Rw7G014990

Ribosomal protein S1-like RNA-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0010383
Physical Location & Seq
Forward (+)
14872634 .. 14878445
5812 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G014990.1

Sequence Viewer

Length: 2457 bp
ATGGACAGTTTCTCTCTCACCCTTACCACCAACACCCCTTTCTTTACTACCCGGACTCCTTTTCCTTCACTTTCAAGAATAACAAACCCAGTTTTCCCTCCAAAAAATACCAAGTTCATTGCTTGCAGCTCCAAAGACGAGCCCAAGCTCGACCCTTTGGACCAAATGGAGCTCAAGTTCGGTCGTATGATCGGTGAAGACCCAAAACTTACACTTGCCAAGATATTGGGTAGGAAAGCAAACCCTGAAGCTAGTTATATGGAAATTGAGAAAAGCTTTTACAAGAACAAGGGTAAGATAGTTGAGATAAAGGAGGTGCCTTTTGGTGTGCCCAAGAATGCTCAGGCATCTAAATCCTCGGAGGGTGTGGATATGGTTAGACCTGTGCCAAAGAAAGTTCAGTCATCTCCCTTGGATGGTTTGAACTTGGTTAGGCCAGTGCCGAAAAAAGGAGTTAAGTTTGAGGTTGATGATAAGCCAACAAGGTCTGAGGTTAAGAAATTGAGTAGTCCTGTTGCACCCAAGGCTGGGGAGGGTAGTAAAGGTAGTGTTCCTAATGTTATTTTGAGAAAGCCGAGTTTGTTTAGTGAGGATGATGTTGAAGATACGCGGCCGAGGCTGAGGATTAAACCGAATTTGTCGTTGAAGATGAGGATTGAGCAACCCAAGGAGCAGTTTAGTGATATGACATTGTTGAGAAAGCCCGAGCCGGTGAGTGTTGATGAAAGTAGAGAAAAGGAACAAGAGCAATCATCTGGTAATGTAGATAGAAAGGCCATTGGTGATATGACATTGTTGAGAAAACCCGAGGCAGAGAGTGTTAATGGAAGTAGTGAAAAGAAACAAAAGCAATCTAGCAGTGTAGATAGGAGTGTTATTGGTGACGCAGAAATGGAGATGTGGAGTGAAGAAGTCAATAATAAAGTTAGTGGTTTCACTCTATTGGAAAAGCCCAAAGCATTGAGTATCGAAAAAAAGATTGAAAGGGATGATGAGGAATCTGAGCAAGAAGAATCTAGTGTTATTGATGATACTGAAAATAATGGCTGCAAGGATTTGTCTGAAGTTGCTGCAACGAGCAAGCCAAGACGACCCAGTCTCGAAGAATCCAGGGATGGTTTACATACAAAGATTCCCTGTCAAACAGATGATTACCCTATAGGATTACAGCCACATAAGCAGAGCACTATGGTGTCCAGTAAGGAGGTTACTGCTGAGGATGAAATGTCTAGTAGAAGTTCACCTGTTTCTAATGTTGAATTTTCTGTAGATGCTGCTCTACAAGGAAAACCAAAATGGTTGGACAAGCCTGTGAGAGAAGCGTCTGTGAATGCAGAAACCATTGCTGTTGAGCTTGAGAATCCCATTTCTACATCTGCCAGTGGACATGAAGACGCCGATTGGATTGCAGCTGAAGAATTGGTTAAGACTGGAGATAGGGGAGATGTAGAACTTATAAGTGCTAGCACCAGAGGTTTTGTTGTATCTTTTCGCTCATTAGTAGGATTTCTGCCATACCGTAATCTGGCTTTCAAGTGGAAATTCTTAGCTTTTGAGTCATGGTTAAGACGAAAGGGTTTAGATCCATCCTTGTACAGGCGAAATCTTGGAATTATTGGAAGCTATGATGTCACAAACAAGATTAATCCAAGCCTAGAAAATGATGATATAGTTATTAAAAATGAGGGAGAAGTTACACCGGATATGAAACTGGAAGAACTTCTTGGGATATATGACCAAGAAAAAATCAAATTCTTGTCATCATTTGTTGGCCAGAAAGTCAAAGTAAATGTGGTATTGGCCAACAAAAAATCTGGGAAACTTGTATTTTCAGTGAGGCCAAAAGAGAAGGAAGAGTCAGTTGAGAGAAAAAGAAGTCTCATGGCAAAACTTCAAGTCGGCGATGTCGTGAAATGCTGCATCAAGAAAATTACTTATTTTGGTGTTTTTGTTGAGGTCGAAGGAGTGCCTGCACTAATCCATCAGACAGAAATATCTTGGGATGCCACTGTGGATCCTTCTTCTTACTTTAAAGTTGGTCAGATTGTCGAGGCAAAAGTTTGCCAACTGGATTTTGCACTTGAACGCATCTTCTTGTCATTGAAGGAGATTATGCCAGATCCGTTGATGGAGACCTTGGAGTCGGTGGTTGGTGATAATAAGACCCTGGACGGGAGATTAAAAGCAGCACAAGCAGATACTGAGTGGGATGATGTAGAATCTCTTGTTAAAGAGCTGGAACAGACTGAAGGAATCCAGTCTGTATCAAAAGGTCGTTTTTTCTTGAGCCCAGGATTAGCTCCAACATTTCAGGTTTATATGGCATCCATGTTTGAGAATCAGTACAAGTTACTTGCTCGGTCTGAAAATAAAGTTCAGGAGGTAATAGTTCAAACATCACTGGACAAAGAAGAGATGAAATCTGTGATTCTAAGATGTACCAGCAGGGTAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ribosomal_L21p S1

Protein Analysis

818

Amino Acids

91.41

Weight (kDa)

5.57

Isoelectric Point (pI)

47.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S1 PF00575 630 - 702 3.2e-13 S1 RNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1457
AasI GACNNNNNNGTC 2 cut(s) 1095, 2140
AccB1I GGYRCC 1 cut(s) 316
AccII CGCG 1 cut(s) 610
AciI CCGC 1 cut(s) 610
AclWI GGATC 4 cut(s) 1577, 2009, 2022, 2114
AcoI YGGCCR 3 cut(s) 611, 1771, 1800
AcsI RAATTY 4 cut(s) 634, 1259, 1541, 1751
AcuI CTGAAG 4 cut(s) 267, 1083, 1434, 2268
AcyI GRCGYC 1 cut(s) 1395
AfaI GTAC 3 cut(s) 1595, 2345, 2440
AfiI CCNNNNNNNGG 7 cut(s) 416, 449, 527, 528, 1525, 1596, 2172
AjnI CCWGG 3 cut(s) 1109, 2166, 2290
AjuI GAANNNNNNNTTGG 4 cut(s) 23, 55, 1707, 1739
AleI CACNNNNGTG 1 cut(s) 1190
AloI GAACNNNNNNTCC 2 cut(s) 161, 193
Alw21I GWGCWC 2 cut(s) 174, 1187
Alw26I GTCTC 3 cut(s) 1103, 1883, 2126
AlwI GGATC 4 cut(s) 1577, 2009, 2022, 2114
AlwNI CAGNNNCTG 1 cut(s) 2201
Ama87I CYCGRG 2 cut(s) 704, 806
AoxI GGCC 6 cut(s) 434, 611, 774, 1771, 1800, 1838
ApeKI GCWGC 7 cut(s) 126, 1047, 1070, 1274, 1409, 1917, 2186
ApoI RAATTY 4 cut(s) 634, 1259, 1541, 1751
AseI ATTAAT 1 cut(s) 1644
Asp700I GAANNNNTTC 1 cut(s) 1719
AspS9I GGNCC 1 cut(s) 160
AsuC2I CCSGG 1 cut(s) 52
AsuHPI GGTGA 7 cut(s) 10, 206, 724, 794, 893, 1233, 2165
AsuNHI GCTAGC 1 cut(s) 1463
AvaI CYCGRG 2 cut(s) 704, 806
AvaII GGWCC 1 cut(s) 160
BaeGI GKGCMC 1 cut(s) 333
BalI TGGCCA 2 cut(s) 1773, 1802
BamHI GGATCC 1 cut(s) 2014
BanI GGYRCC 1 cut(s) 316
