 486, 1565, 2117 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 779 |
| Acc65I | GGTACC | 2 cut(s) | 334, 382 |
| AccB1I | GGYRCC | 3 cut(s) | 334, 382, 451 |
| AccI | GTMKAC | 1 cut(s) | 771 |
| AciI | CCGC | 2 cut(s) | 116, 719 |
| AclWI | GGATC | 7 cut(s) | 982, 1502, 1544, 1557, 1898, 1911, 2003 |
| AcoI | YGGCCR | 3 cut(s) | 1660, 1689, 1773 |
| AcsI | RAATTY | 9 cut(s) | 63, 108, 131, 194, 470, 643, 1486, 1640, 2335 |
| AcuI | CTGAAG | 1 cut(s) | 2157 |
| AcyI | GRCGYC | 2 cut(s) | 520, 873 |
| AfaI | GTAC | 6 cut(s) | 336, 384, 547, 1478, 2234, 2265 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 344, 392, 461, 1265 |
| AgeI | ACCGGT | 1 cut(s) | 448 |
| AjnI | CCWGG | 3 cut(s) | 398, 1545, 1626 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1409, 1441 |
| AluBI | AGCT | 5 cut(s) | 269, 1433, 1711, 2125, 2189 |
| AluI | AGCT | 5 cut(s) | 269, 1433, 1711, 2125, 2189 |
| Alw21I | GWGCWC | 1 cut(s) | 1064 |
| Alw26I | GTCTC | 3 cut(s) | 511, 1444, 1772 |
| AlwI | GGATC | 7 cut(s) | 982, 1502, 1544, 1557, 1898, 1911, 2003 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2090 |
| Ama87I | CYCGRG | 1 cut(s) | 2179 |
| AoxI | GGCC | 6 cut(s) | 395, 1660, 1689, 1727, 1773, 2022 |
| ApaI | GGGCCC | 1 cut(s) | 399 |
| ApeKI | GCWGC | 3 cut(s) | 1806, 2075, 2125 |
| ApoI | RAATTY | 9 cut(s) | 63, 108, 131, 194, 470, 643, 1486, 1640, 2335 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1770, 1802 |
| AseI | ATTAAT | 1 cut(s) | 1865 |
| AsiGI | ACCGGT | 1 cut(s) | 448 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1608 |
| Asp718I | GGTACC | 2 cut(s) | 334, 382 |
| AspS9I | GGNCC | 4 cut(s) | 178, 217, 395, 396 |
| AsuC2I | CCSGG | 2 cut(s) | 2180, 2181 |
| AsuHPI | GGTGA | 8 cut(s) | 10, 16, 664, 733, 800, 1248, 1578, 2054 |
| AsuNHI | GCTAGC | 1 cut(s) | 1346 |
| AvaI | CYCGRG | 1 cut(s) | 2179 |
| AvaII | GGWCC | 2 cut(s) | 178, 217 |
| BaeGI | GKGCMC | 1 cut(s) | 399 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2310, 2343 |
| BalI | TGGCCA | 3 cut(s) | 1662, 1691, 1775 |
| BamHI | GGATCC | 2 cut(s) | 1549, 1903 |
| BanI | GGYRCC | 3 cut(s) | 334, 382, 451 |
| BanII | GRGCYC | 2 cut(s) | 399, 2180 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1396, 1428 |
| BbsI | GAAGAC | 1 cut(s) | 100 |
| Bbv12I | GWGCWC | 1 cut(s) | 1064 |
| BbvI | GCAGC | 3 cut(s) | 1793, 2087, 2112 |
| BccI | CCATC | 6 cut(s) | 386, 422, 1477, 1878, 2011, 2054 |
| BceAI | ACGGC | 1 cut(s) | 22 |
| BciT130I | CCWGG | 3 cut(s) | 400, 1547, 1628 |
| BcnI | CCSGG | 2 cut(s) | 2180, 2181 |
| BcoDI | GTCTC | 3 cut(s) | 511, 1444, 1772 |
| BfaI | CTAG | 7 cut(s) | 60, 98, 167, 762, 987, 1347, 2309 |
| BfmI | CTRYAG | 1 cut(s) | 1143 |
