Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0015090

Physical Location & Seq

Genomic Coordinates Forward (+)

15242882 .. 15245703

Gene Structure 2822 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G182700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 888 bp

ATGGCAGGTAGGTTGGTGGTGGCGCTGATGGCCCAATCGTGCACATTAGCAACTCCCCCATCAGCCGTAGCCGCAATTTCCCTCAAACTCTCCCGCGCCGCTATCCTTCGCCCTCCCCCTTCATACGCACCACCATCGCTTTCCACTCGAACAATCACAATGAACATCAACAGTCAAGAACAACAGCAAGACAATCTCGACGGCATATTCAAGCAGAAACGGATCCTACGGTCCAAAGTCCGCAAAGCCCTCAAGGCCATGGACCCCACACTCAGATCCCATGAAGATAATGCAATCCAGAGTATTGTGTTGGAAGCTCCGTGGTTTAGATCTTGTCAAAGATTATGTGCATATATATGCTGCAGTGCTTTGAGGGAAGTTGATACCTCCAACGTGTTGTCTGCAATTCTTCAAAGTCCACTCAAAGAGGGTGATGCGCGGGTGAGGAAAAAGCTTTATGTTCCGCGGGTGGAGGACAAGAATTGTCACATGAGAATGCTCAACATCTCATGTATTGATGATCTTGTTGCGAATTCGATGAACATTTTAGAACCAGCTCCAATCGATGCTGATGGAAATGAACGGGAAGATGTTTTACAGGCAAGCGACCCAGTTGATTTGTTCCTCTTACCGGGACTAGCATTTGACAGATCTGGGAGACGCTTGGGTCGTGGTGGAGGTTATTATGATACCTTCCTGAAGAACTACCAAGAGCTTGCAAAAACACGCAATTGGAAGCAACCACTCCTTGTTGCACTGTCCTATTCTGTACAAATATTGGATGAAGGTGTACCGGTCACTCCACATGACATTCTGGTGGATGCGCTTGTGTCCCCGGCGGGTGTTATTCCCATCAGCCCAGCAGCTTTAGACAGGATGAGGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006082 GO:0006575 GO:0006725 GO:0006730 GO:0006732 GO:0006760 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009396 GO:0009987 GO:0016053 GO:0016874 GO:0016879 GO:0016882 GO:0018130 GO:0019438 GO:0019752 GO:0030272 GO:0034641 GO:0035999 GO:0042398 GO:0042558 GO:0042559 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0046394 GO:0046483 GO:0046653 GO:0051186 GO:0051188 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00670 ko01100 map00670 map01100

Pfam Domains

Protein Families

5-FTHF_cyc-lig

Protein Analysis

296

Amino Acids

32.54

Weight (kDa)

8.82

Isoelectric Point (pI)

