Prupe.5G236500_v2.0.a1

NF-X1-type zinc finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0012624
Physical Location & Seq
Forward (+)
17893778 .. 17898671
4894 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G236500.4

Sequence Viewer

Length: 2529 bp
ATGGATCCTCAGCTCGGTTCTGCTAACCAGTTCAAGGAGACATGGAAGCATACGCTTCTTTTGTCATTTCAGAGCCTTGGAGTAATTTATGGTCAACTGAGTACTGCTCCCTTATATGTCTTTGGGACAATGAATGCAGAAGATATCAAATCAGAGGAGACTGTTTATGAACTATTCTCCTGTATTTTCTGGACTATTAACATCATTTCTTTACTCAAGTATGCCTTTATAGTATTAAGAGCTGATGACAATGGAGAAGGTGGTACTTTTGCTTTGTATTCACTCCTGTGTAGGCATGCTAAAGTGGGTCTGCTTCCAAATGACACAAGTGCTAATGAGGTTATGCATTATGAGACGGGAAGTCCTTTCAAGATAAAGGTGGAATCAAGGGCTAGAAGAGCCATTGAGAAACATAAAAGTAGCCACTATTTAATGTTGTTCCTTGCTCTGTTCGGTTCCTGCATGACGATCGGTGTTGGGGTGCTTACCCCAGCTCTATCTGTGTATTCAGTTTCATCGGGTGTTCAAAGATCAATGTCAGATATGGCACACTTATTTTCATCTTCACCAAGAAAACAGGAGGCCATATCAAATGCTTTTGAGAAATGTGAGTACTTTGTCATCAAAGGCACTCTTGCACACATGTCCAGTAAAATGGAAAGCAAAGAAACCGGAGAAACTAAAAGGAGAAATACACACTGCACCTGGAAAATAAACACAACACATTCTGAGCCTGTCAATCATGATGGCCAAAGTTTATCTGATGTACCAGTTCCAACGGCATCTGCTATATTGGTGTGCCTCTTCACACTACAACACTATGGGACTCATAAAATTGGGTTTATTTTTGCTCCAATTATTGTCATTTGGCTGATATTTATCGGTGGAGGCGGTATATATAACATTTTCCACTGGAACAAACAAATTATCCATGCTGTCTCCCCGATGTACATGTACAGATTTGTTAAGAACATTGAAATCAAAAGTTGGAGGTCTCTAGGCAGCATCGTTTTGTGTGTAGCAGGATCAGAGGCAATGTTTGCAGATCTAGGTCATTTCAGAAAGAAATCGATCAAGATTACATTTGTATGCTTGATTTATCCAGTCCTTGTTTTATGCTATGCCGGCCAGGCTGCATATATCTCCAAAAACTTGCATGCTGCAGATTTCAATCATCTCAGTGAATCCATCCCCCACCGAATTCGCCACTGGTTCATAGCATTATCCCTTCTTGCTTCAGTTGTGGGAAGCCAAGCAACCATAACAGCCAGTTTTTCCATCATAAATCAGTGCCTAGCACTTGGTTGTTTCCCCAGAGTAAAAGTTATTCATACATCAGATAAGATACATGGGCAGGTTTACATTCCTGATATCAACTGGCTATTGATGGTTCTAAGCCTCGCTGTTACAATTGGTTTCCATGATATTATGAGAATTGGTTCTGCCACAGGTTTGGCCGTAATTTCTGGAATGCTCGTAACGACTTGTCTCATGTCACTCGTAATTGCCCTGTACTGGGAGAAGAATTTGTTTGAATCTGTCTGTTGTCTGATATTCTTTGGATCCATTGAGGTAATGTATGTATCAGCTTGTATGTTGAATTTCCATAAGGGAGCTTGGTATTTGGTTGTCCTTTTGGCATTGTCCTTGACAGTCATGCTTTCATGGCATTATGGAACCAAGAAGAAGCTCGAATTTGACTTACAAAACAAGGTATCTGCAGAATGGCTTACTGATATTAGCCCAGGCCTAGGGGTTACCAGGGTTCCTGGCATTGGTTTCATTTATACTGATATAGTGACAGGAATTCCAGCTTTCTTCTCACACTTCATTACCAACCTTCCTGCATTTCACCAAGTTTTGATCTTCGTGTCGTTCAAGTCCCTACCGATGCCTTACGTCCCTGCAAGTCGGAGGTATCTTATTGGCAGGGTTGGCCCAAAAGATTTGAAGATTTATCGGTGTGTCGTGAGATATGGATACTGTGATCCTATTAGGGACACTGATAATTTTGAAGAACAGATTATTAGTTCAATCGGAGAGTTCATTACCATGGAAGAAAATGAGTTTGAATCCCTGAATTCATCAGAAGGAAGAATGGTGGTTGTTGGAAAGCCACCAGCTGATGGAAGCGCTTTGATTCCATTGAATGAAACAAACTCAGATGAGGAGTCTGTGAGCTTGGTGAGCAATATTGAAACTCAGCTAGCTCCAATGGTGGCCGATGCAGTGGAGAGTGGTTTGGGTTCAGTGATGAGAAAAAAGGTGCGGTTCATGTTGCCCGCGAAGAGTCCGAAAATGCGAGCATCTGTTAGGGATGAGCTGCAAGAACTAATAGATGCAAGGGAGAGTGGCACAGCGTACTTCCTGGGGCAGGTGCATTTAGCAGTGCGTGATGGCTCAGACGTGTTGAAGCGCTTGCTGATCATGACTTATGCGTTTTGTGATAAAAATTGCAGAGAGCCTCCAGTTGCTCTCAACATTCCTCATGCCGCTCTTGTCGAGGTTGGTATGGTCTGTTGCATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000122 GO:0000976 GO:0000977 GO:0000981 GO:0000982 GO:0001012 GO:0001067 GO:0001078 GO:0001227 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006082 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009636 GO:0009642 GO:0009651 GO:0009696 GO:0009697 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010188 GO:0010310 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010817 GO:0016053 GO:0016070 GO:0016999 GO:0017000 GO:0017144 GO:0018130 GO:0018958 GO:0019219 GO:0019222 GO:0019438 GO:0019752 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032774 GO:0032787 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0042445 GO:0042446 GO:0042537 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0046189 GO:0046394 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051193 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0098542 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901615 GO:1901617 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:2000112 GO:2000113 GO:2000377 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko05165 map05165
Pfam Domains
Protein Families
K_trans R3H zf-NF-X1

Protein Analysis

843

Amino Acids

93.71

Weight (kDa)

7.96

Isoelectric Point (pI)

41.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2365
Acc36I ACCTGC 2 cut(s) 1345, 2365
AccB7I CCANNNNNTGG 1 cut(s) 2126