| BisI | GCNGC | 3 cut(s) | 1807, 2076, 2126 |
| BlpI | GCTNAGC | 1 cut(s) | 2185 |
| BlsI | GCNGC | 3 cut(s) | 1808, 2077, 2127 |
| Bme1390I | CCNGG | 5 cut(s) | 400, 1547, 1628, 2180, 2181 |
| Bme18I | GGWCC | 2 cut(s) | 178, 217 |
| BmeT110I | CYCGRG | 1 cut(s) | 2179 |
| BmgT120I | GGNCC | 4 cut(s) | 178, 217, 395, 396 |
| BmiI | GGNNCC | 7 cut(s) | 219, 336, 384, 397, 453, 1551, 1905 |
| BmrFI | CCNGG | 5 cut(s) | 400, 1547, 1628, 2180, 2181 |
| BmrI | ACTGGG | 1 cut(s) | 518 |
| BmsI | GCATC | 8 cut(s) | 781, 1208, 1262, 1267, 1818, 1882, 1986, 2222 |
| BmtI | GCTAGC | 1 cut(s) | 1350 |
| BmuI | ACTGGG | 1 cut(s) | 518 |
| BpiI | GAAGAC | 1 cut(s) | 100 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2185 |
| BpuEI | CTTGAG | 2 cut(s) | 929, 2194 |
| BpuMI | CCSGG | 2 cut(s) | 2180, 2181 |
| BsaHI | GRCGYC | 2 cut(s) | 520, 873 |
| BsaJI | CCNNGG | 6 cut(s) | 161, 398, 423, 1020, 2025, 2179 |
| BsaWI | WCCGGW | 1 cut(s) | 448 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 344, 392, 461, 1265 |
| Bse118I | RCCGGY | 1 cut(s) | 448 |
| Bse1I | ACTGG | 6 cut(s) | 180, 524, 924, 1962, 2146, 2283 |
| BseBI | CCWGG | 3 cut(s) | 400, 1547, 1628 |
| BseDI | CCNNGG | 6 cut(s) | 161, 398, 423, 1020, 2025, 2179 |
| BseGI | GGATG | 8 cut(s) | 77, 433, 607, 1030, 1798, 1897, 2065, 2213 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 344, 392, 461, 1265 |
| BseMII | CTCAG | 2 cut(s) | 506, 2082 |
| BseNI | ACTGG | 6 cut(s) | 180, 524, 924, 1962, 2146, 2283 |
| BseRI | GAGGAG | 1 cut(s) | 1329 |
| BseSI | GKGCMC | 1 cut(s) | 399 |
| BseXI | GCAGC | 3 cut(s) | 1793, 2087, 2112 |
| BsgI | GTGCAG | 1 cut(s) | 1137 |
| Bsh1285I | CGRYCG | 2 cut(s) | 202, 449 |
| BshFI | GGCC | 6 cut(s) | 397, 1662, 1691, 1729, 1775, 2024 |
| BshNI | GGYRCC | 3 cut(s) | 334, 382, 451 |
| BshTI | ACCGGT | 1 cut(s) | 448 |
| BsiEI | CGRYCG | 2 cut(s) | 202, 449 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1064 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2179 |
| BsiSI | CCGG | 2 cut(s) | 449, 2180 |
| BslFI | GGGAC | 1 cut(s) | 1281 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 344, 392, 461, 1265 |
| BsmAI | GTCTC | 3 cut(s) | 511, 1444, 1772 |
| BsmBI | CGTCTC | 2 cut(s) | 511, 1444 |
| BsmFI | GGGAC | 1 cut(s) | 1281 |
| BsmI | GAATGC | 1 cut(s) | 1531 |
| BsnI | GGCC | 6 cut(s) | 397, 1662, 1691, 1729, 1775, 2024 |
| BsoBI | CYCGRG | 1 cut(s) | 2179 |
| Bsp120I | GGGCCC | 1 cut(s) | 395 |
| Bsp1286I | GDGCHC | 3 cut(s) | 399, 1064, 2180 |
| Bsp1407I | TGTACA | 1 cut(s) | 1476 |
| Bsp143I | GATC | 9 cut(s) | 207, 974, 1494, 1549, 1903, 2008, 2044, 2249, 2311 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2185 |
| BspACI | CCGC | 2 cut(s) | 116, 719 |
