Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0007008

Physical Location & Seq

Genomic Coordinates Forward (+)

1183421 .. 1186116

Gene Structure 2696 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0015000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGTTCCTCACAACTCTCCCATCCACCAAAACCCCAATCACCCCCAAAACCCTAACCATCCCTCTCACCTTCTTCTTCACACACTCCACCTCACCCTCTCACCACGAACAACCCCAAAACCAGCTCGACCAAATAATAAGCATAGACAACACACCACACTGGACCAAAACCATCCACGACCTCTGCACCCGCCACCGCAATGTCGACCAAGCCCTCCACCTCCTCGACCACCTCCGCCTCCGTGGCTACCGCCCCAACCCGCTCAACCTCTGCAGCATCATCCACGCCCTCTGCGACTCCAACCGCTTCGAAGAAGCCCACCACCGCTTCGCCCACTCCATCGACTCAGACTGCGTCCCTGACCAGCGCACCTGCAACGTCATCATCGCTCGGCTACTCGATTCGGAAACCCCGCACAGCACCTTGGGTGTTCTCCGCGTCTTGGGTCTACTGAAGCCTGATTTTGTTGCCTCTTTGGTTAATTACAACCGTCTGATGGATCAGCTCTGCTCGCTCCGGCGGCCCAGTGAGGCTCACAGAGTGTTGTTTGACATGCTTATTAGAGGGCATTGCCCCAACGCGGTTTCTTACACTACATTGATTAACGGGTACTGCGGCGTTGGCGAGTTGGGTAATGCACACAAGGTGTTTGATGAAATGTGTGAGAGGGGTGTAGCGCCTAATTCGATGACTTATAGTGTGTTGATTCGTGGCGTTCTTCGGAAGCGGGATATTGGGGGTGCTATGGAATTGATGGGAAGATTGTGGGACACAATGAAGGGTGAAGATGACACACTTGTGAAAAATGCGGCTTTCTCGAATTTGATTGATTCTATGTGTAGAGAAGGGTATTTTCAAGAGGTTTTCGGTATTGCAGAATACAGGCCACAGGGGGAGAGTGTGAATGAGGAGTTTGCTTATGGACAGATGATAGATTCGCTTTGTAAAGCCGGAAGGCATCATGGGGCGTCGAGAATTGTGTACATCATGAGGCATAGAGGGTTTGTTCCACGCATAACGTCGTATAATTGTATTATTCATGGACTGAGCAAGGAGGGGGAGGGAGGTTGTATGAGAGCCTATCAGTTGTTGGAGGAAGGGATTGAGTTTGGTTACTTGCCGTCTGAGTACACTTACAAGGTTCTAGTGGAAGGTCTTTGCCAAGAATCCGACGTTGACAAGGCGCGGCAGGTTCTTCAATATATGTTAAAGAAGGAAAGAGTGGACAAAACCAGGATGTATAATATATATTTGAGGGCTCTATGTCTTGTTAATAACACGACTGAGCTTTTGAATGTGCTTGTTTCGATGCTCCAGACCGAGTGTCAGCCTGATGTGATCACCCTAAACATAGTTGTCAACGGGTTCTGCAAGATGGGGAGAGTGGAAGAAGCTTTAAAGGTACTGGATGATATGATGACTGGAAAATTTTGTGTGCCGAATGTAGTGACCTTCACAACTATCATTAATGGTTTGTTAAATGTTGGTAAAACGCAAGAAGCTCTTGGTATGTTGCATGATGTAATGCCTCAGAAAGGTTTTCCCCCTAATGTTGTGACATATAATGCTGTTCTTCGTGGTTTGTTTAAACTTAATCAAGGAAGGGAAGCAATGGAGATTTTCAATGGCATGGTAACTGAGGGTGTGGCTGCTGATAGTACCACTTACACAATTATAATTGATGGGTTATGTGAGTCTGATCAGCTAGAAGAGGCTAAGAGGTTCTGGGATGAGGTTATTTGGCCCTCACAGATCCATGACAATTTTGTATATGCAGCCATCATCAAAGGGATTTGCCATTCAGGAAATTTTGATGAGGCATGTCATTTCCTTTACGAACTTGTAGACTCTGGGGTCTCTCCGAATATATTCAGTTACAACATTGTGATCGACACTGCTTACAAACTAGGTCTGAAGAAAGAGGCATATGAAGTTGTAAGAGAGATGAGAAGAAATGGGCTGGCTCCAGATTCTGTAACTTGGAGGATCCTTGACAAGTTACACGGCAACTCAAGAAAACAATATGGGGATGATGAGGCTTCAACTTTGCAATTCGGAAGTGGCCGCATGGATAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0016020 GO:0019722 GO:0019932 GO:0023052 GO:0035556 GO:0043167 GO:0043169 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007

