Amidase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G07360 AT5G07360 AT5G07360 |
| fragaria_vesca | FvH4_5g09970 FvH4_5g09970 FvH4_5g09970 FvH4_5g09971 |
| malus_domestica | MD00G1076500.v1.1 MD00G1076700.v1.1 MD14G1144500.v1.1 |
| prunus_persica | Prupe.5G138700_v2.0.a1 Prupe.5G138700_v2.0.a1 Prupe.5G138700_v2.0.a1 Prupe.5G138700_v2.0.a1 |
| pyrus_communis | pycom06g11910 |
| rosa_chinensis | RchiOBHm_Chr7g0188291 RchiOBHm_Chr7g0188311 |
| rosa_laevigata | RLG00000004709 RLG00000004710 |
| rosa_multiflora | Rmu_sc0008750.1_g000007 |
| rosa_roxburghii | Rroxscaffold_3G00266520 |
| rosa_rugosa | Rorug06G0489800 |
| rosa_samantha | Rh7AG094200 Rh7AG094300 Rh7BG095800 Rh7BG095900 Rh7CG096000 Rh7DG096200 |
| rosa_wichuraiana | Rw7G008120 Rw7G008130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1839, 2433, 2469 |
| AatII | GACGTC | 1 cut(s) | 1290 |
| Acc36I | ACCTGC | 4 cut(s) | 868, 869, 2618, 2689 |
| AccB1I | GGYRCC | 1 cut(s) | 886 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2720 |
| AccI | GTMKAC | 1 cut(s) | 1401 |
| AccII | CGCG | 4 cut(s) | 755, 940, 1208, 1386 |
| AciI | CCGC | 3 cut(s) | 801, 1206, 2610 |
| AclWI | GGATC | 9 cut(s) | 778, 910, 1121, 2527, 2831, 2844, 2870, 2883, 2962 |
| AcoI | YGGCCR | 1 cut(s) | 982 |
| AcsI | RAATTY | 2 cut(s) | 2582, 2639 |
| AcuI | CTGAAG | 3 cut(s) | 249, 558, 2498 |
| AcyI | GRCGYC | 1 cut(s) | 1287 |
| AdeI | CACNNNGTG | 1 cut(s) | 2693 |
| AfaI | GTAC | 3 cut(s) | 36, 648, 2315 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 428, 611, 971, 1580, 1983, 1984, 2360, 2720 |
| AflIII | ACRYGT | 1 cut(s) | 1384 |
| AgeI | ACCGGT | 1 cut(s) | 2738 |
| AjnI | CCWGG | 5 cut(s) | 1579, 2274, 2459, 2883, 3155 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 799, 831 |
| Alw21I | GWGCWC | 3 cut(s) | 1384, 2250, 3129 |
| Alw26I | GTCTC | 5 cut(s) | 1104, 1864, 1953, 2788, 2853 |
| Alw44I | GTGCAC | 2 cut(s) | 1380, 3125 |
| AlwI | GGATC | 9 cut(s) | 778, 910, 1121, 2527, 2831, 2844, 2870, 2883, 2962 |
| AoxI | GGCC | 4 cut(s) | 982, 1361, 2457, 3106 |
| ApaLI | GTGCAC | 2 cut(s) | 1380, 3125 |
| ApeKI | GCWGC | 7 cut(s) | 863, 935, 1318, 1696, 2612, 2684, 3117 |
| ApoI | RAATTY | 2 cut(s) | 2582, 2639 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 779, 811, 1103, 1135, 2528, 2560 |
| AseI | ATTAAT | 1 cut(s) | 1997 |
| AsiGI | ACCGGT | 1 cut(s) | 2738 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2057 |
| AspLEI | GCGC | 4 cut(s) | 940, 942, 963, 1701 |
| AsuC2I | CCSGG | 2 cut(s) | 1091, 1442 |
