Rh7CG011700

NF-X1-type zinc finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0012624
Physical Location & Seq
Reverse (-)
901815 .. 905869
4055 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG011700.1

Sequence Viewer

Length: 2397 bp
ATGCATTGTACAAACATGGATTGGGATTCTCAGCTCAGTCCTGCTACTTCCTCTAATCAGTTCAAGGATACATGGAAGCATACACTTCTTCTGTCATTTCAGAGCTTTGGAGTGATATATGGTCAAATGAGTACTGCTCCCTTATATGTCTTTGGGACAATTCATGCACAAGATATCAAATCGGAGGATACAGTTTATGAACTATTCTCCTTCATTTTCTGGACCATGACCATCATTACTTTACTGAAGTATGCCTGTATAGTATTAAGAGCTGATGATAATGGAGAAGGTGGTACTTTTGCTCTGTACTCACTCTTGTGTAGGCATGCCAAAGTGGGTCTACTTCCAAATGACAGAAGTGCTGATGAGGTTATGCATTATGAGAGGGAAATTCCTTTCACGATGAAGGTGGAATCGAGGGCTAAAAGAACCATTGAAAAACATAAAAGTAGTCACTATGTCATGTTGGTCCTGGCTCTGTTAGGTTCCTGCATGACAATCGGCGTTGGGGTGCTTACCCCAGCTCTTTCGGTCTATTCAGCTTCATCAGGTGTTCAAAGATCACTGTCAGACATGGCCCACCGATTTTCATCTTCGGAAAGGAAACAAGAGTCAATAGCAAAAGCTTTCAAGGATTATGTACCAGTTCCCTTGGCATCTGCTATATTGGTGTGCCTCTTCATGCTGCAGCATTGTGGGACTAGTAAAATTGGGTTTATGTTTGCTCCGATTATCATTATTTGGCTGATATGTATCGGTGGCGTGGGTATATATAATATTTTCTACTGGGACAAACAAATTGTCCATGCAATCTCTCCTGTATACATGTACAGATTTGTTAGGAACATTAACGTTGACCGTTGGAGGGCATTAGGCAGCATAGTTCTATGTGTAGCAGGGTCAGAGGCAATGTTTGCAGATCTAGGTCATTTCAGAGAGAAATCCATCAAGATTATATTTGTATGCTTGATCTATCCTGTTCTTGTTCTATGCTATGCCGGTCAGGCTGCATTTATCTCCAAAAACTTTCATGAGGATGATTACAATCATCTCAGTGAATCCTTTCCTACACCAGTTCGCGACTGGTTCATAGCATTATCCCTACTTGCTTCAGCTGTAGGAAGTCAAGCTACCATAACAGCCAGTTTCTCCATCATAAATCAGTGCCTGGCACTTGGTTGTTTTCCCAGAGTAAAAGTTATTCATACATCAGATAAGATACATGGGCAGGTTTATATTCCCGATATCAACTGGATATTGATGGTTCTATGCCTTACTGTTACAATTGGTTTTCATGATATTGAGAAAATTGGCAATGCCACAGGTTTGGCCATAATTTCTCCAATGGTTGTCACAACTTGTCTCATGTCACTGGTAATTGCCTTATACTGGGAGAAGAGTTTGTATCAATCTATCTGTTTTCTACTGTTCTTCGGCTTCATTGAGGCGATGTATGTGTCAGCTTGTATGTTGAATGTCCATAAGGGAGCTTGGTATTTGGTTTTCCTATTGGCATTGTCTTTGACTATCATGATTTCATGGCATTATGGAACCAAAAAGAAGCTCGAATTCGATTTAACAAACAAGGTGTCTGCAGAATGGCTCACAGCTATTAGTCCAGCACTAGGAGTTACCAGGGTACCTGGCATTGGTTTCATTTATACTGATATAGTCTCAGGAATTCCGGCTTTCTTCTCACACTTCATTACGAATCTTCCTGCATTTCATCAAGTTTTGATCTTTGTGTCCTTCAAGTCTCTGCCAGTTCCATATGTCCCTGCAACTCGGAGGTACCTTGTGGGAAGGATCGGGCCAAAAGATCTTAAAATATATCGTTGTGTGGTGAGATATGGATATTGTGAGCATATTAGGGACACCGATGATTTTGAGGAAGAGATTATTAGTTCCATTGGAGAATTCATTTCCGTGGAAGAAAATGACTTTGATTCCCTGAATTCATCACAAGATAGAATGATCATAGTTGGCAAGCCACCATCAAATGGAAGTGCTTTGATTCCTTTAAATGAGATCACCTCATATGAAGACTCCGTGAGCTTGGTGCACAATGAAACCCGGTTAAGTACATTGGCCGATGCATGTGAGAGTGGTATGGTTTCGGTGCAGAGAAAAAAGGTTCGGTTCATGTTGCCTCCTAATAGTCCTAAGATGCGAGTATCTGTTAGGGAGGAGCTCCAAGAACTGATTGATGCTAGGGAGAGTGGTACTGCATATTTCTTGGGTCAGGTGCATTTGGCAGTTCGTGAAGGCTCAAACATATTCAAGCGGTTACTGATCATGACCTATGTTTTGAGTGAGAAGAATTGCAGAGAGCCTCCAGTTGCACTCAACATTCCTCATGCTGCTCTTGTTGAGGTTGGTATGGTCTGTAGCATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000122 GO:0000976 GO:0000977 GO:0000981 GO:0000982 GO:0001012 GO:0001067 GO:0001078 GO:0001227 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006082 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009636 GO:0009642 GO:0009651 GO:0009696 GO:0009697 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010188 GO:0010310 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010817 GO:0016053 GO:0016070 GO:0016999 GO:0017000 GO:0017144 GO:0018130 GO:0018958 GO:0019219 GO:0019222 GO:0019438 GO:0019752 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032774 GO:0032787 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0042445 GO:0042446 GO:0042537 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0046189 GO:0046394 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051193 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0098542 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901615 GO:1901617 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:2000112 GO:2000113 GO:2000377 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko05165 map05165
Pfam Domains
Protein Families
K_trans R3H zf-NF-X1

Protein Analysis

798

Amino Acids

89.46

Weight (kDa)

6.91

Isoelectric Point (pI)

42.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
K_trans PF02705 32 - 536 4.6e-133 K+ potassium transporter integral membrane domain
K_trans_C PF22776 552 - 798 1.7e-23 K+ potassium transporter C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1219
Acc65I GGTACC 2 cut(s) 1639, 1791
AccB1I GGYRCC 2 cut(s) 1639, 1791
AccB7I CCANNNNNTGG 1 cut(s) 2000
AccI GTMKAC 2 cut(s) 340, 822
AccII CGCG 1 cut(s) 1080
AciI CCGC 1 cut(s) 2284
AclI AACGTT 1 cut(s) 852
AclWI GGATC 1 cut(s) 1814
