Prupe.5G139600_v2.0.a1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0015029
Physical Location & Seq
Reverse (-)
13070890 .. 13072980
2091 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G139600.1

Sequence Viewer

Length: 1593 bp
ATGAAAGCCACCAATGCGAACAACATCACCACCGTAATCAAACGCTGCAAGACCCCAAACCAACTCCTCCGACTCCATGCTCTCACCATCACCAATCCCACTCTCACCAAAACGACTTGTCGTGATATTATCACCTCCAGCATCCTCCACGCCTTCATCTCTCTGATCCCTTCTTCCTCTTCAACCACTTCACTCTGCTATGCCGTCTCTCTCTTCAATCTCATCACAAGCCCATCAACCTTTTGTTTCAATAACATTATTAGAGCCCACACCCTTCTTTCTTCCCCTCTCTCTGCTCTCGGCTTCTTTGCCCGTATGCGCCGGTTTTCTCTCCCCCCGGACTTCCACACCTTCCCTTTTGCTCTCAAGGCCTGTGCCCAACTTGGGTTTTCTTCGTTTTTCATCTCTCAGGCCCTTCACTCGCAGGCCCTCAAGTTCGGTTTCGCTTCCCATTTGTTTGTTTCTAACACCCTCATTCATGTCTACTCGATTTGTCATCACCTGAACCATGCGTGTAAGGTGTTTGATGAAAGTTCTCGCCGGGATGTGGTCTCCTACAACGCCATGCTCGACGCCTTTGTTAAGGCCGGTGAGGTTTCTAGAGCGCGTCAACTGTTTGAAGAAATGCCTGTGCGGGACTCCGTCTCGTGGGGTACCGTTTTAGTTGGGTATGCTCAGATGAATCAGTGCGAAGAAGCGATTCAACTGTTTGATCAGATGCTTGGTTTGCGAGTTATCCCTGATGATATCTGCTTGGTTTCTGCTCTTTCTGCTTGTGCGCAGCTGGGAGATTTGGAACGAGGGAAAAACATTCACGATTACATCAAACGGAACAGGGTTCGACTCAGTTCCTACTTCTTAACAGCGTTAGTGGACTTGTATGCCAAGTGTGGGTGCATTGAGACTGCCCTGGGGATCTTCGAGGCAAGCCCAGATAAGAATGTGTTCACATGGAACGCCATGCTTGTTGGGCTTGCAATGCATGGCCACGGCAAGCTGTCACTGAATTACTTCTGCAGAATGATAGAGGCCGGAGTTAAACCAGATGGGGTGAGCGTCTTAGGGGTTTTAGTGGGCTGTAGCCATGTGGGTTTTGTACATCAAGCCCAGAAGCTTTTCGACGACATGGAAACAGTTTATGGGGTCCCTCGAGAGCTCAAGCATTATGGATGCATGGCTGATCTGCTTGGGAGAGCAGGTTTGATCAAGGAAGCAATGGAGATGATAGACAAGATGCCAATGGGTGGTGATGTTTTTGTGTGGGGTGGGTTGCTAGGAGGGTGTAGGATACATGGTGATGTTGAGATAGCAAAGAAAGCGGCAGAACATGTAATGGAGTTGGACCCTGAAGATGGTGGAGTTTATTCAATCATGGCCAACGTTTATGCAAATGCAGAAAAATGGGATGATGTGGTGAAGATTAGAAAATCCATAAAAGATGCTAAGAGGGTGAAGAAGATCAGTGGTTGTAGTTTAATTAACTTGAATGGAAGCATCCACAAGTTTATTGCAGGGGATAGCTTGCATCCTCAATCAGAAGCAATATATTGGGTTTTGGATGGACTTTGGAAGCATCAATTCGAAGCATGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR

Protein Analysis

531

Amino Acids

58.64

Weight (kDa)

8.21

Isoelectric Point (pI)

39.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015029)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G61800