| AsuHPI | GGTGA | 9 cut(s) | 87, 538, 1600, 1672, 1781, 1840, 1943, 1955, 2710 |
| BaeGI | GKGCMC | 2 cut(s) | 1384, 3129 |
| BamHI | GGATCC | 2 cut(s) | 2836, 2875 |
| BanI | GGYRCC | 1 cut(s) | 886 |
| BanII | GRGCYC | 1 cut(s) | 2250 |
| BbsI | GAAGAC | 2 cut(s) | 11, 405 |
| Bbv12I | GWGCWC | 3 cut(s) | 1384, 2250, 3129 |
| BbvCI | CCTCAGC | 2 cut(s) | 874, 2623 |
| BbvI | GCAGC | 7 cut(s) | 850, 922, 1330, 1708, 2599, 2671, 3104 |
| BccI | CCATC | 1 cut(s) | 1177 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2146, 2180, 2198, 2232 |
| BciT130I | CCWGG | 5 cut(s) | 1581, 2276, 2461, 2885, 3157 |
| BciVI | GTATCC | 1 cut(s) | 3031 |
| BclI | TGATCA | 1 cut(s) | 1921 |
| BcnI | CCSGG | 2 cut(s) | 1091, 1442 |
| BcoDI | GTCTC | 5 cut(s) | 1104, 1864, 1953, 2788, 2853 |
| BfaI | CTAG | 7 cut(s) | 65, 345, 1169, 1202, 1652, 2033, 2525 |
| BfmI | CTRYAG | 3 cut(s) | 655, 1036, 2014 |
| BfoI | RGCGCY | 1 cut(s) | 1702 |
| BfuAI | ACCTGC | 4 cut(s) | 868, 869, 2618, 2689 |
| BfuI | GTATCC | 1 cut(s) | 3031 |
| BisI | GCNGC | 8 cut(s) | 864, 936, 1206, 1319, 1697, 2613, 2685, 3118 |
| BlpI | GCTNAGC | 1 cut(s) | 2928 |
| BlsI | GCNGC | 8 cut(s) | 865, 937, 1207, 1320, 1698, 2614, 2686, 3119 |
| Bme1390I | CCNGG | 7 cut(s) | 1091, 1442, 1581, 2276, 2461, 2885, 3157 |
| BmrFI | CCNGG | 7 cut(s) | 1091, 1442, 1581, 2276, 2461, 2885, 3157 |
| BmrI | ACTGGG | 1 cut(s) | 77 |
| BmsI | GCATC | 9 cut(s) | 183, 1060, 1165, 1459, 1536, 1993, 2660, 2809, 2914 |
| BmuI | ACTGGG | 1 cut(s) | 77 |
| BpiI | GAAGAC | 2 cut(s) | 11, 405 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 821, 853, 2481, 2513 |
| BpmI | CTGGAG | 1 cut(s) | 2770 |
| Bpu10I | CCTNAGC | 6 cut(s) | 874, 1657, 1887, 2153, 2623, 3113 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2928 |
| BpuEI | CTTGAG | 4 cut(s) | 536, 1335, 2348, 2891 |
| BpuMI | CCSGG | 2 cut(s) | 1091, 1442 |
| Bsa29I | ATCGAT | 1 cut(s) | 1710 |
| BsaHI | GRCGYC | 1 cut(s) | 1287 |
| BsaI | GGTCTC | 1 cut(s) | 1864 |
| BsaWI | WCCGGW | 1 cut(s) | 2738 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1718, 1748 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 428, 611, 971, 1580, 1983, 1984, 2360, 2720 |
| Bse118I | RCCGGY | 1 cut(s) | 2738 |
| Bse1I | ACTGG | 8 cut(s) | 55, 83, 98, 847, 985, 994, 1618, 2596 |
| Bse3DI | GCAATG | 7 cut(s) | 402, 956, 1489, 1644, 2214, 2705, 2862 |
| BseBI | CCWGG | 5 cut(s) | 1581, 2276, 2461, 2885, 3157 |
| BseCI | ATCGAT | 1 cut(s) | 1710 |
| BseGI | GGATG | 9 cut(s) | 458, 1075, 1099, 1339, 1527, 1576, 2270, 2824, 3085 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 428, 611, 971, 1580, 1983, 1984, 2360, 2720 |
