Prupe.5G138700_v2.0.a1

glutamyl-tRNA(Gln) amidotransferase subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
13029852 .. 13034198
4347 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G138700.2

Sequence Viewer

Length: 1794 bp
ATGATGCTGAAGGAGAAGTATCTTCCATTAGTAAGTGGGTGGACCCACAGTGGTATCACTTGTGTCATATTTCTAGCTGTGATCTGTTGCCGCACTGTTGCTTCAGATGTTAAAAATGTGAAGAGTGATGAGCACAGTGTTTGTTGGGCAAGAGTTGGTCATTCTTACCCACTTAAATGTGCATTTGAGTTGTTTGACTCCAGTTTCTTCAATAACACAAAGATTCTGGAGATTGTGAAGGGTCAAAAGGAGTTCAACATCCCTATATTCACAGCTAATCGAAAATTAGTTGCTTCAGTGAATGGAGGTTTGCATGACCCGTCTTACTTGGTATTCAATTCTGCTTGGGGCAGTGAGCAATCACAGCATGTAACTAAAAGATTCAAGTACCCTTCTCTGTCTGGCATTAAAAAACCCAGAAGTGAACAAGATATTGCCTTTATGAGTATTCTTGAATTGGGAGAGCTCATTAAGACAAAGCAACTTACATCTAAGGAGCTTACTAAATTTTTTCTGAAAAGACTTAAAAGGTACAATCATGCTCTTGAGGCGGTGGTAACTTATACCGAAGAATTAGCATACAAGCAAGCAAAAGAGGCTGATAAACTTCTTGCTCAAGGAGTATATTTGGGTCCTCTGCATGGGATTCCTTATGGTTTGAAGGATATAATTGCAGTTCCCCACTACAAAACAACTTGGGGTTCGACAAGTTTCAAAAATCAAGTTCTGGACATTGAAGCTTGGGTGTACAAGAGGTTGAAGTCTGCAGGGGCAGTTCTTGTTGCTAAGCTTGTTTCTGGATCACTGGCATATGATGACATCTGGTTTGGTGGTAGAACAAGGAACCCCTGGAATATCGAGGAGTTCTCTACAGGTTCATCAGCCGGACCTGCTGCCTCCACATCAGCTGGTATGGTACCATTTGCAATTGGATCAGAAACAGCTGGTTCTGTGACCTATCCTGCTGCACGCTGTGGAGTGACAGCATTGCGCCCAACATTCGGCACAGTTGGCCGAACTGGTGTAATGAGCTTATCGGAAAGCTTGGATAAGCTTGGCCCTTTCTGTAGAAGTGCCACAGATTGTGCAATTATTCTGGATGCCATTAGAGGAAAGGACCCAGATGATCTTTCATCAAGAGACATTCTCCTTGATGATCCATTTTCAGTTGACATTACAAAGCTTACTGTTGGATATCTAGAAGATGCTGAGATGGAGGTTGTTCATGTTCTTGCATCAAAAGGTGTAAATATGATCCCTTTCAAGCTAAACTACACAGTTGACTCTGTTCAAGGCATCCTAAATTTTACAATGGACGTGGATATGTTGGCTCACTTTGATGAGTGGCAGAGATCAGGGAAGGATGATGTTTATGAAGCTCAAGAACAATGGCCTACCGAACTCCGGCGTGCACGTGTAATTCCAGCAGTAGACTATGTGCAGGCACAAAGAGCAAGGGGAAAGTTAATCCGGGAAGTAAGAGAGAGTTTTACTGTGGATGCGTTCATTGGCAATGCAACTGACTGGGAAAGAGTTTGCTTGGGAAATCTAGTTGGTTTGCCTGTAATTGTTGTTCCAACAGGGTTTAAGAACATACCAAATCCACCTCCTAACAACACCACTCGAAGAAGAACCACTATCACCACCGGTATCTATGCTCCTCCTGAACGTGACCATATTGCTCTTGCACTTGCTATGGCTTACCAATCAGTCACCAATCACCATAGGCAGCAGCCTCCTATTGATGATCTTGGACCAAATGACCCAATCCCAAGTTCTCCCACATCATCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

598

Amino Acids

66.03

Weight (kDa)