AccBSI CCGCTC 1 cut(s) 2495
AccII CGCG 1 cut(s) 2285
AciI CCGC 4 cut(s) 891, 2269, 2283, 2493
AclWI GGATC 5 cut(s) 12, 1033, 1557, 1570, 1982
AcoI YGGCCR 4 cut(s) 748, 1126, 1455, 2220
AcsI RAATTY 6 cut(s) 1200, 1525, 1600, 1694, 1806, 2080
AcuI CTGAAG 1 cut(s) 1221
AfaI GTAC 8 cut(s) 103, 265, 614, 768, 950, 956, 1514, 2363
AfeI AGCGCT 2 cut(s) 2134, 2417
AfiI CCNNNNNNNGG 8 cut(s) 14, 34, 1515, 1516, 1751, 1775, 2126, 2374
AflIII ACRYGT 3 cut(s) 642, 951, 2406
AhdI GACNNNNNGTC 1 cut(s) 360
AjiI CACGTC 1 cut(s) 2407
AjnI CCWGG 6 cut(s) 704, 1128, 1744, 1760, 1768, 2367
AleI CACNNNNGTG 1 cut(s) 286
Alw26I GTCTC 6 cut(s) 32, 152, 347, 943, 999, 1493
AlwI GGATC 5 cut(s) 12, 1033, 1557, 1570, 1982
Aor51HI AGCGCT 2 cut(s) 2134, 2417
AoxI GGCC 7 cut(s) 582, 748, 1126, 1455, 1747, 1936, 2220
ApeKI GCWGC 4 cut(s) 1002, 1133, 1160, 2323
ApoI RAATTY 6 cut(s) 1200, 1525, 1600, 1694, 1806, 2080
Asp700I GAANNNNTTC 1 cut(s) 1438
AspA2I CCTAGG 1 cut(s) 1750
AspLEI GCGC 2 cut(s) 2135, 2418
AspS9I GGNCC 1 cut(s) 1937
AsuHPI GGTGA 3 cut(s) 558, 1844, 2197
AsuNHI GCTAGC 1 cut(s) 2206
AvrII CCTAGG 1 cut(s) 1750
BalI TGGCCA 1 cut(s) 750
BamHI GGATCC 2 cut(s) 4, 1562
BbvCI CCTCAGC 1 cut(s) 9
BbvI GCAGC 4 cut(s) 1014, 1120, 1147, 2310
BccI CCATC 6 cut(s) 740, 1196, 1286, 1381, 2120, 2390
BceAI ACGGC 2 cut(s) 795, 1442
BcgI CGANNNNNNTGC 2 cut(s) 451, 485
BciT130I CCWGG 6 cut(s) 706, 1130, 1746, 1762, 1770, 2369
BciVI GTATCC 1 cut(s) 1973
BclI TGATCA 1 cut(s) 2424
BcoDI GTCTC 6 cut(s) 32, 152, 347, 943, 999, 1493
BfaI CTAG 6 cut(s) 393, 998, 1049, 1295, 1751, 2207
BfmI CTRYAG 2 cut(s) 1161, 1719
BfoI RGCGCY 2 cut(s) 2136, 2419
BfuAI ACCTGC 2 cut(s) 1345, 2365
BfuI GTATCC 1 cut(s) 1973
BglI GCCNNNNNGGC 1 cut(s) 1130
BglII AGATCT 1 cut(s) 1045
BisI GCNGC 5 cut(s) 1003, 1134, 1161, 2324, 2493
BlnI CCTAGG 1 cut(s) 1750
BlsI GCNGC 5 cut(s) 1004, 1135, 1162, 2325, 2494
BmcAI AGTACT 2 cut(s) 103, 614
Bme1390I CCNGG 6 cut(s) 706, 1130, 1746, 1762, 1770, 2369
BmeRI GACNNNNNGTC 1 cut(s) 360
BmgBI CACGTC 1 cut(s) 2407
BmgT120I GGNCC 1 cut(s) 1937
BmiI GGNNCC 5 cut(s) 6, 457, 1564, 1678, 1767
