Prupe.5G122200_v2.0.a1

Calcineurin B-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
12139284 .. 12143357
4074 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G122200.1

Sequence Viewer

Length: 657 bp
ATGCGTCGTTTCCTGCACTGCTTTTGCTTGATGAGTTCCAAAGTTGATAGACATAGACTTGGGTATGAGGACCCTACTATTCTTGCTTCAGAAACTGCTTTTACAGTAAATGAAGTGGAGGCCTTGTATGATCTGTTTAAGAAACTAAGCAGTTCCATAATTAAAGACGGTCTTCTTCTACACAAGGAAGAATTCCAACTTGCACTATTTCAGAGCAGCAGTAAACAGAATCTTTTTGCGGATAGGGTATTTGACTTGTTTGACATCAAGCGTAATGGGGTTATTGAATTTGGAGAGTTTGTTCGGTCATTAAGTATTTTTCACCCAAATGCTTCCGAAGCAGAAAAAATATCATTTGCATTCAGATTGTATGATCTACGACAGACTGGCTACATTGAGCGTGATGAGGTGAAGGAGATGGTGTCAGCCCTATTGAGTGAATCAGATCTGGAACTTTCCGATGATGTTATTGAATCAATTGTAGATAAGACAATGGTGGAGGCAGATTTAAAAGGGGACGGGAAAATCGATCAAGAAGAGTGGAAAGAATTTGTAGCAAAGCATCCATCTCTAATAAAGAATATGACTCTTCCATATCTAAAGGACATAACCATACAATTTCCCAGCTTTGTGCTCAACACTGAAGTTCGAGATTAG

Protein Analysis

219

Amino Acids

25.21

Weight (kDa)

4.94

Isoelectric Point (pI)

