Rroxscaffold_3G00266440

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0015029
Physical Location & Seq
Forward (+)
59706458 .. 59708908
2451 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00266440.1

Sequence Viewer

Length: 1770 bp
ATGCGCCGCTTTTCGCTCCCCCCAGACTTCCACACCTTCCCTTTCGCCCTCAAGGCCTGCGCCCAGCTTGGCTCTTCTTCGTTTTCACTCACCCAGACCATTCATTCTCAGGCGCTCAAGTTCGGTTTCGCTTCACACTCGTTTGTCACCAACACCCTCATTCATGTCTACTCAGCTTGCCAGCGTCTGGACCATGCACGCAAGGTGTTCGACGAAAGTTCCCACAGGGATGTGGTCTCGTATAATGCGATGCTGGACGCATTTGTTAAGGGAGGTGAGATTTGTAGAGCACGGCAAGTGTTTGATGAGATGGCAGACCGGGACTCTGTTTCGTGGGGGACTGTTTTAGCTGGGTATGCACAGACGAATCGGTGCGAGGAAGCGATTGAGCTGTTTGGTGAGATGATTGAGTCGAACATTGGGCCTGATGATATCTGCTTGGTCTCTGCTCTCTCTGCTTGTGCTCAGCTGGGTGATTTGGAGCGAGGGAGAAGTATTCATGACTACATCAAACGGAACAGGATTAGACTGAGTTCATTCTTTTTGACAGCATTGGTGGACTTGTATGCGAAATGCGGGTGCATCGAGACTGCCATTAAGATTTTCGAGTCGAGCTATGATAAGAATGTGTTCACTTGGAATGCCATGCTTGTTGGGCTTGCAATGCACGGCCACGCCCATCTCTCACTGGAGTACTTCTCCAGAATGATAGAGGCTGGAGTTAAACCTGATGGGGTTAGCTTCTTAGGGGTTTTAGTGGGTTGCAGTCATGGAGGTAGAGTAGATGAAGCCCGAAAGCTTTTCGATGAAATGGAATTAGTTTATGGGGTCCCCAGAGAGCTCAAGCATTATGGGTGCATGGCTGATCTGCTTGGTAGAGCTGGGTTGATCAAGGAAGCAATGGAGATGATAGAGAAGATGCCAATGGGTGGTGATGTGTTTGTGTGGGGTGGTTTACTTGGAGGTTGCAAAATACATGGTGATGTTGAGGGTGCAAAGAAAGCAGCAGAGCATGTGATGGAGTTGGACCCTGAAGATGGTGGTGTATATTCAATCATGGCTAGCGTTTATGCCAATGCAGAGAAATGGGATGATGTGGTAAAAACCAGAAAGTCCATAAGTTCTAACAAGAGGGTCAAGAAGAACTCTGGTTGTAGTTTGATTAGGTTGAATGGAGTCACCCATGAGTTTCTTGCAGGGGATAGCTTCCATCCTCGAACAGAAGCAATTTATTTGAATCAGTGGCAACGATTGTTGAGTGGGTTAAGAGGGTATGCAACCTCAACCTTACCAAAGATGAAAGCGTATACCCCAACTGCTAATTTCGCCGAGCAACAGAGCAGTAAGAAGCCAAGGGGAGATTTCGTGCCCGTGTATGTAGCTGTTGGGATGATAGCACTTTCAGTGGGGCTGGGACTCCACACTGCCAAGCAACAGCTCTTCCACAACCCCCAAGTCTTTGTGAAGAAGGAGCGGCGGGAGATGCTGCCGGAGGTGGTGGAGCCCGACCGTGTGGTGGAGGACGCTGATAAGTTTTTTAACAAATCCTTTTTCAGGAAGGTGGCTCATGTTCAGGAGTTTGACAATCCCATAACATCTGATCCGACTCATGGAGATGTTTATGCTCAGCGGCCACGTGCTGTGACTCTCAAAGAGGCCGGAGTAGATCCTAAAGCGTTCACCGAGGGACTAGATCCTCGAATCCGTGCGAGACTTGGAGTAGATCCGAAAAAGGTCGTCGAAGAAGATACTAAAGCAGCAGCAGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR

Protein Analysis

589

Amino Acids

65.36

Weight (kDa)

6.86

Isoelectric Point (pI)