65.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015090)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13050 AT5G13050
fragaria_vesca	FvH4_5g15990
malus_domestica	MD06G1184000.v1.1
prunus_persica	Prupe.5G182700_v2.0.a1
pyrus_communis	pycom06g16300
rosa_chinensis	RchiOBHm_Chr7g0180081
rosa_laevigata	RLG00000005296
rosa_multiflora	Rmu_sc0017616.1_g000003 Rmu_ssc0000119.1_g000029
rosa_roxburghii	Rroxscaffold_3G00273130
rosa_rugosa	Rorug06G0430400
rosa_samantha	Rh7AG030700 Rh7CG032400 Rh7DG031400
rosa_wichuraiana	Rw7G002560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	666
AccII	CGCG	3 cut(s)	96, 439, 466
AciI	CCGC	8 cut(s)	72, 94, 99, 241, 439, 464, 466, 839
AclWI	GGATC	3 cut(s)	217, 230, 270
AcsI	RAATTY	1 cut(s)	532
AcuI	CTGAAG	1 cut(s)	719
AfaI	GTAC	2 cut(s)	771, 792
AfiI	CCNNNNNNNGG	1 cut(s)	631
AflIII	ACRYGT	1 cut(s)	393
AgeI	ACCGGT	1 cut(s)	793
AgsI	TTSAA	2 cut(s)	211, 413
AluBI	AGCT	5 cut(s)	317, 454, 557, 715, 866
AluI	AGCT	5 cut(s)	317, 454, 557, 715, 866
Alw21I	GWGCWC	1 cut(s)	44
Alw26I	GTCTC	1 cut(s)	652
Alw44I	GTGCAC	1 cut(s)	40
AlwI	GGATC	3 cut(s)	217, 230, 270
AoxI	GGCC	3 cut(s)	30, 255, 881
ApaLI	GTGCAC	1 cut(s)	40
ApeKI	GCWGC	2 cut(s)	360, 863
ApoI	RAATTY	1 cut(s)	532
AsiGI	ACCGGT	1 cut(s)	793
AspLEI	GCGC	4 cut(s)	25, 98, 439, 826
AspS9I	GGNCC	3 cut(s)	31, 231, 262
AsuC2I	CCSGG	2 cut(s)	633, 836
AsuHPI	GGTGA	2 cut(s)	443, 454
AvaII	GGWCC	2 cut(s)	231, 262
BaeGI	GKGCMC	1 cut(s)	44
BamHI	GGATCC	1 cut(s)	222
BarI	GAAGNNNNNNTAC	2 cut(s)	579, 611
Bbv12I	GWGCWC	1 cut(s)	44
BbvI	GCAGC	2 cut(s)	347, 875
BccI	CCATC	5 cut(s)	22, 67, 142, 566, 860
BceAI	ACGGC	2 cut(s)	50, 217
BcgI	CGANNNNNNTGC	2 cut(s)	117, 151
BcnI	CCSGG	2 cut(s)	633, 836
BcoDI	GTCTC	1 cut(s)	652
BfaI	CTAG	1 cut(s)	638
BfmI	CTRYAG	1 cut(s)	361
BfoI	RGCGCY	1 cut(s)	26
BglI	GCCNNNNNGGC	1 cut(s)	254
BglII	AGATCT	2 cut(s)	329, 650
BisI	GCNGC	4 cut(s)	72, 99, 361, 864
BlsI	GCNGC	4 cut(s)	73, 100, 362, 865
Bme1390I	CCNGG	2 cut(s)	633, 836
Bme18I	GGWCC	2 cut(s)	231, 262
BmgT120I	GGNCC	3 cut(s)	31, 231, 262
BmiI	GGNNCC	2 cut(s)	224, 264
BmrFI	CCNGG	2 cut(s)	633, 836
BmrI	ACTGGG	1 cut(s)	605
BmsI	GCATC	3 cut(s)	424, 556, 811
BmuI	ACTGGG	1 cut(s)	605
BpuEI	CTTGAG	1 cut(s)	236
BpuMI	CCSGG	2 cut(s)	633, 836
Bsa29I	ATCGAT	1 cut(s)	564
BsaJI	CCNNGG	4 cut(s)	258, 320, 464, 834
BsaWI	WCCGGW	1 cut(s)	793
