Rh7CG181100

Ribosomal protein S1-like RNA-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0010383
Physical Location & Seq
Forward (+)
15639350 .. 15645189
5840 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG181100.1

Sequence Viewer

Length: 2253 bp
ATGGACGGTTTCTCTCTCACCCTTACCACCAACACCCCTTTCTTTACTACCCGGACTCCTTTTCCTTCACTTTCAAGAATAACAAACCCAGTTTTCCCTCCAAAAAATACCAAGTTCATTGCTTGCAGCTCCAAAGATGAGCCCAAGCTGGACCCTTTGGACCAAATGGAGCTCAAGTTCGGTCGCATGATCGGTGAAGACCCAAAACTTACACTTGCCAAGATATTGGGTAGGAAAGCAAACCCAGAAGCTAGTTATATGGAAATTGAGAAAAGCTTTTACAAGAACAAGGGTAAGATAGTTGAGATAAAGGAGGTGCCTTTTGGTGTGCCCAAGAATGCTCAGGCATCTAAATCCTCGGAGGGTGTGGATATGGTTAGACCTGTGCCAAAGAAAGTTCAGTCATCTCCCTTGGATGGTTTGAACTTGGTTAGGCCAGTGCCGAAAAAAGGAGTTAAGTTTGAGGTTGATGATAAGCCAACAAGGTCTGAGGTTAAGAAATTGAGTAGTCCTGTTGCACCCAAGGCTGGGGAGGGTAGTAAAGGTAGTGTTCCTAATGTTATTTTGAGAAAGCCAAGTTTGTTTAGTGAGGATGATGTTGAAGATACGCGGCCGGGGCTGAGGATTAAACCGAATTTGTCGTTGAAGATGAGGATTGAGCAACCCAAGGAGCAGTTTAGTGATATGACATTGTTGAGAAAGCCCGAGCCGGTGAGTGTTGATGAAAGTAGAGAAAAGGAACAAGAGCAATCATCTGGTAATGTAGATAGAAAGGCCATTGGTGATATGACATTGTTGAGAAAACCCGAGGCAGAGAGTGTTAATGGAAGTAGTGAAAAGAAACAAGAGCAATCTAGCAGTGTAGATAGGAGTGTTATTGGTGACGCAGAAATGGAGATGTGGAGTGAAGAAGTCAATAATAAAGCTAGTGGTTTCACTCTATTGGAAAAGCCCAAAGCATTCAGTATCGAAAAAAAGATTGAAAGGGATGATGAGGAATCTGAGCAAGAAGAATCTAGTGTTATTGATGATACTGAAAATAATGGCTGCAAGGATTTGTCTGAAGTTGCTGCAACGAGCAATCCAAGACGACCCAGTCTCGAAGAATCCAGGGATGGTTTACATACAAAGATTCCCTGTCAAACAGATGATTACCCTATAGGATTACAGCCACATAAGCAGAGCACTATGGTGTCCAGTAAGGAGGTTACTGCTGAGGATGAAATGTCTAGTAGAAGTTCACCTGTTTCTAATGTTGAATTTTCTGTAGATGCTGCTCTACAAGGAAAACCAAAACGGTTGGACAAGCCTGTGAAAGAAGCGTCTGTGAATGCAGAAACCATTGCTGTTGAGCTTGAGAATCCCATTTCTACATCTGCCAGTGGACATGAAGATGCCGATTGGATTGCAGCTGAAGAATTGGTTAAGACTGGAGATAGGGGAGATGTAGAACTTATAAGTGCTAGCACCAGAGGTTTTGTTGTATCTTTTCGCTCATTAGTAGGATTTCTGCCTTACCGTAATCTGGCTTTCAAGTGGAAATTCTTAGCTTTTGAGTCATGGTTAAGACGAAAGGGTTTAGATCCATCCTTGTACAGGCGAAATCTTGGAATTATTGGAAGCTATGATGTCACAAACAAGATTAATCCAAGCCTAGAAAATGATGATATAGTTATTAAAAATGAGGGAGAAGTTACACCGGATATGAAACTGGAAGAACTTCTCGGGATATATGACCAAGAAAAAATCAAATTCTTGTCATCATTTGTTGGCCAGAAAGTCAAAGTAAATGTGGTATTGGCCAACAAAAAATCTGGGAAACTTGTATTTTCAGTGAGGCCAAAAGAGAAGGAAGAGTCAGTTGAGAGAAAAAGAAGTCTCATGGCAAAACTTCAAGTCGGCGATGTCGTGAAATGCTGCATCAAGAAAATTACTTATTTTGGTGTTTTTGTTGAGGTCGAAGGAGTGCCTGCACTAATCCATCAGACAGAAATATCTTGGGATGCCACTGTGGATCCTTCTTCTTACTTTAAAGTTGGTCAGATTGTCGAGGCAAAAGTTTACCAACTGGATTTTGCACTTGAACGCATCTTCTTGTCATTGAAGGAGATTATGCCAGATCCGTTGATGGAGACCTTGGAGGCGGTGGTTGGTGATAATAAGACCCTGGATGGGAGATTAAAAGCAGCACAAGCAGATACTGAGGTTATTGCTTTTACATGTTTTTTGGGAACTACTAGTCTGGTTAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ribosomal_L21p S1

Protein Analysis

750

Amino Acids

83.39

Weight (kDa)

5.53

Isoelectric Point (pI)

46.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S1 PF00575 630 - 702 2.7e-13 S1 RNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1457
AasI GACNNNNNNGTC 1 cut(s) 1095
AccB1I GGYRCC 1 cut(s) 316
AccII CGCG 1 cut(s) 610
AciI CCGC 2 cut(s) 610, 2144
AclWI GGATC 4 cut(s) 1577, 2009, 2022, 2114
AcoI YGGCCR 3 cut(s) 611, 1771, 1800
AcsI RAATTY 4 cut(s) 634, 1259, 1541, 1751
AcuI CTGAAG 2 cut(s) 1083, 1434
AfaI GTAC 1 cut(s) 1595
AfiI CCNNNNNNNGG 7 cut(s) 416, 449, 527, 528, 1525, 1596, 2172
AflIII ACRYGT 1 cut(s) 2219
AhlI ACTAGT 1 cut(s) 2237
AjnI CCWGG 2 cut(s) 1109, 2166
AjuI GAANNNNNNNTTGG 2 cut(s) 23, 55
AleI CACNNNNGTG 1 cut(s) 1190
AloI GAACNNNNNNTCC 2 cut(s) 161, 193
Alw21I GWGCWC 2 cut(s) 174, 1187
Alw26I GTCTC 3 cut(s) 1103, 1883, 2126
AlwI GGATC 4 cut(s) 1577, 2009, 2022, 2114
AlwNI CAGNNNCTG 1 cut(s) 2201
Ama87I CYCGRG 3 cut(s) 704, 806, 1724
AoxI GGCC 6 cut(s) 434, 611, 774, 1771, 1800, 1838
ApeKI GCWGC 7 cut(s) 126, 1047, 1070, 1274, 1409, 1917, 2186
ApoI RAATTY 4 cut(s) 634, 1259, 1541, 1751
AseI ATTAAT 1 cut(s) 1644
Asp700I GAANNNNTTC 1 cut(s) 1719
AspS9I GGNCC 2 cut(s) 151, 160
AsuC2I CCSGG 2 cut(s) 52, 615
AsuHPI GGTGA 7 cut(s) 10, 206, 724, 794, 893, 1233, 2165
AsuNHI GCTAGC 1 cut(s) 1463
AvaI CYCGRG 3 cut(s) 704, 806, 1724
AvaII GGWCC 2 cut(s) 151, 160
BaeGI GKGCMC 1 cut(s) 333
BaeI ACNNNNGTAYC 2 cut(s) 2190, 2223
BalI TGGCCA 2 cut(s) 1773, 1802
BamHI GGATCC 1 cut(s) 2014
BanI GGYRCC 1 cut(s) 316
BanII GRGCYC 2 cut(s) 144, 174
BbsI GAAGAC 1 cut(s) 204
Bbv12I GWGCWC 2 cut(s) 174, 1187
BbvCI CCTCAGC 2 cut(s) 620, 1215
BbvI GCAGC 7 cut(s) 138, 1034, 1057, 1261, 1421, 1904, 2198