34.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 108 - 155 2.3e-07 PPR repeat family
PPR PF01535 110 - 140 7.6e-07 PPR repeat
PPR_2 PF13041 208 - 256 7.3e-06 PPR repeat family
E_motif PF20431 326 - 388 7.6e-12 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015029)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G61800
fragaria_vesca FvH4_5g09900
malus_domestica MD00G1076000.v1.1
prunus_persica Prupe.5G139600_v2.0.a1
pyrus_communis pycom06g11970
rosa_chinensis RchiOBHm_Chr7g0188381
rosa_laevigata RLG00000004697
rosa_multiflora Rmu_co8347981.1_g000001 Rmu_sc0000952.1_g000005
rosa_roxburghii Rroxscaffold_3G00266440
rosa_rugosa Rorug06G0490300
rosa_samantha Rh7AG095000 Rh7BG096500 Rh7CG097000 Rh7CG097100
rosa_wichuraiana Rw7G008190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 187, 929
AccBSI CCGCTC 1 cut(s) 1474
AccI GTMKAC 2 cut(s) 168, 1307
AciI CCGC 5 cut(s) 7, 576, 1474, 1477, 1630
AclWI GGATC 4 cut(s) 1595, 1661, 1688, 1718
AcoI YGGCCR 2 cut(s) 670, 1631
AcuI CTGAAG 1 cut(s) 1053
AcvI CACGTG 1 cut(s) 1637
AfaI GTAC 1 cut(s) 695
AfiI CCNNNNNNNGG 6 cut(s) 187, 929, 1037, 1516, 1554, 1610
AgsI TTSAA 3 cut(s) 1053, 1171, 1237
Alw21I GWGCWC 3 cut(s) 292, 466, 843
Alw26I GTCTC 4 cut(s) 241, 448, 581, 1705
AlwI GGATC 4 cut(s) 1595, 1661, 1688, 1718
AlwNI CAGNNNCTG 1 cut(s) 187
AoxI GGCC 5 cut(s) 54, 422, 670, 1631, 1656
ApeKI GCWGC 5 cut(s) 1004, 1486, 1757, 1760, 1763
Asp700I GAANNNNTTC 1 cut(s) 629
AspLEI GCGC 3 cut(s) 6, 62, 115
AspS9I GGNCC 4 cut(s) 190, 422, 829, 1027
AsuC2I CCSGG 1 cut(s) 320
AsuHPI GGTGA 9 cut(s) 82, 139, 287, 410, 485, 944, 992, 1171, 1672
AsuNHI GCTAGC 1 cut(s) 1061
AvaII GGWCC 3 cut(s) 190, 829, 1027
BaeGI GKGCMC 1 cut(s) 1371
BanII GRGCYC 2 cut(s) 843, 1506
BbrPI CACGTG 1 cut(s) 1637
Bbv12I GWGCWC 3 cut(s) 292, 466, 843
BbvI GCAGC 2 cut(s) 1016, 1473
BccI CCATC 6 cut(s) 304, 687, 725, 1012, 1031, 1218
BceAI ACGGC 2 cut(s) 308, 685
BcgI CGANNNNNNTGC 2 cut(s) 190, 224
BclI TGATCA 1 cut(s) 888
BcnI CCSGG 1 cut(s) 320
BcoDI GTCTC 4 cut(s) 241, 448, 581, 1705
BfaI CTAG 2 cut(s) 1062, 1691
BfoI RGCGCY 1 cut(s) 116
BglI GCCNNNNNGGC 1 cut(s) 53
BisI GCNGC 8 cut(s) 7, 1005, 1475, 1487, 1631, 1758, 1761, 1764
BlpI GCTNAGC 2 cut(s) 465, 1626
BlsI GCNGC 8 cut(s) 8, 1006, 1476, 1488, 1632, 1759, 1762, 1765
BmcAI AGTACT 1 cut(s) 695
Bme1390I CCNGG 1 cut(s) 320
Bme18I GGWCC 3 cut(s) 190, 829, 1027
BmgT120I GGNCC 4 cut(s) 190, 422, 829, 1027
