Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0017149

Physical Location & Seq

Genomic Coordinates Reverse (-)

16684938 .. 16686584

Gene Structure 1647 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G209700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 963 bp

ATGGGGTGGGCAATAGCACTCCACGGCGGTGCAGGCGACATCCCGCTCTCCCTGCCGCCGGAGCGCCGCCTGCCTCGCGAGGCCGGCCTCCGCCACTGCCTCCACATCGGCGTTGAAGCTCTCAAAGCCAAGACCCCCGCTTTGGACGTCGTTGAGCTTGTGGTTCGTGAGTTAGAGAACATTCCACACTTTAATGCTGGTAAAGGGTCTGTCTTGACCACCCAAGGCACGGTTGAAATGGAAGCTTGCATCATGGATGGAACCAAGAGATGTGGAGCTGTTTCTGGGCTCACCACTGTTGTCAATCCCATATCTTTAGCAAGACTGGTCATGGAGAAAACTCCTCACATTTATCTTGCATTTGATGGAGCAGAGGCCTTTGCAAGGGAACAAGGTGTTGAGACTGTAGATTCAAGTCATTTCATTACCCCAGAGAATGTTGAGAGGCTCAAGCAGGCAAAAGAAGCCAACAGAGTGCAGATTGATTATACACAACCCCTTCACAAAGATGAGAAGAAAGAAACACCAGAAGCTGATGGGGATAGTAAACTTGGGACGGTTGGATGCGTGGCTGTCGATAGTCTCGGGAATTTAGCTTCTGCAACTTCTACTGGCGGATTAGTCAACAAGATGGTTGGTCGGATTGGGGACACACCCATCATTGGTGCAGGGACATATGCCAACAGTCTCTGTGCAGTTTCTGCCACGGGCAAAGGTGAAGCGATAATCCGTGGTACGGTTGCAAGGGATGTAGCAGCTGTTATGGAGTTCAAATATGTTTCTCTCAAAGAAGCTGCAGCTTATGTTGTGGAGGAGGGCACTCCAAAAGGCAATGTAGGTTTGGTTGCTGTATCTGCCACAGGGGAAGTGACAATGCCTTTCAATACCAATGGCATGTTTCGAGCTTGCGCTACTGAGGATGGGTATTCAGAGATTGGAATATGGCCTTCTGTGCAAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004067 GO:0004175 GO:0004190 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009627 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009814 GO:0010033 GO:0010035 GO:0012505 GO:0016787 GO:0016810 GO:0016811 GO:0019538 GO:0030163 GO:0033993 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0050896 GO:0051704 GO:0051707 GO:0070001 GO:0070011 GO:0071704 GO:0097305 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Asparaginase_2

Protein Analysis

321

Amino Acids

33.73

Weight (kDa)

5.37

Isoelectric Point (pI)

