Prupe.5G140500_v2.0.a1

beta-1,4-xylosyltransferase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
13094967 .. 13098003
3037 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G140500.1

Sequence Viewer

Length: 1242 bp
ATGAGAATTTGGAAGTTGGGTTTTGCTGTGCTTCTTTGTGCTGCCTTTCTGTTGGGGATTGGCTCAGGGGAGCAGGCCCGCACTGAGAGAATTTCAGGTAGTGCTGGTGATGTCTTGGACGATGACCCAGTGGGGAGGTTGAAAGTTTTTGTGTATGAGCTTCCAAGCAAATACAACAAGAAGATTCTGCAGAAGGACCCTAGATGCCTGAACCACATGTTTGCAGCTGAGATCTATATGCATCGGTTTCTCCTATCCAGCCCCGTCCGAACCCTTAATCCTGAGGAAGCTGATTGGTTTTATACTCCTGTATACACTACTTGTGACCTGACGCCCAATGGCCTTCCTTTGCCTTTTAAGTCACCACGGATGATGAGAAGTGCGATACAACTGATATCTTCAAATTGGCCTTATTGGAACCGGACAGAAGGGGCAGATCACTTTTTTGTAGTGCCTCATGATTTTGGAGCATGCTTTCATTATCAGGAAGAAAAGGCGATTGAAAGAGGAATTCTTCCCTTGCTCCAGCGTGCAACTTTGGTTCAGACTTTTGGGCAACAGAATCATGTTTGCTTGAAAGAGGGCTCAATTACGGTTCCTCCTTATGCTCCTCCACAGAAAATGCAAACCCACCTAATTCCTGAGAAAACTCCTAGATCCATCTTTGTTTACTTCCGTGGATTGTTTTATGATGTGGGAAATGACCCAGAAGGTGGTTATTATGCAAGAGGTGCACGAGCAGCAGTGTGGGAGAACTTCAAAGACAATCCTCTTTTTGACATTTCCACTGAGCACCCCACCACATACTATGAGGACATGCAACGAGCAGTCTTTTGTTTGTGTCCGCTCGGCTGGGCTCCTTGGAGTCCAAGATTGGTTGAAGCAGTGATTTTCGGCTGCATTCCTGTTATCATAGCAGATGACATTGTTCTACCCTTTGCTGATGCGATCCCTTGGGAAGAAATTGGCGTGTTTGTAGCTGAGGAAGATGTCCCCAACTTGGACACCATACTCACTTCAATCCCACCAGAACTGATATTAAGAAAGCAGCGATTGCTTGCCAATCCTTCAATGAAGCAAGCAATGTTGTTCCCACAACCTGCCGAAGCAGGAGATGCTTTTCATCAAGTTCTGAATGGGCTTGCGCGTAAATTGCCGCATGGCCCCGGTGTTTACTTTAAGCCAGGTGAAAAGATCCTAAACTGGACTGCAGGGCCAGTGGGTGACCTGAAACCTTGGTAG

Protein Analysis

414

Amino Acids

46.66

Weight (kDa)

5.96

Isoelectric Point (pI)