KEGG Pathways

Metabolic & Signaling

ko04010 ko04020 ko04022 ko04114 ko04218 ko04310 ko04360 ko04370 ko04380 ko04650 ko04658 ko04659 ko04660 ko04662 ko04720 ko04724 ko04921 ko04922 ko04924 ko05010 ko05014 ko05031 ko05152 ko05166 ko05167 map04010 map04020 map04022 map04114 map04218 map04310 map04360 map04370 map04380 map04650 map04658 map04659 map04660 map04662 map04720 map04724 map04921 map04922 map04924 map05010 map05014 map05031 map05152 map05166 map05167

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_6 EF-hand_7 EF-hand_8

Protein Analysis

692

Amino Acids

78.3

Weight (kDa)

6.1

Isoelectric Point (pI)

31.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	159 - 205	7.2e-11	PPR repeat family
PPR_3	PF13812	181 - 236	1.2e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	188 - 220	2.2e-11	PPR repeat
PPR_2	PF13041	192 - 239	2.4e-17	PPR repeat family
PPR	PF01535	195 - 225	2e-07	PPR repeat
PPR_2	PF13041	337 - 388	5.6e-07	PPR repeat family
PPR_1	PF12854	371 - 402	1.3e-06	PPR repeat
PPR_2	PF13041	413 - 458	3.2e-07	PPR repeat family
PPR_1	PF12854	441 - 472	6.5e-13	PPR repeat
PPR_2	PF13041	444 - 473	3.8e-07	PPR repeat family
PPR	PF01535	447 - 473	3.7e-06	PPR repeat
PPR_3	PF13812	479 - 525	5.8e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	480 - 530	5.8e-13	PPR repeat family
PPR_2	PF13041	516 - 564	2e-16	PPR repeat family
PPR_1	PF12854	548 - 578	2.2e-06	PPR repeat
PPR_2	PF13041	587 - 632	5.2e-09	PPR repeat family
PPR_2	PF13041	622 - 664	1.3e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007008)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64480 AT1G64480 AT1G64480 AT1G64480
fragaria_vesca	FvH4_5g04840 FvH4_5g04840 FvH4_5g04840 FvH4_5g04840
malus_domestica	MD06G1109200.v1.1
prunus_persica	Prupe.5G122200_v2.0.a1 Prupe.5G122200_v2.0.a1 Prupe.5G122200_v2.0.a1 Prupe.5G122200_v2.0.a1 Prupe.5G122200_v2.0.a1
pyrus_communis	pycom06g10250
rosa_chinensis	RchiOBHm_Chr7g0194291
rosa_multiflora	Rmu_sc0000901.1_g000010
rosa_roxburghii	Rroxscaffold_3G00261460
rosa_rugosa	Rorug07G0014900.1 Rorug07G0015000 Rorug07G0015100 Rorug07G0015200
rosa_samantha	Rh7CG146200 Rh7DG143700
rosa_wichuraiana	Rw7G012160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1676
AarI	CACCTGC	1 cut(s)	380
AasI	GACNNNNNNGTC	1 cut(s)	1853
Acc36I	ACCTGC	2 cut(s)	380, 1180