| BspANI | GGCC | 6 cut(s) | 397, 1662, 1691, 1729, 1775, 2024 |
| BspCNI | CTCAG | 2 cut(s) | 507, 2083 |
| BspLI | GGNNCC | 7 cut(s) | 219, 336, 384, 397, 453, 1551, 1905 |
| BspOI | GCTAGC | 1 cut(s) | 1350 |
| BspPI | GGATC | 7 cut(s) | 982, 1502, 1544, 1557, 1898, 1911, 2003 |
| BspQI | GCTCTTC | 2 cut(s) | 150, 1536 |
| BspT107I | GGYRCC | 3 cut(s) | 334, 382, 451 |
| BsrFI | RCCGGY | 1 cut(s) | 448 |
| BsrGI | TGTACA | 1 cut(s) | 1476 |
| BsrI | ACTGG | 6 cut(s) | 180, 524, 924, 1962, 2146, 2283 |
| BssAI | RCCGGY | 1 cut(s) | 448 |
| BssECI | CCNNGG | 6 cut(s) | 161, 398, 423, 1020, 2025, 2179 |
| BssMI | GATC | 9 cut(s) | 207, 974, 1494, 1549, 1903, 2008, 2044, 2249, 2311 |
| BssNI | GRCGYC | 2 cut(s) | 520, 873 |
| BssT1I | CCWWGG | 3 cut(s) | 423, 1020, 2025 |
| Bst2UI | CCWGG | 3 cut(s) | 400, 1547, 1628 |
| Bst4CI | ACNGT | 4 cut(s) | 1007, 1104, 1403, 1900 |
| Bst6I | CTCTTC | 4 cut(s) | 150, 1074, 1536, 1737 |
| BstACI | GRCGYC | 2 cut(s) | 520, 873 |
| BstAUI | TGTACA | 1 cut(s) | 1476 |
| BstC8I | GCNNGC | 2 cut(s) | 1348, 1860 |
| BstDEI | CTNAG | 6 cut(s) | 351, 515, 1429, 1462, 2091, 2185 |
| BstF5I | GGATG | 8 cut(s) | 77, 433, 607, 1030, 1798, 1897, 2065, 2213 |
| BstKTI | GATC | 9 cut(s) | 210, 977, 1497, 1552, 1906, 2011, 2047, 2252, 2314 |
| BstMAI | GTCTC | 3 cut(s) | 511, 1444, 1772 |
| BstMBI | GATC | 9 cut(s) | 207, 974, 1494, 1549, 1903, 2008, 2044, 2249, 2311 |
| BstMCI | CGRYCG | 2 cut(s) | 202, 449 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 210, 1054, 2081 |
| BstNI | CCWGG | 3 cut(s) | 400, 1547, 1628 |
| BstSCI | CCNGG | 5 cut(s) | 398, 1545, 1626, 2178, 2179 |
| BstSFI | CTRYAG | 1 cut(s) | 1143 |
| BstSLI | GKGCMC | 1 cut(s) | 399 |
| BstV1I | GCAGC | 3 cut(s) | 1793, 2087, 2112 |
| BstV2I | GAAGAC | 1 cut(s) | 100 |
| BstX2I | RGATCY | 4 cut(s) | 974, 1549, 1903, 2008 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 244, 538 |
| BstYI | RGATCY | 4 cut(s) | 974, 1549, 1903, 2008 |
| BsuRI | GGCC | 6 cut(s) | 397, 1662, 1691, 1729, 1775, 2024 |
| BtsCI | GGATG | 8 cut(s) | 77, 433, 607, 1030, 1798, 1897, 2065, 2213 |
| BtsI | GCAGTG | 1 cut(s) | 1149 |
| BtsIMutI | CAGTG | 6 cut(s) | 173, 930, 931, 1149, 1728, 1896 |
| Cac8I | GCNNGC | 2 cut(s) | 1348, 1860 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2090 |
| Cfr10I | RCCGGY | 1 cut(s) | 448 |
| Cfr13I | GGNCC | 4 cut(s) | 178, 217, 395, 396 |
| Cfr9I | CCCGGG | 1 cut(s) | 2179 |
| CseI | GACGC | 2 cut(s) | 528, 862 |
| Csp6I | GTAC | 6 cut(s) | 335, 383, 546, 1477, 2233, 2264 |
| CspAI | ACCGGT | 1 cut(s) | 448 |
| CviAII | CATG | 5 cut(s) | 1271, 1443, 1771, 2218, 2349 |
| CviQI | GTAC | 6 cut(s) | 335, 383, 546, 1477, 2233, 2264 |
| DdeI | CTNAG | 6 cut(s) | 351, 515, 1429, 1462, 2091, 2185 |