AcoI YGGCCR 2 cut(s) 1329, 2088
AcsI RAATTY 5 cut(s) 390, 1568, 1680, 1916, 1954
AcuI CTGAAG 2 cut(s) 266, 1095
AfiI CCNNNNNNNGG 5 cut(s) 865, 1389, 1625, 1649, 2000
AflIII ACRYGT 1 cut(s) 825
AgsI TTSAA 7 cut(s) 64, 437, 557, 631, 1474, 1753, 2281
AhlI ACTAGT 1 cut(s) 701
AjnI CCWGG 4 cut(s) 471, 1167, 1634, 1642
AleI CACNNNNGTG 1 cut(s) 316
Alw21I GWGCWC 2 cut(s) 2064, 2193
Alw26I GTCTC 3 cut(s) 1367, 1678, 1761
Alw44I GTGCAC 1 cut(s) 2060
AlwI GGATC 1 cut(s) 1814
AlwNI CAGNNNCTG 1 cut(s) 1168
AoxI GGCC 4 cut(s) 576, 1329, 1811, 2088
ApaLI GTGCAC 1 cut(s) 2060
ApeKI GCWGC 5 cut(s) 685, 688, 876, 1007, 2360
ApoI RAATTY 5 cut(s) 390, 1568, 1680, 1916, 1954
ArsI GACNNNNNNTTYG 6 cut(s) 786, 818, 1574, 1606, 2290, 2322
Asp700I GAANNNNTTC 1 cut(s) 1062
Asp718I GGTACC 2 cut(s) 1639, 1791
AspS9I GGNCC 4 cut(s) 222, 469, 577, 1811
AsuC2I CCSGG 1 cut(s) 2074
AsuHPI GGTGA 2 cut(s) 1855, 2023
AvaII GGWCC 2 cut(s) 222, 469
BaeGI GKGCMC 1 cut(s) 2064
BaeI ACNNNNGTAYC 2 cut(s) 1623, 1656
BalI TGGCCA 1 cut(s) 1331
BanI GGYRCC 2 cut(s) 1639, 1791
BanII GRGCYC 1 cut(s) 2193
BarI GAAGNNNNNNTAC 2 cut(s) 1114, 1146
BbsI GAAGAC 1 cut(s) 2049
Bbv12I GWGCWC 2 cut(s) 2064, 2193
BbvI GCAGC 5 cut(s) 672, 700, 888, 994, 2347
BccI CCATC 5 cut(s) 239, 953, 1160, 1255, 2002
BcgI CGANNNNNNTGC 2 cut(s) 481, 515
BciT130I CCWGG 4 cut(s) 473, 1169, 1636, 1644
BciVI GTATCC 2 cut(s) 61, 181
BclI TGATCA 2 cut(s) 1974, 2292
BcnI CCSGG 1 cut(s) 2074
BcoDI GTCTC 3 cut(s) 1367, 1678, 1761
BcuI ACTAGT 1 cut(s) 701
BfaI CTAG 4 cut(s) 702, 923, 1625, 2211
BfmI CTRYAG 4 cut(s) 686, 1116, 1593, 2386
BfuAI ACCTGC 1 cut(s) 1219
BfuI GTATCC 2 cut(s) 61, 181
BglI GCCNNNNNGGC 1 cut(s) 1004
BglII AGATCT 2 cut(s) 919, 1819
BisI GCNGC 5 cut(s) 686, 689, 877, 1008, 2361
BlsI GCNGC 5 cut(s) 687, 690, 878, 1009, 2362
BmcAI AGTACT 1 cut(s) 133
Bme1390I CCNGG 5 cut(s) 473, 1169, 1636, 1644, 2074
Bme18I GGWCC 2 cut(s) 222, 469
BmgT120I GGNCC 4 cut(s) 222, 469, 577, 1811
BmiI GGNNCC 4 cut(s) 487, 1552, 1641, 1793
BmrFI CCNGG 5 cut(s) 473, 1169, 1636, 1644, 2074
BmrI ACTGGG 2 cut(s) 796, 1399
BmsI GCATC 4 cut(s) 665, 2083, 2157, 2197
BmuI ACTGGG 2 cut(s) 796, 1399
BpiI GAAGAC 1 cut(s) 2049
BplI GAGNNNNNCTC 4 cut(s) 121, 153, 2018, 2050