BmrFI CCNGG 6 cut(s) 706, 1130, 1746, 1762, 1770, 2369
BmrI ACTGGG 1 cut(s) 1525
BmsI GCATC 6 cut(s) 791, 1014, 1881, 2215, 2315, 2329
BmtI GCTAGC 1 cut(s) 2210
BmuI ACTGGG 1 cut(s) 1525
BplI GAGNNNNNCTC 2 cut(s) 91, 123
BpmI CTGGAG 1 cut(s) 2451
Bpu10I CCTNAGC 1 cut(s) 9
BpuEI CTTGAG 1 cut(s) 200
Bsa29I ATCGAT 1 cut(s) 1070
BsaBI GATNNNNATC 2 cut(s) 878, 1170
BsaI GGTCTC 1 cut(s) 999
BsaJI CCNNGG 6 cut(s) 76, 1744, 1750, 1761, 2052, 2368
BsaWI WCCGGW 1 cut(s) 671
Bsc4I CCNNNNNNNGG 8 cut(s) 14, 34, 1515, 1516, 1751, 1775, 2126, 2374
Bse118I RCCGGY 1 cut(s) 1124
Bse3DI GCAATG 1 cut(s) 1041
Bse8I GATNNNNATC 2 cut(s) 878, 1170
BseBI CCWGG 6 cut(s) 706, 1130, 1746, 1762, 1770, 2369
BseCI ATCGAT 1 cut(s) 1070
BseDI CCNNGG 6 cut(s) 76, 1744, 1750, 1761, 2052, 2368
BseGI GGATG 2 cut(s) 1188, 2323
BseJI GATNNNNATC 2 cut(s) 878, 1170
BseLI CCNNNNNNNGG 8 cut(s) 14, 34, 1515, 1516, 1751, 1775, 2126, 2374
BseMI GCAATG 1 cut(s) 1041
BseMII CTCAG 7 cut(s) 23, 89, 720, 1192, 2175, 2216, 2415
BseRI GAGGAG 2 cut(s) 170, 2183
BseXI GCAGC 4 cut(s) 1014, 1120, 1147, 2310
BseYI CCCAGC 1 cut(s) 490
BsgI GTGCAG 1 cut(s) 685
Bsh1236I CGCG 1 cut(s) 2285
Bsh1285I CGRYCG 1 cut(s) 471
BshFI GGCC 7 cut(s) 584, 750, 1128, 1457, 1749, 1938, 2222
BshVI ATCGAT 1 cut(s) 1070
BsiEI CGRYCG 1 cut(s) 471
BsiSI CCGG 2 cut(s) 672, 1125
BslFI GGGAC 5 cut(s) 139, 838, 1867, 1886, 2012
BslI CCNNNNNNNGG 8 cut(s) 14, 34, 1515, 1516, 1751, 1775, 2126, 2374
BsmAI GTCTC 6 cut(s) 32, 152, 347, 943, 999, 1493
BsmBI CGTCTC 1 cut(s) 347
BsmFI GGGAC 5 cut(s) 139, 838, 1867, 1886, 2012
BsmI GAATGC 2 cut(s) 139, 1476
BsnI GGCC 7 cut(s) 584, 750, 1128, 1457, 1749, 1938, 2222
Bso31I GGTCTC 1 cut(s) 999
Bsp1407I TGTACA 2 cut(s) 948, 954
Bsp19I CCATGG 1 cut(s) 2052
BspACI CCGC 4 cut(s) 891, 2269, 2283, 2493
BspANI GGCC 7 cut(s) 584, 750, 1128, 1457, 1749, 1938, 2222
BspCNI CTCAG 7 cut(s) 22, 90, 721, 1191, 2174, 2215, 2414
BspDI ATCGAT 1 cut(s) 1070
BspFNI CGCG 1 cut(s) 2285
BspHI TCATGA 2 cut(s) 742, 2427
BspLI GGNNCC 5 cut(s) 6, 457, 1564, 1678, 1767
BspMAI CTGCAG 2 cut(s) 1165, 1723
BspMI ACCTGC 2 cut(s) 1345, 2365