44.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013973)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1108
AccB7I CCANNNNNTGG 1 cut(s) 713
AccBSI CCGCTC 1 cut(s) 847
AccI GTMKAC 1 cut(s) 312
AccII CGCG 1 cut(s) 1147
AciI CCGC 3 cut(s) 79, 845, 1157
AclWI GGATC 3 cut(s) 651, 943, 1189
AcsI RAATTY 3 cut(s) 6, 90, 510
AcyI GRCGYC 1 cut(s) 332
AfiI CCNNNNNNNGG 2 cut(s) 713, 1000
AflIII ACRYGT 1 cut(s) 216
AgsI TTSAA 8 cut(s) 142, 402, 503, 577, 760, 881, 1020, 1071
AjnI CCWGG 1 cut(s) 1183
AloI GAACNNNNNNTCC 2 cut(s) 262, 294
AluBI AGCT 4 cut(s) 160, 227, 290, 980
AluI AGCT 4 cut(s) 160, 227, 290, 980
Alw21I GWGCWC 2 cut(s) 736, 795
Alw44I GTGCAC 1 cut(s) 732
AlwI GGATC 3 cut(s) 651, 943, 1189
AoxI GGCC 5 cut(s) 75, 340, 407, 1162, 1214
ApaLI GTGCAC 1 cut(s) 732
ApeKI GCWGC 5 cut(s) 41, 224, 740, 897, 1048
ApoI RAATTY 3 cut(s) 6, 90, 510
AspLEI GCGC 1 cut(s) 1147
AspS9I GGNCC 4 cut(s) 76, 196, 1163, 1214
AsuC2I CCSGG 1 cut(s) 1167
AsuHPI GGTGA 4 cut(s) 119, 354, 1199, 1235
AvaII GGWCC 1 cut(s) 196
AxyI CCTNAGG 1 cut(s) 282
BaeGI GKGCMC 1 cut(s) 736
BanII GRGCYC 2 cut(s) 587, 859
BauI CACGAG 1 cut(s) 735
Bbv12I GWGCWC 2 cut(s) 736, 795
BbvCI CCTCAGC 1 cut(s) 981
BbvI GCAGC 5 cut(s) 28, 236, 752, 884, 1060
BccI CCATC 1 cut(s) 668
BciT130I CCWGG 1 cut(s) 1185
BcnI CCSGG 1 cut(s) 1167
BfaI CTAG 2 cut(s) 201, 654
BfmI CTRYAG 2 cut(s) 188, 1209
BfuAI ACCTGC 1 cut(s) 1108
BglII AGATCT 1 cut(s) 231
BisI GCNGC 6 cut(s) 42, 225, 741, 898, 1049, 1157
BlsI GCNGC 6 cut(s) 43, 226, 742, 899, 1050, 1158
Bme1390I CCNGG 2 cut(s) 1167, 1185
Bme18I GGWCC 1 cut(s) 196
BmgT120I GGNCC 4 cut(s) 76, 196, 1163, 1214
BmiI GGNNCC 5 cut(s) 198, 419, 597, 858, 1165
BmrFI CCNGG 2 cut(s) 1167, 1185
BmrI ACTGGG 1 cut(s) 122
BmsI GCATC 4 cut(s) 194, 250, 934, 1105
BmuI ACTGGG 1 cut(s) 122
BpmI CTGGAG 1 cut(s) 509
Bpu10I CCTNAGC 2 cut(s) 64, 981
BpuMI CCSGG 1 cut(s) 1167
BsaHI GRCGYC 1 cut(s) 332
BsaJI CCNNGG 6 cut(s) 365, 676, 860, 953, 1165, 1235
BsaWI WCCGGW 1 cut(s) 420
BsaXI ACNNNNNCTCC 2 cut(s) 583, 613
Bsc4I CCNNNNNNNGG 2 cut(s) 713, 1000
Bse1I ACTGG 3 cut(s) 128, 1208, 1217
Bse21I CCTNAGG 1 cut(s) 282
Bse3DI GCAATG 1 cut(s) 1089
BseBI CCWGG 1 cut(s) 1185
BseDI CCNNGG 6 cut(s) 365, 676, 860, 953, 1165, 1235
BseGI GGATG 1 cut(s) 375
BseLI CCNNNNNNNGG 2 cut(s) 713, 1000
BseMI GCAATG 1 cut(s) 1089
BseMII CTCAG 7 cut(s) 75, 78, 219, 273, 633, 780, 972
BseNI ACTGG 3 cut(s) 128, 1208, 1217
BseRI GAGGAG 1 cut(s) 600
BseSI GKGCMC 1 cut(s) 736
BseXI GCAGC 5 cut(s) 28, 236, 752, 884, 1060