| BseMI | GCAATG | 7 cut(s) | 402, 956, 1489, 1644, 2214, 2705, 2862 |
| BseMII | CTCAG | 9 cut(s) | 45, 272, 888, 1623, 2300, 2637, 2919, 3104, 3175 |
| BseNI | ACTGG | 8 cut(s) | 55, 83, 98, 847, 985, 994, 1618, 2596 |
| BsePI | GCGCGC | 1 cut(s) | 938 |
| BseRI | GAGGAG | 2 cut(s) | 845, 1617 |
| BseSI | GKGCMC | 2 cut(s) | 1384, 3129 |
| BseXI | GCAGC | 7 cut(s) | 850, 922, 1330, 1708, 2599, 2671, 3104 |
| BseYI | CCCAGC | 2 cut(s) | 114, 737 |
| BsgI | GTGCAG | 2 cut(s) | 1430, 2670 |
| Bsh1236I | CGCG | 4 cut(s) | 755, 940, 1208, 1386 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1325 |
| BshFI | GGCC | 4 cut(s) | 984, 1363, 2459, 3108 |
| BshNI | GGYRCC | 1 cut(s) | 886 |
| BshTI | ACCGGT | 1 cut(s) | 2738 |
| BshVI | ATCGAT | 1 cut(s) | 1710 |
| BsiEI | CGRYCG | 1 cut(s) | 1325 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1384, 2250, 3129 |
| BsiSI | CCGG | 4 cut(s) | 372, 1091, 1441, 2739 |
| BslFI | GGGAC | 2 cut(s) | 1734, 2960 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 428, 611, 971, 1580, 1983, 1984, 2360, 2720 |
| BsmAI | GTCTC | 5 cut(s) | 1104, 1864, 1953, 2788, 2853 |
| BsmFI | GGGAC | 2 cut(s) | 1734, 2960 |
| BsmI | GAATGC | 2 cut(s) | 1266, 1472 |
| BsnI | GGCC | 4 cut(s) | 984, 1363, 2459, 3108 |
| Bso31I | GGTCTC | 1 cut(s) | 1864 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1384, 2250, 3129 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2928 |
| Bsp19I | CCATGG | 5 cut(s) | 610, 818, 1281, 2359, 2567 |
| Bsp68I | TCGCGA | 1 cut(s) | 755 |
| BspACI | CCGC | 3 cut(s) | 801, 1206, 2610 |
| BspANI | GGCC | 4 cut(s) | 984, 1363, 2459, 3108 |
| BspCNI | CTCAG | 9 cut(s) | 44, 273, 887, 1624, 2299, 2636, 2920, 3105, 3174 |
| BspDI | ATCGAT | 1 cut(s) | 1710 |
| BspFNI | CGCG | 4 cut(s) | 755, 940, 1208, 1386 |
| BspHI | TCATGA | 1 cut(s) | 2223 |
| BspMAI | CTGCAG | 1 cut(s) | 2018 |
| BspMI | ACCTGC | 4 cut(s) | 868, 869, 2618, 2689 |
| BspPI | GGATC | 9 cut(s) | 778, 910, 1121, 2527, 2831, 2844, 2870, 2883, 2962 |
| BspT107I | GGYRCC | 1 cut(s) | 886 |
| BspTNI | GGTCTC | 1 cut(s) | 1864 |
| BsrDI | GCAATG | 7 cut(s) | 402, 956, 1489, 1644, 2214, 2705, 2862 |
| BsrFI | RCCGGY | 1 cut(s) | 2738 |
| BsrI | ACTGG | 8 cut(s) | 55, 83, 98, 847, 985, 994, 1618, 2596 |
| BssAI | RCCGGY | 1 cut(s) | 2738 |
| BssHII | GCGCGC | 1 cut(s) | 938 |
| BssNI | GRCGYC | 1 cut(s) | 1287 |
| BssT1I | CCWWGG | 7 cut(s) | 462, 610, 818, 1281, 1510, 2359, 2567 |
| Bst2UI | CCWGG | 5 cut(s) | 1581, 2276, 2461, 2885, 3157 |