AccBSI	CCGCTC	1 cut(s)	262
AccI	GTMKAC	3 cut(s)	204, 448, 1845
AccII	CGCG	3 cut(s)	438, 581, 1186
AclWI	GGATC	4 cut(s)	507, 1747, 1981, 1994
AcoI	YGGCCR	1 cut(s)	2062
AcsI	RAATTY	3 cut(s)	820, 1427, 1807
AcuI	CTGAAG	2 cut(s)	473, 1934
AcyI	GRCGYC	1 cut(s)	968
AdeI	CACNNNGTG	2 cut(s)	541, 646
AfaI	GTAC	5 cut(s)	611, 983, 1130, 1404, 1660
AfiI	CCNNNNNNNGG	4 cut(s)	442, 496, 580, 1535
AgsI	TTSAA	5 cut(s)	857, 1199, 1294, 1624, 2043
AhdI	GACNNNNNGTC	1 cut(s)	1323
AjnI	CCWGG	1 cut(s)	1232
AleI	CACNNNNGTG	1 cut(s)	797
AluBI	AGCT	6 cut(s)	124, 505, 1288, 1394, 1502, 1705
AluI	AGCT	6 cut(s)	124, 505, 1288, 1394, 1502, 1705
Alw26I	GTCTC	1 cut(s)	1861
AlwI	GGATC	4 cut(s)	507, 1747, 1981, 1994
AlwNI	CAGNNNCTG	1 cut(s)	1973
AoxI	GGCC	4 cut(s)	521, 884, 1742, 2062
ApeKI	GCWGC	3 cut(s)	273, 1649, 1775
ApoI	RAATTY	3 cut(s)	820, 1427, 1807
ArsI	GACNNNNNNTTYG	2 cut(s)	1273, 1305
AseI	ATTAAT	1 cut(s)	1467
Asp700I	GAANNNNTTC	1 cut(s)	1868
AspLEI	GCGC	3 cut(s)	369, 679, 1186
AspS9I	GGNCC	3 cut(s)	162, 522, 1743
AsuHPI	GGTGA	6 cut(s)	31, 58, 84, 92, 794, 1333
AsuII	TTCGAA	1 cut(s)	309
AvaII	GGWCC	1 cut(s)	162
BamHI	GGATCC	1 cut(s)	1986
BanII	GRGCYC	1 cut(s)	1261
BbvI	GCAGC	3 cut(s)	285, 1636, 1787
BccI	CCATC	9 cut(s)	28, 65, 179, 347, 490, 748, 1369, 1676, 1787
BceAI	ACGGC	2 cut(s)	1105, 2020
BciT130I	CCWGG	1 cut(s)	1234
BclI	TGATCA	2 cut(s)	1338, 1699
BcoDI	GTCTC	1 cut(s)	1861
BfaI	CTAG	3 cut(s)	1145, 1706, 1907
BfmI	CTRYAG	1 cut(s)	271
BfoI	RGCGCY	1 cut(s)	680
BfuAI	ACCTGC	2 cut(s)	380, 1180
BglI	GCCNNNNNGGC	1 cut(s)	243
BisI	GCNGC	8 cut(s)	274, 521, 616, 810, 1187, 1650, 1776, 2065
BlsI	GCNGC	8 cut(s)	275, 522, 617, 811, 1188, 1651, 1777, 2066
Bme1390I	CCNGG	1 cut(s)	1234
Bme18I	GGWCC	1 cut(s)	162
BmeRI	GACNNNNNGTC	1 cut(s)	1323
BmgT120I	GGNCC	3 cut(s)	162, 522, 1743
BmiI	GGNNCC	2 cut(s)	1965, 1988
BmrFI	CCNGG	1 cut(s)	1234
BmrI	ACTGGG	1 cut(s)	519
BmsI	GCATC	3 cut(s)	285, 967, 1299
BmuI	ACTGGG	1 cut(s)	519
BpmI	CTGGAG	2 cut(s)	1298, 1950
Bpu14I	TTCGAA	1 cut(s)	309
BpuEI	CTTGAG	1 cut(s)	1996
BsaHI	GRCGYC	1 cut(s)	968
BsaI	GGTCTC	1 cut(s)	1861
BsaJI	CCNNGG	2 cut(s)	241, 423
Bsc4I	CCNNNNNNNGG	4 cut(s)	442, 496, 580, 1535
Bse1I	ACTGG	4 cut(s)	164, 525, 1410, 1426
Bse3DI	GCAATG	3 cut(s)	205, 568, 1617
BseBI	CCWGG	1 cut(s)	1234
BseDI	CCNNGG	2 cut(s)	241, 423
BseGI	GGATG	8 cut(s)	20, 57, 171, 279, 1242, 1414, 1735, 2035