| DpnI | GATC | 9 cut(s) | 209, 976, 1496, 1551, 1905, 2010, 2046, 2251, 2313 |
| DpnII | GATC | 9 cut(s) | 207, 974, 1494, 1549, 1903, 2008, 2044, 2249, 2311 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 779 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 779 |
| EaeI | YGGCCR | 3 cut(s) | 1660, 1689, 1773 |
| Eam1104I | CTCTTC | 4 cut(s) | 150, 1074, 1536, 1737 |
| EarI | CTCTTC | 4 cut(s) | 150, 1074, 1536, 1737 |
| Eco130I | CCWWGG | 3 cut(s) | 423, 1020, 2025 |
| Eco147I | AGGCCT | 1 cut(s) | 2024 |
| Eco24I | GRGCYC | 2 cut(s) | 399, 2180 |
| Eco47I | GGWCC | 2 cut(s) | 178, 217 |
| Eco57I | CTGAAG | 1 cut(s) | 2157 |
| Eco88I | CYCGRG | 1 cut(s) | 2179 |
| EcoO109I | RGGNCCY | 1 cut(s) | 217 |
| EcoRI | GAATTC | 1 cut(s) | 63 |
| EcoRII | CCWGG | 3 cut(s) | 398, 1545, 1626 |
| EcoT14I | CCWWGG | 3 cut(s) | 423, 1020, 2025 |
| EcoT38I | GRGCYC | 2 cut(s) | 399, 2180 |
| ErhI | CCWWGG | 3 cut(s) | 423, 1020, 2025 |
| Esp3I | CGTCTC | 2 cut(s) | 511, 1444 |
| FaeI | CATG | 5 cut(s) | 1274, 1446, 1774, 2221, 2352 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1596, 1628 |
| FaqI | GGGAC | 1 cut(s) | 1281 |
| FatI | CATG | 5 cut(s) | 1270, 1442, 1770, 2217, 2348 |
| FauI | CCCGC | 1 cut(s) | 123 |
| FblI | GTMKAC | 1 cut(s) | 771 |
| Fnu4HI | GCNGC | 3 cut(s) | 1807, 2076, 2126 |
| FokI | GGATG | 8 cut(s) | 64, 440, 614, 1037, 1805, 1904, 2072, 2200 |
| FriOI | GRGCYC | 2 cut(s) | 399, 2180 |
| Fsp4HI | GCNGC | 3 cut(s) | 1807, 2076, 2126 |
| FspBI | CTAG | 7 cut(s) | 60, 98, 167, 762, 987, 1347, 2309 |
| GluI | GCNGC | 3 cut(s) | 1807, 2076, 2126 |
| HaeIII | GGCC | 6 cut(s) | 397, 1662, 1691, 1729, 1775, 2024 |
| HapII | CCGG | 2 cut(s) | 449, 2180 |
| HgaI | GACGC | 2 cut(s) | 528, 862 |
| Hin1I | GRCGYC | 2 cut(s) | 520, 873 |
| Hin1II | CATG | 5 cut(s) | 1274, 1446, 1774, 2221, 2352 |
| HindIII | AAGCTT | 1 cut(s) | 1709 |
| HpaII | CCGG | 2 cut(s) | 449, 2180 |
| HphI | GGTGA | 8 cut(s) | 10, 16, 664, 733, 800, 1248, 1578, 2054 |
| Hpy166II | GTNNAC | 4 cut(s) | 772, 1100, 1519, 1951 |
| Hpy188I | TCNGA | 5 cut(s) | 502, 1108, 1875, 1932, 2254 |
| Hpy8I | GTNNAC | 4 cut(s) | 772, 1100, 1519, 1951 |
| Hpy99I | CGWCG | 3 cut(s) | 625, 878, 1577 |
| HpyAV | CCTTC | 8 cut(s) | 373, 955, 986, 1450, 1732, 1844, 1917, 2132 |
| HpyCH4III | ACNGT | 4 cut(s) | 1007, 1104, 1403, 1900 |
| HpyCH4IV | ACGT | 1 cut(s) | 544 |
| HpyCH4V | TGCA | 7 cut(s) | 794, 983, 1154, 1253, 1809, 1862, 2128 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 210, 1054, 2081 |
| HpyF3I | CTNAG | 6 cut(s) | 351, 515, 1429, 1462, 2091, 2185 |
| HpySE526I | ACGT | 1 cut(s) | 544 |
| Hsp92I | GRCGYC | 2 cut(s) | 520, 873 |