7.96

Isoelectric Point (pI)

35.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 898
Acc65I GGTACC 1 cut(s) 916
AccB1I GGYRCC 1 cut(s) 916
AccI GTMKAC 1 cut(s) 1431
AciI CCGC 2 cut(s) 91, 551
AclWI GGATC 4 cut(s) 808, 940, 1151, 1249
AcoI YGGCCR 1 cut(s) 1012
AcsI RAATTY 2 cut(s) 506, 1303
AcuI CTGAAG 3 cut(s) 29, 87, 279
AcvI CACGTG 1 cut(s) 1415
AdeI CACNNNGTG 1 cut(s) 974
AfaI GTAC 4 cut(s) 389, 533, 749, 918
AfiI CCNNNNNNNGG 3 cut(s) 641, 1001, 1404
AflIII ACRYGT 1 cut(s) 1414
AgeI ACCGGT 1 cut(s) 1646
AjiI CACGTC 1 cut(s) 1318
AjnI CCWGG 1 cut(s) 848
AjuI GAANNNNNNNTTGG 2 cut(s) 1759, 1791
Alw21I GWGCWC 3 cut(s) 135, 468, 1414
Alw26I GTCTC 1 cut(s) 1134
Alw44I GTGCAC 1 cut(s) 1410
AlwI GGATC 4 cut(s) 808, 940, 1151, 1249
AoxI GGCC 3 cut(s) 1012, 1057, 1391
ApaLI GTGCAC 1 cut(s) 1410
ApeKI GCWGC 4 cut(s) 893, 965, 1729, 1732
ApoI RAATTY 2 cut(s) 506, 1303
ArsI GACNNNNNNTTYG 2 cut(s) 809, 841
AsiGI ACCGGT 1 cut(s) 1646
Asp718I GGTACC 1 cut(s) 916
AspLEI GCGC 1 cut(s) 993
AspS9I GGNCC 6 cut(s) 42, 632, 887, 1058, 1117, 1754
AsuC2I CCSGG 1 cut(s) 1472
AsuHPI GGTGA 3 cut(s) 1633, 1705, 1712
AvaII GGWCC 5 cut(s) 42, 632, 887, 1117, 1754
BaeGI GKGCMC 1 cut(s) 1414
BaeI ACNNNNGTAYC 2 cut(s) 37, 70
BanI GGYRCC 1 cut(s) 916
BanII GRGCYC 1 cut(s) 468
BbrPI CACGTG 1 cut(s) 1415
Bbv12I GWGCWC 3 cut(s) 135, 468, 1414
BbvI GCAGC 4 cut(s) 880, 952, 1741, 1744
BccI CCATC 1 cut(s) 1207
BciT130I CCWGG 1 cut(s) 850
BcnI CCSGG 1 cut(s) 1472
BcoDI GTCTC 1 cut(s) 1134
BfaI CTAG 3 cut(s) 74, 1199, 1550
BfmI CTRYAG 3 cut(s) 765, 870, 1066
BfuAI ACCTGC 1 cut(s) 898
BisI GCNGC 5 cut(s) 91, 894, 966, 1730, 1733
BlpI GCTNAGC 1 cut(s) 786
BlsI GCNGC 5 cut(s) 92, 895, 967, 1731, 1734
Bme1390I CCNGG 2 cut(s) 850, 1472
Bme18I GGWCC 5 cut(s) 42, 632, 887, 1117, 1754
BmgBI CACGTC 1 cut(s) 1318
BmgT120I GGNCC 6 cut(s) 42, 632, 887, 1058, 1117, 1754
BmiI GGNNCC 5 cut(s) 44, 633, 845, 918, 1119
BmrFI CCNGG 2 cut(s) 850, 1472
BmrI ACTGGG 1 cut(s) 1534
BmsI GCATC 5 cut(s) 1090, 1195, 1244, 1305, 1489
BmuI ACTGGG 1 cut(s) 1534
BplI GAGNNNNNCTC 4 cut(s) 851, 883, 1131, 1163
BpmI CTGGAG 2 cut(s) 184, 248
Bpu1102I GCTNAGC 1 cut(s) 786