BseLI	CCNNNNNNNGG	4 cut(s)	442, 496, 580, 1535
BseMI	GCAATG	3 cut(s)	205, 568, 1617
BseMII	CTCAG	6 cut(s)	360, 1037, 1116, 1275, 1544, 1629
BseNI	ACTGG	4 cut(s)	164, 525, 1410, 1426
BseRI	GAGGAG	2 cut(s)	212, 923
BseXI	GCAGC	3 cut(s)	285, 1636, 1787
BsgI	GTGCAG	1 cut(s)	169
Bsh1236I	CGCG	3 cut(s)	438, 581, 1186
BshFI	GGCC	4 cut(s)	523, 886, 1744, 2064
BsiSI	CCGG	2 cut(s)	517, 951
BslFI	GGGAC	2 cut(s)	341, 782
BslI	CCNNNNNNNGG	4 cut(s)	442, 496, 580, 1535
BsmAI	GTCTC	1 cut(s)	1861
BsmFI	GGGAC	2 cut(s)	341, 782
BsnI	GGCC	4 cut(s)	523, 886, 1744, 2064
Bso31I	GGTCTC	1 cut(s)	1861
Bsp119I	TTCGAA	1 cut(s)	309
Bsp1286I	GDGCHC	1 cut(s)	1261
Bsp1407I	TGTACA	1 cut(s)	981
Bsp143I	GATC	6 cut(s)	499, 1338, 1699, 1752, 1887, 1986
BspANI	GGCC	4 cut(s)	523, 886, 1744, 2064
BspCNI	CTCAG	6 cut(s)	359, 1038, 1117, 1276, 1543, 1630
BspFNI	CGCG	3 cut(s)	438, 581, 1186
BspHI	TCATGA	1 cut(s)	987
BspLI	GGNNCC	2 cut(s)	1965, 1988
BspMAI	CTGCAG	1 cut(s)	275
BspMI	ACCTGC	2 cut(s)	380, 1180
BspPI	GGATC	4 cut(s)	507, 1747, 1981, 1994
BspT104I	TTCGAA	1 cut(s)	309
BspTNI	GGTCTC	1 cut(s)	1861
BsrBI	CCGCTC	1 cut(s)	262
BsrDI	GCAATG	3 cut(s)	205, 568, 1617
BsrGI	TGTACA	1 cut(s)	981
BsrI	ACTGG	4 cut(s)	164, 525, 1410, 1426
BssECI	CCNNGG	2 cut(s)	241, 423
BssMI	GATC	6 cut(s)	499, 1338, 1699, 1752, 1887, 1986
BssNI	GRCGYC	1 cut(s)	968
BssT1I	CCWWGG	1 cut(s)	423
Bst2UI	CCWGG	1 cut(s)	1234
Bst4CI	ACNGT	1 cut(s)	491
Bst6I	CTCTTC	1 cut(s)	1704
BstACI	GRCGYC	1 cut(s)	968
BstAUI	TGTACA	1 cut(s)	981
BstBI	TTCGAA	1 cut(s)	309
BstC8I	GCNNGC	2 cut(s)	512, 1962
BstDEI	CTNAG	7 cut(s)	346, 1046, 1125, 1284, 1530, 1638, 1716
BstDSI	CCRYGG	1 cut(s)	241
BstENI	CCTNNNNNAGG	1 cut(s)	1533
BstF5I	GGATG	8 cut(s)	20, 57, 171, 279, 1242, 1414, 1735, 2035
BstFNI	CGCG	3 cut(s)	438, 581, 1186
BstH2I	RGCGCY	1 cut(s)	680
BstHHI	GCGC	3 cut(s)	369, 679, 1186
BstKTI	GATC	6 cut(s)	502, 1341, 1702, 1755, 1890, 1989
BstMAI	GTCTC	1 cut(s)	1861
BstMBI	GATC	6 cut(s)	499, 1338, 1699, 1752, 1887, 1986
BstMWI	GCNNNNNNNGC	4 cut(s)	243, 511, 520, 621
BstNI	CCWGG	1 cut(s)	1234
BstNSI	RCATGY	2 cut(s)	556, 1824
BstSCI	CCNGG	1 cut(s)	1232
BstSFI	CTRYAG	1 cut(s)	271
BstUI	CGCG	3 cut(s)	438, 581, 1186
BstV1I	GCAGC	3 cut(s)	285, 1636, 1787
BstX2I	RGATCY	2 cut(s)	1752, 1986
BstYI	RGATCY	2 cut(s)	1752, 1986