BseYI CCCAGC 1 cut(s) 852
Bsh1236I CGCG 1 cut(s) 1147
BshFI GGCC 5 cut(s) 77, 342, 409, 1164, 1216
BsiHKAI GWGCWC 2 cut(s) 736, 795
BsiSI CCGG 2 cut(s) 421, 1167
BslFI GGGAC 1 cut(s) 977
BslI CCNNNNNNNGG 2 cut(s) 713, 1000
BsmFI GGGAC 1 cut(s) 977
BsmI GAATGC 1 cut(s) 900
BsnI GGCC 5 cut(s) 77, 342, 409, 1164, 1216
Bsp1286I GDGCHC 4 cut(s) 587, 736, 795, 859
Bsp143I GATC 5 cut(s) 231, 436, 656, 948, 1194
BspACI CCGC 3 cut(s) 79, 845, 1157
BspANI GGCC 5 cut(s) 77, 342, 409, 1164, 1216
BspCNI CTCAG 7 cut(s) 76, 77, 220, 274, 634, 781, 973
BspFNI CGCG 1 cut(s) 1147
BspHI TCATGA 1 cut(s) 457
BspLI GGNNCC 5 cut(s) 198, 419, 597, 858, 1165
BspMAI CTGCAG 2 cut(s) 192, 1213
BspMI ACCTGC 1 cut(s) 1108
BspPI GGATC 3 cut(s) 651, 943, 1189
BsrBI CCGCTC 1 cut(s) 847
BsrDI GCAATG 1 cut(s) 1089
BsrI ACTGG 3 cut(s) 128, 1208, 1217
BssECI CCNNGG 6 cut(s) 365, 676, 860, 953, 1165, 1235
BssMI GATC 5 cut(s) 231, 436, 656, 948, 1194
BssNAI GTATAC 1 cut(s) 313
BssNI GRCGYC 1 cut(s) 332
BssSI CACGAG 1 cut(s) 735
BssT1I CCWWGG 3 cut(s) 860, 953, 1235
Bst1107I GTATAC 1 cut(s) 313
Bst2BI CACGAG 1 cut(s) 735
Bst2UI CCWGG 1 cut(s) 1185
Bst4CI ACNGT 1 cut(s) 595
BstACI GRCGYC 1 cut(s) 332
BstAPI GCANNNNNTGC 3 cut(s) 731, 1054, 1115
BstC8I GCNNGC 7 cut(s) 75, 79, 472, 531, 1059, 1080, 1143
BstDEI CTNAG 7 cut(s) 64, 84, 228, 282, 642, 789, 981
BstDSI CCRYGG 2 cut(s) 365, 676
BstEII GGTNACC 1 cut(s) 1223
BstF5I GGATG 1 cut(s) 375
BstFNI CGCG 1 cut(s) 1147
BstHHI GCGC 1 cut(s) 1147
BstKTI GATC 5 cut(s) 234, 439, 659, 951, 1197
BstMBI GATC 5 cut(s) 231, 436, 656, 948, 1194
BstMWI GCNNNNNNNGC 5 cut(s) 731, 740, 1054, 1115, 1153
BstNI CCWGG 1 cut(s) 1185
BstNSI RCATGY 3 cut(s) 220, 474, 820
BstPI GGTNACC 1 cut(s) 1223
BstSCI CCNGG 2 cut(s) 1165, 1183
BstSFI CTRYAG 2 cut(s) 188, 1209
BstSLI GKGCMC 1 cut(s) 736
BstUI CGCG 1 cut(s) 1147
BstV1I GCAGC 5 cut(s) 28, 236, 752, 884, 1060
BstX2I RGATCY 3 cut(s) 231, 656, 1194
BstYI RGATCY 3 cut(s) 231, 656, 1194
BstZ17I GTATAC 1 cut(s) 313
Bsu36I CCTNAGG 1 cut(s) 282
BsuRI GGCC 5 cut(s) 77, 342, 409, 1164, 1216
BtgI CCRYGG 2 cut(s) 365, 676
BtsCI GGATG 1 cut(s) 375
BtsI GCAGTG 2 cut(s) 750, 891
BtsIMutI CAGTG 6 cut(s) 81, 135, 750, 786, 891, 1224
BveI ACCTGC 1 cut(s) 1108
Cac8I GCNNGC 7 cut(s) 75, 79, 472, 531, 1059, 1080, 1143
CciI TCATGA 1 cut(s) 457
CfoI GCGC 1 cut(s) 1147
Cfr13I GGNCC 4 cut(s) 76, 196, 1163, 1214
CseI GACGC 1 cut(s) 340
CviAII CATG 6 cut(s) 217, 458, 471, 566, 817, 1160
DdeI CTNAG 7 cut(s) 64, 84, 228, 282, 642, 789, 981