BpuEI CTTGAG 3 cut(s) 566, 600, 1365
BpuMI CCSGG 1 cut(s) 1472
BsaAI YACGTR 1 cut(s) 1415
BsaJI CCNNGG 1 cut(s) 848
BsaWI WCCGGW 1 cut(s) 1646
Bsc4I CCNNNNNNNGG 3 cut(s) 641, 1001, 1404
Bse118I RCCGGY 1 cut(s) 1646
Bse1I ACTGG 4 cut(s) 201, 810, 1024, 1529
Bse3DI GCAATG 2 cut(s) 986, 1519
BseBI CCWGG 1 cut(s) 850
BseDI CCNNGG 1 cut(s) 848
BseGI GGATG 5 cut(s) 258, 1105, 1296, 1369, 1504
BseLI CCNNNNNNNGG 3 cut(s) 641, 1001, 1404
BseMI GCAATG 2 cut(s) 986, 1519
BseMII CTCAG 1 cut(s) 1200
BseNI ACTGG 4 cut(s) 201, 810, 1024, 1529
BseRI GAGGAG 2 cut(s) 875, 1650
BseSI GKGCMC 1 cut(s) 1414
BseXI GCAGC 4 cut(s) 880, 952, 1741, 1744
BsgI GTGCAG 2 cut(s) 951, 1460
BshFI GGCC 3 cut(s) 1014, 1059, 1393
BshNI GGYRCC 1 cut(s) 916
BshTI ACCGGT 1 cut(s) 1646
BsiHKAI GWGCWC 3 cut(s) 135, 468, 1414
BsiSI CCGG 4 cut(s) 885, 1405, 1471, 1647
BslI CCNNNNNNNGG 3 cut(s) 641, 1001, 1404
BsmAI GTCTC 1 cut(s) 1134
BsnI GGCC 3 cut(s) 1014, 1059, 1393
Bsp1286I GDGCHC 3 cut(s) 135, 468, 1414
Bsp1407I TGTACA 1 cut(s) 747
Bsp143I GATC 8 cut(s) 81, 800, 932, 1126, 1156, 1254, 1352, 1747
Bsp1720I GCTNAGC 1 cut(s) 786
BspACI CCGC 2 cut(s) 91, 551
BspANI GGCC 3 cut(s) 1014, 1059, 1393
BspCNI CTCAG 1 cut(s) 1201
BspLI GGNNCC 5 cut(s) 44, 633, 845, 918, 1119
BspMAI CTGCAG 1 cut(s) 769
BspMI ACCTGC 1 cut(s) 898
BspPI GGATC 4 cut(s) 808, 940, 1151, 1249
BspT107I GGYRCC 1 cut(s) 916
BsrDI GCAATG 2 cut(s) 986, 1519
BsrFI RCCGGY 1 cut(s) 1646
BsrGI TGTACA 1 cut(s) 747
BsrI ACTGG 4 cut(s) 201, 810, 1024, 1529
BssAI RCCGGY 1 cut(s) 1646
BssECI CCNNGG 1 cut(s) 848
BssMI GATC 8 cut(s) 81, 800, 932, 1126, 1156, 1254, 1352, 1747
Bst2UI CCWGG 1 cut(s) 850
Bst4CI ACNGT 7 cut(s) 50, 97, 137, 1009, 1189, 1279, 1495
Bst6I CTCTTC 1 cut(s) 116
BstAUI TGTACA 1 cut(s) 747
BstBAI YACGTR 1 cut(s) 1415
BstC8I GCNNGC 4 cut(s) 588, 970, 1410, 1443
BstDEI CTNAG 3 cut(s) 492, 786, 1209
BstF5I GGATG 5 cut(s) 258, 1105, 1296, 1369, 1504
BstHHI GCGC 1 cut(s) 993
BstKTI GATC 8 cut(s) 84, 803, 935, 1129, 1159, 1257, 1355, 1750
BstMAI GTCTC 1 cut(s) 1134
BstMBI GATC 8 cut(s) 81, 800, 932, 1126, 1156, 1254, 1352, 1747