BanII GRGCYC 3 cut(s) 144, 174, 2291
BbsI GAAGAC 2 cut(s) 204, 1398
Bbv12I GWGCWC 2 cut(s) 174, 1187
BbvCI CCTCAGC 2 cut(s) 620, 1215
BbvI GCAGC 7 cut(s) 138, 1034, 1057, 1261, 1421, 1904, 2198
BccI CCATC 5 cut(s) 410, 1109, 1594, 1989, 2122
BcgI CGANNNNNNTGC 2 cut(s) 1388, 1422
BciT130I CCWGG 3 cut(s) 1111, 2168, 2292
BcnI CCSGG 1 cut(s) 52
BcoDI GTCTC 3 cut(s) 1103, 1883, 2126
BfaI CTAG 7 cut(s) 252, 855, 1017, 1230, 1464, 1655, 2455
BfmI CTRYAG 2 cut(s) 1158, 1266
BisI GCNGC 8 cut(s) 127, 611, 1048, 1071, 1275, 1410, 1918, 2187
BlsI GCNGC 8 cut(s) 128, 612, 1049, 1072, 1276, 1411, 1919, 2188
Bme1390I CCNGG 4 cut(s) 52, 1111, 2168, 2292
Bme18I GGWCC 1 cut(s) 160
BmeT110I CYCGRG 2 cut(s) 704, 806
BmgT120I GGNCC 1 cut(s) 160
BmiI GGNNCC 2 cut(s) 318, 2016
BmrFI CCNGG 4 cut(s) 52, 1111, 2168, 2292
BmrI ACTGGG 2 cut(s) 83, 1089
BmsI GCATC 6 cut(s) 356, 1261, 1929, 1993, 2097, 2333
BmtI GCTAGC 1 cut(s) 1467
BmuI ACTGGG 2 cut(s) 83, 1089
BpiI GAAGAC 2 cut(s) 204, 1398
BpmI CTGGAG 1 cut(s) 1452
Bpu10I CCTNAGC 3 cut(s) 342, 620, 1215
BpuEI CTTGAG 3 cut(s) 158, 1376, 2305
BpuMI CCSGG 1 cut(s) 52
BsaHI GRCGYC 1 cut(s) 1395
BsaI GGTCTC 1 cut(s) 2126
BsaWI WCCGGW 1 cut(s) 1699
BsaXI ACNNNNNCTCC 4 cut(s) 40, 70, 161, 191
Bsc4I CCNNNNNNNGG 7 cut(s) 416, 449, 527, 528, 1525, 1596, 2172
Bse118I RCCGGY 1 cut(s) 709
Bse3DI GCAATG 2 cut(s) 117, 1341
BseBI CCWGG 3 cut(s) 1111, 2168, 2292
BseGI GGATG 9 cut(s) 421, 598, 994, 1120, 1225, 1586, 2008, 2215, 2324
BseLI CCNNNNNNNGG 7 cut(s) 416, 449, 527, 528, 1525, 1596, 2172
BseMI GCAATG 2 cut(s) 117, 1341
BseMII CTCAG 6 cut(s) 356, 480, 611, 993, 1206, 2193
BseSI GKGCMC 1 cut(s) 333
BseX3I CGGCCG 1 cut(s) 611
BseXI GCAGC 7 cut(s) 138, 1034, 1057, 1261, 1421, 1904, 2198
BseYI CCCAGC 1 cut(s) 527
BsgI GTGCAG 1 cut(s) 1956
Bsh1236I CGCG 1 cut(s) 610
Bsh1285I CGRYCG 2 cut(s) 184, 614
BshFI GGCC 6 cut(s) 436, 613, 776, 1773, 1802, 1840
BshNI GGYRCC 1 cut(s) 316
BsiEI CGRYCG 2 cut(s) 184, 614
BsiHKAI GWGCWC 2 cut(s) 174, 1187
BsiHKCI CYCGRG 2 cut(s) 704, 806
BsiSI CCGG 3 cut(s) 52, 710, 1700
BslI CCNNNNNNNGG 7 cut(s) 416, 449, 527, 528, 1525, 1596, 2172
BsmAI GTCTC 3 cut(s) 1103, 1883, 2126