BpmI CTGGAG 1 cut(s) 2319
BpuMI CCSGG 1 cut(s) 2074
BsaBI GATNNNNATC 3 cut(s) 589, 752, 1044
BsaJI CCNNGG 3 cut(s) 651, 1635, 1926
Bsc4I CCNNNNNNNGG 5 cut(s) 865, 1389, 1625, 1649, 2000
Bse118I RCCGGY 1 cut(s) 998
Bse3DI GCAATG 2 cut(s) 915, 1321
Bse8I GATNNNNATC 3 cut(s) 589, 752, 1044
BseBI CCWGG 4 cut(s) 473, 1169, 1636, 1644
BseDI CCNNGG 3 cut(s) 651, 1635, 1926
BseGI GGATG 1 cut(s) 1042
BseJI GATNNNNATC 3 cut(s) 589, 752, 1044
BseLI CCNNNNNNNGG 5 cut(s) 865, 1389, 1625, 1649, 2000
BseMI GCAATG 2 cut(s) 915, 1321
BseMII CTCAG 4 cut(s) 44, 49, 1066, 1689
BseRI GAGGAG 1 cut(s) 2201
BseSI GKGCMC 1 cut(s) 2064
BseXI GCAGC 5 cut(s) 672, 700, 888, 994, 2347
BseYI CCCAGC 1 cut(s) 520
BsgI GTGCAG 1 cut(s) 2141
Bsh1236I CGCG 1 cut(s) 1080
BshFI GGCC 4 cut(s) 578, 1331, 1813, 2090
BshNI GGYRCC 2 cut(s) 1639, 1791
BsiHKAI GWGCWC 2 cut(s) 2064, 2193
BsiSI CCGG 3 cut(s) 999, 1685, 2074
BslFI GGGAC 5 cut(s) 169, 712, 803, 1760, 1886
BslI CCNNNNNNNGG 5 cut(s) 865, 1389, 1625, 1649, 2000
BsmAI GTCTC 3 cut(s) 1367, 1678, 1761
BsmFI GGGAC 5 cut(s) 169, 712, 803, 1760, 1886
BsnI GGCC 4 cut(s) 578, 1331, 1813, 2090
Bsp1286I GDGCHC 2 cut(s) 2064, 2193
Bsp1407I TGTACA 2 cut(s) 8, 828
Bsp143I GATC 9 cut(s) 560, 919, 969, 1737, 1806, 1819, 1974, 2028, 2292
Bsp68I TCGCGA 1 cut(s) 1080
BspACI CCGC 1 cut(s) 2284
BspANI GGCC 4 cut(s) 578, 1331, 1813, 2090
BspCNI CTCAG 4 cut(s) 43, 48, 1065, 1688
BspFNI CGCG 1 cut(s) 1080
BspHI TCATGA 4 cut(s) 1030, 1294, 1530, 2295
BspLI GGNNCC 4 cut(s) 487, 1552, 1641, 1793
BspMAI CTGCAG 2 cut(s) 690, 1597
BspMI ACCTGC 1 cut(s) 1219
BspPI GGATC 1 cut(s) 1814
BspT107I GGYRCC 2 cut(s) 1639, 1791
BsrDI GCAATG 2 cut(s) 915, 1321
BsrFI RCCGGY 1 cut(s) 998
BsrGI TGTACA 2 cut(s) 8, 828
BssAI RCCGGY 1 cut(s) 998
BssECI CCNNGG 3 cut(s) 651, 1635, 1926
BssMI GATC 9 cut(s) 560, 919, 969, 1737, 1806, 1819, 1974, 2028, 2292
BssNAI GTATAC 1 cut(s) 823
BssT1I CCWWGG 1 cut(s) 651
Bst1107I GTATAC 1 cut(s) 823
Bst2UI CCWGG 4 cut(s) 473, 1169, 1636, 1644
Bst4CI ACNGT 5 cut(s) 193, 567, 860, 1279, 1428
Bst6I CTCTTC 3 cut(s) 683, 1391, 1887
BstAPI GCANNNNNTGC 1 cut(s) 914
BstAUI TGTACA 2 cut(s) 8, 828
BstC8I GCNNGC 2 cut(s) 327, 1988
BstDEI CTNAG 5 cut(s) 30, 35, 1052, 1675, 2163