fragaria_vesca FvH4_5g09900
malus_domestica MD00G1076000.v1.1
prunus_persica Prupe.5G139600_v2.0.a1
pyrus_communis pycom06g11970
rosa_chinensis RchiOBHm_Chr7g0188381
rosa_laevigata RLG00000004697
rosa_multiflora Rmu_co8347981.1_g000001 Rmu_sc0000952.1_g000005
rosa_roxburghii Rroxscaffold_3G00266440
rosa_rugosa Rorug06G0490300
rosa_samantha Rh7AG095000 Rh7BG096500 Rh7CG097000 Rh7CG097100
rosa_wichuraiana Rw7G008190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 780
Acc36I ACCTGC 1 cut(s) 1187
Acc65I GGTACC 1 cut(s) 653
AccB1I GGYRCC 1 cut(s) 653
AccB7I CCANNNNNTGG 1 cut(s) 1244
AccI GTMKAC 1 cut(s) 483
AccII CGCG 1 cut(s) 607
AciI CCGC 2 cut(s) 634, 1319
AclI AACGTT 1 cut(s) 1380
AclWI GGATC 2 cut(s) 160, 923
AcoI YGGCCR 2 cut(s) 985, 1374
AcuI CTGAAG 1 cut(s) 1368
AcyI GRCGYC 1 cut(s) 573
AfaI GTAC 2 cut(s) 655, 1098
AfiI CCNNNNNNNGG 6 cut(s) 384, 547, 648, 891, 1244, 1352
AflIII ACRYGT 1 cut(s) 1327
AgsI TTSAA 7 cut(s) 183, 217, 250, 620, 704, 1368, 1486
AjnI CCWGG 1 cut(s) 909
AluBI AGCT 5 cut(s) 784, 997, 1114, 1156, 1521
AluI AGCT 5 cut(s) 784, 997, 1114, 1156, 1521
Alw21I GWGCWC 1 cut(s) 1158
Alw26I GTCTC 4 cut(s) 211, 556, 649, 896
AlwI GGATC 2 cut(s) 160, 923
Ama87I CYCGRG 1 cut(s) 1149
AoxI GGCC 7 cut(s) 369, 411, 426, 585, 985, 1029, 1374
ApeKI GCWGC 2 cut(s) 45, 781
Asp700I GAANNNNTTC 4 cut(s) 699, 944, 1010, 1115
Asp718I GGTACC 1 cut(s) 653
AspLEI GCGC 3 cut(s) 321, 607, 781
AspS9I GGNCC 4 cut(s) 412, 427, 1144, 1342
AsuC2I CCSGG 2 cut(s) 338, 542
AsuII TTCGAA 1 cut(s) 1581
AvaI CYCGRG 1 cut(s) 1149
AvaII GGWCC 2 cut(s) 1144, 1342
BaeGI GKGCMC 1 cut(s) 379
BalI TGGCCA 2 cut(s) 987, 1376
BanI GGYRCC 1 cut(s) 653
BanII GRGCYC 2 cut(s) 268, 1158
BauI CACGAG 1 cut(s) 646
Bbv12I GWGCWC 1 cut(s) 1158
BbvI GCAGC 2 cut(s) 32, 793
BccI CCATC 5 cut(s) 95, 241, 1040, 1346, 1553
BceAI ACGGC 2 cut(s) 188, 1006
BciT130I CCWGG 1 cut(s) 911
BciVI GTATCC 1 cut(s) 1281
BclI TGATCA 2 cut(s) 712, 1203
BcnI CCSGG 2 cut(s) 338, 542
BcoDI GTCTC 4 cut(s) 211, 556, 649, 896