BsmI GAATGC 2 cut(s) 343, 1336
BsnI GGCC 6 cut(s) 436, 613, 776, 1773, 1802, 1840
Bso31I GGTCTC 1 cut(s) 2126
BsoBI CYCGRG 2 cut(s) 704, 806
Bsp1286I GDGCHC 5 cut(s) 144, 174, 333, 1187, 2291
Bsp1407I TGTACA 1 cut(s) 1593
Bsp143I GATC 4 cut(s) 189, 1582, 2014, 2119
BspACI CCGC 1 cut(s) 610
BspANI GGCC 6 cut(s) 436, 613, 776, 1773, 1802, 1840
BspCNI CTCAG 6 cut(s) 355, 481, 612, 994, 1207, 2194
BspFNI CGCG 1 cut(s) 610
BspLI GGNNCC 2 cut(s) 318, 2016
BspOI GCTAGC 1 cut(s) 1467
BspPI GGATC 4 cut(s) 1577, 2009, 2022, 2114
BspT107I GGYRCC 1 cut(s) 316
BspTNI GGTCTC 1 cut(s) 2126
BsrDI GCAATG 2 cut(s) 117, 1341
BsrFI RCCGGY 1 cut(s) 709
BsrGI TGTACA 1 cut(s) 1593
BssAI RCCGGY 1 cut(s) 709
BssMI GATC 4 cut(s) 189, 1582, 2014, 2119
BssNI GRCGYC 1 cut(s) 1395
BssT1I CCWWGG 4 cut(s) 411, 522, 666, 2136
Bst2UI CCWGG 3 cut(s) 1111, 2168, 2292
Bst4CI ACNGT 3 cut(s) 8, 1520, 2011
Bst6I CTCTTC 2 cut(s) 1848, 2406
BstACI GRCGYC 1 cut(s) 1395
BstAUI TGTACA 1 cut(s) 1593
BstC8I GCNNGC 4 cut(s) 124, 1082, 1465, 1971
BstDEI CTNAG 8 cut(s) 342, 489, 620, 1002, 1215, 1546, 2202, 2432
BstENI CCTNNNNNAGG 1 cut(s) 1594
BstF5I GGATG 9 cut(s) 421, 598, 994, 1120, 1225, 1586, 2008, 2215, 2324
BstFNI CGCG 1 cut(s) 610
BstKTI GATC 4 cut(s) 192, 1585, 2017, 2122
BstMAI GTCTC 3 cut(s) 1103, 1883, 2126
BstMBI GATC 4 cut(s) 189, 1582, 2014, 2119
BstMCI CGRYCG 2 cut(s) 184, 614
BstMWI GCNNNNNNNGC 5 cut(s) 524, 616, 1177, 2192, 2451
BstNI CCWGG 3 cut(s) 1111, 2168, 2292
BstSCI CCNGG 4 cut(s) 50, 1109, 2166, 2290
BstSFI CTRYAG 2 cut(s) 1158, 1266
BstSLI GKGCMC 1 cut(s) 333
BstUI CGCG 1 cut(s) 610
BstV1I GCAGC 7 cut(s) 138, 1034, 1057, 1261, 1421, 1904, 2198
BstV2I GAAGAC 2 cut(s) 204, 1398
BstX2I RGATCY 3 cut(s) 1582, 2014, 2119
BstXI CCANNNNNNTGG 1 cut(s) 226
BstYI RGATCY 3 cut(s) 1582, 2014, 2119
BstZI CGGCCG 1 cut(s) 611
BsuRI GGCC 6 cut(s) 436, 613, 776, 1773, 1802, 1840
BtgZI GCGATG 1 cut(s) 1917
BtsCI GGATG 9 cut(s) 421, 598, 994, 1120, 1225, 1586, 2008, 2215, 2324
BtsI GCAGTG 1 cut(s) 865
BtsIMutI CAGTG 6 cut(s) 444, 865, 1387, 1839, 2007, 2399
Cac8I GCNNGC 4 cut(s) 124, 1082, 1465, 1971
CaiI CAGNNNCTG 1 cut(s) 2201