Bsc4I	CCNNNNNNNGG	1 cut(s)	631
Bse118I	RCCGGY	1 cut(s)	793
Bse1I	ACTGG	1 cut(s)	611
BseCI	ATCGAT	1 cut(s)	564
BseDI	CCNNGG	4 cut(s)	258, 320, 464, 834
BseGI	GGATG	3 cut(s)	787, 826, 882
BseLI	CCNNNNNNNGG	1 cut(s)	631
BseMII	CTCAG	1 cut(s)	286
BseNI	ACTGG	1 cut(s)	611
BseSI	GKGCMC	1 cut(s)	44
BseXI	GCAGC	2 cut(s)	347, 875
BseYI	CCCAGC	1 cut(s)	859
Bsh1236I	CGCG	3 cut(s)	96, 439, 466
BshFI	GGCC	3 cut(s)	32, 257, 883
BshTI	ACCGGT	1 cut(s)	793
BshVI	ATCGAT	1 cut(s)	564
BsiHKAI	GWGCWC	1 cut(s)	44
BsiSI	CCGG	3 cut(s)	632, 794, 836
BslFI	GGGAC	2 cut(s)	648, 817
BslI	CCNNNNNNNGG	1 cut(s)	631
BsmAI	GTCTC	1 cut(s)	652
BsmBI	CGTCTC	1 cut(s)	652
BsmFI	GGGAC	2 cut(s)	648, 817
BsmI	GAATGC	1 cut(s)	501
BsnI	GGCC	3 cut(s)	32, 257, 883
Bsp1286I	GDGCHC	1 cut(s)	44
Bsp1407I	TGTACA	1 cut(s)	769
Bsp143I	GATC	5 cut(s)	222, 275, 329, 520, 650
Bsp19I	CCATGG	1 cut(s)	258
BspACI	CCGC	8 cut(s)	72, 94, 99, 241, 439, 464, 466, 839
BspANI	GGCC	3 cut(s)	32, 257, 883
BspCNI	CTCAG	1 cut(s)	285
BspDI	ATCGAT	1 cut(s)	564
BspFNI	CGCG	3 cut(s)	96, 439, 466
BspLI	GGNNCC	2 cut(s)	224, 264
BspMAI	CTGCAG	1 cut(s)	365
BspPI	GGATC	3 cut(s)	217, 230, 270
BsrFI	RCCGGY	1 cut(s)	793
BsrGI	TGTACA	1 cut(s)	769
BsrI	ACTGG	1 cut(s)	611
BssAI	RCCGGY	1 cut(s)	793
BssECI	CCNNGG	4 cut(s)	258, 320, 464, 834
BssMI	GATC	5 cut(s)	222, 275, 329, 520, 650
BssT1I	CCWWGG	1 cut(s)	258
Bst4CI	ACNGT	3 cut(s)	173, 231, 759
BstAUI	TGTACA	1 cut(s)	769
BstC8I	GCNNGC	2 cut(s)	604, 717
BstDEI	CTNAG	1 cut(s)	272
BstDSI	CCRYGG	3 cut(s)	258, 320, 464
BstF5I	GGATG	3 cut(s)	787, 826, 882
BstFNI	CGCG	3 cut(s)	96, 439, 466
BstH2I	RGCGCY	1 cut(s)	26
BstHHI	GCGC	4 cut(s)	25, 98, 439, 826
BstKTI	GATC	5 cut(s)	225, 278, 332, 523, 653
BstMAI	GTCTC	1 cut(s)	652
BstMBI	GATC	5 cut(s)	222, 275, 329, 520, 650
BstMWI	GCNNNNNNNGC	3 cut(s)	29, 71, 254
BstSCI	CCNGG	2 cut(s)	631, 834
BstSFI	CTRYAG	1 cut(s)	361
BstSLI	GKGCMC	1 cut(s)	44
BstUI	CGCG	3 cut(s)	96, 439, 466
BstV1I	GCAGC	2 cut(s)	347, 875
BstX2I	RGATCY	4 cut(s)	222, 275, 329, 650
BstYI	RGATCY	4 cut(s)	222, 275, 329, 650
Bsu15I	ATCGAT	1 cut(s)	564
BsuRI	GGCC	3 cut(s)	32, 257, 883
BsuTUI	ATCGAT	1 cut(s)	564
BtgI	CCRYGG	3 cut(s)	258, 320, 464
BtgZI	GCGATG	1 cut(s)	120
BtsCI	GGATG	3 cut(s)	787, 826, 882
BtsI	GCAGTG	1 cut(s)	370
BtsIMutI	CAGTG	2 cut(s)	370, 755
Cac8I	GCNNGC	2 cut(s)	604, 717