BfaI CTAG 2 cut(s) 600, 1274
BfmI CTRYAG 2 cut(s) 1015, 1078
BfuAI ACCTGC 1 cut(s) 1187
BfuI GTATCC 1 cut(s) 1281
BisI GCNGC 3 cut(s) 46, 782, 1320
BlsI GCNGC 3 cut(s) 47, 783, 1321
Bme1390I CCNGG 3 cut(s) 338, 542, 911
Bme18I GGWCC 2 cut(s) 1144, 1342
BmeT110I CYCGRG 1 cut(s) 1149
BmgT120I GGNCC 4 cut(s) 412, 427, 1144, 1342
BmiI GGNNCC 4 cut(s) 655, 1145, 1146, 1344
BmrFI CCNGG 3 cut(s) 338, 542, 911
BmsI GCATC 8 cut(s) 150, 708, 1160, 1224, 1429, 1503, 1534, 1582
BpmI CTGGAG 1 cut(s) 121
Bpu14I TTCGAA 1 cut(s) 1581
BpuEI CTTGAG 3 cut(s) 350, 416, 1142
BpuMI CCSGG 2 cut(s) 338, 542
BsaHI GRCGYC 1 cut(s) 573
BsaI GGTCTC 1 cut(s) 556
BsaJI CCNNGG 4 cut(s) 336, 909, 910, 988
BsaXI ACNNNNNCTCC 2 cut(s) 1183, 1213
Bsc4I CCNNNNNNNGG 6 cut(s) 384, 547, 648, 891, 1244, 1352
Bse118I RCCGGY 2 cut(s) 321, 587
Bse3DI GCAATG 2 cut(s) 984, 1221
BseBI CCWGG 1 cut(s) 911
BseDI CCNNGG 4 cut(s) 336, 909, 910, 988
BseGI GGATG 7 cut(s) 141, 550, 1175, 1411, 1494, 1525, 1564
BseLI CCNNNNNNNGG 6 cut(s) 384, 547, 648, 891, 1244, 1352
BseMI GCAATG 2 cut(s) 984, 1221
BseMII CTCAG 3 cut(s) 422, 689, 859
BseRI GAGGAG 1 cut(s) 56
BseSI GKGCMC 1 cut(s) 379
BseXI GCAGC 2 cut(s) 32, 793
BseYI CCCAGC 1 cut(s) 784
Bsh1236I CGCG 1 cut(s) 607
BshFI GGCC 7 cut(s) 371, 413, 428, 587, 987, 1031, 1376
BshNI GGYRCC 1 cut(s) 653
BsiHKAI GWGCWC 1 cut(s) 1158
BsiHKCI CYCGRG 1 cut(s) 1149
BsiSI CCGG 5 cut(s) 322, 338, 541, 588, 1032
BslFI GGGAC 2 cut(s) 650, 1130
BslI CCNNNNNNNGG 6 cut(s) 384, 547, 648, 891, 1244, 1352
BsmAI GTCTC 4 cut(s) 211, 556, 649, 896
BsmBI CGTCTC 2 cut(s) 211, 649
BsmFI GGGAC 2 cut(s) 650, 1130
BsnI GGCC 7 cut(s) 371, 413, 428, 587, 987, 1031, 1376
Bso31I GGTCTC 1 cut(s) 556
BsoBI CYCGRG 1 cut(s) 1149
Bsp119I TTCGAA 1 cut(s) 1581
Bsp1286I GDGCHC 3 cut(s) 268, 379, 1158
Bsp1407I TGTACA 1 cut(s) 1096
Bsp143I GATC 6 cut(s) 165, 712, 915, 1180, 1203, 1458
BspACI CCGC 2 cut(s) 634, 1319
BspANI GGCC 7 cut(s) 371, 413, 428, 587, 987, 1031, 1376
BspCNI CTCAG 3 cut(s) 421, 688, 858
BspFNI CGCG 1 cut(s) 607
BspLI GGNNCC 4 cut(s) 655, 1145, 1146, 1344