Cfr10I RCCGGY 1 cut(s) 709
Cfr13I GGNCC 1 cut(s) 160
CseI GACGC 3 cut(s) 893, 1311, 1403
Csp6I GTAC 3 cut(s) 1594, 2344, 2439
CviAII CATG 4 cut(s) 1388, 1560, 1882, 2329
CviQI GTAC 3 cut(s) 1594, 2344, 2439
DdeI CTNAG 8 cut(s) 342, 489, 620, 1002, 1215, 1546, 2202, 2432
DpnI GATC 4 cut(s) 191, 1584, 2016, 2121
DpnII GATC 4 cut(s) 189, 1582, 2014, 2119
DraI TTTAAA 1 cut(s) 2032
DrdI GACNNNNNNGTC 2 cut(s) 1095, 2140
DseDI GACNNNNNNGTC 2 cut(s) 1095, 2140
EaeI YGGCCR 3 cut(s) 611, 1771, 1800
EagI CGGCCG 1 cut(s) 611
Eam1104I CTCTTC 2 cut(s) 1848, 2406
EarI CTCTTC 2 cut(s) 1848, 2406
Ecl136II GAGCTC 1 cut(s) 172
EclXI CGGCCG 1 cut(s) 611
Eco130I CCWWGG 4 cut(s) 411, 522, 666, 2136
Eco24I GRGCYC 3 cut(s) 144, 174, 2291
Eco31I GGTCTC 1 cut(s) 2126
Eco47I GGWCC 1 cut(s) 160
Eco52I CGGCCG 1 cut(s) 611
Eco53kI GAGCTC 1 cut(s) 172
Eco57I CTGAAG 4 cut(s) 267, 1083, 1434, 2268
Eco88I CYCGRG 2 cut(s) 704, 806
EcoICRI GAGCTC 1 cut(s) 172
EcoNI CCTNNNNNAGG 1 cut(s) 1594
EcoRII CCWGG 3 cut(s) 1109, 2166, 2290
EcoT14I CCWWGG 4 cut(s) 411, 522, 666, 2136
EcoT38I GRGCYC 3 cut(s) 144, 174, 2291
ErhI CCWWGG 4 cut(s) 411, 522, 666, 2136
FaeI CATG 4 cut(s) 1391, 1563, 1885, 2332
FalI AAGNNNNNCTT 2 cut(s) 1707, 1739
FatI CATG 4 cut(s) 1387, 1559, 1881, 2328
Fnu4HI GCNGC 8 cut(s) 127, 611, 1048, 1071, 1275, 1410, 1918, 2187
FokI GGATG 9 cut(s) 428, 605, 1001, 1127, 1232, 1573, 2015, 2222, 2311
FriOI GRGCYC 3 cut(s) 144, 174, 2291
Fsp4HI GCNGC 8 cut(s) 127, 611, 1048, 1071, 1275, 1410, 1918, 2187
FspBI CTAG 7 cut(s) 252, 855, 1017, 1230, 1464, 1655, 2455
GluI GCNGC 8 cut(s) 127, 611, 1048, 1071, 1275, 1410, 1918, 2187
GsaI CCCAGC 1 cut(s) 531
GsuI CTGGAG 1 cut(s) 1452
HaeIII GGCC 6 cut(s) 436, 613, 776, 1773, 1802, 1840
HapII CCGG 3 cut(s) 52, 710, 1700
HgaI GACGC 3 cut(s) 893, 1311, 1403
Hin1I GRCGYC 1 cut(s) 1395
Hin1II CATG 4 cut(s) 1391, 1563, 1885, 2332
HindIII AAGCTT 1 cut(s) 274
HpaII CCGG 3 cut(s) 52, 710, 1700
HphI GGTGA 7 cut(s) 10, 206, 724, 794, 893, 1233, 2165
Hpy166II GTNNAC 3 cut(s) 1121, 1241, 1385
Hpy188I TCNGA 7 cut(s) 361, 490, 1003, 1063, 1986, 2043, 2365
Hpy188III TCNNGA 6 cut(s) 75, 1100, 1909, 1924, 2284, 2378