| Bst6I | CTCTTC | 2 cut(s) | 30, 2303 |
| BstACI | GRCGYC | 1 cut(s) | 1287 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2804 |
| BstC8I | GCNNGC | 9 cut(s) | 558, 582, 916, 940, 1384, 1413, 2511, 2617, 3129 |
| BstDSI | CCRYGG | 5 cut(s) | 610, 818, 1281, 2359, 2567 |
| BstEII | GGTNACC | 1 cut(s) | 1678 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 426 |
| BstF5I | GGATG | 9 cut(s) | 458, 1075, 1099, 1339, 1527, 1576, 2270, 2824, 3085 |
| BstFNI | CGCG | 4 cut(s) | 755, 940, 1208, 1386 |
| BstH2I | RGCGCY | 1 cut(s) | 1702 |
| BstHHI | GCGC | 4 cut(s) | 940, 942, 963, 1701 |
| BstMAI | GTCTC | 5 cut(s) | 1104, 1864, 1953, 2788, 2853 |
| BstMCI | CGRYCG | 1 cut(s) | 1325 |
| BstNI | CCWGG | 5 cut(s) | 1581, 2276, 2461, 2885, 3157 |
| BstPI | GGTNACC | 1 cut(s) | 1678 |
| BstSCI | CCNGG | 7 cut(s) | 1089, 1440, 1579, 2274, 2459, 2883, 3155 |
| BstSFI | CTRYAG | 3 cut(s) | 655, 1036, 2014 |
| BstSLI | GKGCMC | 2 cut(s) | 1384, 3129 |
| BstUI | CGCG | 4 cut(s) | 755, 940, 1208, 1386 |
| BstV1I | GCAGC | 7 cut(s) | 850, 922, 1330, 1708, 2599, 2671, 3104 |
| BstV2I | GAAGAC | 2 cut(s) | 11, 405 |
| BstX2I | RGATCY | 2 cut(s) | 2836, 2875 |
| BstYI | RGATCY | 2 cut(s) | 2836, 2875 |
| Bsu15I | ATCGAT | 1 cut(s) | 1710 |
| BsuI | GTATCC | 1 cut(s) | 3031 |
| BsuRI | GGCC | 4 cut(s) | 984, 1363, 2459, 3108 |
| BsuTUI | ATCGAT | 1 cut(s) | 1710 |
| BtgI | CCRYGG | 5 cut(s) | 610, 818, 1281, 2359, 2567 |
| BtsCI | GGATG | 9 cut(s) | 458, 1075, 1099, 1339, 1527, 1576, 2270, 2824, 3085 |
| BtsI | GCAGTG | 3 cut(s) | 528, 1781, 3149 |
| BtuMI | TCGCGA | 1 cut(s) | 755 |
| BveI | ACCTGC | 4 cut(s) | 868, 869, 2618, 2689 |
| Cac8I | GCNNGC | 9 cut(s) | 558, 582, 916, 940, 1384, 1413, 2511, 2617, 3129 |
| CciI | TCATGA | 1 cut(s) | 2223 |
| CfoI | GCGC | 4 cut(s) | 940, 942, 963, 1701 |
| Cfr10I | RCCGGY | 1 cut(s) | 2738 |
| ClaI | ATCGAT | 1 cut(s) | 1710 |
| CseI | GACGC | 4 cut(s) | 1364, 1775, 2699, 3109 |
| Csp6I | GTAC | 3 cut(s) | 35, 647, 2314 |
| CspAI | ACCGGT | 1 cut(s) | 2738 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1340, 1375, 3015, 3050 |
| CviQI | GTAC | 3 cut(s) | 35, 647, 2314 |
| DraI | TTTAAA | 2 cut(s) | 1234, 2983 |
| DraIII | CACNNNGTG | 1 cut(s) | 2693 |
| EaeI | YGGCCR | 1 cut(s) | 982 |
| Eam1104I | CTCTTC | 2 cut(s) | 30, 2303 |
| EarI | CTCTTC | 2 cut(s) | 30, 2303 |
| EciI | GGCGGA | 1 cut(s) | 816 |
| Ecl136II | GAGCTC | 1 cut(s) | 2248 |
| Eco130I | CCWWGG | 7 cut(s) | 462, 610, 818, 1281, 1510, 2359, 2567 |
| Eco147I | AGGCCT | 1 cut(s) | 2459 |