DpnI GATC 5 cut(s) 233, 438, 658, 950, 1196
DpnII GATC 5 cut(s) 231, 436, 656, 948, 1194
Eco130I CCWWGG 3 cut(s) 860, 953, 1235
Eco24I GRGCYC 2 cut(s) 587, 859
Eco32I GATATC 1 cut(s) 396
Eco47I GGWCC 1 cut(s) 196
Eco81I CCTNAGG 1 cut(s) 282
Eco91I GGTNACC 1 cut(s) 1223
EcoO109I RGGNCCY 1 cut(s) 196
EcoO65I GGTNACC 1 cut(s) 1223
EcoRI GAATTC 1 cut(s) 510
EcoRII CCWGG 1 cut(s) 1183
EcoRV GATATC 1 cut(s) 396
EcoT14I CCWWGG 3 cut(s) 860, 953, 1235
EcoT22I ATGCAT 1 cut(s) 243
EcoT38I GRGCYC 2 cut(s) 587, 859
ErhI CCWWGG 3 cut(s) 860, 953, 1235
FaeI CATG 6 cut(s) 220, 461, 474, 569, 820, 1163
FaqI GGGAC 1 cut(s) 977
FatI CATG 6 cut(s) 216, 457, 470, 565, 816, 1159
FauI CCCGC 1 cut(s) 86
FblI GTMKAC 1 cut(s) 312
Fnu4HI GCNGC 6 cut(s) 42, 225, 741, 898, 1049, 1157
FokI GGATG 1 cut(s) 382
FriOI GRGCYC 2 cut(s) 587, 859
Fsp4HI GCNGC 6 cut(s) 42, 225, 741, 898, 1049, 1157
FspBI CTAG 2 cut(s) 201, 654
GlaI GCGC 1 cut(s) 1146
GluI GCNGC 6 cut(s) 42, 225, 741, 898, 1049, 1157
GsaI CCCAGC 1 cut(s) 856
GsuI CTGGAG 1 cut(s) 509
HaeIII GGCC 5 cut(s) 77, 342, 409, 1164, 1216
HapII CCGG 2 cut(s) 421, 1167
HgaI GACGC 1 cut(s) 340
HhaI GCGC 1 cut(s) 1147
Hin1I GRCGYC 1 cut(s) 332
Hin1II CATG 6 cut(s) 220, 461, 474, 569, 820, 1163
Hin6I GCGC 1 cut(s) 1145
HinP1I GCGC 1 cut(s) 1145
HinfI GANTC 3 cut(s) 184, 562, 865
HpaII CCGG 2 cut(s) 421, 1167
HphI GGTGA 4 cut(s) 119, 354, 1199, 1235
Hpy166II GTNNAC 4 cut(s) 313, 670, 734, 1174
Hpy188I TCNGA 3 cut(s) 269, 546, 1134
Hpy188III TCNNGA 4 cut(s) 281, 458, 485, 641
Hpy8I GTNNAC 4 cut(s) 313, 670, 734, 1174
HpyAV CCTTC 5 cut(s) 187, 353, 422, 704, 1077
HpyCH4III ACNGT 1 cut(s) 595
HpyF10VI GCNNNNNNNGC 5 cut(s) 731, 740, 1054, 1115, 1153
HpyF3I CTNAG 7 cut(s) 64, 84, 228, 282, 642, 789, 981
Hsp92I GRCGYC 1 cut(s) 332
Hsp92II CATG 6 cut(s) 220, 461, 474, 569, 820, 1163
HspAI GCGC 1 cut(s) 1145
Kzo9I GATC 5 cut(s) 231, 436, 656, 948, 1194
LmnI GCTCC 5 cut(s) 70, 467, 528, 613, 862
Lsp1109I GCAGC 5 cut(s) 28, 236, 752, 884, 1060
LweI GCATC 4 cut(s) 194, 250, 934, 1105
MaeI CTAG 2 cut(s) 201, 654
MaeIII GTNAC 3 cut(s) 323, 360, 1223
MalI GATC 5 cut(s) 233, 438, 658, 950, 1196
MbiI CCGCTC 1 cut(s) 847
MboI GATC 5 cut(s) 231, 436, 656, 948, 1194
MboII GAAGA 6 cut(s) 193, 390, 500, 506, 971, 998
MflI RGATCY 3 cut(s) 231, 656, 1194
MhlI GDGCHC 4 cut(s) 587, 736, 795, 859
MluCI AATT 8 cut(s) 6, 90, 403, 510, 588, 636, 963, 1151
MlyI GAGTC 1 cut(s) 874
Mph1103I ATGCAT 1 cut(s) 243
MseI TTAA 4 cut(s) 276, 357, 1040, 1179
MspA1I CMGCKG 1 cut(s) 227