BstMWI GCNNNNNNNGC 6 cut(s) 364, 548, 596, 890, 1011, 1451
BstNI CCWGG 1 cut(s) 850
BstNSI RCATGY 1 cut(s) 371
BstSCI CCNGG 2 cut(s) 848, 1470
BstSFI CTRYAG 3 cut(s) 765, 870, 1066
BstSLI GKGCMC 1 cut(s) 1414
BstV1I GCAGC 4 cut(s) 880, 952, 1741, 1744
BsuRI GGCC 3 cut(s) 1014, 1059, 1393
BtrI CACGTC 1 cut(s) 1318
BtsCI GGATG 5 cut(s) 258, 1105, 1296, 1369, 1504
BtsI GCAGTG 1 cut(s) 358
BtsIMutI CAGTG 6 cut(s) 55, 93, 142, 303, 358, 803
BveI ACCTGC 1 cut(s) 898
Cac8I GCNNGC 4 cut(s) 588, 970, 1410, 1443
CfoI GCGC 1 cut(s) 993
Cfr10I RCCGGY 1 cut(s) 1646
Cfr13I GGNCC 6 cut(s) 42, 632, 887, 1058, 1117, 1754
Csp6I GTAC 4 cut(s) 388, 532, 748, 917
CspAI ACCGGT 1 cut(s) 1646
CspCI CAANNNNNGTGG 2 cut(s) 1299, 1334
CviAII CATG 5 cut(s) 314, 368, 539, 641, 1226
CviQI GTAC 4 cut(s) 388, 532, 748, 917
DdeI CTNAG 3 cut(s) 492, 786, 1209
DpnI GATC 8 cut(s) 83, 802, 934, 1128, 1158, 1256, 1354, 1749
DpnII GATC 8 cut(s) 81, 800, 932, 1126, 1156, 1254, 1352, 1747
DraIII CACNNNGTG 1 cut(s) 974
EaeI YGGCCR 1 cut(s) 1012
Eam1104I CTCTTC 1 cut(s) 116
EarI CTCTTC 1 cut(s) 116
Ecl136II GAGCTC 1 cut(s) 466
Eco24I GRGCYC 1 cut(s) 468
Eco32I GATATC 1 cut(s) 1196
Eco47I GGWCC 5 cut(s) 42, 632, 887, 1117, 1754
Eco53kI GAGCTC 1 cut(s) 466
Eco57I CTGAAG 3 cut(s) 29, 87, 279
Eco72I CACGTG 1 cut(s) 1415
EcoICRI GAGCTC 1 cut(s) 466
EcoO109I RGGNCCY 2 cut(s) 632, 1117
EcoRII CCWGG 1 cut(s) 848
EcoRV GATATC 1 cut(s) 1196
EcoT38I GRGCYC 1 cut(s) 468
FaeI CATG 5 cut(s) 317, 371, 542, 644, 1229
FatI CATG 5 cut(s) 313, 367, 538, 640, 1225
FauNDI CATATG 1 cut(s) 811
FblI GTMKAC 1 cut(s) 1431
Fnu4HI GCNGC 5 cut(s) 91, 894, 966, 1730, 1733
FokI GGATG 5 cut(s) 245, 1112, 1283, 1376, 1511
FriOI GRGCYC 1 cut(s) 468
Fsp4HI GCNGC 5 cut(s) 91, 894, 966, 1730, 1733
FspBI CTAG 3 cut(s) 74, 1199, 1550
GlaI GCGC 1 cut(s) 992
GluI GCNGC 5 cut(s) 91, 894, 966, 1730, 1733
GsuI CTGGAG 2 cut(s) 184, 248
HaeIII GGCC 3 cut(s) 1014, 1059, 1393
HapII CCGG 4 cut(s) 885, 1405, 1471, 1647
HhaI GCGC 1 cut(s) 993
Hin1II CATG 5 cut(s) 317, 371, 542, 644, 1229
Hin6I GCGC 1 cut(s) 991
HinP1I GCGC 1 cut(s) 991
HincII GTYRAC 2 cut(s) 1171, 1282
HindII GTYRAC 2 cut(s) 1171, 1282