BmiI GGNNCC 4 cut(s) 830, 831, 1029, 1503
BmrFI CCNGG 1 cut(s) 320
BmsI GCATC 4 cut(s) 240, 591, 909, 1473
BmtI GCTAGC 1 cut(s) 1065
BplI GAGNNNNNCTC 2 cut(s) 683, 715
BpmI CTGGAG 3 cut(s) 685, 710, 738
Bpu1102I GCTNAGC 2 cut(s) 465, 1626
BpuEI CTTGAG 3 cut(s) 35, 101, 827
BpuMI CCSGG 1 cut(s) 320
BsaAI YACGTR 1 cut(s) 1637
BsaI GGTCTC 2 cut(s) 241, 448
BsaJI CCNNGG 2 cut(s) 1352, 1683
BsaXI ACNNNNNCTCC 4 cut(s) 765, 795, 1350, 1380
Bsc4I CCNNNNNNNGG 6 cut(s) 187, 929, 1037, 1516, 1554, 1610
Bse1I ACTGG 1 cut(s) 693
Bse3DI GCAATG 2 cut(s) 669, 906
BseDI CCNNGG 2 cut(s) 1352, 1683
BseGI GGATG 4 cut(s) 235, 1096, 1210, 1395
BseLI CCNNNNNNNGG 6 cut(s) 187, 929, 1037, 1516, 1554, 1610
BseMI GCAATG 2 cut(s) 669, 906
BseMII CTCAG 5 cut(s) 122, 186, 479, 521, 1640
BseNI ACTGG 1 cut(s) 693
BseSI GKGCMC 1 cut(s) 1371
BseXI GCAGC 2 cut(s) 1016, 1473
BseYI CCCAGC 5 cut(s) 63, 350, 469, 881, 1411
Bsh1285I CGRYCG 1 cut(s) 1510
BshFI GGCC 5 cut(s) 56, 424, 672, 1633, 1658
BsiEI CGRYCG 1 cut(s) 1510
BsiHKAI GWGCWC 3 cut(s) 292, 466, 843
BsiSI CCGG 3 cut(s) 319, 1490, 1659
BslFI GGGAC 5 cut(s) 335, 352, 815, 1428, 1701
BslI CCNNNNNNNGG 6 cut(s) 187, 929, 1037, 1516, 1554, 1610
BsmAI GTCTC 4 cut(s) 241, 448, 581, 1705
BsmFI GGGAC 5 cut(s) 335, 352, 815, 1428, 1701
BsmI GAATGC 1 cut(s) 646
BsnI GGCC 5 cut(s) 56, 424, 672, 1633, 1658
Bso31I GGTCTC 2 cut(s) 241, 448
Bsp1286I GDGCHC 5 cut(s) 292, 466, 843, 1371, 1506
Bsp143I GATC 6 cut(s) 865, 888, 1600, 1666, 1693, 1723
Bsp1720I GCTNAGC 2 cut(s) 465, 1626
BspACI CCGC 5 cut(s) 7, 576, 1474, 1477, 1630
BspANI GGCC 5 cut(s) 56, 424, 672, 1633, 1658
BspCNI CTCAG 5 cut(s) 121, 185, 478, 522, 1639
BspHI TCATGA 1 cut(s) 499
BspLI GGNNCC 4 cut(s) 830, 831, 1029, 1503
BspOI GCTAGC 1 cut(s) 1065
BspPI GGATC 4 cut(s) 1595, 1661, 1688, 1718
BspQI GCTCTTC 2 cut(s) 79, 1445
BspTNI GGTCTC 2 cut(s) 241, 448
BsrBI CCGCTC 1 cut(s) 1474
BsrDI GCAATG 2 cut(s) 669, 906
BsrI ACTGG 1 cut(s) 693
BssECI CCNNGG 2 cut(s) 1352, 1683
BssMI GATC 6 cut(s) 865, 888, 1600, 1666, 1693, 1723
BssNAI GTATAC 1 cut(s) 1308
BssT1I CCWWGG 1 cut(s) 1352
Bst1107I GTATAC 1 cut(s) 1308
Bst4CI ACNGT 2 cut(s) 343, 1511
Bst6I CTCTTC 2 cut(s) 79, 1445
BstBAI YACGTR 1 cut(s) 1637
BstC8I GCNNGC 6 cut(s) 58, 178, 182, 199, 660, 1063
BstDEI CTNAG 6 cut(s) 108, 172, 465, 530, 745, 1626
BstENI CCTNNNNNAGG 1 cut(s) 1552
BstF5I GGATG 4 cut(s) 235, 1096, 1210, 1395