Hpy8I GTNNAC 3 cut(s) 1121, 1241, 1385
HpyAV CCTTC 6 cut(s) 75, 1843, 1955, 2028, 2098, 2243
HpyCH4III ACNGT 3 cut(s) 8, 1520, 2011
HpyCH4V TGCA 9 cut(s) 126, 518, 1050, 1073, 1334, 1409, 1920, 1973, 2078
HpyF10VI GCNNNNNNNGC 5 cut(s) 524, 616, 1177, 2192, 2451
HpyF3I CTNAG 8 cut(s) 342, 489, 620, 1002, 1215, 1546, 2202, 2432
Hsp92I GRCGYC 1 cut(s) 1395
Hsp92II CATG 4 cut(s) 1391, 1563, 1885, 2332
Kzo9I GATC 4 cut(s) 189, 1582, 2014, 2119
LmnI GCTCC 4 cut(s) 134, 169, 670, 2305
Lsp1109I GCAGC 7 cut(s) 138, 1034, 1057, 1261, 1421, 1904, 2198
LweI GCATC 6 cut(s) 356, 1261, 1929, 1993, 2097, 2333
MaeI CTAG 7 cut(s) 252, 855, 1017, 1230, 1464, 1655, 2455
MaeIII GTNAC 5 cut(s) 881, 1207, 1630, 1693, 2349
MalI GATC 4 cut(s) 191, 1584, 2016, 2121
MboI GATC 4 cut(s) 189, 1582, 2014, 2119
MflI RGATCY 3 cut(s) 1582, 2014, 2119
MhlI GDGCHC 5 cut(s) 144, 174, 333, 1187, 2291
MlsI TGGCCA 2 cut(s) 1773, 1802
MluCI AATT 9 cut(s) 264, 500, 634, 1259, 1418, 1541, 1611, 1751, 1929
MluNI TGGCCA 2 cut(s) 1773, 1802
MlyI GAGTC 4 cut(s) 49, 1565, 1865, 2150
MmeI TCCRAC 2 cut(s) 1281, 2327
Mox20I TGGCCA 2 cut(s) 1773, 1802
MroXI GAANNNNTTC 1 cut(s) 1719
MscI TGGCCA 2 cut(s) 1773, 1802
MslI CAYNNNNRTG 1 cut(s) 1190
Msp20I TGGCCA 2 cut(s) 1773, 1802
MspA1I CMGCKG 1 cut(s) 1412
MspI CCGG 3 cut(s) 52, 710, 1700
MspR9I CCNGG 4 cut(s) 52, 1111, 2168, 2292
Mva1269I GAATGC 2 cut(s) 343, 1336
MvaI CCWGG 3 cut(s) 1111, 2168, 2292
MvnI CGCG 1 cut(s) 610
MwoI GCNNNNNNNGC 5 cut(s) 524, 616, 1177, 2192, 2451
NciI CCSGG 1 cut(s) 52
NdeII GATC 4 cut(s) 189, 1582, 2014, 2119
NheI GCTAGC 1 cut(s) 1463
NlaIII CATG 4 cut(s) 1391, 1563, 1885, 2332
NlaIV GGNNCC 2 cut(s) 318, 2016
NmeAIII GCCGAG 2 cut(s) 600, 639
NmuCI GTSAC 2 cut(s) 881, 1630
OliI CACNNNNGTG 1 cut(s) 1190
PcsI WCGNNNNNNNCGW 1 cut(s) 1905
PctI GAATGC 2 cut(s) 343, 1336
PdmI GAANNNNTTC 1 cut(s) 1719
PfeI GAWTC 9 cut(s) 998, 1013, 1106, 1132, 1360, 2219, 2253, 2338, 2428
PflFI GACNNNGTC 1 cut(s) 1095
PkrI GCNGC 8 cut(s) 128, 612, 1049, 1072, 1276, 1411, 1919, 2188
PleI GAGTC 4 cut(s) 49, 1564, 1864, 2149
PpsI GAGTC 4 cut(s) 49, 1564, 1864, 2149
PshBI ATTAAT 1 cut(s) 1644