| Eco24I | GRGCYC | 1 cut(s) | 2250 |
| Eco31I | GGTCTC | 1 cut(s) | 1864 |
| Eco32I | GATATC | 1 cut(s) | 1166 |
| Eco53kI | GAGCTC | 1 cut(s) | 2248 |
| Eco57I | CTGAAG | 3 cut(s) | 249, 558, 2498 |
| Eco91I | GGTNACC | 1 cut(s) | 1678 |
| EcoICRI | GAGCTC | 1 cut(s) | 2248 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 426 |
| EcoO109I | RGGNCCY | 3 cut(s) | 602, 1087, 2351 |
| EcoO65I | GGTNACC | 1 cut(s) | 1678 |
| EcoRII | CCWGG | 5 cut(s) | 1579, 2274, 2459, 2883, 3155 |
| EcoRV | GATATC | 1 cut(s) | 1166 |
| EcoT14I | CCWWGG | 7 cut(s) | 462, 610, 818, 1281, 1510, 2359, 2567 |
| EcoT22I | ATGCAT | 1 cut(s) | 1474 |
| EcoT38I | GRGCYC | 1 cut(s) | 2250 |
| ErhI | CCWWGG | 7 cut(s) | 462, 610, 818, 1281, 1510, 2359, 2567 |
| FaqI | GGGAC | 2 cut(s) | 1734, 2960 |
| FauI | CCCGC | 1 cut(s) | 2617 |
| FauNDI | CATATG | 1 cut(s) | 1893 |
| FbaI | TGATCA | 1 cut(s) | 1921 |
| FblI | GTMKAC | 1 cut(s) | 1401 |
| Fnu4HI | GCNGC | 8 cut(s) | 864, 936, 1206, 1319, 1697, 2613, 2685, 3118 |
| FokI | GGATG | 9 cut(s) | 445, 1082, 1106, 1346, 1514, 1563, 2257, 2831, 3092 |
| FriOI | GRGCYC | 1 cut(s) | 2250 |
| Fsp4HI | GCNGC | 8 cut(s) | 864, 936, 1206, 1319, 1697, 2613, 2685, 3118 |
| FspBI | CTAG | 7 cut(s) | 65, 345, 1169, 1202, 1652, 2033, 2525 |
| GlaI | GCGC | 4 cut(s) | 939, 941, 962, 1700 |
| GluI | GCNGC | 8 cut(s) | 864, 936, 1206, 1319, 1697, 2613, 2685, 3118 |
| GsaI | CCCAGC | 2 cut(s) | 118, 741 |
| GsuI | CTGGAG | 1 cut(s) | 2770 |
| HaeII | RGCGCY | 1 cut(s) | 1702 |
| HaeIII | GGCC | 4 cut(s) | 984, 1363, 2459, 3108 |
| HapII | CCGG | 4 cut(s) | 372, 1091, 1441, 2739 |
| HgaI | GACGC | 4 cut(s) | 1364, 1775, 2699, 3109 |
| HhaI | GCGC | 4 cut(s) | 940, 942, 963, 1701 |
| Hin1I | GRCGYC | 1 cut(s) | 1287 |
| Hin6I | GCGC | 4 cut(s) | 938, 940, 961, 1699 |
| HinP1I | GCGC | 4 cut(s) | 938, 940, 961, 1699 |
| HincII | GTYRAC | 3 cut(s) | 1141, 2890, 3001 |
| HindII | GTYRAC | 3 cut(s) | 1141, 2890, 3001 |
| HpaII | CCGG | 4 cut(s) | 372, 1091, 1441, 2739 |
| HphI | GGTGA | 9 cut(s) | 87, 538, 1600, 1672, 1781, 1840, 1943, 1955, 2710 |
| Hpy166II | GTNNAC | 9 cut(s) | 42, 718, 1141, 1382, 1402, 2890, 3001, 3127, 3147 |
| Hpy8I | GTNNAC | 9 cut(s) | 42, 718, 1141, 1382, 1402, 2890, 3001, 3127, 3147 |
| Hpy99I | CGWCG | 3 cut(s) | 1292, 1380, 3125 |
| HpyCH4IV | ACGT | 2 cut(s) | 1287, 1968 |
| HpySE526I | ACGT | 2 cut(s) | 1287, 1968 |
| Hsp92I | GRCGYC | 1 cut(s) | 1287 |
| HspAI | GCGC | 4 cut(s) | 938, 940, 961, 1699 |
| Ksp22I | TGATCA | 1 cut(s) | 1921 |
| LmnI | GCTCC | 5 cut(s) | 466, 1630, 2245, 2278, 2489 |