BstH2I RGCGCY 1 cut(s) 116
BstHHI GCGC 3 cut(s) 6, 62, 115
BstKTI GATC 6 cut(s) 868, 891, 1603, 1669, 1696, 1726
BstMAI GTCTC 4 cut(s) 241, 448, 581, 1705
BstMBI GATC 6 cut(s) 865, 888, 1600, 1666, 1693, 1723
BstMCI CGRYCG 1 cut(s) 1510
BstMWI GCNNNNNNNGC 9 cut(s) 53, 356, 455, 655, 664, 1001, 1325, 1483, 1763
BstNSI RCATGY 1 cut(s) 1016
BstSCI CCNGG 1 cut(s) 318
BstSLI GKGCMC 1 cut(s) 1371
BstV1I GCAGC 2 cut(s) 1016, 1473
BstX2I RGATCY 3 cut(s) 1666, 1693, 1723
BstYI RGATCY 3 cut(s) 1666, 1693, 1723
BstZ17I GTATAC 1 cut(s) 1308
BsuRI GGCC 5 cut(s) 56, 424, 672, 1633, 1658
BtgZI GCGATG 1 cut(s) 263
BtsCI GGATG 4 cut(s) 235, 1096, 1210, 1395
BtsI GCAGTG 1 cut(s) 1422
BtsIMutI CAGTG 4 cut(s) 686, 1247, 1410, 1422
Cac8I GCNNGC 6 cut(s) 58, 178, 182, 199, 660, 1063
CaiI CAGNNNCTG 1 cut(s) 187
CciI TCATGA 1 cut(s) 499
CfoI GCGC 3 cut(s) 6, 62, 115
Cfr13I GGNCC 4 cut(s) 190, 422, 829, 1027
CseI GACGC 3 cut(s) 173, 266, 1532
Csp6I GTAC 1 cut(s) 694
CviQI GTAC 1 cut(s) 694
DdeI CTNAG 6 cut(s) 108, 172, 465, 530, 745, 1626
DpnI GATC 6 cut(s) 867, 890, 1602, 1668, 1695, 1725
DpnII GATC 6 cut(s) 865, 888, 1600, 1666, 1693, 1723
EaeI YGGCCR 2 cut(s) 670, 1631
Eam1104I CTCTTC 2 cut(s) 79, 1445
EarI CTCTTC 2 cut(s) 79, 1445
Ecl136II GAGCTC 1 cut(s) 841
Eco130I CCWWGG 1 cut(s) 1352
Eco147I AGGCCT 1 cut(s) 56
Eco24I GRGCYC 2 cut(s) 843, 1506
Eco31I GGTCTC 2 cut(s) 241, 448
Eco32I GATATC 1 cut(s) 433
Eco47I GGWCC 3 cut(s) 190, 829, 1027
Eco53kI GAGCTC 1 cut(s) 841
Eco57I CTGAAG 1 cut(s) 1053
Eco72I CACGTG 1 cut(s) 1637
EcoICRI GAGCTC 1 cut(s) 841
EcoNI CCTNNNNNAGG 1 cut(s) 1552
EcoO109I RGGNCCY 1 cut(s) 829
EcoRV GATATC 1 cut(s) 433
EcoT14I CCWWGG 1 cut(s) 1352
EcoT38I GRGCYC 2 cut(s) 843, 1506
ErhI CCWWGG 1 cut(s) 1352
FaqI GGGAC 5 cut(s) 335, 352, 815, 1428, 1701
FauI CCCGC 2 cut(s) 569, 1470
FbaI TGATCA 1 cut(s) 888
FblI GTMKAC 2 cut(s) 168, 1307
Fnu4HI GCNGC 8 cut(s) 7, 1005, 1475, 1487, 1631, 1758, 1761, 1764
FokI GGATG 4 cut(s) 242, 1103, 1197, 1402
FriOI GRGCYC 2 cut(s) 843, 1506
Fsp4HI GCNGC 8 cut(s) 7, 1005, 1475, 1487, 1631, 1758, 1761, 1764
FspBI CTAG 2 cut(s) 1062, 1691
GlaI GCGC 3 cut(s) 5, 61, 114
GluI GCNGC 8 cut(s) 7, 1005, 1475, 1487, 1631, 1758, 1761, 1764
GsaI CCCAGC 5 cut(s) 67, 354, 473, 885, 1415
GsuI CTGGAG 3 cut(s) 685, 710, 738
HaeII RGCGCY 1 cut(s) 116
HaeIII GGCC 5 cut(s) 56, 424, 672, 1633, 1658
HapII CCGG 3 cut(s) 319, 1490, 1659
HgaI GACGC 3 cut(s) 173, 266, 1532