BspMAI CTGCAG 1 cut(s) 1019
BspMI ACCTGC 1 cut(s) 1187
BspPI GGATC 2 cut(s) 160, 923
BspT104I TTCGAA 1 cut(s) 1581
BspT107I GGYRCC 1 cut(s) 653
BspTNI GGTCTC 1 cut(s) 556
BsrDI GCAATG 2 cut(s) 984, 1221
BsrFI RCCGGY 2 cut(s) 321, 587
BsrGI TGTACA 1 cut(s) 1096
BssAI RCCGGY 2 cut(s) 321, 587
BssECI CCNNGG 4 cut(s) 336, 909, 910, 988
BssMI GATC 6 cut(s) 165, 712, 915, 1180, 1203, 1458
BssNI GRCGYC 1 cut(s) 573
BssSI CACGAG 1 cut(s) 646
Bst2BI CACGAG 1 cut(s) 646
Bst2UI CCWGG 1 cut(s) 911
Bst4CI ACNGT 5 cut(s) 34, 615, 658, 708, 1135
Bst6I CTCTTC 2 cut(s) 184, 218
BstACI GRCGYC 1 cut(s) 573
BstAUI TGTACA 1 cut(s) 1096
BstBI TTCGAA 1 cut(s) 1581
BstC8I GCNNGC 6 cut(s) 426, 928, 975, 995, 1523, 1588
BstDEI CTNAG 5 cut(s) 408, 675, 845, 1060, 1443
BstDSI CCRYGG 1 cut(s) 988
BstF5I GGATG 7 cut(s) 141, 550, 1175, 1411, 1494, 1525, 1564
BstFNI CGCG 1 cut(s) 607
BstHHI GCGC 3 cut(s) 321, 607, 781
BstKTI GATC 6 cut(s) 168, 715, 918, 1183, 1206, 1461
BstMAI GTCTC 4 cut(s) 211, 556, 649, 896
BstMBI GATC 6 cut(s) 165, 712, 915, 1180, 1203, 1458
BstMWI GCNNNNNNNGC 7 cut(s) 14, 368, 727, 770, 970, 979, 1316
BstNI CCWGG 1 cut(s) 911
BstNSI RCATGY 2 cut(s) 1331, 1590
BstSCI CCNGG 3 cut(s) 336, 540, 909
BstSFI CTRYAG 2 cut(s) 1015, 1078
BstSLI GKGCMC 1 cut(s) 379
BstUI CGCG 1 cut(s) 607
BstV1I GCAGC 2 cut(s) 32, 793
BstX2I RGATCY 1 cut(s) 915
BstYI RGATCY 1 cut(s) 915
BsuI GTATCC 1 cut(s) 1281
BsuRI GGCC 7 cut(s) 371, 413, 428, 587, 987, 1031, 1376
BtgI CCRYGG 1 cut(s) 988
BtsCI GGATG 7 cut(s) 141, 550, 1175, 1411, 1494, 1525, 1564
BtsIMutI CAGTG 3 cut(s) 692, 1001, 1468
BveI ACCTGC 1 cut(s) 1187
Cac8I GCNNGC 6 cut(s) 426, 928, 975, 995, 1523, 1588
CfoI GCGC 3 cut(s) 321, 607, 781
Cfr10I RCCGGY 2 cut(s) 321, 587
Cfr13I GGNCC 4 cut(s) 412, 427, 1144, 1342
CseI GACGC 3 cut(s) 581, 596, 1045
Csp6I GTAC 2 cut(s) 654, 1097
CviQI GTAC 2 cut(s) 654, 1097
DdeI CTNAG 5 cut(s) 408, 675, 845, 1060, 1443
DpnI GATC 6 cut(s) 167, 714, 917, 1182, 1205, 1460
DpnII GATC 6 cut(s) 165, 712, 915, 1180, 1203, 1458
EaeI YGGCCR 2 cut(s) 985, 1374
