Prupe.5G177400_v2.0.a1
ERF Family

Belongs to the small GTPase superfamily. Rho family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
14998089 .. 15001577
3489 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G177400.2

Sequence Viewer

Length: 636 bp
ATGGCGTCAAGCGCTTCAAGGTTCATAAAGTGTGTGACGGTGGGAGATGGAGCTGTGGGGAAGACCTGTATGCTTATTTGCTACACCAGCAACAAATTTCCCACGGATTATATACCCACTGTGTTTGATAACTTCAGCGCTAATGTGGTGGTTGAAGGCACCACAGTGAACTTAGGCCTCTGGGACACCGCTGGGCAAGAGGATTACAATCGATTAAGGCCATTGAGCTACAGAGGGGCAGATGTCTTTGTCTTAGCTTTCTCATTAGTTAGTCGTGCAAGCTATGAGAACGTGCTGAAAAAGTGGATCCCTGAACTCCAGCATTATGCTCCCGGAGTCCCAGTTGTACTTGCTGGCACCAAATTAGATCTTCGAGAGGATAAGCACTATTTGGCTGATCACCCAGGATTGGTACCTGTGACCACTGCACAGGGCGAGGAGCTGCGCAAGCAGATTGGTGCTTCATTTTATATAGAATGCAGCTCAAAAACTCAGCAGGTATGTATCAACTGGTATTTATATTCTCATAACGCTACTGAATCATTAGTATATTTGAAGCTGCATATTTTGAGGAGAGACGTGCATGGTTCTTTCCAAATTAAACCAACTAATCTTAGTATTCACTTGTCAAATTGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

212

Amino Acids

23.56

Weight (kDa)

7.67

Isoelectric Point (pI)