PsiI TTATAA 1 cut(s) 1457
Psp124BI GAGCTC 1 cut(s) 174
Psp6I CCWGG 3 cut(s) 1109, 2166, 2290
PspFI CCCAGC 1 cut(s) 527
PspGI CCWGG 3 cut(s) 1109, 2166, 2290
PspN4I GGNNCC 2 cut(s) 318, 2016
PspPI GGNCC 1 cut(s) 160
PstNI CAGNNNCTG 1 cut(s) 2201
PsuI RGATCY 3 cut(s) 1582, 2014, 2119
PsyI GACNNNGTC 1 cut(s) 1095
PvuII CAGCTG 1 cut(s) 1412
RsaI GTAC 3 cut(s) 1595, 2345, 2440
RsaNI GTAC 3 cut(s) 1594, 2344, 2439
RseI CAYNNNNRTG 1 cut(s) 1190
SacI GAGCTC 1 cut(s) 174
SatI GCNGC 8 cut(s) 127, 611, 1048, 1071, 1275, 1410, 1918, 2187
Sau3AI GATC 4 cut(s) 189, 1582, 2014, 2119
Sau96I GGNCC 1 cut(s) 160
SchI GAGTC 4 cut(s) 49, 1565, 1865, 2150
ScrFI CCNGG 4 cut(s) 52, 1111, 2168, 2292
SduI GDGCHC 5 cut(s) 144, 174, 333, 1187, 2291
SfaNI GCATC 6 cut(s) 356, 1261, 1929, 1993, 2097, 2333
SfcI CTRYAG 2 cut(s) 1158, 1266
SinI GGWCC 1 cut(s) 160
SmiMI CAYNNNNRTG 1 cut(s) 1190
SmlI CTYRAG 3 cut(s) 173, 1355, 2284
SmoI CTYRAG 3 cut(s) 173, 1355, 2284
Sse9I AATT 9 cut(s) 264, 500, 634, 1259, 1418, 1541, 1611, 1751, 1929
SsiI CCGC 1 cut(s) 610
SspMI CTAG 7 cut(s) 252, 855, 1017, 1230, 1464, 1655, 2455
SstI GAGCTC 1 cut(s) 174
StyD4I CCNGG 4 cut(s) 50, 1109, 2166, 2290
StyI CCWWGG 4 cut(s) 411, 522, 666, 2136
TaaI ACNGT 3 cut(s) 8, 1520, 2011
TaqI TCGA 5 cut(s) 150, 969, 1101, 1959, 2049
TaqII GACCGA 2 cut(s) 170, 2349
TasI AATT 9 cut(s) 264, 500, 634, 1259, 1418, 1541, 1611, 1751, 1929
TatI WGTACW 2 cut(s) 1593, 2343
TauI GCSGC 1 cut(s) 613
TfiI GAWTC 9 cut(s) 998, 1013, 1106, 1132, 1360, 2219, 2253, 2338, 2428
TscAI CASTG 6 cut(s) 444, 865, 1387, 1839, 2014, 2406
TseFI GTSAC 2 cut(s) 881, 1630
TseI GCWGC 7 cut(s) 126, 1047, 1070, 1274, 1409, 1917, 2186
Tsp45I GTSAC 2 cut(s) 881, 1630
TspDTI ATGAA 6 cut(s) 106, 738, 1236, 1404, 1721, 2432
TspGWI ACGGA 1 cut(s) 2112
TspRI CASTG 6 cut(s) 444, 865, 1387, 1839, 2014, 2406
Tth111I GACNNNGTC 1 cut(s) 1095
VpaK11BI GGWCC 1 cut(s) 160
VspI ATTAAT 1 cut(s) 1644
XagI CCTNNNNNAGG 1 cut(s) 1594
XapI RAATTY 4 cut(s) 634, 1259, 1541, 1751
XmnI GAANNNNTTC 1 cut(s) 1719
XspI CTAG 7 cut(s) 252, 855, 1017, 1230, 1464, 1655, 2455
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.