| Hsp92II | CATG | 5 cut(s) | 1274, 1446, 1774, 2221, 2352 |
| KpnI | GGTACC | 2 cut(s) | 338, 386 |
| Kzo9I | GATC | 9 cut(s) | 207, 974, 1494, 1549, 1903, 2008, 2044, 2249, 2311 |
| LguI | GCTCTTC | 2 cut(s) | 150, 1536 |
| LmnI | GCTCC | 1 cut(s) | 2194 |
| Lsp1109I | GCAGC | 3 cut(s) | 1793, 2087, 2112 |
| LweI | GCATC | 8 cut(s) | 781, 1208, 1262, 1267, 1818, 1882, 1986, 2222 |
| MaeI | CTAG | 7 cut(s) | 60, 98, 167, 762, 987, 1347, 2309 |
| MaeII | ACGT | 1 cut(s) | 544 |
| MaeIII | GTNAC | 1 cut(s) | 2238 |
| MalI | GATC | 9 cut(s) | 209, 976, 1496, 1551, 1905, 2010, 2046, 2251, 2313 |
| MboI | GATC | 9 cut(s) | 207, 974, 1494, 1549, 1903, 2008, 2044, 2249, 2311 |
| MflI | RGATCY | 4 cut(s) | 974, 1549, 1903, 2008 |
| MhlI | GDGCHC | 3 cut(s) | 399, 1064, 2180 |
| MlsI | TGGCCA | 3 cut(s) | 1662, 1691, 1775 |
| MluNI | TGGCCA | 3 cut(s) | 1662, 1691, 1775 |
| MlyI | GAGTC | 7 cut(s) | 474, 1022, 1079, 1241, 1448, 1754, 2039 |
| MmeI | TCCRAC | 4 cut(s) | 54, 386, 2216, 2324 |
| Mox20I | TGGCCA | 3 cut(s) | 1662, 1691, 1775 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1608 |
| MscI | TGGCCA | 3 cut(s) | 1662, 1691, 1775 |
| MseI | TTAA | 9 cut(s) | 342, 507, 1206, 1308, 1382, 1536, 1865, 1991, 2156 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1187, 1275 |
| Msp20I | TGGCCA | 3 cut(s) | 1662, 1691, 1775 |
| MspI | CCGG | 2 cut(s) | 449, 2180 |
| MspR9I | CCNGG | 5 cut(s) | 400, 1547, 1628, 2180, 2181 |
| Mva1269I | GAATGC | 1 cut(s) | 1531 |
| MvaI | CCWGG | 3 cut(s) | 400, 1547, 1628 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 210, 1054, 2081 |
| NciI | CCSGG | 2 cut(s) | 2180, 2181 |
| NdeII | GATC | 9 cut(s) | 207, 974, 1494, 1549, 1903, 2008, 2044, 2249, 2311 |
| NheI | GCTAGC | 1 cut(s) | 1346 |
| NlaIII | CATG | 5 cut(s) | 1274, 1446, 1774, 2221, 2352 |
| NlaIV | GGNNCC | 7 cut(s) | 219, 336, 384, 397, 453, 1551, 1905 |
| NmeAIII | GCCGAG | 1 cut(s) | 186 |
| PceI | AGGCCT | 1 cut(s) | 2024 |
| PciSI | GCTCTTC | 2 cut(s) | 150, 1536 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1794 |
| PctI | GAATGC | 1 cut(s) | 1531 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1608 |
| PfeI | GAWTC | 7 cut(s) | 913, 920, 1016, 1240, 2108, 2142, 2227 |
| PinAI | ACCGGT | 1 cut(s) | 448 |
| PkrI | GCNGC | 3 cut(s) | 1808, 2077, 2127 |
| PleI | GAGTC | 7 cut(s) | 473, 1022, 1078, 1240, 1447, 1753, 2038 |
| PpsI | GAGTC | 7 cut(s) | 473, 1022, 1078, 1240, 1447, 1753, 2038 |
| PpuMI | RGGWCCY | 1 cut(s) | 217 |
| PshBI | ATTAAT | 1 cut(s) | 1865 |
| PsiI | TTATAA | 3 cut(s) | 486, 1565, 2117 |
| Psp5II | RGGWCCY | 1 cut(s) | 217 |
| Psp6I | CCWGG | 3 cut(s) | 398, 1545, 1626 |
| PspGI | CCWGG | 3 cut(s) | 398, 1545, 1626 |
| PspN4I | GGNNCC | 7 cut(s) | 219, 336, 384, 397, 453, 1551, 1905 |