Eam1104I CTCTTC 2 cut(s) 184, 218
EarI CTCTTC 2 cut(s) 184, 218
Ecl136II GAGCTC 1 cut(s) 1156
Eco147I AGGCCT 1 cut(s) 371
Eco24I GRGCYC 2 cut(s) 268, 1158
Eco31I GGTCTC 1 cut(s) 556
Eco32I GATATC 1 cut(s) 748
Eco47I GGWCC 2 cut(s) 1144, 1342
Eco53kI GAGCTC 1 cut(s) 1156
Eco57I CTGAAG 1 cut(s) 1368
Eco88I CYCGRG 1 cut(s) 1149
EcoICRI GAGCTC 1 cut(s) 1156
EcoO109I RGGNCCY 3 cut(s) 412, 427, 1144
EcoRII CCWGG 1 cut(s) 909
EcoRV GATATC 1 cut(s) 748
EcoT22I ATGCAT 2 cut(s) 984, 1175
EcoT38I GRGCYC 2 cut(s) 268, 1158
Esp3I CGTCTC 2 cut(s) 211, 649
FaqI GGGAC 2 cut(s) 650, 1130
FauI CCCGC 1 cut(s) 627
FbaI TGATCA 2 cut(s) 712, 1203
FblI GTMKAC 1 cut(s) 483
Fnu4HI GCNGC 3 cut(s) 46, 782, 1320
FokI GGATG 7 cut(s) 128, 557, 1182, 1418, 1481, 1512, 1571
FriOI GRGCYC 2 cut(s) 268, 1158
Fsp4HI GCNGC 3 cut(s) 46, 782, 1320
FspBI CTAG 2 cut(s) 600, 1274
FspI TGCGCA 1 cut(s) 780
GlaI GCGC 3 cut(s) 320, 606, 780
GluI GCNGC 3 cut(s) 46, 782, 1320
GsaI CCCAGC 1 cut(s) 788
GsuI CTGGAG 1 cut(s) 121
HaeIII GGCC 7 cut(s) 371, 413, 428, 587, 987, 1031, 1376
HapII CCGG 5 cut(s) 322, 338, 541, 588, 1032
HgaI GACGC 3 cut(s) 581, 596, 1045
HhaI GCGC 3 cut(s) 321, 607, 781
Hin1I GRCGYC 1 cut(s) 573
Hin6I GCGC 3 cut(s) 319, 605, 779
HinP1I GCGC 3 cut(s) 319, 605, 779
HincII GTYRAC 1 cut(s) 611
HindII GTYRAC 1 cut(s) 611
HindIII AAGCTT 1 cut(s) 1112
HinfI GANTC 5 cut(s) 72, 638, 682, 700, 843
HpaII CCGG 5 cut(s) 322, 338, 541, 588, 1032
Hpy166II GTNNAC 4 cut(s) 484, 611, 874, 948
Hpy188I TCNGA 5 cut(s) 71, 165, 678, 717, 1537
Hpy188III TCNNGA 4 cut(s) 122, 600, 815, 1151
Hpy8I GTNNAC 4 cut(s) 484, 611, 874, 948
Hpy99I CGWCG 2 cut(s) 575, 1124
HpyAV CCTTC 5 cut(s) 163, 180, 284, 361, 425
HpyCH4III ACNGT 5 cut(s) 34, 615, 658, 708, 1135
HpyCH4IV ACGT 1 cut(s) 1380
HpyF10VI GCNNNNNNNGC 7 cut(s) 14, 368, 727, 770, 970, 979, 1316
HpyF3I CTNAG 5 cut(s) 408, 675, 845, 1060, 1443
HpySE526I ACGT 1 cut(s) 1380
Hsp92I GRCGYC 1 cut(s) 573
HspAI GCGC 3 cut(s) 319, 605, 779
KflI GGGWCCC 1 cut(s) 1144
KpnI GGTACC 1 cut(s) 657