CfoI	GCGC	4 cut(s)	25, 98, 439, 826
Cfr10I	RCCGGY	1 cut(s)	793
Cfr13I	GGNCC	3 cut(s)	31, 231, 262
Cfr42I	CCGCGG	1 cut(s)	467
ClaI	ATCGAT	1 cut(s)	564
CseI	GACGC	1 cut(s)	669
Csp6I	GTAC	2 cut(s)	770, 791
CspAI	ACCGGT	1 cut(s)	793
CviAII	CATG	5 cut(s)	259, 281, 490, 510, 806
CviQI	GTAC	2 cut(s)	770, 791
DdeI	CTNAG	1 cut(s)	272
DpnI	GATC	5 cut(s)	224, 277, 331, 522, 652
DpnII	GATC	5 cut(s)	222, 275, 329, 520, 650
DrdI	GACNNNNNNGTC	1 cut(s)	666
DseDI	GACNNNNNNGTC	1 cut(s)	666
Eco130I	CCWWGG	1 cut(s)	258
Eco147I	AGGCCT	1 cut(s)	883
Eco47I	GGWCC	2 cut(s)	231, 262
Eco57I	CTGAAG	1 cut(s)	719
EcoRI	GAATTC	1 cut(s)	532
EcoT14I	CCWWGG	1 cut(s)	258
ErhI	CCWWGG	1 cut(s)	258
Esp3I	CGTCTC	1 cut(s)	652
FaeI	CATG	5 cut(s)	262, 284, 493, 513, 809
FaqI	GGGAC	2 cut(s)	648, 817
FatI	CATG	5 cut(s)	258, 280, 489, 509, 805
FauI	CCCGC	4 cut(s)	101, 432, 459, 832
Fnu4HI	GCNGC	4 cut(s)	72, 99, 361, 864
FokI	GGATG	2 cut(s)	794, 833
Fsp4HI	GCNGC	4 cut(s)	72, 99, 361, 864
FspBI	CTAG	1 cut(s)	638
GlaI	GCGC	4 cut(s)	24, 97, 438, 825
GluI	GCNGC	4 cut(s)	72, 99, 361, 864
GsaI	CCCAGC	1 cut(s)	863
HaeII	RGCGCY	1 cut(s)	26
HaeIII	GGCC	3 cut(s)	32, 257, 883
HapII	CCGG	3 cut(s)	632, 794, 836
HgaI	GACGC	1 cut(s)	669
HhaI	GCGC	4 cut(s)	25, 98, 439, 826
Hin1II	CATG	5 cut(s)	262, 284, 493, 513, 809
Hin6I	GCGC	4 cut(s)	23, 96, 437, 824
HinP1I	GCGC	4 cut(s)	23, 96, 437, 824
HindIII	AAGCTT	1 cut(s)	452
HpaII	CCGG	3 cut(s)	632, 794, 836
HphI	GGTGA	2 cut(s)	443, 454
Hpy166II	GTNNAC	3 cut(s)	42, 419, 791
Hpy188I	TCNGA	1 cut(s)	275
Hpy188III	TCNNGA	4 cut(s)	176, 197, 298, 697
Hpy8I	GTNNAC	3 cut(s)	42, 419, 791
Hpy99I	CGWCG	1 cut(s)	203
HpyAV	CCTTC	4 cut(s)	116, 129, 703, 779
HpyCH4III	ACNGT	3 cut(s)	173, 231, 759
HpyCH4IV	ACGT	1 cut(s)	393
HpyCH4V	TGCA	7 cut(s)	42, 293, 350, 363, 404, 719, 755
HpyF10VI	GCNNNNNNNGC	3 cut(s)	29, 71, 254
HpyF3I	CTNAG	1 cut(s)	272
HpySE526I	ACGT	1 cut(s)	393
Hsp92II	CATG	5 cut(s)	262, 284, 493, 513, 809
HspAI	GCGC	4 cut(s)	23, 96, 437, 824
KspI	CCGCGG	1 cut(s)	467
Kzo9I	GATC	5 cut(s)	222, 275, 329, 520, 650
LmnI	GCTCC	2 cut(s)	322, 562
Lsp1109I	GCAGC	2 cut(s)	347, 875
LweI	GCATC	3 cut(s)	424, 556, 811
MaeI	CTAG	1 cut(s)	638
MaeII	ACGT	1 cut(s)	393
MaeIII	GTNAC	2 cut(s)	485, 796
MalI	GATC	5 cut(s)	224, 277, 331, 522, 652
MboI	GATC	5 cut(s)	222, 275, 329, 520, 650