BccI CCATC 6 cut(s) 410, 1109, 1594, 1989, 2122, 2165
BcgI CGANNNNNNTGC 2 cut(s) 1388, 1422
BciT130I CCWGG 2 cut(s) 1111, 2168
BcnI CCSGG 2 cut(s) 52, 615
BcoDI GTCTC 3 cut(s) 1103, 1883, 2126
BcuI ACTAGT 1 cut(s) 2237
BfaI CTAG 8 cut(s) 252, 855, 927, 1017, 1230, 1464, 1655, 2238
BfmI CTRYAG 2 cut(s) 1158, 1266
BisI GCNGC 8 cut(s) 127, 611, 1048, 1071, 1275, 1410, 1918, 2187
BlsI GCNGC 8 cut(s) 128, 612, 1049, 1072, 1276, 1411, 1919, 2188
Bme1390I CCNGG 4 cut(s) 52, 615, 1111, 2168
Bme18I GGWCC 2 cut(s) 151, 160
BmeT110I CYCGRG 3 cut(s) 704, 806, 1724
BmgT120I GGNCC 2 cut(s) 151, 160
BmiI GGNNCC 3 cut(s) 153, 318, 2016
BmrFI CCNGG 4 cut(s) 52, 615, 1111, 2168
BmrI ACTGGG 2 cut(s) 83, 1089
BmsI GCATC 6 cut(s) 356, 1261, 1384, 1929, 1993, 2097
BmtI GCTAGC 1 cut(s) 1467
BmuI ACTGGG 2 cut(s) 83, 1089
BpiI GAAGAC 1 cut(s) 204
BpmI CTGGAG 1 cut(s) 1452
Bpu10I CCTNAGC 3 cut(s) 342, 620, 1215
BpuEI CTTGAG 2 cut(s) 158, 1376
BpuMI CCSGG 2 cut(s) 52, 615
BsaI GGTCTC 1 cut(s) 2126
BsaJI CCNNGG 9 cut(s) 357, 411, 522, 614, 666, 807, 1110, 2136, 2166
BsaWI WCCGGW 1 cut(s) 1699
BsaXI ACNNNNNCTCC 4 cut(s) 40, 70, 161, 191
Bsc4I CCNNNNNNNGG 7 cut(s) 416, 449, 527, 528, 1525, 1596, 2172
Bse118I RCCGGY 1 cut(s) 709
Bse1I ACTGG 8 cut(s) 89, 437, 1095, 1197, 1380, 1435, 1716, 2073
Bse3DI GCAATG 2 cut(s) 117, 1341
BseBI CCWGG 2 cut(s) 1111, 2168
BseDI CCNNGG 9 cut(s) 357, 411, 522, 614, 666, 807, 1110, 2136, 2166
BseGI GGATG 8 cut(s) 421, 598, 994, 1120, 1225, 1586, 2008, 2176
BseLI CCNNNNNNNGG 7 cut(s) 416, 449, 527, 528, 1525, 1596, 2172
BseMI GCAATG 2 cut(s) 117, 1341
BseMII CTCAG 6 cut(s) 356, 480, 611, 993, 1206, 2193
BseNI ACTGG 8 cut(s) 89, 437, 1095, 1197, 1380, 1435, 1716, 2073
BseSI GKGCMC 1 cut(s) 333
BseX3I CGGCCG 1 cut(s) 611
BseXI GCAGC 7 cut(s) 138, 1034, 1057, 1261, 1421, 1904, 2198
BseYI CCCAGC 1 cut(s) 527
BsgI GTGCAG 1 cut(s) 1956
Bsh1236I CGCG 1 cut(s) 610
Bsh1285I CGRYCG 2 cut(s) 184, 614
BshFI GGCC 6 cut(s) 436, 613, 776, 1773, 1802, 1840
BshNI GGYRCC 1 cut(s) 316
BsiEI CGRYCG 2 cut(s) 184, 614
BsiHKAI GWGCWC 2 cut(s) 174, 1187
BsiHKCI CYCGRG 3 cut(s) 704, 806, 1724
BsiSI CCGG 4 cut(s) 52, 614, 710, 1700