BstDSI CCRYGG 1 cut(s) 1926
BstF5I GGATG 1 cut(s) 1042
BstFNI CGCG 1 cut(s) 1080
BstKTI GATC 9 cut(s) 563, 922, 972, 1740, 1809, 1822, 1977, 2031, 2295
BstMAI GTCTC 3 cut(s) 1367, 1678, 1761
BstMBI GATC 9 cut(s) 560, 919, 969, 1737, 1806, 1819, 1974, 2028, 2292
BstMWI GCNNNNNNNGC 2 cut(s) 914, 1004
BstNI CCWGG 4 cut(s) 473, 1169, 1636, 1644
BstNSI RCATGY 3 cut(s) 329, 829, 2100
BstSCI CCNGG 5 cut(s) 471, 1167, 1634, 1642, 2072
BstSFI CTRYAG 4 cut(s) 686, 1116, 1593, 2386
BstSLI GKGCMC 1 cut(s) 2064
BstUI CGCG 1 cut(s) 1080
BstV1I GCAGC 5 cut(s) 672, 700, 888, 994, 2347
BstV2I GAAGAC 1 cut(s) 2049
BstX2I RGATCY 2 cut(s) 919, 1819
BstXI CCANNNNNNTGG 1 cut(s) 1327
BstYI RGATCY 2 cut(s) 919, 1819
BstZ17I GTATAC 1 cut(s) 823
BsuI GTATCC 2 cut(s) 61, 181
BsuRI GGCC 4 cut(s) 578, 1331, 1813, 2090
BtgI CCRYGG 1 cut(s) 1926
BtgZI GCGATG 1 cut(s) 1463
BtsCI GGATG 1 cut(s) 1042
BtsIMutI CAGTG 4 cut(s) 563, 1060, 1169, 1370
BtuMI TCGCGA 1 cut(s) 1080
BveI ACCTGC 1 cut(s) 1219
Cac8I GCNNGC 2 cut(s) 327, 1988
CaiI CAGNNNCTG 1 cut(s) 1168
CciI TCATGA 4 cut(s) 1030, 1294, 1530, 2295
Cfr10I RCCGGY 1 cut(s) 998
Cfr13I GGNCC 4 cut(s) 222, 469, 577, 1811
DdeI CTNAG 5 cut(s) 30, 35, 1052, 1675, 2163
DpnI GATC 9 cut(s) 562, 921, 971, 1739, 1808, 1821, 1976, 2030, 2294
DpnII GATC 9 cut(s) 560, 919, 969, 1737, 1806, 1819, 1974, 2028, 2292
DraI TTTAAA 1 cut(s) 2022
EaeI YGGCCR 2 cut(s) 1329, 2088
Eam1104I CTCTTC 3 cut(s) 683, 1391, 1887
EarI CTCTTC 3 cut(s) 683, 1391, 1887
Ecl136II GAGCTC 1 cut(s) 2191
Eco130I CCWWGG 1 cut(s) 651
Eco24I GRGCYC 1 cut(s) 2193
Eco32I GATATC 2 cut(s) 175, 1246
Eco47I GGWCC 2 cut(s) 222, 469
Eco53kI GAGCTC 1 cut(s) 2191
Eco57I CTGAAG 2 cut(s) 266, 1095
EcoICRI GAGCTC 1 cut(s) 2191
EcoRI GAATTC 4 cut(s) 1568, 1680, 1916, 1954
EcoRII CCWGG 4 cut(s) 471, 1167, 1634, 1642
EcoRV GATATC 2 cut(s) 175, 1246
EcoT14I CCWWGG 1 cut(s) 651
EcoT22I ATGCAT 3 cut(s) 6, 378, 2098
EcoT38I GRGCYC 1 cut(s) 2193
ErhI CCWWGG 1 cut(s) 651
FaqI GGGAC 5 cut(s) 169, 712, 803, 1760, 1886
FauNDI CATATG 2 cut(s) 1771, 2038
FbaI TGATCA 2 cut(s) 1974, 2292
FblI GTMKAC 2 cut(s) 340, 822
Fnu4HI GCNGC 5 cut(s) 686, 689, 877, 1008, 2361
FokI GGATG 1 cut(s) 1049
FriOI GRGCYC 1 cut(s) 2193