HindIII AAGCTT 5 cut(s) 738, 788, 1042, 1052, 1181
HinfI GANTC 5 cut(s) 197, 223, 381, 646, 1283
HpaII CCGG 4 cut(s) 885, 1405, 1471, 1647
HphI GGTGA 3 cut(s) 1633, 1705, 1712
Hpy166II GTNNAC 7 cut(s) 42, 425, 748, 1171, 1282, 1412, 1432
Hpy188I TCNGA 4 cut(s) 106, 516, 937, 1039
Hpy8I GTNNAC 7 cut(s) 42, 425, 748, 1171, 1282, 1412, 1432
HpyAV CCTTC 5 cut(s) 4, 232, 402, 655, 1354
HpyCH4III ACNGT 7 cut(s) 50, 97, 137, 1009, 1189, 1279, 1495
HpyCH4IV ACGT 3 cut(s) 1317, 1414, 1669
HpyF10VI GCNNNNNNNGC 6 cut(s) 364, 548, 596, 890, 1011, 1451
HpyF3I CTNAG 3 cut(s) 492, 786, 1209
HpySE526I ACGT 3 cut(s) 1317, 1414, 1669
Hsp92II CATG 5 cut(s) 317, 371, 542, 644, 1229
HspAI GCGC 1 cut(s) 991
KpnI GGTACC 1 cut(s) 920
Kzo9I GATC 8 cut(s) 81, 800, 932, 1126, 1156, 1254, 1352, 1747
LmnI GCTCC 2 cut(s) 496, 1663
Lsp1109I GCAGC 4 cut(s) 880, 952, 1741, 1744
LweI GCATC 5 cut(s) 1090, 1195, 1244, 1305, 1489
MaeI CTAG 3 cut(s) 74, 1199, 1550
MaeII ACGT 3 cut(s) 1317, 1414, 1669
MaeIII GTNAC 6 cut(s) 370, 556, 952, 979, 1670, 1711
MalI GATC 8 cut(s) 83, 802, 934, 1128, 1158, 1256, 1354, 1749
MboI GATC 8 cut(s) 81, 800, 932, 1126, 1156, 1254, 1352, 1747
MboII GAAGA 7 cut(s) 14, 133, 199, 581, 1214, 1638, 1641
MfeI CAATTG 1 cut(s) 927
MhlI GDGCHC 3 cut(s) 135, 468, 1414
MlyI GAGTC 2 cut(s) 191, 1277
MmeI TCCRAC 2 cut(s) 1171, 1601
MseI TTAA 7 cut(s) 111, 174, 408, 471, 525, 1466, 1587
MslI CAYNNNNRTG 2 cut(s) 175, 1338
MspA1I CMGCKG 2 cut(s) 908, 944
MspI CCGG 4 cut(s) 885, 1405, 1471, 1647
MspR9I CCNGG 2 cut(s) 850, 1472
MunI CAATTG 1 cut(s) 927
MvaI CCWGG 1 cut(s) 850
MwoI GCNNNNNNNGC 6 cut(s) 364, 548, 596, 890, 1011, 1451
NciI CCSGG 1 cut(s) 1472
NdeI CATATG 1 cut(s) 811
NdeII GATC 8 cut(s) 81, 800, 932, 1126, 1156, 1254, 1352, 1747
NlaIII CATG 5 cut(s) 317, 371, 542, 644, 1229
NlaIV GGNNCC 5 cut(s) 44, 633, 845, 918, 1119
NmuCI GTSAC 4 cut(s) 952, 979, 1670, 1711
NspI RCATGY 1 cut(s) 371
PfeI GAWTC 3 cut(s) 223, 381, 646
PfoI TCCNGGA 1 cut(s) 1470
PinAI ACCGGT 1 cut(s) 1646
PkrI GCNGC 5 cut(s) 92, 895, 967, 1731, 1734
PleI GAGTC 2 cut(s) 191, 1277
PmaCI CACGTG 1 cut(s) 1415
PmlI CACGTG 1 cut(s) 1415