BslI CCNNNNNNNGG 7 cut(s) 416, 449, 527, 528, 1525, 1596, 2172
BsmAI GTCTC 3 cut(s) 1103, 1883, 2126
BsmI GAATGC 3 cut(s) 343, 959, 1336
BsnI GGCC 6 cut(s) 436, 613, 776, 1773, 1802, 1840
Bso31I GGTCTC 1 cut(s) 2126
BsoBI CYCGRG 3 cut(s) 704, 806, 1724
Bsp1286I GDGCHC 4 cut(s) 144, 174, 333, 1187
Bsp1407I TGTACA 1 cut(s) 1593
Bsp143I GATC 4 cut(s) 189, 1582, 2014, 2119
BspACI CCGC 2 cut(s) 610, 2144
BspANI GGCC 6 cut(s) 436, 613, 776, 1773, 1802, 1840
BspCNI CTCAG 6 cut(s) 355, 481, 612, 994, 1207, 2194
BspFNI CGCG 1 cut(s) 610
BspLI GGNNCC 3 cut(s) 153, 318, 2016
BspOI GCTAGC 1 cut(s) 1467
BspPI GGATC 4 cut(s) 1577, 2009, 2022, 2114
BspT107I GGYRCC 1 cut(s) 316
BspTNI GGTCTC 1 cut(s) 2126
BsrDI GCAATG 2 cut(s) 117, 1341
BsrFI RCCGGY 1 cut(s) 709
BsrGI TGTACA 1 cut(s) 1593
BsrI ACTGG 8 cut(s) 89, 437, 1095, 1197, 1380, 1435, 1716, 2073
BssAI RCCGGY 1 cut(s) 709
BssECI CCNNGG 9 cut(s) 357, 411, 522, 614, 666, 807, 1110, 2136, 2166
BssMI GATC 4 cut(s) 189, 1582, 2014, 2119
BssT1I CCWWGG 4 cut(s) 411, 522, 666, 2136
Bst2UI CCWGG 2 cut(s) 1111, 2168
Bst4CI ACNGT 4 cut(s) 8, 1299, 1520, 2011
Bst6I CTCTTC 1 cut(s) 1848
BstAUI TGTACA 1 cut(s) 1593
BstC8I GCNNGC 3 cut(s) 124, 1465, 1971
BstDEI CTNAG 7 cut(s) 342, 489, 620, 1002, 1215, 1546, 2202
BstENI CCTNNNNNAGG 1 cut(s) 1594
BstF5I GGATG 8 cut(s) 421, 598, 994, 1120, 1225, 1586, 2008, 2176
BstFNI CGCG 1 cut(s) 610
BstKTI GATC 4 cut(s) 192, 1585, 2017, 2122
BstMAI GTCTC 3 cut(s) 1103, 1883, 2126
BstMBI GATC 4 cut(s) 189, 1582, 2014, 2119
BstMCI CGRYCG 2 cut(s) 184, 614
BstMWI GCNNNNNNNGC 4 cut(s) 524, 616, 1177, 2192
BstNI CCWGG 2 cut(s) 1111, 2168
BstNSI RCATGY 1 cut(s) 2223
BstSCI CCNGG 4 cut(s) 50, 613, 1109, 2166
BstSFI CTRYAG 2 cut(s) 1158, 1266
BstSLI GKGCMC 1 cut(s) 333
BstUI CGCG 1 cut(s) 610
BstV1I GCAGC 7 cut(s) 138, 1034, 1057, 1261, 1421, 1904, 2198
BstV2I GAAGAC 1 cut(s) 204
BstX2I RGATCY 3 cut(s) 1582, 2014, 2119
BstXI CCANNNNNNTGG 1 cut(s) 226
BstYI RGATCY 3 cut(s) 1582, 2014, 2119
BstZI CGGCCG 1 cut(s) 611
BsuRI GGCC 6 cut(s) 436, 613, 776, 1773, 1802, 1840
BtgZI GCGATG 1 cut(s) 1917
BtsCI GGATG 8 cut(s) 421, 598, 994, 1120, 1225, 1586, 2008, 2176