HhaI GCGC 3 cut(s) 6, 62, 115
Hin6I GCGC 3 cut(s) 4, 60, 113
HinP1I GCGC 3 cut(s) 4, 60, 113
HindIII AAGCTT 1 cut(s) 797
HpaII CCGG 3 cut(s) 319, 1490, 1659
HphI GGTGA 9 cut(s) 82, 139, 287, 410, 485, 944, 992, 1171, 1672
Hpy166II GTNNAC 6 cut(s) 169, 559, 633, 956, 1308, 1680
Hpy188I TCNGA 3 cut(s) 1600, 1605, 1728
Hpy188III TCNNGA 7 cut(s) 188, 500, 586, 702, 1138, 1555, 1574
Hpy8I GTNNAC 6 cut(s) 169, 559, 633, 956, 1308, 1680
Hpy99I CGWCG 2 cut(s) 215, 1742
HpyAV CCTTC 3 cut(s) 46, 1462, 1552
HpyCH4III ACNGT 2 cut(s) 343, 1511
HpyCH4IV ACGT 1 cut(s) 1636
HpyF10VI GCNNNNNNNGC 9 cut(s) 53, 356, 455, 655, 664, 1001, 1325, 1483, 1763
HpyF3I CTNAG 6 cut(s) 108, 172, 465, 530, 745, 1626
HpySE526I ACGT 1 cut(s) 1636
HspAI GCGC 3 cut(s) 4, 60, 113
KflI GGGWCCC 1 cut(s) 829
Ksp22I TGATCA 1 cut(s) 888
Kzo9I GATC 6 cut(s) 865, 888, 1600, 1666, 1693, 1723
LguI GCTCTTC 2 cut(s) 79, 1445
LmnI GCTCC 4 cut(s) 21, 481, 1471, 1501
Lsp1109I GCAGC 2 cut(s) 1016, 1473
LweI GCATC 4 cut(s) 240, 591, 909, 1473
MaeI CTAG 2 cut(s) 1062, 1691
MaeII ACGT 1 cut(s) 1636
MaeIII GTNAC 3 cut(s) 145, 1177, 1642
MalI GATC 6 cut(s) 867, 890, 1602, 1668, 1695, 1725
MbiI CCGCTC 1 cut(s) 1474
MboI GATC 6 cut(s) 865, 888, 1600, 1666, 1693, 1723
MboII GAAGA 9 cut(s) 66, 69, 928, 1046, 1153, 1432, 1477, 1754, 1757
MflI RGATCY 3 cut(s) 1666, 1693, 1723
MhlI GDGCHC 5 cut(s) 292, 466, 843, 1371, 1506
MluCI AATT 3 cut(s) 815, 1227, 1321
MlyI GAGTC 7 cut(s) 317, 419, 617, 1185, 1410, 1600, 1639
MmeI TCCRAC 2 cut(s) 1005, 1628
MroXI GAANNNNTTC 1 cut(s) 629
MseI TTAA 5 cut(s) 267, 597, 723, 1265, 1539
MslI CAYNNNNRTG 3 cut(s) 228, 981, 1614
MspA1I CMGCKG 2 cut(s) 469, 1630
MspI CCGG 3 cut(s) 319, 1490, 1659
MspR9I CCNGG 1 cut(s) 320
Mva1269I GAATGC 1 cut(s) 646
MwoI GCNNNNNNNGC 9 cut(s) 53, 356, 455, 655, 664, 1001, 1325, 1483, 1763
NciI CCSGG 1 cut(s) 320
NdeII GATC 6 cut(s) 865, 888, 1600, 1666, 1693, 1723
NheI GCTAGC 1 cut(s) 1061
NlaIV GGNNCC 4 cut(s) 830, 831, 1029, 1503
NmeAIII GCCGAG 1 cut(s) 1354
NmuCI GTSAC 3 cut(s) 145, 1177, 1642
NspI RCATGY 1 cut(s) 1016
PagI TCATGA 1 cut(s) 499
PceI AGGCCT 1 cut(s) 56
PciSI GCTCTTC 2 cut(s) 79, 1445
PcsI WCGNNNNNNNCGW 1 cut(s) 245
PctI GAATGC 1 cut(s) 646
PdmI GAANNNNTTC 1 cut(s) 629
PfeI GAWTC 3 cut(s) 367, 1237, 1701
PflMI CCANNNNNTGG 2 cut(s) 187, 929
PkrI GCNGC 8 cut(s) 8, 1006, 1476, 1488, 1632, 1759, 1762, 1765