25.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017149)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08100
fragaria_vesca	FvH4_5g13420
malus_domestica	MD06G1205300.v1.1 MD06G1205500.v1.1
prunus_persica	Prupe.5G209700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0183691
rosa_laevigata	RLG00000005032
rosa_multiflora	Rmu_sc0003610.1_g000026
rosa_roxburghii	Rroxscaffold_3G00270320
rosa_rugosa	Rorug06G0459400
rosa_samantha	Rh7BG060300 Rh7DG060200
rosa_wichuraiana	Rw7G004990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	150
AccBSI	CCGCTC	1 cut(s)	46
AccII	CGCG	1 cut(s)	78
AciI	CCGC	7 cut(s)	27, 44, 56, 67, 91, 138, 615
AcsI	RAATTY	1 cut(s)	589
AcyI	GRCGYC	1 cut(s)	147
AfaI	GTAC	1 cut(s)	736
AfiI	CCNNNNNNNGG	6 cut(s)	58, 142, 229, 384, 662, 736
AgsI	TTSAA	5 cut(s)	116, 236, 414, 772, 883
AleI	CACNNNNGTG	1 cut(s)	27
Alw26I	GTCTC	3 cut(s)	395, 587, 692
AlwNI	CAGNNNCTG	3 cut(s)	533, 690, 701
Ama87I	CYCGRG	1 cut(s)	584
AoxI	GGCC	4 cut(s)	81, 85, 375, 944
ApeKI	GCWGC	3 cut(s)	755, 794, 797
ApoI	RAATTY	1 cut(s)	589
ArsI	GACNNNNNNTTYG	2 cut(s)	124, 156
AspLEI	GCGC	2 cut(s)	66, 911
AsuHPI	GGTGA	2 cut(s)	283, 728
AvaI	CYCGRG	1 cut(s)	584
BaeGI	GKGCMC	1 cut(s)	821
BanII	GRGCYC	1 cut(s)	291
BbvI	GCAGC	3 cut(s)	767, 781, 809
BccI	CCATC	6 cut(s)	251, 359, 530, 625, 665, 914
BceAI	ACGGC	1 cut(s)	40
BcoDI	GTCTC	3 cut(s)	395, 587, 692
BfmI	CTRYAG	2 cut(s)	405, 795
BfoI	RGCGCY	1 cut(s)	67
BisI	GCNGC	5 cut(s)	56, 67, 756, 795, 798
BlsI	GCNGC	5 cut(s)	57, 68, 757, 796, 799
BmeT110I	CYCGRG	1 cut(s)	584
BmiI	GGNNCC	1 cut(s)	262
BmsI	GCATC	2 cut(s)	258, 554
BpuEI	CTTGAG	1 cut(s)	434
BsaHI	GRCGYC	1 cut(s)	147
BsaJI	CCNNGG	4 cut(s)	22, 223, 705, 730
Bsc4I	CCNNNNNNNGG	6 cut(s)	58, 142, 229, 384, 662, 736
Bse118I	RCCGGY	1 cut(s)	83
Bse1I	ACTGG	2 cut(s)	330, 616
Bse3DI	GCAATG	1 cut(s)	838
BseDI	CCNNGG	4 cut(s)	22, 223, 705, 730
BseGI	GGATG	5 cut(s)	39, 262, 569, 754, 925
BseLI	CCNNNNNNNGG	6 cut(s)	58, 142, 229, 384, 662, 736
BseMI	GCAATG	1 cut(s)	838
BseMII	CTCAG	1 cut(s)	906
BseNI	ACTGG	2 cut(s)	330, 616
BseRI	GAGGAG	2 cut(s)	333, 827
BseSI	GKGCMC	1 cut(s)	821
BseXI	GCAGC	3 cut(s)	767, 781, 809
BsgI	GTGCAG	4 cut(s)	51, 497, 687, 714
Bsh1236I	CGCG	1 cut(s)	78
BshFI	GGCC	4 cut(s)	83, 87, 377, 946
BsiHKCI	CYCGRG	1 cut(s)	584
BsiSI	CCGG	2 cut(s)	59, 84
BslFI	GGGAC	3 cut(s)	568, 662, 685
BslI	CCNNNNNNNGG	6 cut(s)	58, 142, 229, 384, 662, 736
BsmAI	GTCTC	3 cut(s)	395, 587, 692
BsmFI	GGGAC	3 cut(s)	568, 662, 685
BsnI	GGCC	4 cut(s)	83, 87, 377, 946
BsoBI	CYCGRG	1 cut(s)	584
Bsp1286I	GDGCHC	2 cut(s)	291, 821