BtsI GCAGTG 1 cut(s) 865
BtsIMutI CAGTG 5 cut(s) 444, 865, 1387, 1839, 2007
Cac8I GCNNGC 3 cut(s) 124, 1465, 1971
CaiI CAGNNNCTG 1 cut(s) 2201
Cfr10I RCCGGY 1 cut(s) 709
Cfr13I GGNCC 2 cut(s) 151, 160
CseI GACGC 2 cut(s) 893, 1311
Csp6I GTAC 1 cut(s) 1594
CviAII CATG 5 cut(s) 187, 1388, 1560, 1882, 2220
CviQI GTAC 1 cut(s) 1594
DdeI CTNAG 7 cut(s) 342, 489, 620, 1002, 1215, 1546, 2202
DpnI GATC 4 cut(s) 191, 1584, 2016, 2121
DpnII GATC 4 cut(s) 189, 1582, 2014, 2119
DraI TTTAAA 1 cut(s) 2032
DrdI GACNNNNNNGTC 1 cut(s) 1095
DseDI GACNNNNNNGTC 1 cut(s) 1095
EaeI YGGCCR 3 cut(s) 611, 1771, 1800
EagI CGGCCG 1 cut(s) 611
Eam1104I CTCTTC 1 cut(s) 1848
EarI CTCTTC 1 cut(s) 1848
Ecl136II GAGCTC 1 cut(s) 172
EclXI CGGCCG 1 cut(s) 611
Eco130I CCWWGG 4 cut(s) 411, 522, 666, 2136
Eco24I GRGCYC 2 cut(s) 144, 174
Eco31I GGTCTC 1 cut(s) 2126
Eco47I GGWCC 2 cut(s) 151, 160
Eco52I CGGCCG 1 cut(s) 611
Eco53kI GAGCTC 1 cut(s) 172
Eco57I CTGAAG 2 cut(s) 1083, 1434
Eco88I CYCGRG 3 cut(s) 704, 806, 1724
EcoICRI GAGCTC 1 cut(s) 172
EcoNI CCTNNNNNAGG 1 cut(s) 1594
EcoRII CCWGG 2 cut(s) 1109, 2166
EcoT14I CCWWGG 4 cut(s) 411, 522, 666, 2136
EcoT38I GRGCYC 2 cut(s) 144, 174
ErhI CCWWGG 4 cut(s) 411, 522, 666, 2136
FaeI CATG 5 cut(s) 190, 1391, 1563, 1885, 2223
FatI CATG 5 cut(s) 186, 1387, 1559, 1881, 2219
Fnu4HI GCNGC 8 cut(s) 127, 611, 1048, 1071, 1275, 1410, 1918, 2187
FokI GGATG 8 cut(s) 428, 605, 1001, 1127, 1232, 1573, 2015, 2183
FriOI GRGCYC 2 cut(s) 144, 174
Fsp4HI GCNGC 8 cut(s) 127, 611, 1048, 1071, 1275, 1410, 1918, 2187
FspBI CTAG 8 cut(s) 252, 855, 927, 1017, 1230, 1464, 1655, 2238
GluI GCNGC 8 cut(s) 127, 611, 1048, 1071, 1275, 1410, 1918, 2187
GsaI CCCAGC 1 cut(s) 531
GsuI CTGGAG 1 cut(s) 1452
HaeIII GGCC 6 cut(s) 436, 613, 776, 1773, 1802, 1840
HapII CCGG 4 cut(s) 52, 614, 710, 1700
HgaI GACGC 2 cut(s) 893, 1311
Hin1II CATG 5 cut(s) 190, 1391, 1563, 1885, 2223
HindIII AAGCTT 1 cut(s) 274
HinfI GANTC 8 cut(s) 55, 998, 1013, 1106, 1132, 1360, 1556, 1856
HpaII CCGG 4 cut(s) 52, 614, 710, 1700
HphI GGTGA 7 cut(s) 10, 206, 724, 794, 893, 1233, 2165
Hpy166II GTNNAC 4 cut(s) 1121, 1241, 1385, 2062
Hpy188I TCNGA 6 cut(s) 361, 490, 1003, 1063, 1986, 2043