42.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013804)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48040 AT3G48040 AT5G62880 AT5G62880
fragaria_vesca FvH4_5g16650 FvH4_5g16650
malus_domestica MD14G1184700.v1.1
prunus_persica Prupe.5G177400_v2.0.a1 Prupe.5G177400_v2.0.a1
pyrus_communis pycom14g15370
rosa_chinensis RchiOBHm_Chr7g0179501
rosa_laevigata RLG00000005349
rosa_multiflora Rmu_sc0000735.1_g000009
rosa_roxburghii Rroxscaffold_3G00273940
rosa_rugosa Rorug06G0424900
rosa_samantha Rh7CG025400
rosa_wichuraiana Rw7G001990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 446
Acc36I ACCTGC 1 cut(s) 487
Acc65I GGTACC 1 cut(s) 412
AccB1I GGYRCC 3 cut(s) 158, 356, 412
AciI CCGC 1 cut(s) 189
AclWI GGATC 2 cut(s) 301, 314
AcsI RAATTY 1 cut(s) 95
AcuI CTGAAG 1 cut(s) 118
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 2 cut(s) 348, 414
AfeI AGCGCT 2 cut(s) 13, 139
AfiI CCNNNNNNNGG 1 cut(s) 409
AgsI TTSAA 3 cut(s) 18, 155, 556
AjiI CACGTC 1 cut(s) 580
AjnI CCWGG 1 cut(s) 403
AleI CACNNNNGTG 1 cut(s) 164
AluBI AGCT 7 cut(s) 53, 228, 257, 282, 442, 483, 559
AluI AGCT 7 cut(s) 53, 228, 257, 282, 442, 483, 559
Alw26I GTCTC 1 cut(s) 570
AlwI GGATC 2 cut(s) 301, 314
Aor51HI AGCGCT 2 cut(s) 13, 139
AoxI GGCC 2 cut(s) 175, 218
ApeKI GCWGC 3 cut(s) 442, 480, 559
ApoI RAATTY 1 cut(s) 95
Asp718I GGTACC 1 cut(s) 412
AspLEI GCGC 3 cut(s) 14, 140, 447
AsuC2I CCSGG 1 cut(s) 333
AsuHPI GGTGA 1 cut(s) 392
BamHI GGATCC 1 cut(s) 306
BanI GGYRCC 3 cut(s) 158, 356, 412
BbsI GAAGAC 1 cut(s) 68
BbvI GCAGC 3 cut(s) 429, 492, 546
BccI CCATC 1 cut(s) 41
BciT130I CCWGG 1 cut(s) 405
BclI TGATCA 1 cut(s) 397
BcnI CCSGG 1 cut(s) 333
BcoDI GTCTC 1 cut(s) 570
BfmI CTRYAG 1 cut(s) 229
BfoI RGCGCY 2 cut(s) 15, 141
BfuAI ACCTGC 1 cut(s) 487
BglII AGATCT 1 cut(s) 367
BisI GCNGC 3 cut(s) 443, 481, 560
BlsI GCNGC 3 cut(s) 444, 482, 561
Bme1390I CCNGG 2 cut(s) 333, 405
BmgBI CACGTC 1 cut(s) 580
BmiI GGNNCC 4 cut(s) 160, 308, 358, 414
BmrFI CCNGG 2 cut(s) 333, 405
BmrI ACTGGG 1 cut(s) 335
BmuI ACTGGG 1 cut(s) 335
BpiI GAAGAC 1 cut(s) 68
BpmI CTGGAG 1 cut(s) 302
BpuMI CCSGG 1 cut(s) 333
Bsa29I ATCGAT 1 cut(s) 211
BsaBI GATNNNNATC 1 cut(s) 207
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 2 cut(s) 102, 403
BsaXI ACNNNNNCTCC 2 cut(s) 327, 357
Bsc4I CCNNNNNNNGG 1 cut(s) 409
Bse1I ACTGG 2 cut(s) 341, 515
Bse8I GATNNNNATC 1 cut(s) 207
BseBI CCWGG 1 cut(s) 405
BseCI ATCGAT 1 cut(s) 211
BseDI CCNNGG 2 cut(s) 102, 403
BseJI GATNNNNATC 1 cut(s) 207
BseLI CCNNNNNNNGG 1 cut(s) 409
BseMII CTCAG 1 cut(s) 506
BseNI ACTGG 2 cut(s) 341, 515
BseRI GAGGAG 2 cut(s) 452, 586
BseXI GCAGC 3 cut(s) 429, 492, 546
BseYI CCCAGC 1 cut(s) 191