BspOI GCTAGC 1 cut(s) 2210
BspPI GGATC 5 cut(s) 12, 1033, 1557, 1570, 1982
BspQI GCTCTTC 1 cut(s) 391
BspTNI GGTCTC 1 cut(s) 999
BsrBI CCGCTC 1 cut(s) 2495
BsrDI GCAATG 1 cut(s) 1041
BsrFI RCCGGY 1 cut(s) 1124
BsrGI TGTACA 2 cut(s) 948, 954
BssAI RCCGGY 1 cut(s) 1124
BssECI CCNNGG 6 cut(s) 76, 1744, 1750, 1761, 2052, 2368
BssT1I CCWWGG 3 cut(s) 76, 1750, 2052
Bst2UI CCWGG 6 cut(s) 706, 1130, 1746, 1762, 1770, 2369
Bst4CI ACNGT 3 cut(s) 163, 1654, 1985
Bst6I CTCTTC 3 cut(s) 391, 809, 2282
BstAPI GCANNNNNTGC 1 cut(s) 1040
BstAUI TGTACA 2 cut(s) 948, 954
BstC8I GCNNGC 7 cut(s) 297, 1126, 1158, 2208, 2283, 2304, 2420
BstDEI CTNAG 8 cut(s) 9, 98, 729, 1178, 1394, 2161, 2202, 2401
BstDSI CCRYGG 1 cut(s) 2052
BstEII GGTNACC 1 cut(s) 1756
BstENI CCTNNNNNAGG 1 cut(s) 2372
BstF5I GGATG 2 cut(s) 1188, 2323
BstFNI CGCG 1 cut(s) 2285
BstH2I RGCGCY 2 cut(s) 2136, 2419
BstHHI GCGC 2 cut(s) 2135, 2418
BstMAI GTCTC 6 cut(s) 32, 152, 347, 943, 999, 1493
BstMCI CGRYCG 1 cut(s) 471
BstMWI GCNNNNNNNGC 7 cut(s) 398, 1040, 1125, 1130, 1666, 1935, 2187
BstNI CCWGG 6 cut(s) 706, 1130, 1746, 1762, 1770, 2369
BstNSI RCATGY 4 cut(s) 299, 646, 955, 1160
BstPI GGTNACC 1 cut(s) 1756
BstSCI CCNGG 6 cut(s) 704, 1128, 1744, 1760, 1768, 2367
BstSFI CTRYAG 2 cut(s) 1161, 1719
BstUI CGCG 1 cut(s) 2285
BstV1I GCAGC 4 cut(s) 1014, 1120, 1147, 2310
BstX2I RGATCY 3 cut(s) 4, 1045, 1562
BstXI CCANNNNNNTGG 2 cut(s) 655, 1453
BstYI RGATCY 3 cut(s) 4, 1045, 1562
Bsu15I ATCGAT 1 cut(s) 1070
BsuI GTATCC 1 cut(s) 1973
BsuRI GGCC 7 cut(s) 584, 750, 1128, 1457, 1749, 1938, 2222
BsuTUI ATCGAT 1 cut(s) 1070
BtgI CCRYGG 1 cut(s) 2052
BtrI CACGTC 1 cut(s) 2407
BtsCI GGATG 2 cut(s) 1188, 2323
BtsI GCAGTG 3 cut(s) 697, 2235, 2394
BtsIMutI CAGTG 9 cut(s) 697, 910, 1186, 1207, 1295, 2001, 2235, 2256, 2394
BveI ACCTGC 2 cut(s) 1345, 2365
Cac8I GCNNGC 7 cut(s) 297, 1126, 1158, 2208, 2283, 2304, 2420
CciI TCATGA 2 cut(s) 742, 2427
CfoI GCGC 2 cut(s) 2135, 2418
Cfr10I RCCGGY 1 cut(s) 1124
Cfr13I GGNCC 1 cut(s) 1937
ClaI ATCGAT 1 cut(s) 1070
Csp6I GTAC 8 cut(s) 102, 264, 613, 767, 949, 955, 1513, 2362