Hpy188III TCNNGA 5 cut(s) 75, 1100, 1726, 1909, 1924
Hpy8I GTNNAC 4 cut(s) 1121, 1241, 1385, 2062
HpyAV CCTTC 5 cut(s) 75, 1843, 1955, 2028, 2098
HpyCH4III ACNGT 4 cut(s) 8, 1299, 1520, 2011
HpyCH4V TGCA 9 cut(s) 126, 518, 1050, 1073, 1334, 1409, 1920, 1973, 2078
HpyF10VI GCNNNNNNNGC 4 cut(s) 524, 616, 1177, 2192
HpyF3I CTNAG 7 cut(s) 342, 489, 620, 1002, 1215, 1546, 2202
Hsp92II CATG 5 cut(s) 190, 1391, 1563, 1885, 2223
Kzo9I GATC 4 cut(s) 189, 1582, 2014, 2119
LmnI GCTCC 3 cut(s) 134, 169, 670
Lsp1109I GCAGC 7 cut(s) 138, 1034, 1057, 1261, 1421, 1904, 2198
LweI GCATC 6 cut(s) 356, 1261, 1384, 1929, 1993, 2097
MaeI CTAG 8 cut(s) 252, 855, 927, 1017, 1230, 1464, 1655, 2238
MaeIII GTNAC 4 cut(s) 881, 1207, 1630, 1693
MalI GATC 4 cut(s) 191, 1584, 2016, 2121
MboI GATC 4 cut(s) 189, 1582, 2014, 2119
MflI RGATCY 3 cut(s) 1582, 2014, 2119
MhlI GDGCHC 4 cut(s) 144, 174, 333, 1187
MlsI TGGCCA 2 cut(s) 1773, 1802
MluCI AATT 9 cut(s) 264, 500, 634, 1259, 1418, 1541, 1611, 1751, 1929
MluNI TGGCCA 2 cut(s) 1773, 1802
MlyI GAGTC 3 cut(s) 49, 1565, 1865
MmeI TCCRAC 1 cut(s) 1281
Mox20I TGGCCA 2 cut(s) 1773, 1802
MroXI GAANNNNTTC 1 cut(s) 1719
MscI TGGCCA 2 cut(s) 1773, 1802
MslI CAYNNNNRTG 2 cut(s) 1190, 1392
Msp20I TGGCCA 2 cut(s) 1773, 1802
MspA1I CMGCKG 1 cut(s) 1412
MspI CCGG 4 cut(s) 52, 614, 710, 1700
MspR9I CCNGG 4 cut(s) 52, 615, 1111, 2168
Mva1269I GAATGC 3 cut(s) 343, 959, 1336
MvaI CCWGG 2 cut(s) 1111, 2168
MvnI CGCG 1 cut(s) 610
MwoI GCNNNNNNNGC 4 cut(s) 524, 616, 1177, 2192
NciI CCSGG 2 cut(s) 52, 615
NdeII GATC 4 cut(s) 189, 1582, 2014, 2119
NheI GCTAGC 1 cut(s) 1463
NlaIII CATG 5 cut(s) 190, 1391, 1563, 1885, 2223
NlaIV GGNNCC 3 cut(s) 153, 318, 2016
NmuCI GTSAC 2 cut(s) 881, 1630
NspI RCATGY 1 cut(s) 2223
OliI CACNNNNGTG 1 cut(s) 1190
PciI ACATGT 1 cut(s) 2219
PcsI WCGNNNNNNNCGW 1 cut(s) 1905
PctI GAATGC 3 cut(s) 343, 959, 1336
PdmI GAANNNNTTC 1 cut(s) 1719
PfeI GAWTC 5 cut(s) 998, 1013, 1106, 1132, 1360
PflFI GACNNNGTC 1 cut(s) 1095
PkrI GCNGC 8 cut(s) 128, 612, 1049, 1072, 1276, 1411, 1919, 2188
PleI GAGTC 3 cut(s) 49, 1564, 1864
PpsI GAGTC 3 cut(s) 49, 1564, 1864
PscI ACATGT 1 cut(s) 2219