Ksp22I TGATCA 2 cut(s) 712, 1203
Kzo9I GATC 6 cut(s) 165, 712, 915, 1180, 1203, 1458
Lsp1109I GCAGC 2 cut(s) 32, 793
LweI GCATC 8 cut(s) 150, 708, 1160, 1224, 1429, 1503, 1534, 1582
MaeI CTAG 2 cut(s) 600, 1274
MaeII ACGT 1 cut(s) 1380
MaeIII GTNAC 1 cut(s) 999
MalI GATC 6 cut(s) 167, 714, 917, 1182, 1205, 1460
MboI GATC 6 cut(s) 165, 712, 915, 1180, 1203, 1458
MflI RGATCY 1 cut(s) 915
MhlI GDGCHC 3 cut(s) 268, 379, 1158
MlsI TGGCCA 2 cut(s) 987, 1376
MluCI AATT 3 cut(s) 1006, 1476, 1577
MluNI TGGCCA 2 cut(s) 987, 1376
MlyI GAGTC 3 cut(s) 66, 632, 837
MmeI TCCRAC 2 cut(s) 94, 1320
Mox20I TGGCCA 2 cut(s) 987, 1376
Mph1103I ATGCAT 2 cut(s) 984, 1175
MroXI GAANNNNTTC 4 cut(s) 699, 944, 1010, 1115
MscI TGGCCA 2 cut(s) 987, 1376
MseI TTAA 5 cut(s) 582, 860, 1038, 1475, 1479
MslI CAYNNNNRTG 1 cut(s) 1296
Msp20I TGGCCA 2 cut(s) 987, 1376
MspA1I CMGCKG 1 cut(s) 784
MspI CCGG 5 cut(s) 322, 338, 541, 588, 1032
MspR9I CCNGG 3 cut(s) 338, 542, 911
MvaI CCWGG 1 cut(s) 911
MvnI CGCG 1 cut(s) 607
MwoI GCNNNNNNNGC 7 cut(s) 14, 368, 727, 770, 970, 979, 1316
NciI CCSGG 2 cut(s) 338, 542
NdeII GATC 6 cut(s) 165, 712, 915, 1180, 1203, 1458
NlaIV GGNNCC 4 cut(s) 655, 1145, 1146, 1344
NmeAIII GCCGAG 1 cut(s) 279
NmuCI GTSAC 1 cut(s) 999
NsbI TGCGCA 1 cut(s) 780
NsiI ATGCAT 2 cut(s) 984, 1175
NspI RCATGY 2 cut(s) 1331, 1590
NspV TTCGAA 1 cut(s) 1581
PacI TTAATTAA 1 cut(s) 1479
PaeI GCATGC 1 cut(s) 1590
PaeR7I CTCGAG 1 cut(s) 1149
PasI CCCWGGG 1 cut(s) 910
PceI AGGCCT 1 cut(s) 371
PciI ACATGT 1 cut(s) 1327
PcsI WCGNNNNNNNCGW 1 cut(s) 567
PdmI GAANNNNTTC 4 cut(s) 699, 944, 1010, 1115
PfeI GAWTC 2 cut(s) 682, 700
PflFI GACNNNGTC 1 cut(s) 641
PflMI CCANNNNNTGG 1 cut(s) 1244
PkrI GCNGC 3 cut(s) 47, 783, 1321
PleI GAGTC 3 cut(s) 66, 632, 837
PpsI GAGTC 3 cut(s) 66, 632, 837
PpuMI RGGWCCY 1 cut(s) 1144
PscI ACATGT 1 cut(s) 1327
Psp124BI GAGCTC 1 cut(s) 1158
Psp1406I AACGTT 1 cut(s) 1380
Psp5II RGGWCCY 1 cut(s) 1144
Psp6I CCWGG 1 cut(s) 909
PspFI CCCAGC 1 cut(s) 784
PspGI CCWGG 1 cut(s) 909
PspN4I GGNNCC 4 cut(s) 655, 1145, 1146, 1344