CviQI GTAC 8 cut(s) 102, 264, 613, 767, 949, 955, 1513, 2362
DdeI CTNAG 8 cut(s) 9, 98, 729, 1178, 1394, 2161, 2202, 2401
DriI GACNNNNNGTC 1 cut(s) 360
EaeI YGGCCR 4 cut(s) 748, 1126, 1455, 2220
Eam1104I CTCTTC 3 cut(s) 391, 809, 2282
Eam1105I GACNNNNNGTC 1 cut(s) 360
EarI CTCTTC 3 cut(s) 391, 809, 2282
Eco130I CCWWGG 3 cut(s) 76, 1750, 2052
Eco147I AGGCCT 1 cut(s) 1749
Eco31I GGTCTC 1 cut(s) 999
Eco32I GATATC 2 cut(s) 145, 1372
Eco47III AGCGCT 2 cut(s) 2134, 2417
Eco57I CTGAAG 1 cut(s) 1221
Eco91I GGTNACC 1 cut(s) 1756
EcoNI CCTNNNNNAGG 1 cut(s) 2372
EcoO65I GGTNACC 1 cut(s) 1756
EcoRI GAATTC 3 cut(s) 1200, 1806, 2080
EcoRII CCWGG 6 cut(s) 704, 1128, 1744, 1760, 1768, 2367
EcoRV GATATC 2 cut(s) 145, 1372
EcoT14I CCWWGG 3 cut(s) 76, 1750, 2052
EcoT22I ATGCAT 1 cut(s) 348
ErhI CCWWGG 3 cut(s) 76, 1750, 2052
Esp3I CGTCTC 1 cut(s) 347
FalI AAGNNNNNCTT 4 cut(s) 209, 241, 618, 650
FaqI GGGAC 5 cut(s) 139, 838, 1867, 1886, 2012
FauI CCCGC 1 cut(s) 2290
FbaI TGATCA 1 cut(s) 2424
Fnu4HI GCNGC 5 cut(s) 1003, 1134, 1161, 2324, 2493
FokI GGATG 2 cut(s) 1175, 2330
Fsp4HI GCNGC 5 cut(s) 1003, 1134, 1161, 2324, 2493
FspBI CTAG 6 cut(s) 393, 998, 1049, 1295, 1751, 2207
GlaI GCGC 2 cut(s) 2134, 2417
GluI GCNGC 5 cut(s) 1003, 1134, 1161, 2324, 2493
GsaI CCCAGC 1 cut(s) 494
GsuI CTGGAG 1 cut(s) 2451
HaeII RGCGCY 2 cut(s) 2136, 2419
HaeIII GGCC 7 cut(s) 584, 750, 1128, 1457, 1749, 1938, 2222
HapII CCGG 2 cut(s) 672, 1125
HhaI GCGC 2 cut(s) 2135, 2418
Hin6I GCGC 2 cut(s) 2133, 2416
HinP1I GCGC 2 cut(s) 2133, 2416
HincII GTYRAC 1 cut(s) 95
HindII GTYRAC 1 cut(s) 95
HinfI GANTC 8 cut(s) 383, 826, 1184, 1535, 2072, 2140, 2171, 2290
HpaII CCGG 2 cut(s) 672, 1125
HphI GGTGA 3 cut(s) 558, 1844, 2197
Hpy166II GTNNAC 2 cut(s) 95, 1360
Hpy188III TCNNGA 8 cut(s) 190, 370, 743, 1075, 1367, 1467, 1969, 2428
Hpy8I GTNNAC 2 cut(s) 95, 1360
HpyAV CCTTC 4 cut(s) 251, 1238, 1850, 2084
HpyCH4III ACNGT 3 cut(s) 163, 1654, 1985
HpyCH4IV ACGT 2 cut(s) 1899, 2406
HpyF10VI GCNNNNNNNGC 7 cut(s) 398, 1040, 1125, 1130, 1666, 1935, 2187
HpyF3I CTNAG 8 cut(s) 9, 98, 729, 1178, 1394, 2161, 2202, 2401
HpySE526I ACGT 2 cut(s) 1899, 2406