BsuRI	GGCC	4 cut(s)	523, 886, 1744, 2064
BtgI	CCRYGG	1 cut(s)	241
BtgZI	GCGATG	1 cut(s)	370
BtsCI	GGATG	8 cut(s)	20, 57, 171, 279, 1242, 1414, 1735, 2035
BtsI	GCAGTG	1 cut(s)	1893
BtsIMutI	CAGTG	3 cut(s)	157, 532, 1893
BveI	ACCTGC	2 cut(s)	380, 1180
Cac8I	GCNNGC	2 cut(s)	512, 1962
CaiI	CAGNNNCTG	1 cut(s)	1973
CciI	TCATGA	1 cut(s)	987
CfoI	GCGC	3 cut(s)	369, 679, 1186
Cfr13I	GGNCC	3 cut(s)	162, 522, 1743
CseI	GACGC	3 cut(s)	343, 427, 957
Csp6I	GTAC	5 cut(s)	610, 982, 1129, 1403, 1659
CviAII	CATG	9 cut(s)	553, 962, 988, 1040, 1517, 1630, 1757, 1821, 2068
CviQI	GTAC	5 cut(s)	610, 982, 1129, 1403, 1659
DdeI	CTNAG	7 cut(s)	346, 1046, 1125, 1284, 1530, 1638, 1716
DpnI	GATC	6 cut(s)	501, 1340, 1701, 1754, 1889, 1988
DpnII	GATC	6 cut(s)	499, 1338, 1699, 1752, 1887, 1986
DraI	TTTAAA	2 cut(s)	1398, 1588
DraIII	CACNNNGTG	2 cut(s)	541, 646
DrdI	GACNNNNNNGTC	1 cut(s)	1853
DriI	GACNNNNNGTC	1 cut(s)	1323
DseDI	GACNNNNNNGTC	1 cut(s)	1853
EaeI	YGGCCR	1 cut(s)	2062
Eam1104I	CTCTTC	1 cut(s)	1704
Eam1105I	GACNNNNNGTC	1 cut(s)	1323
EarI	CTCTTC	1 cut(s)	1704
EciI	GGCGGA	1 cut(s)	224
Eco130I	CCWWGG	1 cut(s)	423
Eco24I	GRGCYC	1 cut(s)	1261
Eco31I	GGTCTC	1 cut(s)	1861
Eco47I	GGWCC	1 cut(s)	162
Eco57I	CTGAAG	2 cut(s)	473, 1934
EcoNI	CCTNNNNNAGG	1 cut(s)	1533
EcoRII	CCWGG	1 cut(s)	1232
EcoT14I	CCWWGG	1 cut(s)	423
EcoT38I	GRGCYC	1 cut(s)	1261
ErhI	CCWWGG	1 cut(s)	423
FaeI	CATG	9 cut(s)	556, 965, 991, 1043, 1520, 1633, 1760, 1824, 2071
FalI	AAGNNNNNCTT	2 cut(s)	1488, 1520
FaqI	GGGAC	2 cut(s)	341, 782
FatI	CATG	9 cut(s)	552, 961, 987, 1039, 1516, 1629, 1756, 1820, 2067
FauI	CCCGC	4 cut(s)	197, 267, 420, 720
FauNDI	CATATG	1 cut(s)	1927
FbaI	TGATCA	2 cut(s)	1338, 1699
FblI	GTMKAC	3 cut(s)	204, 448, 1845
Fnu4HI	GCNGC	8 cut(s)	274, 521, 616, 810, 1187, 1650, 1776, 2065
FokI	GGATG	8 cut(s)	7, 44, 158, 266, 1249, 1421, 1742, 2042
FriOI	GRGCYC	1 cut(s)	1261
Fsp4HI	GCNGC	8 cut(s)	274, 521, 616, 810, 1187, 1650, 1776, 2065
FspBI	CTAG	3 cut(s)	1145, 1706, 1907
GlaI	GCGC	3 cut(s)	368, 678, 1185
GluI	GCNGC	8 cut(s)	274, 521, 616, 810, 1187, 1650, 1776, 2065
GsuI	CTGGAG	2 cut(s)	1298, 1950
HaeII	RGCGCY	1 cut(s)	680
HaeIII	GGCC	4 cut(s)	523, 886, 1744, 2064
HapII	CCGG	2 cut(s)	517, 951
HgaI	GACGC	3 cut(s)	343, 427, 957
HhaI	GCGC	3 cut(s)	369, 679, 1186
Hin1I	GRCGYC	1 cut(s)	968
Hin1II	CATG	9 cut(s)	556, 965, 991, 1043, 1520, 1633, 1760, 1824, 2071