BsgI GTGCAG 1 cut(s) 411
BshFI GGCC 2 cut(s) 177, 220
BshNI GGYRCC 3 cut(s) 158, 356, 412
BshVI ATCGAT 1 cut(s) 211
BsiSI CCGG 1 cut(s) 333
BslFI GGGAC 2 cut(s) 197, 323
BslI CCNNNNNNNGG 1 cut(s) 409
BsmAI GTCTC 1 cut(s) 570
BsmBI CGTCTC 1 cut(s) 570
BsmFI GGGAC 2 cut(s) 197, 323
BsmI GAATGC 1 cut(s) 482
BsnI GGCC 2 cut(s) 177, 220
Bsp143I GATC 3 cut(s) 306, 367, 397
BspACI CCGC 1 cut(s) 189
BspANI GGCC 2 cut(s) 177, 220
BspCNI CTCAG 1 cut(s) 505
BspDI ATCGAT 1 cut(s) 211
BspLI GGNNCC 4 cut(s) 160, 308, 358, 414
BspMI ACCTGC 1 cut(s) 487
BspPI GGATC 2 cut(s) 301, 314
BspT107I GGYRCC 3 cut(s) 158, 356, 412
BsrI ACTGG 2 cut(s) 341, 515
BssECI CCNNGG 2 cut(s) 102, 403
BssMI GATC 3 cut(s) 306, 367, 397
BssNI GRCGYC 1 cut(s) 5
Bst2UI CCWGG 1 cut(s) 405
Bst4CI ACNGT 3 cut(s) 40, 121, 166
BstACI GRCGYC 1 cut(s) 5
BstC8I GCNNGC 3 cut(s) 280, 355, 449
BstDEI CTNAG 4 cut(s) 172, 253, 492, 614
BstDSI CCRYGG 1 cut(s) 102
BstH2I RGCGCY 2 cut(s) 15, 141
BstHHI GCGC 3 cut(s) 14, 140, 447
BstKTI GATC 3 cut(s) 309, 370, 400
BstMAI GTCTC 1 cut(s) 570
BstMBI GATC 3 cut(s) 306, 367, 397
BstMWI GCNNNNNNNGC 3 cut(s) 11, 87, 448
BstNI CCWGG 1 cut(s) 405
BstSCI CCNGG 2 cut(s) 331, 403
BstSFI CTRYAG 1 cut(s) 229
BstV1I GCAGC 3 cut(s) 429, 492, 546
BstV2I GAAGAC 1 cut(s) 68
BstX2I RGATCY 2 cut(s) 306, 367
BstYI RGATCY 2 cut(s) 306, 367
Bsu15I ATCGAT 1 cut(s) 211
BsuRI GGCC 2 cut(s) 177, 220
BsuTUI ATCGAT 1 cut(s) 211
BtgI CCRYGG 1 cut(s) 102
BtrI CACGTC 1 cut(s) 580
BtsI GCAGTG 1 cut(s) 423
BtsIMutI CAGTG 3 cut(s) 117, 171, 423
BveI ACCTGC 1 cut(s) 487
Cac8I GCNNGC 3 cut(s) 280, 355, 449
CfoI GCGC 3 cut(s) 14, 140, 447
ClaI ATCGAT 1 cut(s) 211
Csp6I GTAC 2 cut(s) 347, 413
CspCI CAANNNNNGTGG 2 cut(s) 106, 141
CviAII CATG 1 cut(s) 584
CviQI GTAC 2 cut(s) 347, 413
DdeI CTNAG 4 cut(s) 172, 253, 492, 614
DpnI GATC 3 cut(s) 308, 369, 399
DpnII GATC 3 cut(s) 306, 367, 397
Eco147I AGGCCT 1 cut(s) 177
Eco47III AGCGCT 2 cut(s) 13, 139
Eco57I CTGAAG 1 cut(s) 118
EcoRII CCWGG 1 cut(s) 403
Esp3I CGTCTC 1 cut(s) 570
FaeI CATG 1 cut(s) 587
FaqI GGGAC 2 cut(s) 197, 323
FatI CATG 1 cut(s) 583
FbaI TGATCA 1 cut(s) 397
Fnu4HI GCNGC 3 cut(s) 443, 481, 560
Fsp4HI GCNGC 3 cut(s) 443, 481, 560
FspI TGCGCA 1 cut(s) 446
GlaI GCGC 3 cut(s) 13, 139, 446
GluI GCNGC 3 cut(s) 443, 481, 560
GsaI CCCAGC 1 cut(s) 195
GsuI CTGGAG 1 cut(s) 302
HaeII RGCGCY 2 cut(s) 15, 141
HaeIII GGCC 2 cut(s) 177, 220
HapII CCGG 1 cut(s) 333
HhaI GCGC 3 cut(s) 14, 140, 447
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 1 cut(s) 587
Hin6I GCGC 3 cut(s) 12, 138, 445
HinP1I GCGC 3 cut(s) 12, 138, 445
HinfI GANTC 2 cut(s) 336, 539
HpaII CCGG 1 cut(s) 333
HphI GGTGA 1 cut(s) 392