Fsp4HI GCNGC 5 cut(s) 686, 689, 877, 1008, 2361
FspBI CTAG 4 cut(s) 702, 923, 1625, 2211
GluI GCNGC 5 cut(s) 686, 689, 877, 1008, 2361
GsaI CCCAGC 1 cut(s) 524
GsuI CTGGAG 1 cut(s) 2319
HaeIII GGCC 4 cut(s) 578, 1331, 1813, 2090
HapII CCGG 3 cut(s) 999, 1685, 2074
HincII GTYRAC 1 cut(s) 856
HindII GTYRAC 1 cut(s) 856
HindIII AAGCTT 1 cut(s) 624
HinfI GANTC 8 cut(s) 26, 413, 611, 1058, 1711, 1946, 2014, 2045
HpaII CCGG 3 cut(s) 999, 1685, 2074
HphI GGTGA 2 cut(s) 1855, 2023
Hpy166II GTNNAC 4 cut(s) 341, 823, 856, 2062
Hpy188I TCNGA 9 cut(s) 102, 184, 571, 598, 729, 904, 935, 1213, 1788
Hpy8I GTNNAC 4 cut(s) 341, 823, 856, 2062
HpyAV CCTTC 6 cut(s) 220, 281, 400, 1759, 1797, 2258
HpyCH4III ACNGT 5 cut(s) 193, 567, 860, 1279, 1428
HpyCH4IV ACGT 1 cut(s) 852
HpyF10VI GCNNNNNNNGC 2 cut(s) 914, 1004
HpyF3I CTNAG 5 cut(s) 30, 35, 1052, 1675, 2163
HpySE526I ACGT 1 cut(s) 852
KpnI GGTACC 2 cut(s) 1643, 1795
Ksp22I TGATCA 2 cut(s) 1974, 2292
Kzo9I GATC 9 cut(s) 560, 919, 969, 1737, 1806, 1819, 1974, 2028, 2292
LmnI GCTCC 5 cut(s) 142, 730, 1487, 2188, 2196
Lsp1109I GCAGC 5 cut(s) 672, 700, 888, 994, 2347
LweI GCATC 4 cut(s) 665, 2083, 2157, 2197
MaeI CTAG 4 cut(s) 702, 923, 1625, 2211
MaeII ACGT 1 cut(s) 852
MaeIII GTNAC 6 cut(s) 452, 1279, 1351, 1368, 1630, 2286
MalI GATC 9 cut(s) 562, 921, 971, 1739, 1808, 1821, 1976, 2030, 2294
MboI GATC 9 cut(s) 560, 919, 969, 1737, 1806, 1819, 1974, 2028, 2292
MfeI CAATTG 1 cut(s) 1284
MflI RGATCY 2 cut(s) 919, 1819
MhlI GDGCHC 2 cut(s) 2064, 2193
MlsI TGGCCA 1 cut(s) 1331
MluNI TGGCCA 1 cut(s) 1331
MlyI GAGTC 2 cut(s) 620, 2039
MmeI TCCRAC 1 cut(s) 842
Mox20I TGGCCA 1 cut(s) 1331
Mph1103I ATGCAT 3 cut(s) 6, 378, 2098
MroXI GAANNNNTTC 1 cut(s) 1062
MscI TGGCCA 1 cut(s) 1331
MseI TTAA 6 cut(s) 266, 849, 1577, 1824, 2021, 2078
MslI CAYNNNNRTG 4 cut(s) 316, 1035, 1053, 1925
Msp20I TGGCCA 1 cut(s) 1331
MspA1I CMGCKG 1 cut(s) 1115
MspI CCGG 3 cut(s) 999, 1685, 2074
MspR9I CCNGG 5 cut(s) 473, 1169, 1636, 1644, 2074
MunI CAATTG 1 cut(s) 1284
MvaI CCWGG 4 cut(s) 473, 1169, 1636, 1644
MvnI CGCG 1 cut(s) 1080
MwoI GCNNNNNNNGC 2 cut(s) 914, 1004
NciI CCSGG 1 cut(s) 2074
NdeI CATATG 2 cut(s) 1771, 2038