Hin6I	GCGC	3 cut(s)	367, 677, 1184
HinP1I	GCGC	3 cut(s)	367, 677, 1184
HincII	GTYRAC	3 cut(s)	205, 1177, 1360
HindII	GTYRAC	3 cut(s)	205, 1177, 1360
HindIII	AAGCTT	1 cut(s)	1392
HpaII	CCGG	2 cut(s)	517, 951
HphI	GGTGA	6 cut(s)	31, 58, 84, 92, 794, 1333
Hpy166II	GTNNAC	8 cut(s)	205, 449, 982, 1131, 1177, 1225, 1360, 1846
Hpy188III	TCNNGA	8 cut(s)	817, 857, 972, 988, 1315, 1803, 1967, 2013
Hpy8I	GTNNAC	8 cut(s)	205, 449, 982, 1131, 1177, 1225, 1360, 1846
Hpy99I	CGWCG	3 cut(s)	973, 1024, 1175
HpyAV	CCTTC	9 cut(s)	79, 772, 839, 948, 1091, 1145, 1207, 1462, 1596
HpyCH4III	ACNGT	1 cut(s)	491
HpyCH4IV	ACGT	3 cut(s)	378, 1019, 1173
HpyCH4V	TGCA	9 cut(s)	186, 273, 375, 638, 875, 1371, 1516, 1775, 2050
HpyF10VI	GCNNNNNNNGC	4 cut(s)	243, 511, 520, 621
HpyF3I	CTNAG	7 cut(s)	346, 1046, 1125, 1284, 1530, 1638, 1716
HpySE526I	ACGT	3 cut(s)	378, 1019, 1173
Hsp92I	GRCGYC	1 cut(s)	968
Hsp92II	CATG	9 cut(s)	556, 965, 991, 1043, 1520, 1633, 1760, 1824, 2071
HspAI	GCGC	3 cut(s)	367, 677, 1184
Ksp22I	TGATCA	2 cut(s)	1338, 1699
Kzo9I	GATC	6 cut(s)	499, 1338, 1699, 1752, 1887, 1986
LmnI	GCTCC	3 cut(s)	519, 1317, 1969
Lsp1109I	GCAGC	3 cut(s)	285, 1636, 1787
LweI	GCATC	3 cut(s)	285, 967, 1299
MaeI	CTAG	3 cut(s)	1145, 1706, 1907
MaeII	ACGT	3 cut(s)	378, 1019, 1173
MaeIII	GTNAC	7 cut(s)	1112, 1447, 1555, 1633, 1874, 1975, 1998
MalI	GATC	6 cut(s)	501, 1340, 1701, 1754, 1889, 1988
MbiI	CCGCTC	1 cut(s)	262
MboI	GATC	6 cut(s)	499, 1338, 1699, 1752, 1887, 1986
MflI	RGATCY	2 cut(s)	1752, 1986
MhlI	GDGCHC	1 cut(s)	1261
MlyI	GAGTC	4 cut(s)	290, 338, 1703, 1841
MmeI	TCCRAC	3 cut(s)	324, 1071, 1194
MroXI	GAANNNNTTC	1 cut(s)	1868
MseI	TTAA	9 cut(s)	480, 603, 1208, 1272, 1397, 1467, 1478, 1587, 1593
MslI	CAYNNNNRTG	2 cut(s)	198, 797
MspI	CCGG	2 cut(s)	517, 951
MspR9I	CCNGG	1 cut(s)	1234
MssI	GTTTAAAC	1 cut(s)	1588
MvaI	CCWGG	1 cut(s)	1234
MvnI	CGCG	3 cut(s)	438, 581, 1186
MwoI	GCNNNNNNNGC	4 cut(s)	243, 511, 520, 621
NdeI	CATATG	1 cut(s)	1927
NdeII	GATC	6 cut(s)	499, 1338, 1699, 1752, 1887, 1986
NlaIII	CATG	9 cut(s)	556, 965, 991, 1043, 1520, 1633, 1760, 1824, 2071
NlaIV	GGNNCC	2 cut(s)	1965, 1988
NmeAIII	GCCGAG	1 cut(s)	370
NmuCI	GTSAC	2 cut(s)	1447, 1555
NspI	RCATGY	2 cut(s)	556, 1824
NspV	TTCGAA	1 cut(s)	309
OliI	CACNNNNGTG	1 cut(s)	797
PagI	TCATGA	1 cut(s)	987
PaqCI	CACCTGC	1 cut(s)	380