Bsp68I	TCGCGA	1 cut(s)	78
BspACI	CCGC	7 cut(s)	27, 44, 56, 67, 91, 138, 615
BspANI	GGCC	4 cut(s)	83, 87, 377, 946
BspCNI	CTCAG	1 cut(s)	907
BspFNI	CGCG	1 cut(s)	78
BspLI	GGNNCC	1 cut(s)	262
BspMAI	CTGCAG	1 cut(s)	799
BsrBI	CCGCTC	1 cut(s)	46
BsrDI	GCAATG	1 cut(s)	838
BsrFI	RCCGGY	1 cut(s)	83
BsrI	ACTGG	2 cut(s)	330, 616
BssAI	RCCGGY	1 cut(s)	83
BssECI	CCNNGG	4 cut(s)	22, 223, 705, 730
BssNI	GRCGYC	1 cut(s)	147
BssT1I	CCWWGG	1 cut(s)	223
Bst4CI	ACNGT	6 cut(s)	232, 298, 406, 559, 686, 739
BstACI	GRCGYC	1 cut(s)	147
BstAPI	GCANNNNNTGC	1 cut(s)	701
BstC8I	GCNNGC	6 cut(s)	34, 71, 85, 247, 456, 907
BstDEI	CTNAG	1 cut(s)	915
BstDSI	CCRYGG	3 cut(s)	22, 705, 730
BstENI	CCTNNNNNAGG	1 cut(s)	382
BstF5I	GGATG	5 cut(s)	39, 262, 569, 754, 925
BstFNI	CGCG	1 cut(s)	78
BstH2I	RGCGCY	1 cut(s)	67
BstHHI	GCGC	2 cut(s)	66, 911
BstMAI	GTCTC	3 cut(s)	395, 587, 692
BstNSI	RCATGY	1 cut(s)	898
BstSFI	CTRYAG	2 cut(s)	405, 795
BstSLI	GKGCMC	1 cut(s)	821
BstUI	CGCG	1 cut(s)	78
BstV1I	GCAGC	3 cut(s)	767, 781, 809
BsuRI	GGCC	4 cut(s)	83, 87, 377, 946
BtgI	CCRYGG	3 cut(s)	22, 705, 730
BtsCI	GGATG	5 cut(s)	39, 262, 569, 754, 925
BtsI	GCAGTG	1 cut(s)	94
BtsIMutI	CAGTG	2 cut(s)	94, 294
BtuMI	TCGCGA	1 cut(s)	78
Cac8I	GCNNGC	6 cut(s)	34, 71, 85, 247, 456, 907
CaiI	CAGNNNCTG	3 cut(s)	533, 690, 701
CfoI	GCGC	2 cut(s)	66, 911
Cfr10I	RCCGGY	1 cut(s)	83
Csp6I	GTAC	1 cut(s)	735
CspCI	CAANNNNNGTGG	2 cut(s)	253, 288
CviAII	CATG	3 cut(s)	253, 331, 895
CviQI	GTAC	1 cut(s)	735
DdeI	CTNAG	1 cut(s)	915
EciI	GGCGGA	2 cut(s)	80, 630
Eco130I	CCWWGG	1 cut(s)	223
Eco147I	AGGCCT	1 cut(s)	377
Eco24I	GRGCYC	1 cut(s)	291
Eco88I	CYCGRG	1 cut(s)	584
EcoNI	CCTNNNNNAGG	1 cut(s)	382
EcoT14I	CCWWGG	1 cut(s)	223
EcoT38I	GRGCYC	1 cut(s)	291
ErhI	CCWWGG	1 cut(s)	223
FaeI	CATG	3 cut(s)	256, 334, 898
FaqI	GGGAC	3 cut(s)	568, 662, 685
FatI	CATG	3 cut(s)	252, 330, 894
FauI	CCCGC	2 cut(s)	51, 145
FauNDI	CATATG	1 cut(s)	676
Fnu4HI	GCNGC	5 cut(s)	56, 67, 756, 795, 798
FokI	GGATG	5 cut(s)	26, 269, 576, 761, 932
FriOI	GRGCYC	1 cut(s)	291
FseI	GGCCGGCC	1 cut(s)	87
Fsp4HI	GCNGC	5 cut(s)	56, 67, 756, 795, 798
GlaI	GCGC	2 cut(s)	65, 910
GluI	GCNGC	5 cut(s)	56, 67, 756, 795, 798
HaeII	RGCGCY	1 cut(s)	67
HaeIII	GGCC	4 cut(s)	83, 87, 377, 946
HapII	CCGG	2 cut(s)	59, 84
HhaI	GCGC	2 cut(s)	66, 911
Hin1I	GRCGYC	1 cut(s)	147
Hin1II	CATG	3 cut(s)	256, 334, 898
Hin6I	GCGC	2 cut(s)	64, 909
HinP1I	GCGC	2 cut(s)	64, 909
HincII	GTYRAC	1 cut(s)	625
HindII	GTYRAC	1 cut(s)	625
HindIII	AAGCTT	1 cut(s)	243
HinfI	GANTC	1 cut(s)	410
HpaII	CCGG	2 cut(s)	59, 84