MspI CCGG 2 cut(s) 421, 1167
MspR9I CCNGG 2 cut(s) 1167, 1185
Mva1269I GAATGC 1 cut(s) 900
MvaI CCWGG 1 cut(s) 1185
MvnI CGCG 1 cut(s) 1147
MwoI GCNNNNNNNGC 5 cut(s) 731, 740, 1054, 1115, 1153
NciI CCSGG 1 cut(s) 1167
NdeII GATC 5 cut(s) 231, 436, 656, 948, 1194
NlaIII CATG 6 cut(s) 220, 461, 474, 569, 820, 1163
NlaIV GGNNCC 5 cut(s) 198, 419, 597, 858, 1165
NmeAIII GCCGAG 1 cut(s) 828
NmuCI GTSAC 3 cut(s) 323, 360, 1223
NsiI ATGCAT 1 cut(s) 243
NspI RCATGY 3 cut(s) 220, 474, 820
PaeI GCATGC 1 cut(s) 474
PagI TCATGA 1 cut(s) 457
PciI ACATGT 1 cut(s) 216
PctI GAATGC 1 cut(s) 900
PfeI GAWTC 2 cut(s) 184, 562
PflMI CCANNNNNTGG 1 cut(s) 713
PkrI GCNGC 6 cut(s) 43, 226, 742, 899, 1050, 1158
PleI GAGTC 1 cut(s) 873
PpsI GAGTC 1 cut(s) 873
PpuMI RGGWCCY 1 cut(s) 196
PscI ACATGT 1 cut(s) 216
Psp5II RGGWCCY 1 cut(s) 196
Psp6I CCWGG 1 cut(s) 1183
PspEI GGTNACC 1 cut(s) 1223
PspFI CCCAGC 1 cut(s) 852
PspGI CCWGG 1 cut(s) 1183
PspN4I GGNNCC 5 cut(s) 198, 419, 597, 858, 1165
PspPI GGNCC 4 cut(s) 76, 196, 1163, 1214
PspPPI RGGWCCY 1 cut(s) 196
PstI CTGCAG 2 cut(s) 192, 1213
PsuI RGATCY 3 cut(s) 231, 656, 1194
PvuII CAGCTG 1 cut(s) 227
SaqAI TTAA 4 cut(s) 276, 357, 1040, 1179
SatI GCNGC 6 cut(s) 42, 225, 741, 898, 1049, 1157
Sau3AI GATC 5 cut(s) 231, 436, 656, 948, 1194
Sau96I GGNCC 4 cut(s) 76, 196, 1163, 1214
SchI GAGTC 1 cut(s) 874
ScrFI CCNGG 2 cut(s) 1167, 1185
SduI GDGCHC 4 cut(s) 587, 736, 795, 859
SfaNI GCATC 4 cut(s) 194, 250, 934, 1105
SfcI CTRYAG 2 cut(s) 188, 1209
SinI GGWCC 1 cut(s) 196
SphI GCATGC 1 cut(s) 474
Sse9I AATT 8 cut(s) 6, 90, 403, 510, 588, 636, 963, 1151
SsiI CCGC 3 cut(s) 79, 845, 1157
SspMI CTAG 2 cut(s) 201, 654
StyD4I CCNGG 2 cut(s) 1165, 1183
StyI CCWWGG 3 cut(s) 860, 953, 1235
TaaI ACNGT 1 cut(s) 595
TasI AATT 8 cut(s) 6, 90, 403, 510, 588, 636, 963, 1151
TauI GCSGC 1 cut(s) 1159
TfiI GAWTC 2 cut(s) 184, 562
Tru1I TTAA 4 cut(s) 276, 357, 1040, 1179
Tru9I TTAA 4 cut(s) 276, 357, 1040, 1179
TscAI CASTG 6 cut(s) 88, 135, 750, 793, 891, 1224
TseFI GTSAC 3 cut(s) 323, 360, 1223
TseI GCWGC 5 cut(s) 41, 224, 740, 897, 1048
Tsp45I GTSAC 3 cut(s) 323, 360, 1223
TspDTI ATGAA 3 cut(s) 467, 1088, 1112
TspGWI ACGGA 2 cut(s) 382, 665
TspRI CASTG 6 cut(s) 88, 135, 750, 793, 891, 1224
Van91I CCANNNNNTGG 1 cut(s) 713
VneI GTGCAC 1 cut(s) 732
VpaK11BI GGWCC 1 cut(s) 196
XapI RAATTY 3 cut(s) 6, 90, 510
XceI RCATGY 3 cut(s) 220, 474, 820
XmiI GTMKAC 1 cut(s) 312
XspI CTAG 2 cut(s) 201, 654
Zsp2I ATGCAT 1 cut(s) 243
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.