| Lsp1109I | GCAGC | 7 cut(s) | 850, 922, 1330, 1708, 2599, 2671, 3104 |
| LweI | GCATC | 9 cut(s) | 183, 1060, 1165, 1459, 1536, 1993, 2660, 2809, 2914 |
| MaeI | CTAG | 7 cut(s) | 65, 345, 1169, 1202, 1652, 2033, 2525 |
| MaeII | ACGT | 2 cut(s) | 1287, 1968 |
| MaeIII | GTNAC | 9 cut(s) | 284, 340, 526, 922, 949, 1678, 1787, 2335, 2698 |
| MfeI | CAATTG | 2 cut(s) | 897, 2646 |
| MflI | RGATCY | 2 cut(s) | 2836, 2875 |
| MhlI | GDGCHC | 3 cut(s) | 1384, 2250, 3129 |
| MluI | ACGCGT | 1 cut(s) | 1384 |
| MlyI | GAGTC | 4 cut(s) | 161, 1955, 2668, 2758 |
| MmeI | TCCRAC | 2 cut(s) | 1141, 2738 |
| Mph1103I | ATGCAT | 1 cut(s) | 1474 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2057 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1532, 2722, 3054 |
| MspA1I | CMGCKG | 3 cut(s) | 854, 914, 2612 |
| MspI | CCGG | 4 cut(s) | 372, 1091, 1441, 2739 |
| MspR9I | CCNGG | 7 cut(s) | 1091, 1442, 1581, 2276, 2461, 2885, 3157 |
| MunI | CAATTG | 2 cut(s) | 897, 2646 |
| Mva1269I | GAATGC | 2 cut(s) | 1266, 1472 |
| MvaI | CCWGG | 5 cut(s) | 1581, 2276, 2461, 2885, 3157 |
| MvnI | CGCG | 4 cut(s) | 755, 940, 1208, 1386 |
| NciI | CCSGG | 2 cut(s) | 1091, 1442 |
| NcoI | CCATGG | 5 cut(s) | 610, 818, 1281, 2359, 2567 |
| NdeI | CATATG | 1 cut(s) | 1893 |
| NmeAIII | GCCGAG | 1 cut(s) | 1204 |
| NmuCI | GTSAC | 9 cut(s) | 284, 340, 526, 922, 949, 1678, 1787, 2335, 2698 |
| NruI | TCGCGA | 1 cut(s) | 755 |
| NsiI | ATGCAT | 1 cut(s) | 1474 |
| PagI | TCATGA | 1 cut(s) | 2223 |
| PauI | GCGCGC | 1 cut(s) | 938 |
| PceI | AGGCCT | 1 cut(s) | 2459 |
| PctI | GAATGC | 2 cut(s) | 1266, 1472 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2057 |
| PfeI | GAWTC | 9 cut(s) | 351, 616, 814, 1225, 1253, 1756, 2188, 2365, 3092 |
| PflFI | GACNNNGTC | 1 cut(s) | 3151 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2720 |
| PfoI | TCCNGGA | 1 cut(s) | 1440 |
| PinAI | ACCGGT | 1 cut(s) | 2738 |
| PkrI | GCNGC | 8 cut(s) | 865, 937, 1207, 1320, 1698, 2614, 2686, 3119 |
| Ple19I | CGATCG | 1 cut(s) | 1325 |
| PleI | GAGTC | 4 cut(s) | 161, 1954, 2668, 2757 |
| PpsI | GAGTC | 4 cut(s) | 161, 1954, 2668, 2757 |
| PpuMI | RGGWCCY | 3 cut(s) | 602, 1087, 2351 |
| PshBI | ATTAAT | 1 cut(s) | 1997 |
| PsiI | TTATAA | 3 cut(s) | 1839, 2433, 2469 |
| Psp124BI | GAGCTC | 1 cut(s) | 2250 |
| Psp5II | RGGWCCY | 3 cut(s) | 602, 1087, 2351 |
| Psp6I | CCWGG | 5 cut(s) | 1579, 2274, 2459, 2883, 3155 |
| PspEI | GGTNACC | 1 cut(s) | 1678 |
| PspFI | CCCAGC | 2 cut(s) | 114, 737 |
| PspGI | CCWGG | 5 cut(s) | 1579, 2274, 2459, 2883, 3155 |