HspAI GCGC 2 cut(s) 2133, 2416
KroI GCCGGC 1 cut(s) 1124
KroNI GCCGGC 1 cut(s) 1126
Ksp22I TGATCA 1 cut(s) 2424
LguI GCTCTTC 1 cut(s) 391
LmnI GCTCC 4 cut(s) 112, 856, 1613, 2215
Lsp1109I GCAGC 4 cut(s) 1014, 1120, 1147, 2310
LweI GCATC 6 cut(s) 791, 1014, 1881, 2215, 2315, 2329
MaeI CTAG 6 cut(s) 393, 998, 1049, 1295, 1751, 2207
MaeII ACGT 2 cut(s) 1899, 2406
MaeIII GTNAC 5 cut(s) 1405, 1477, 1494, 1756, 1798
MbiI CCGCTC 1 cut(s) 2495
MfeI CAATTG 1 cut(s) 1410
MflI RGATCY 3 cut(s) 4, 1045, 1562
MlsI TGGCCA 1 cut(s) 750
MluNI TGGCCA 1 cut(s) 750
MlyI GAGTC 3 cut(s) 820, 2180, 2299
MmeI TCCRAC 4 cut(s) 800, 968, 1892, 2089
Mox20I TGGCCA 1 cut(s) 750
Mph1103I ATGCAT 1 cut(s) 348
MroNI GCCGGC 1 cut(s) 1124
MroXI GAANNNNTTC 1 cut(s) 1438
MscI TGGCCA 1 cut(s) 750
MseI TTAA 4 cut(s) 198, 236, 431, 966
MslI CAYNNNNRTG 4 cut(s) 286, 1087, 1179, 2051
Msp20I TGGCCA 1 cut(s) 750
MspA1I CMGCKG 1 cut(s) 2123
MspI CCGG 2 cut(s) 672, 1125
MspR9I CCNGG 6 cut(s) 706, 1130, 1746, 1762, 1770, 2369
MunI CAATTG 1 cut(s) 1410
Mva1269I GAATGC 2 cut(s) 139, 1476
MvaI CCWGG 6 cut(s) 706, 1130, 1746, 1762, 1770, 2369
MvnI CGCG 1 cut(s) 2285
MwoI GCNNNNNNNGC 7 cut(s) 398, 1040, 1125, 1130, 1666, 1935, 2187
NaeI GCCGGC 1 cut(s) 1126
NcoI CCATGG 1 cut(s) 2052
NgoMIV GCCGGC 1 cut(s) 1124
NheI GCTAGC 1 cut(s) 2206
NlaIV GGNNCC 5 cut(s) 6, 457, 1564, 1678, 1767
NmuCI GTSAC 2 cut(s) 1494, 1798
NsiI ATGCAT 1 cut(s) 348
NspI RCATGY 4 cut(s) 299, 646, 955, 1160
OliI CACNNNNGTG 1 cut(s) 286
PaeI GCATGC 2 cut(s) 299, 1160
PagI TCATGA 2 cut(s) 742, 2427
PaqCI CACCTGC 1 cut(s) 2365
PceI AGGCCT 1 cut(s) 1749
PciI ACATGT 2 cut(s) 642, 951
PciSI GCTCTTC 1 cut(s) 391
PctI GAATGC 2 cut(s) 139, 1476
PdiI GCCGGC 1 cut(s) 1126
PdmI GAANNNNTTC 1 cut(s) 1438
PfeI GAWTC 5 cut(s) 383, 1184, 1535, 2072, 2140
PflMI CCANNNNNTGG 1 cut(s) 2126
PkrI GCNGC 5 cut(s) 1004, 1135, 1162, 2325, 2494
Ple19I CGATCG 1 cut(s) 471
PleI GAGTC 3 cut(s) 820, 2179, 2298
PpsI GAGTC 3 cut(s) 820, 2179, 2298
PscI ACATGT 2 cut(s) 642, 951
Psp6I CCWGG 6 cut(s) 704, 1128, 1744, 1760, 1768, 2367
PspEI GGTNACC 1 cut(s) 1756
PspFI CCCAGC 1 cut(s) 490