PcsI	WCGNNNNNNNCGW	1 cut(s)	291
PdmI	GAANNNNTTC	1 cut(s)	1868
PfeI	GAWTC	6 cut(s)	401, 706, 830, 935, 1166, 1970
PflFI	GACNNNGTC	1 cut(s)	353
PkrI	GCNGC	8 cut(s)	275, 522, 617, 811, 1188, 1651, 1777, 2066
PleI	GAGTC	4 cut(s)	290, 338, 1702, 1841
PmeI	GTTTAAAC	1 cut(s)	1588
PpsI	GAGTC	4 cut(s)	290, 338, 1702, 1841
PshBI	ATTAAT	1 cut(s)	1467
PsiI	TTATAA	1 cut(s)	1676
Psp6I	CCWGG	1 cut(s)	1232
PspGI	CCWGG	1 cut(s)	1232
PspN4I	GGNNCC	2 cut(s)	1965, 1988
PspPI	GGNCC	3 cut(s)	162, 522, 1743
PstI	CTGCAG	1 cut(s)	275
PstNI	CAGNNNCTG	1 cut(s)	1973
PsuI	RGATCY	2 cut(s)	1752, 1986
PsyI	GACNNNGTC	1 cut(s)	353
RsaI	GTAC	5 cut(s)	611, 983, 1130, 1404, 1660
RsaNI	GTAC	5 cut(s)	610, 982, 1129, 1403, 1659
RseI	CAYNNNNRTG	2 cut(s)	198, 797
SalI	GTCGAC	1 cut(s)	203
SaqAI	TTAA	9 cut(s)	480, 603, 1208, 1272, 1397, 1467, 1478, 1587, 1593
SatI	GCNGC	8 cut(s)	274, 521, 616, 810, 1187, 1650, 1776, 2065
Sau3AI	GATC	6 cut(s)	499, 1338, 1699, 1752, 1887, 1986
Sau96I	GGNCC	3 cut(s)	162, 522, 1743
SchI	GAGTC	4 cut(s)	290, 338, 1703, 1841
ScrFI	CCNGG	1 cut(s)	1234
SduI	GDGCHC	1 cut(s)	1261
SfaNI	GCATC	3 cut(s)	285, 967, 1299
SfcI	CTRYAG	1 cut(s)	271
SfuI	TTCGAA	1 cut(s)	309
SinI	GGWCC	1 cut(s)	162
SmiMI	CAYNNNNRTG	2 cut(s)	198, 797
SmlI	CTYRAG	1 cut(s)	2011
SmoI	CTYRAG	1 cut(s)	2011
SspMI	CTAG	3 cut(s)	1145, 1706, 1907
StyD4I	CCNGG	1 cut(s)	1232
StyI	CCWWGG	1 cut(s)	423
TaaI	ACNGT	1 cut(s)	491
TaiI	ACGT	3 cut(s)	381, 1022, 1176
TaqII	GACCGA	1 cut(s)	1334
TatI	WGTACW	2 cut(s)	981, 1128
TauI	GCSGC	5 cut(s)	523, 618, 812, 1189, 2067
TfiI	GAWTC	6 cut(s)	401, 706, 830, 935, 1166, 1970
Tru1I	TTAA	9 cut(s)	480, 603, 1208, 1272, 1397, 1467, 1478, 1587, 1593
Tru9I	TTAA	9 cut(s)	480, 603, 1208, 1272, 1397, 1467, 1478, 1587, 1593
TscAI	CASTG	3 cut(s)	164, 532, 1900
TseFI	GTSAC	2 cut(s)	1447, 1555
TseI	GCWGC	3 cut(s)	273, 1649, 1775
Tsp45I	GTSAC	2 cut(s)	1447, 1555
TspDTI	ATGAA	4 cut(s)	669, 791, 1028, 1944
TspGWI	ACGGA	1 cut(s)	230
TspRI	CASTG	3 cut(s)	164, 532, 1900
Tth111I	GACNNNGTC	1 cut(s)	353
VpaK11BI	GGWCC	1 cut(s)	162
VspI	ATTAAT	1 cut(s)	1467
XagI	CCTNNNNNAGG	1 cut(s)	1533
XapI	RAATTY	3 cut(s)	820, 1427, 1807
XceI	RCATGY	2 cut(s)	556, 1824
XmiI	GTMKAC	3 cut(s)	204, 448, 1845
XmnI	GAANNNNTTC	1 cut(s)	1868
XspI	CTAG	3 cut(s)	1145, 1706, 1907

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.