| PspPPI | RGGWCCY | 3 cut(s) | 602, 1087, 2351 |
| PstI | CTGCAG | 1 cut(s) | 2018 |
| PsuI | RGATCY | 2 cut(s) | 2836, 2875 |
| PsyI | GACNNNGTC | 1 cut(s) | 3151 |
| PteI | GCGCGC | 1 cut(s) | 938 |
| PvuI | CGATCG | 1 cut(s) | 1325 |
| PvuII | CAGCTG | 2 cut(s) | 854, 914 |
| RruI | TCGCGA | 1 cut(s) | 755 |
| RsaI | GTAC | 3 cut(s) | 36, 648, 2315 |
| RsaNI | GTAC | 3 cut(s) | 35, 647, 2314 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1532, 2722, 3054 |
| SacI | GAGCTC | 1 cut(s) | 2250 |
| SatI | GCNGC | 8 cut(s) | 864, 936, 1206, 1319, 1697, 2613, 2685, 3118 |
| SchI | GAGTC | 4 cut(s) | 161, 1955, 2668, 2758 |
| ScrFI | CCNGG | 7 cut(s) | 1091, 1442, 1581, 2276, 2461, 2885, 3157 |
| SduI | GDGCHC | 3 cut(s) | 1384, 2250, 3129 |
| SfaNI | GCATC | 9 cut(s) | 183, 1060, 1165, 1459, 1536, 1993, 2660, 2809, 2914 |
| SfcI | CTRYAG | 3 cut(s) | 655, 1036, 2014 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1532, 2722, 3054 |
| SmlI | CTYRAG | 4 cut(s) | 515, 1350, 2327, 2870 |
| SmoI | CTYRAG | 4 cut(s) | 515, 1350, 2327, 2870 |
| SseBI | AGGCCT | 1 cut(s) | 2459 |
| SsiI | CCGC | 3 cut(s) | 801, 1206, 2610 |
| SspI | AATATT | 1 cut(s) | 826 |
| SspMI | CTAG | 7 cut(s) | 65, 345, 1169, 1202, 1652, 2033, 2525 |
| SstI | GAGCTC | 1 cut(s) | 2250 |
| StuI | AGGCCT | 1 cut(s) | 2459 |
| StyD4I | CCNGG | 7 cut(s) | 1089, 1440, 1579, 2274, 2459, 2883, 3155 |
| StyI | CCWWGG | 7 cut(s) | 462, 610, 818, 1281, 1510, 2359, 2567 |
| TaiI | ACGT | 2 cut(s) | 1290, 1971 |
| TaqI | TCGA | 7 cut(s) | 839, 1290, 1710, 2166, 2734, 2919, 2957 |
| TaqII | GACCGA | 1 cut(s) | 1666 |
| TatI | WGTACW | 1 cut(s) | 34 |
| TauI | GCSGC | 1 cut(s) | 1208 |
| TfiI | GAWTC | 9 cut(s) | 351, 616, 814, 1225, 1253, 1756, 2188, 2365, 3092 |
| TseFI | GTSAC | 9 cut(s) | 284, 340, 526, 922, 949, 1678, 1787, 2335, 2698 |
| TseI | GCWGC | 7 cut(s) | 863, 935, 1318, 1696, 2612, 2684, 3117 |
| Tsp45I | GTSAC | 9 cut(s) | 284, 340, 526, 922, 949, 1678, 1787, 2335, 2698 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3151 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2720 |
| VneI | GTGCAC | 2 cut(s) | 1380, 3125 |
| VspI | ATTAAT | 1 cut(s) | 1997 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 426 |
| XapI | RAATTY | 2 cut(s) | 2582, 2639 |
| XbaI | TCTAGA | 1 cut(s) | 1168 |
| XmiI | GTMKAC | 1 cut(s) | 1401 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2057 |
| XspI | CTAG | 7 cut(s) | 65, 345, 1169, 1202, 1652, 2033, 2525 |
| ZraI | GACGTC | 1 cut(s) | 1288 |
| Zsp2I | ATGCAT | 1 cut(s) | 1474 |