PspPI GGNCC 4 cut(s) 412, 427, 1144, 1342
PspPPI RGGWCCY 1 cut(s) 1144
PstI CTGCAG 1 cut(s) 1019
PsuI RGATCY 1 cut(s) 915
PsyI GACNNNGTC 1 cut(s) 641
PvuII CAGCTG 1 cut(s) 784
RsaI GTAC 2 cut(s) 655, 1098
RsaNI GTAC 2 cut(s) 654, 1097
RseI CAYNNNNRTG 1 cut(s) 1296
SacI GAGCTC 1 cut(s) 1158
SaqAI TTAA 5 cut(s) 582, 860, 1038, 1475, 1479
SatI GCNGC 3 cut(s) 46, 782, 1320
Sau3AI GATC 6 cut(s) 165, 712, 915, 1180, 1203, 1458
Sau96I GGNCC 4 cut(s) 412, 427, 1144, 1342
SchI GAGTC 3 cut(s) 66, 632, 837
ScrFI CCNGG 3 cut(s) 338, 542, 911
SduI GDGCHC 3 cut(s) 268, 379, 1158
SfaNI GCATC 8 cut(s) 150, 708, 1160, 1224, 1429, 1503, 1534, 1582
SfcI CTRYAG 2 cut(s) 1015, 1078
Sfr274I CTCGAG 1 cut(s) 1149
SfuI TTCGAA 1 cut(s) 1581
SinI GGWCC 2 cut(s) 1144, 1342
SlaI CTCGAG 1 cut(s) 1149
SmiMI CAYNNNNRTG 1 cut(s) 1296
SmlI CTYRAG 4 cut(s) 365, 431, 1149, 1157
SmoI CTYRAG 4 cut(s) 365, 431, 1149, 1157
SphI GCATGC 1 cut(s) 1590
Sse9I AATT 3 cut(s) 1006, 1476, 1577
SseBI AGGCCT 1 cut(s) 371
SsiI CCGC 2 cut(s) 634, 1319
SspMI CTAG 2 cut(s) 600, 1274
SstI GAGCTC 1 cut(s) 1158
StuI AGGCCT 1 cut(s) 371
StyD4I CCNGG 3 cut(s) 336, 540, 909
TaaI ACNGT 5 cut(s) 34, 615, 658, 708, 1135
TaiI ACGT 1 cut(s) 1383
TaqI TCGA 7 cut(s) 488, 570, 841, 921, 1119, 1150, 1581
TasI AATT 3 cut(s) 1006, 1476, 1577
TatI WGTACW 1 cut(s) 1096
TauI GCSGC 1 cut(s) 1322
TfiI GAWTC 2 cut(s) 682, 700
Tru1I TTAA 5 cut(s) 582, 860, 1038, 1475, 1479
Tru9I TTAA 5 cut(s) 582, 860, 1038, 1475, 1479
TscAI CASTG 3 cut(s) 692, 1008, 1468
TseFI GTSAC 1 cut(s) 999
TseI GCWGC 2 cut(s) 45, 781
Tsp45I GTSAC 1 cut(s) 999
TspDTI ATGAA 6 cut(s) 17, 145, 391, 467, 543, 695
TspGWI ACGGA 2 cut(s) 631, 844
TspRI CASTG 3 cut(s) 692, 1008, 1468
Tth111I GACNNNGTC 1 cut(s) 641
Van91I CCANNNNNTGG 1 cut(s) 1244
VpaK11BI GGWCC 2 cut(s) 1144, 1342
XbaI TCTAGA 1 cut(s) 599
XceI RCATGY 2 cut(s) 1331, 1590
XhoI CTCGAG 1 cut(s) 1149
XmiI GTMKAC 1 cut(s) 483
XmnI GAANNNNTTC 4 cut(s) 699, 944, 1010, 1115
XspI CTAG 2 cut(s) 600, 1274
Zsp2I ATGCAT 2 cut(s) 984, 1175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.