| PspOMI | GGGCCC | 1 cut(s) | 395 |
| PspPI | GGNCC | 4 cut(s) | 178, 217, 395, 396 |
| PspPPI | RGGWCCY | 1 cut(s) | 217 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2090 |
| PsuI | RGATCY | 4 cut(s) | 974, 1549, 1903, 2008 |
| RsaI | GTAC | 6 cut(s) | 336, 384, 547, 1478, 2234, 2265 |
| RsaNI | GTAC | 6 cut(s) | 335, 383, 546, 1477, 2233, 2264 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1187, 1275 |
| SapI | GCTCTTC | 2 cut(s) | 150, 1536 |
| SaqAI | TTAA | 9 cut(s) | 342, 507, 1206, 1308, 1382, 1536, 1865, 1991, 2156 |
| SatI | GCNGC | 3 cut(s) | 1807, 2076, 2126 |
| Sau3AI | GATC | 9 cut(s) | 207, 974, 1494, 1549, 1903, 2008, 2044, 2249, 2311 |
| Sau96I | GGNCC | 4 cut(s) | 178, 217, 395, 396 |
| SchI | GAGTC | 7 cut(s) | 474, 1022, 1079, 1241, 1448, 1754, 2039 |
| ScrFI | CCNGG | 5 cut(s) | 400, 1547, 1628, 2180, 2181 |
| SduI | GDGCHC | 3 cut(s) | 399, 1064, 2180 |
| SfaNI | GCATC | 8 cut(s) | 781, 1208, 1262, 1267, 1818, 1882, 1986, 2222 |
| SfcI | CTRYAG | 1 cut(s) | 1143 |
| SinI | GGWCC | 2 cut(s) | 178, 217 |
| SmaI | CCCGGG | 1 cut(s) | 2181 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1187, 1275 |
| SmlI | CTYRAG | 2 cut(s) | 908, 2173 |
| SmoI | CTYRAG | 2 cut(s) | 908, 2173 |
| SrfI | GCCCGGGC | 1 cut(s) | 2181 |
| SseBI | AGGCCT | 1 cut(s) | 2024 |
| SsiI | CCGC | 2 cut(s) | 116, 719 |
| SspMI | CTAG | 7 cut(s) | 60, 98, 167, 762, 987, 1347, 2309 |
| StuI | AGGCCT | 1 cut(s) | 2024 |
| StyD4I | CCNGG | 5 cut(s) | 398, 1545, 1626, 2178, 2179 |
| StyI | CCWWGG | 3 cut(s) | 423, 1020, 2025 |
| TaaI | ACNGT | 4 cut(s) | 1007, 1104, 1403, 1900 |
| TaiI | ACGT | 1 cut(s) | 547 |
| TaqI | TCGA | 4 cut(s) | 445, 623, 876, 2248 |
| TaqII | GACCGA | 1 cut(s) | 188 |
| TatI | WGTACW | 3 cut(s) | 1476, 2232, 2263 |
| TfiI | GAWTC | 7 cut(s) | 913, 920, 1016, 1240, 2108, 2142, 2227 |
| Tru1I | TTAA | 9 cut(s) | 342, 507, 1206, 1308, 1382, 1536, 1865, 1991, 2156 |
| Tru9I | TTAA | 9 cut(s) | 342, 507, 1206, 1308, 1382, 1536, 1865, 1991, 2156 |
| TscAI | CASTG | 6 cut(s) | 180, 931, 937, 1156, 1728, 1903 |
| TseI | GCWGC | 3 cut(s) | 1806, 2075, 2125 |
| TspDTI | ATGAA | 9 cut(s) | 66, 124, 206, 624, 843, 1092, 1287, 1610, 1902 |
| TspGWI | ACGGA | 2 cut(s) | 1468, 1590 |
| TspMI | CCCGGG | 1 cut(s) | 2179 |
| TspRI | CASTG | 6 cut(s) | 180, 931, 937, 1156, 1728, 1903 |
| VpaK11BI | GGWCC | 2 cut(s) | 178, 217 |
| VspI | ATTAAT | 1 cut(s) | 1865 |
| XapI | RAATTY | 9 cut(s) | 63, 108, 131, 194, 470, 643, 1486, 1640, 2335 |
| XmaI | CCCGGG | 1 cut(s) | 2179 |
| XmiI | GTMKAC | 1 cut(s) | 771 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1608 |
| XspI | CTAG | 7 cut(s) | 60, 98, 167, 762, 987, 1347, 2309 |