PpsI GAGTC 2 cut(s) 191, 1277
Ppu21I YACGTR 1 cut(s) 1415
PpuMI RGGWCCY 2 cut(s) 632, 1117
Psp124BI GAGCTC 1 cut(s) 468
Psp5II RGGWCCY 2 cut(s) 632, 1117
Psp6I CCWGG 1 cut(s) 848
PspCI CACGTG 1 cut(s) 1415
PspGI CCWGG 1 cut(s) 848
PspN4I GGNNCC 5 cut(s) 44, 633, 845, 918, 1119
PspPI GGNCC 6 cut(s) 42, 632, 887, 1058, 1117, 1754
PspPPI RGGWCCY 2 cut(s) 632, 1117
PsrI GAACNNNNNNTAC 2 cut(s) 1557, 1589
PstI CTGCAG 1 cut(s) 769
PvuII CAGCTG 2 cut(s) 908, 944
RsaI GTAC 4 cut(s) 389, 533, 749, 918
RsaNI GTAC 4 cut(s) 388, 532, 748, 917
RseI CAYNNNNRTG 2 cut(s) 175, 1338
SacI GAGCTC 1 cut(s) 468
SaqAI TTAA 7 cut(s) 111, 174, 408, 471, 525, 1466, 1587
SatI GCNGC 5 cut(s) 91, 894, 966, 1730, 1733
Sau3AI GATC 8 cut(s) 81, 800, 932, 1126, 1156, 1254, 1352, 1747
Sau96I GGNCC 6 cut(s) 42, 632, 887, 1058, 1117, 1754
SchI GAGTC 2 cut(s) 191, 1277
ScrFI CCNGG 2 cut(s) 850, 1472
SduI GDGCHC 3 cut(s) 135, 468, 1414
SfaNI GCATC 5 cut(s) 1090, 1195, 1244, 1305, 1489
SfcI CTRYAG 3 cut(s) 765, 870, 1066
SinI GGWCC 5 cut(s) 42, 632, 887, 1117, 1754
SmiMI CAYNNNNRTG 2 cut(s) 175, 1338
SmlI CTYRAG 3 cut(s) 545, 615, 1380
SmoI CTYRAG 3 cut(s) 545, 615, 1380
SsiI CCGC 2 cut(s) 91, 551
SspMI CTAG 3 cut(s) 74, 1199, 1550
SstI GAGCTC 1 cut(s) 468
StyD4I CCNGG 2 cut(s) 848, 1470
TaaI ACNGT 7 cut(s) 50, 97, 137, 1009, 1189, 1279, 1495
TaiI ACGT 3 cut(s) 1320, 1417, 1672
TaqI TCGA 4 cut(s) 280, 704, 858, 1624
TatI WGTACW 1 cut(s) 747
TauI GCSGC 1 cut(s) 93
TfiI GAWTC 3 cut(s) 223, 381, 646
Tru1I TTAA 7 cut(s) 111, 174, 408, 471, 525, 1466, 1587
Tru9I TTAA 7 cut(s) 111, 174, 408, 471, 525, 1466, 1587
TscAI CASTG 6 cut(s) 55, 100, 142, 303, 358, 810
TseFI GTSAC 4 cut(s) 952, 979, 1670, 1711
TseI GCWGC 4 cut(s) 893, 965, 1729, 1732
Tsp45I GTSAC 4 cut(s) 952, 979, 1670, 1711
TspDTI ATGAA 5 cut(s) 867, 1122, 1214, 1389, 1495
TspRI CASTG 6 cut(s) 55, 100, 142, 303, 358, 810
VneI GTGCAC 1 cut(s) 1410
VpaK11BI GGWCC 5 cut(s) 42, 632, 887, 1117, 1754
XapI RAATTY 2 cut(s) 506, 1303
XbaI TCTAGA 1 cut(s) 1198
XceI RCATGY 1 cut(s) 371
XmiI GTMKAC 1 cut(s) 1431
XspI CTAG 3 cut(s) 74, 1199, 1550
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.