PspGI CCWGG 6 cut(s) 704, 1128, 1744, 1760, 1768, 2367
PspN4I GGNNCC 5 cut(s) 6, 457, 1564, 1678, 1767
PspPI GGNCC 1 cut(s) 1937
PstI CTGCAG 2 cut(s) 1165, 1723
PsuI RGATCY 3 cut(s) 4, 1045, 1562
PvuI CGATCG 1 cut(s) 471
PvuII CAGCTG 1 cut(s) 2123
RsaI GTAC 8 cut(s) 103, 265, 614, 768, 950, 956, 1514, 2363
RsaNI GTAC 8 cut(s) 102, 264, 613, 767, 949, 955, 1513, 2362
RseI CAYNNNNRTG 4 cut(s) 286, 1087, 1179, 2051
SapI GCTCTTC 1 cut(s) 391
SaqAI TTAA 4 cut(s) 198, 236, 431, 966
SatI GCNGC 5 cut(s) 1003, 1134, 1161, 2324, 2493
Sau96I GGNCC 1 cut(s) 1937
ScaI AGTACT 2 cut(s) 103, 614
SchI GAGTC 3 cut(s) 820, 2180, 2299
ScrFI CCNGG 6 cut(s) 706, 1130, 1746, 1762, 1770, 2369
SfaNI GCATC 6 cut(s) 791, 1014, 1881, 2215, 2315, 2329
SfcI CTRYAG 2 cut(s) 1161, 1719
SmiMI CAYNNNNRTG 4 cut(s) 286, 1087, 1179, 2051
SmlI CTYRAG 1 cut(s) 215
SmoI CTYRAG 1 cut(s) 215
SphI GCATGC 2 cut(s) 299, 1160
SseBI AGGCCT 1 cut(s) 1749
SsiI CCGC 4 cut(s) 891, 2269, 2283, 2493
SspI AATATT 1 cut(s) 2194
SspMI CTAG 6 cut(s) 393, 998, 1049, 1295, 1751, 2207
StuI AGGCCT 1 cut(s) 1749
StyD4I CCNGG 6 cut(s) 704, 1128, 1744, 1760, 1768, 2367
StyI CCWWGG 3 cut(s) 76, 1750, 2052
TaaI ACNGT 3 cut(s) 163, 1654, 1985
TaiI ACGT 2 cut(s) 1902, 2409
TaqI TCGA 3 cut(s) 1070, 1692, 2502
TatI WGTACW 5 cut(s) 101, 612, 948, 954, 1512
TauI GCSGC 1 cut(s) 2495
TfiI GAWTC 5 cut(s) 383, 1184, 1535, 2072, 2140
Tru1I TTAA 4 cut(s) 198, 236, 431, 966
Tru9I TTAA 4 cut(s) 198, 236, 431, 966
TscAI CASTG 9 cut(s) 704, 917, 1186, 1214, 1295, 2008, 2235, 2256, 2394
TseFI GTSAC 2 cut(s) 1494, 1798
TseI GCWGC 4 cut(s) 1002, 1133, 1160, 2323
Tsp45I GTSAC 2 cut(s) 1494, 1798
TspRI CASTG 9 cut(s) 704, 917, 1186, 1214, 1295, 2008, 2235, 2256, 2394
Van91I CCANNNNNTGG 1 cut(s) 2126
XagI CCTNNNNNAGG 1 cut(s) 2372
XapI RAATTY 6 cut(s) 1200, 1525, 1600, 1694, 1806, 2080
XceI RCATGY 4 cut(s) 299, 646, 955, 1160
XmaJI CCTAGG 1 cut(s) 1750
XmnI GAANNNNTTC 1 cut(s) 1438
XspI CTAG 6 cut(s) 393, 998, 1049, 1295, 1751, 2207
ZrmI AGTACT 2 cut(s) 103, 614
Zsp2I ATGCAT 1 cut(s) 348
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.