HphI	GGTGA	2 cut(s)	283, 728
Hpy166II	GTNNAC	2 cut(s)	548, 625
Hpy188I	TCNGA	2 cut(s)	642, 931
Hpy188III	TCNNGA	4 cut(s)	77, 167, 214, 586
Hpy8I	GTNNAC	2 cut(s)	548, 625
Hpy99I	CGWCG	1 cut(s)	152
HpyAV	CCTTC	2 cut(s)	509, 957
HpyCH4III	ACNGT	6 cut(s)	232, 298, 406, 559, 686, 739
HpyCH4IV	ACGT	1 cut(s)	147
HpyF3I	CTNAG	1 cut(s)	915
HpySE526I	ACGT	1 cut(s)	147
Hsp92I	GRCGYC	1 cut(s)	147
Hsp92II	CATG	3 cut(s)	256, 334, 898
HspAI	GCGC	2 cut(s)	64, 909
KroI	GCCGGC	1 cut(s)	83
KroNI	GCCGGC	1 cut(s)	85
LmnI	GCTCC	3 cut(s)	61, 275, 368
Lsp1109I	GCAGC	3 cut(s)	767, 781, 809
LweI	GCATC	2 cut(s)	258, 554
MaeII	ACGT	1 cut(s)	147
MaeIII	GTNAC	1 cut(s)	868
MbiI	CCGCTC	1 cut(s)	46
MboII	GAAGA	1 cut(s)	526
MhlI	GDGCHC	2 cut(s)	291, 821
MluCI	AATT	2 cut(s)	589, 958
MmeI	TCCRAC	2 cut(s)	541, 620
MroNI	GCCGGC	1 cut(s)	83
MseI	TTAA	1 cut(s)	192
MslI	CAYNNNNRTG	3 cut(s)	27, 192, 507
MspA1I	CMGCKG	1 cut(s)	758
MspI	CCGG	2 cut(s)	59, 84
MvnI	CGCG	1 cut(s)	78
NaeI	GCCGGC	1 cut(s)	85
NdeI	CATATG	1 cut(s)	676
NgoMIV	GCCGGC	1 cut(s)	83
NlaIII	CATG	3 cut(s)	256, 334, 898
NlaIV	GGNNCC	1 cut(s)	262
NmuCI	GTSAC	1 cut(s)	868
NruI	TCGCGA	1 cut(s)	78
NspI	RCATGY	1 cut(s)	898
OliI	CACNNNNGTG	1 cut(s)	27
PceI	AGGCCT	1 cut(s)	377
PdiI	GCCGGC	1 cut(s)	85
PfeI	GAWTC	1 cut(s)	410
PkrI	GCNGC	5 cut(s)	57, 68, 757, 796, 799
PspN4I	GGNNCC	1 cut(s)	262
PstI	CTGCAG	1 cut(s)	799
PstNI	CAGNNNCTG	3 cut(s)	533, 690, 701
PvuII	CAGCTG	1 cut(s)	758
RigI	GGCCGGCC	1 cut(s)	87
RruI	TCGCGA	1 cut(s)	78
RsaI	GTAC	1 cut(s)	736
RsaNI	GTAC	1 cut(s)	735
RseI	CAYNNNNRTG	3 cut(s)	27, 192, 507
SaqAI	TTAA	1 cut(s)	192
SatI	GCNGC	5 cut(s)	56, 67, 756, 795, 798
SduI	GDGCHC	2 cut(s)	291, 821
SfaNI	GCATC	2 cut(s)	258, 554
SfcI	CTRYAG	2 cut(s)	405, 795
SmiMI	CAYNNNNRTG	3 cut(s)	27, 192, 507
SmlI	CTYRAG	1 cut(s)	449
SmoI	CTYRAG	1 cut(s)	449
Sse9I	AATT	2 cut(s)	589, 958
SseBI	AGGCCT	1 cut(s)	377
SsiI	CCGC	7 cut(s)	27, 44, 56, 67, 91, 138, 615
StuI	AGGCCT	1 cut(s)	377
StyI	CCWWGG	1 cut(s)	223
TaaI	ACNGT	6 cut(s)	232, 298, 406, 559, 686, 739
TaiI	ACGT	1 cut(s)	150
TaqI	TCGA	2 cut(s)	576, 901
TasI	AATT	2 cut(s)	589, 958
TauI	GCSGC	2 cut(s)	58, 69
TfiI	GAWTC	1 cut(s)	410
Tru1I	TTAA	1 cut(s)	192
Tru9I	TTAA	1 cut(s)	192
TscAI	CASTG	2 cut(s)	101, 301
TseFI	GTSAC	1 cut(s)	868
TseI	GCWGC	3 cut(s)	755, 794, 797
Tsp45I	GTSAC	1 cut(s)	868
TspDTI	ATGAA	1 cut(s)	412
TspGWI	ACGGA	1 cut(s)	719
TspRI	CASTG	2 cut(s)	101, 301
XagI	CCTNNNNNAGG	1 cut(s)	382
XapI	RAATTY	1 cut(s)	589
XceI	RCATGY	1 cut(s)	898
ZraI	GACGTC	1 cut(s)	148

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.