MboII	GAAGA	4 cut(s)	296, 401, 599, 712
MfeI	CAATTG	1 cut(s)	730
MflI	RGATCY	4 cut(s)	222, 275, 329, 650
MhlI	GDGCHC	1 cut(s)	44
MluCI	AATT	5 cut(s)	75, 405, 481, 532, 730
MmeI	TCCRAC	2 cut(s)	291, 414
MslI	CAYNNNNRTG	3 cut(s)	355, 494, 815
MspA1I	CMGCKG	1 cut(s)	466
MspI	CCGG	3 cut(s)	632, 794, 836
MspR9I	CCNGG	2 cut(s)	633, 836
MunI	CAATTG	1 cut(s)	730
Mva1269I	GAATGC	1 cut(s)	501
MvnI	CGCG	3 cut(s)	96, 439, 466
MwoI	GCNNNNNNNGC	3 cut(s)	29, 71, 254
NciI	CCSGG	2 cut(s)	633, 836
NcoI	CCATGG	1 cut(s)	258
NdeII	GATC	5 cut(s)	222, 275, 329, 520, 650
NlaIII	CATG	5 cut(s)	262, 284, 493, 513, 809
NlaIV	GGNNCC	2 cut(s)	224, 264
NmuCI	GTSAC	2 cut(s)	485, 796
PceI	AGGCCT	1 cut(s)	883
PcsI	WCGNNNNNNNCGW	1 cut(s)	667
PctI	GAATGC	1 cut(s)	501
PinAI	ACCGGT	1 cut(s)	793
PkrI	GCNGC	4 cut(s)	73, 100, 362, 865
PspFI	CCCAGC	1 cut(s)	859
PspN4I	GGNNCC	2 cut(s)	224, 264
PspPI	GGNCC	3 cut(s)	31, 231, 262
PstI	CTGCAG	1 cut(s)	365
PsuI	RGATCY	4 cut(s)	222, 275, 329, 650
RsaI	GTAC	2 cut(s)	771, 792
RsaNI	GTAC	2 cut(s)	770, 791
RseI	CAYNNNNRTG	3 cut(s)	355, 494, 815
SacII	CCGCGG	1 cut(s)	467
SatI	GCNGC	4 cut(s)	72, 99, 361, 864
Sau3AI	GATC	5 cut(s)	222, 275, 329, 520, 650
Sau96I	GGNCC	3 cut(s)	31, 231, 262
ScrFI	CCNGG	2 cut(s)	633, 836
SduI	GDGCHC	1 cut(s)	44
SfaNI	GCATC	3 cut(s)	424, 556, 811
SfcI	CTRYAG	1 cut(s)	361
Sfr303I	CCGCGG	1 cut(s)	467
SgrBI	CCGCGG	1 cut(s)	467
SinI	GGWCC	2 cut(s)	231, 262
SmiMI	CAYNNNNRTG	3 cut(s)	355, 494, 815
SmlI	CTYRAG	1 cut(s)	251
SmoI	CTYRAG	1 cut(s)	251
Sse9I	AATT	5 cut(s)	75, 405, 481, 532, 730
SseBI	AGGCCT	1 cut(s)	883
SsiI	CCGC	8 cut(s)	72, 94, 99, 241, 439, 464, 466, 839
SspI	AATATT	1 cut(s)	777
SspMI	CTAG	1 cut(s)	638
StuI	AGGCCT	1 cut(s)	883
StyD4I	CCNGG	2 cut(s)	631, 834
StyI	CCWWGG	1 cut(s)	258
TaaI	ACNGT	3 cut(s)	173, 231, 759
TaiI	ACGT	1 cut(s)	396
TaqI	TCGA	4 cut(s)	148, 198, 536, 564
TasI	AATT	5 cut(s)	75, 405, 481, 532, 730
TatI	WGTACW	1 cut(s)	769
TauI	GCSGC	2 cut(s)	74, 101
TscAI	CASTG	2 cut(s)	370, 762
TseFI	GTSAC	2 cut(s)	485, 796
TseI	GCWGC	2 cut(s)	360, 863
Tsp45I	GTSAC	2 cut(s)	485, 796
TspDTI	ATGAA	6 cut(s)	111, 176, 297, 554, 594, 798
TspGWI	ACGGA	2 cut(s)	235, 309
TspRI	CASTG	2 cut(s)	370, 762
VneI	GTGCAC	1 cut(s)	40
VpaK11BI	GGWCC	2 cut(s)	231, 262
XapI	RAATTY	1 cut(s)	532
XspI	CTAG	1 cut(s)	638

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.