PshBI ATTAAT 1 cut(s) 1644
PsiI TTATAA 1 cut(s) 1457
Psp124BI GAGCTC 1 cut(s) 174
Psp6I CCWGG 2 cut(s) 1109, 2166
PspFI CCCAGC 1 cut(s) 527
PspGI CCWGG 2 cut(s) 1109, 2166
PspN4I GGNNCC 3 cut(s) 153, 318, 2016
PspPI GGNCC 2 cut(s) 151, 160
PstNI CAGNNNCTG 1 cut(s) 2201
PsuI RGATCY 3 cut(s) 1582, 2014, 2119
PsyI GACNNNGTC 1 cut(s) 1095
PvuII CAGCTG 1 cut(s) 1412
RsaI GTAC 1 cut(s) 1595
RsaNI GTAC 1 cut(s) 1594
RseI CAYNNNNRTG 2 cut(s) 1190, 1392
SacI GAGCTC 1 cut(s) 174
SatI GCNGC 8 cut(s) 127, 611, 1048, 1071, 1275, 1410, 1918, 2187
Sau3AI GATC 4 cut(s) 189, 1582, 2014, 2119
Sau96I GGNCC 2 cut(s) 151, 160
SchI GAGTC 3 cut(s) 49, 1565, 1865
ScrFI CCNGG 4 cut(s) 52, 615, 1111, 2168
SduI GDGCHC 4 cut(s) 144, 174, 333, 1187
SfaNI GCATC 6 cut(s) 356, 1261, 1384, 1929, 1993, 2097
SfcI CTRYAG 2 cut(s) 1158, 1266
SinI GGWCC 2 cut(s) 151, 160
SmiMI CAYNNNNRTG 2 cut(s) 1190, 1392
SmlI CTYRAG 2 cut(s) 173, 1355
SmoI CTYRAG 2 cut(s) 173, 1355
SpeI ACTAGT 1 cut(s) 2237
Sse9I AATT 9 cut(s) 264, 500, 634, 1259, 1418, 1541, 1611, 1751, 1929
SsiI CCGC 2 cut(s) 610, 2144
SspMI CTAG 8 cut(s) 252, 855, 927, 1017, 1230, 1464, 1655, 2238
SstI GAGCTC 1 cut(s) 174
StyD4I CCNGG 4 cut(s) 50, 613, 1109, 2166
StyI CCWWGG 4 cut(s) 411, 522, 666, 2136
TaaI ACNGT 4 cut(s) 8, 1299, 1520, 2011
TaqI TCGA 4 cut(s) 969, 1101, 1959, 2049
TaqII GACCGA 1 cut(s) 170
TasI AATT 9 cut(s) 264, 500, 634, 1259, 1418, 1541, 1611, 1751, 1929
TatI WGTACW 1 cut(s) 1593
TauI GCSGC 1 cut(s) 613
TfiI GAWTC 5 cut(s) 998, 1013, 1106, 1132, 1360
TscAI CASTG 5 cut(s) 444, 865, 1387, 1839, 2014
TseFI GTSAC 2 cut(s) 881, 1630
TseI GCWGC 7 cut(s) 126, 1047, 1070, 1274, 1409, 1917, 2186
Tsp45I GTSAC 2 cut(s) 881, 1630
TspDTI ATGAA 5 cut(s) 106, 738, 1236, 1404, 1721
TspGWI ACGGA 1 cut(s) 2112
TspRI CASTG 5 cut(s) 444, 865, 1387, 1839, 2014
Tth111I GACNNNGTC 1 cut(s) 1095
VpaK11BI GGWCC 2 cut(s) 151, 160
VspI ATTAAT 1 cut(s) 1644
XagI CCTNNNNNAGG 1 cut(s) 1594
XapI RAATTY 4 cut(s) 634, 1259, 1541, 1751
XceI RCATGY 1 cut(s) 2223
XmnI GAANNNNTTC 1 cut(s) 1719
XspI CTAG 8 cut(s) 252, 855, 927, 1017, 1230, 1464, 1655, 2238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.