41.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 239
AcsI RAATTY 3 cut(s) 191, 287, 548
AcuI CTGAAG 1 cut(s) 72
AgsI TTSAA 2 cut(s) 287, 473
AloI GAACNNNNNNTCC 2 cut(s) 285, 317
AluBI AGCT 1 cut(s) 627
AluI AGCT 1 cut(s) 627
Alw21I GWGCWC 1 cut(s) 636
AlwNI CAGNNNCTG 1 cut(s) 95
AoxI GGCC 1 cut(s) 120
ApeKI GCWGC 1 cut(s) 216
ApoI RAATTY 3 cut(s) 191, 287, 548
AspS9I GGNCC 1 cut(s) 70
AsuHPI GGTGA 2 cut(s) 314, 421
AvaII GGWCC 1 cut(s) 70
BbsI GAAGAC 1 cut(s) 164
Bbv12I GWGCWC 1 cut(s) 636
BbvI GCAGC 1 cut(s) 228
BccI CCATC 2 cut(s) 412, 574
BglII AGATCT 1 cut(s) 445
BisI GCNGC 1 cut(s) 217
BlsI GCNGC 1 cut(s) 218
Bme18I GGWCC 1 cut(s) 70
BmgT120I GGNCC 1 cut(s) 70
BmiI GGNNCC 1 cut(s) 72
BmsI GCATC 1 cut(s) 571
BpiI GAAGAC 1 cut(s) 164
Bsa29I ATCGAT 1 cut(s) 528
BsaXI ACNNNNNCTCC 6 cut(s) 110, 140, 285, 315, 407, 437
Bse1I ACTGG 1 cut(s) 391
BseCI ATCGAT 1 cut(s) 528
BseGI GGATG 1 cut(s) 562
BseNI ACTGG 1 cut(s) 391
BseXI GCAGC 1 cut(s) 228
BseYI CCCAGC 1 cut(s) 623
BshFI GGCC 1 cut(s) 122
BshVI ATCGAT 1 cut(s) 528
BsiHKAI GWGCWC 1 cut(s) 636
BslFI GGGAC 1 cut(s) 530
BsmFI GGGAC 1 cut(s) 530
BsmI GAATGC 1 cut(s) 359
BsnI GGCC 1 cut(s) 122
Bsp1286I GDGCHC 1 cut(s) 636
Bsp143I GATC 4 cut(s) 130, 373, 445, 529
BspACI CCGC 1 cut(s) 239
BspANI GGCC 1 cut(s) 122
BspDI ATCGAT 1 cut(s) 528
BspLI GGNNCC 1 cut(s) 72
BsrI ACTGG 1 cut(s) 391
BssMI GATC 4 cut(s) 130, 373, 445, 529
Bst4CI ACNGT 2 cut(s) 106, 170
Bst6I CTCTTC 2 cut(s) 531, 594
BstDEI CTNAG 1 cut(s) 146
BstF5I GGATG 1 cut(s) 562
BstKTI GATC 4 cut(s) 133, 376, 448, 532
BstMBI GATC 4 cut(s) 130, 373, 445, 529
BstMWI GCNNNNNNNGC 1 cut(s) 338
BstV1I GCAGC 1 cut(s) 228
BstV2I GAAGAC 1 cut(s) 164
BstX2I RGATCY 1 cut(s) 445
BstYI RGATCY 1 cut(s) 445
Bsu15I ATCGAT 1 cut(s) 528
BsuRI GGCC 1 cut(s) 122
BsuTUI ATCGAT 1 cut(s) 528
BtsCI GGATG 1 cut(s) 562
BtsI GCAGTG 1 cut(s) 16
BtsIMutI CAGTG 2 cut(s) 16, 639
CaiI CAGNNNCTG 1 cut(s) 95
Cfr13I GGNCC 1 cut(s) 70
ClaI ATCGAT 1 cut(s) 528
CspCI CAANNNNNGTGG 2 cut(s) 521, 556
CviJI RGCY 4 cut(s) 122, 390, 428, 627
CviKI_1 RGCY 4 cut(s) 122, 390, 428, 627
DdeI CTNAG 1 cut(s) 146
DpnI GATC 4 cut(s) 132, 375, 447, 531
DpnII GATC 4 cut(s) 130, 373, 445, 529
DraI TTTAAA 1 cut(s) 510
Eam1104I CTCTTC 2 cut(s) 531, 594
EarI CTCTTC 2 cut(s) 531, 594
Eco147I AGGCCT 1 cut(s) 122
Eco47I GGWCC 1 cut(s) 70
Eco57I CTGAAG 1 cut(s) 72
EcoO109I RGGNCCY 1 cut(s) 70
EcoRI GAATTC 1 cut(s) 191
FaiI YATR 9 cut(s) 54, 66, 129, 158, 372, 584, 595, 608, 614
FalI AAGNNNNNCTT 2 cut(s) 156, 188
FaqI GGGAC 1 cut(s) 530
Fnu4HI GCNGC 1 cut(s) 217
FokI GGATG 1 cut(s) 549
Fsp4HI GCNGC 1 cut(s) 217
GluI GCNGC 1 cut(s) 217
GsaI CCCAGC 1 cut(s) 627
HaeIII GGCC 1 cut(s) 122
HinfI GANTC 4 cut(s) 229, 440, 473, 586
HphI GGTGA 2 cut(s) 314, 421
Hpy166II GTNNAC 1 cut(s) 224
Hpy188I TCNGA 6 cut(s) 91, 213, 337, 365, 445, 460
Hpy188III TCNNGA 3 cut(s) 449, 533, 650
Hpy8I GTNNAC 1 cut(s) 224
Hpy99I CGWCG 1 cut(s) 9
HpyAV CCTTC 1 cut(s) 406
HpyCH4III ACNGT 2 cut(s) 106, 170
HpyCH4V TGCA 3 cut(s) 16, 203, 359
HpyF10VI GCNNNNNNNGC 1 cut(s) 338
HpyF3I CTNAG 1 cut(s) 146
Kzo9I GATC 4 cut(s) 130, 373, 445, 529
LpnPI CCDG 4 cut(s) 26, 372, 434, 637
Lsp1109I GCAGC 1 cut(s) 228
LweI GCATC 1 cut(s) 571
MalI GATC 4 cut(s) 132, 375, 447, 531
MboI GATC 4 cut(s) 130, 373, 445, 529
MboII GAAGA 5 cut(s) 164, 167, 200, 548, 581
MfeI CAATTG 1 cut(s) 477
MflI RGATCY 1 cut(s) 445
MhlI GDGCHC 1 cut(s) 636
MluCI AATT 6 cut(s) 159, 191, 287, 477, 548, 617
MlyI GAGTC 1 cut(s) 580
MmeI TCCRAC 1 cut(s) 220
MnlI CCTC 4 cut(s) 61, 112, 400, 493
MseI TTAA 4 cut(s) 138, 162, 311, 509
MslI CAYNNNNRTG 1 cut(s) 327
MunI CAATTG 1 cut(s) 477
Mva1269I GAATGC 1 cut(s) 359
MwoI GCNNNNNNNGC 1 cut(s) 338
NdeII GATC 4 cut(s) 130, 373, 445, 529
NlaIV GGNNCC 1 cut(s) 72
PceI AGGCCT 1 cut(s) 122
PcsI WCGNNNNNNNCGW 1 cut(s) 525
PctI GAATGC 1 cut(s) 359
PfeI GAWTC 3 cut(s) 229, 440, 473
PkrI GCNGC 1 cut(s) 218
PleI GAGTC 1 cut(s) 580
PpsI GAGTC 1 cut(s) 580
PpuMI RGGWCCY 1 cut(s) 70
Psp5II RGGWCCY 1 cut(s) 70
PspFI CCCAGC 1 cut(s) 623
PspN4I GGNNCC 1 cut(s) 72
PspPI GGNCC 1 cut(s) 70
PspPPI RGGWCCY 1 cut(s) 70
PstNI CAGNNNCTG 1 cut(s) 95
PsuI RGATCY 1 cut(s) 445
RseI CAYNNNNRTG 1 cut(s) 327
SaqAI TTAA 4 cut(s) 138, 162, 311, 509
SatI GCNGC 1 cut(s) 217
Sau3AI GATC 4 cut(s) 130, 373, 445, 529
Sau96I GGNCC 1 cut(s) 70
SchI GAGTC 1 cut(s) 580
SduI GDGCHC 1 cut(s) 636
SetI ASST 2 cut(s) 411, 629
SfaNI GCATC 1 cut(s) 571
SinI GGWCC 1 cut(s) 70
SmiMI CAYNNNNRTG 1 cut(s) 327
Sse9I AATT 6 cut(s) 159, 191, 287, 477, 548, 617
SseBI AGGCCT 1 cut(s) 122
SsiI CCGC 1 cut(s) 239
StuI AGGCCT 1 cut(s) 122
TaaI ACNGT 2 cut(s) 106, 170
TaqI TCGA 2 cut(s) 528, 649
TaqII GACCGA 1 cut(s) 294
TasI AATT 6 cut(s) 159, 191, 287, 477, 548, 617
TfiI GAWTC 3 cut(s) 229, 440, 473
Tru1I TTAA 4 cut(s) 138, 162, 311, 509
Tru9I TTAA 4 cut(s) 138, 162, 311, 509
TscAI CASTG 2 cut(s) 23, 646
TseI GCWGC 1 cut(s) 216
TspDTI ATGAA 1 cut(s) 126
TspRI CASTG 2 cut(s) 23, 646
VpaK11BI GGWCC 1 cut(s) 70
XapI RAATTY 3 cut(s) 191, 287, 548
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.