PleI GAGTC 7 cut(s) 317, 418, 616, 1184, 1410, 1600, 1639
PmaCI CACGTG 1 cut(s) 1637
PmlI CACGTG 1 cut(s) 1637
PpsI GAGTC 7 cut(s) 317, 418, 616, 1184, 1410, 1600, 1639
Ppu21I YACGTR 1 cut(s) 1637
PpuMI RGGWCCY 1 cut(s) 829
Psp124BI GAGCTC 1 cut(s) 843
Psp5II RGGWCCY 1 cut(s) 829
PspCI CACGTG 1 cut(s) 1637
PspFI CCCAGC 5 cut(s) 63, 350, 469, 881, 1411
PspN4I GGNNCC 4 cut(s) 830, 831, 1029, 1503
PspPI GGNCC 4 cut(s) 190, 422, 829, 1027
PspPPI RGGWCCY 1 cut(s) 829
PstNI CAGNNNCTG 1 cut(s) 187
PsuI RGATCY 3 cut(s) 1666, 1693, 1723
PvuII CAGCTG 1 cut(s) 469
RsaI GTAC 1 cut(s) 695
RsaNI GTAC 1 cut(s) 694
RseI CAYNNNNRTG 3 cut(s) 228, 981, 1614
SacI GAGCTC 1 cut(s) 843
SapI GCTCTTC 2 cut(s) 79, 1445
SaqAI TTAA 5 cut(s) 267, 597, 723, 1265, 1539
SatI GCNGC 8 cut(s) 7, 1005, 1475, 1487, 1631, 1758, 1761, 1764
Sau3AI GATC 6 cut(s) 865, 888, 1600, 1666, 1693, 1723
Sau96I GGNCC 4 cut(s) 190, 422, 829, 1027
ScaI AGTACT 1 cut(s) 695
SchI GAGTC 7 cut(s) 317, 419, 617, 1185, 1410, 1600, 1639
ScrFI CCNGG 1 cut(s) 320
SduI GDGCHC 5 cut(s) 292, 466, 843, 1371, 1506
SfaNI GCATC 4 cut(s) 240, 591, 909, 1473
SinI GGWCC 3 cut(s) 190, 829, 1027
SmiMI CAYNNNNRTG 3 cut(s) 228, 981, 1614
SmlI CTYRAG 3 cut(s) 50, 116, 842
SmoI CTYRAG 3 cut(s) 50, 116, 842
Sse9I AATT 3 cut(s) 815, 1227, 1321
SseBI AGGCCT 1 cut(s) 56
SsiI CCGC 5 cut(s) 7, 576, 1474, 1477, 1630
SspMI CTAG 2 cut(s) 1062, 1691
SstI GAGCTC 1 cut(s) 843
StuI AGGCCT 1 cut(s) 56
StyD4I CCNGG 1 cut(s) 318
StyI CCWWGG 1 cut(s) 1352
TaaI ACNGT 2 cut(s) 343, 1511
TaiI ACGT 1 cut(s) 1639
TaqI TCGA 9 cut(s) 210, 413, 585, 606, 611, 804, 1216, 1699, 1740
TasI AATT 3 cut(s) 815, 1227, 1321
TatI WGTACW 1 cut(s) 693
TauI GCSGC 3 cut(s) 9, 1477, 1633
TfiI GAWTC 3 cut(s) 367, 1237, 1701
Tru1I TTAA 5 cut(s) 267, 597, 723, 1265, 1539
Tru9I TTAA 5 cut(s) 267, 597, 723, 1265, 1539
TscAI CASTG 4 cut(s) 693, 1247, 1410, 1429
TseFI GTSAC 3 cut(s) 145, 1177, 1642
TseI GCWGC 5 cut(s) 1004, 1486, 1757, 1760, 1763
Tsp45I GTSAC 3 cut(s) 145, 1177, 1642
TspDTI ATGAA 7 cut(s) 92, 152, 488, 525, 801, 822, 1313
TspGWI ACGGA 2 cut(s) 529, 1694
TspRI CASTG 4 cut(s) 693, 1247, 1410, 1429
Van91I CCANNNNNTGG 2 cut(s) 187, 929
VpaK11BI GGWCC 3 cut(s) 190, 829, 1027
XagI CCTNNNNNAGG 1 cut(s) 1552
XceI RCATGY 1 cut(s) 1016
XmiI GTMKAC 2 cut(s) 168, 1307
XmnI GAANNNNTTC 1 cut(s) 629
XspI CTAG 2 cut(s) 1062, 1691
ZrmI AGTACT 1 cut(s) 695
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.