Hpy166II GTNNAC 1 cut(s) 169
Hpy188III TCNNGA 1 cut(s) 374
Hpy8I GTNNAC 1 cut(s) 169
HpyAV CCTTC 1 cut(s) 149
HpyCH4III ACNGT 3 cut(s) 40, 121, 166
HpyCH4IV ACGT 2 cut(s) 291, 579
HpyCH4V TGCA 5 cut(s) 278, 428, 480, 562, 583
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 87, 448
HpyF3I CTNAG 4 cut(s) 172, 253, 492, 614
HpySE526I ACGT 2 cut(s) 291, 579
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 1 cut(s) 587
HspAI GCGC 3 cut(s) 12, 138, 445
KpnI GGTACC 1 cut(s) 416
Ksp22I TGATCA 1 cut(s) 397
Kzo9I GATC 3 cut(s) 306, 367, 397
LmnI GCTCC 3 cut(s) 50, 334, 439
Lsp1109I GCAGC 3 cut(s) 429, 492, 546
MaeII ACGT 2 cut(s) 291, 579
MaeIII GTNAC 2 cut(s) 34, 418
MalI GATC 3 cut(s) 308, 369, 399
MboI GATC 3 cut(s) 306, 367, 397
MboII GAAGA 2 cut(s) 73, 362
MflI RGATCY 2 cut(s) 306, 367
MluCI AATT 4 cut(s) 95, 362, 597, 631
MlyI GAGTC 1 cut(s) 345
MnlI CCTC 6 cut(s) 188, 193, 227, 370, 430, 564
MseI TTAA 2 cut(s) 215, 600
MslI CAYNNNNRTG 1 cut(s) 164
MspA1I CMGCKG 1 cut(s) 191
MspI CCGG 1 cut(s) 333
MspR9I CCNGG 2 cut(s) 333, 405
Mva1269I GAATGC 1 cut(s) 482
MvaI CCWGG 1 cut(s) 405
MwoI GCNNNNNNNGC 3 cut(s) 11, 87, 448
NciI CCSGG 1 cut(s) 333
NdeII GATC 3 cut(s) 306, 367, 397
NlaIII CATG 1 cut(s) 587
NlaIV GGNNCC 4 cut(s) 160, 308, 358, 414
NmuCI GTSAC 2 cut(s) 34, 418
NsbI TGCGCA 1 cut(s) 446
OliI CACNNNNGTG 1 cut(s) 164
PceI AGGCCT 1 cut(s) 177
PctI GAATGC 1 cut(s) 482
PfeI GAWTC 1 cut(s) 539
PfoI TCCNGGA 1 cut(s) 331
PkrI GCNGC 3 cut(s) 444, 482, 561
PleI GAGTC 1 cut(s) 344
PpsI GAGTC 1 cut(s) 344
Psp6I CCWGG 1 cut(s) 403
PspFI CCCAGC 1 cut(s) 191
PspGI CCWGG 1 cut(s) 403
PspN4I GGNNCC 4 cut(s) 160, 308, 358, 414
PsuI RGATCY 2 cut(s) 306, 367
RsaI GTAC 2 cut(s) 348, 414
RsaNI GTAC 2 cut(s) 347, 413
RseI CAYNNNNRTG 1 cut(s) 164
SaqAI TTAA 2 cut(s) 215, 600
SatI GCNGC 3 cut(s) 443, 481, 560
Sau3AI GATC 3 cut(s) 306, 367, 397
SchI GAGTC 1 cut(s) 345
ScrFI CCNGG 2 cut(s) 333, 405
SfcI CTRYAG 1 cut(s) 229
SmiMI CAYNNNNRTG 1 cut(s) 164
Sse9I AATT 4 cut(s) 95, 362, 597, 631
SseBI AGGCCT 1 cut(s) 177
SsiI CCGC 1 cut(s) 189
StuI AGGCCT 1 cut(s) 177
StyD4I CCNGG 2 cut(s) 331, 403
TaaI ACNGT 3 cut(s) 40, 121, 166
TaiI ACGT 2 cut(s) 294, 582
TaqI TCGA 2 cut(s) 211, 373
TasI AATT 4 cut(s) 95, 362, 597, 631
TatI WGTACW 1 cut(s) 346
TfiI GAWTC 1 cut(s) 539
Tru1I TTAA 2 cut(s) 215, 600
Tru9I TTAA 2 cut(s) 215, 600
TscAI CASTG 3 cut(s) 124, 171, 430
TseFI GTSAC 2 cut(s) 34, 418
TseI GCWGC 3 cut(s) 442, 480, 559
Tsp45I GTSAC 2 cut(s) 34, 418
TspDTI ATGAA 2 cut(s) 13, 453
TspGWI ACGGA 1 cut(s) 119
TspRI CASTG 3 cut(s) 124, 171, 430
XapI RAATTY 1 cut(s) 95
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.