NdeII GATC 9 cut(s) 560, 919, 969, 1737, 1806, 1819, 1974, 2028, 2292
NlaIV GGNNCC 4 cut(s) 487, 1552, 1641, 1793
NmuCI GTSAC 3 cut(s) 452, 1351, 1368
NruI TCGCGA 1 cut(s) 1080
NsiI ATGCAT 3 cut(s) 6, 378, 2098
NspI RCATGY 3 cut(s) 329, 829, 2100
OliI CACNNNNGTG 1 cut(s) 316
PaeI GCATGC 1 cut(s) 329
PagI TCATGA 4 cut(s) 1030, 1294, 1530, 2295
PciI ACATGT 1 cut(s) 825
PdmI GAANNNNTTC 1 cut(s) 1062
PfeI GAWTC 6 cut(s) 26, 413, 1058, 1711, 1946, 2014
PflMI CCANNNNNTGG 1 cut(s) 2000
PkrI GCNGC 5 cut(s) 687, 690, 878, 1009, 2362
PleI GAGTC 2 cut(s) 619, 2039
PpsI GAGTC 2 cut(s) 619, 2039
PscI ACATGT 1 cut(s) 825
Psp124BI GAGCTC 1 cut(s) 2193
Psp1406I AACGTT 1 cut(s) 852
Psp6I CCWGG 4 cut(s) 471, 1167, 1634, 1642
PspFI CCCAGC 1 cut(s) 520
PspGI CCWGG 4 cut(s) 471, 1167, 1634, 1642
PspN4I GGNNCC 4 cut(s) 487, 1552, 1641, 1793
PspPI GGNCC 4 cut(s) 222, 469, 577, 1811
PstI CTGCAG 2 cut(s) 690, 1597
PstNI CAGNNNCTG 1 cut(s) 1168
PsuI RGATCY 2 cut(s) 919, 1819
PvuII CAGCTG 1 cut(s) 1115
RruI TCGCGA 1 cut(s) 1080
RseI CAYNNNNRTG 4 cut(s) 316, 1035, 1053, 1925
SacI GAGCTC 1 cut(s) 2193
SaqAI TTAA 6 cut(s) 266, 849, 1577, 1824, 2021, 2078
SatI GCNGC 5 cut(s) 686, 689, 877, 1008, 2361
Sau3AI GATC 9 cut(s) 560, 919, 969, 1737, 1806, 1819, 1974, 2028, 2292
Sau96I GGNCC 4 cut(s) 222, 469, 577, 1811
ScaI AGTACT 1 cut(s) 133
SchI GAGTC 2 cut(s) 620, 2039
ScrFI CCNGG 5 cut(s) 473, 1169, 1636, 1644, 2074
SduI GDGCHC 2 cut(s) 2064, 2193
SfaNI GCATC 4 cut(s) 665, 2083, 2157, 2197
SfcI CTRYAG 4 cut(s) 686, 1116, 1593, 2386
SinI GGWCC 2 cut(s) 222, 469
SmiMI CAYNNNNRTG 4 cut(s) 316, 1035, 1053, 1925
SpeI ACTAGT 1 cut(s) 701
SphI GCATGC 1 cut(s) 329
SsiI CCGC 1 cut(s) 2284
SspI AATATT 1 cut(s) 778
SspMI CTAG 4 cut(s) 702, 923, 1625, 2211
SstI GAGCTC 1 cut(s) 2193
StyD4I CCNGG 5 cut(s) 471, 1167, 1634, 1642, 2072
StyI CCWWGG 1 cut(s) 651
TaaI ACNGT 5 cut(s) 193, 567, 860, 1279, 1428
TaiI ACGT 1 cut(s) 855
TaqI TCGA 3 cut(s) 416, 1566, 1572
TaqII GACCGA 1 cut(s) 520
TatI WGTACW 5 cut(s) 8, 131, 306, 828, 2081
TfiI GAWTC 6 cut(s) 26, 413, 1058, 1711, 1946, 2014
Tru1I TTAA 6 cut(s) 266, 849, 1577, 1824, 2021, 2078
Tru9I TTAA 6 cut(s) 266, 849, 1577, 1824, 2021, 2078
TscAI CASTG 4 cut(s) 570, 1060, 1169, 1377
TseFI GTSAC 3 cut(s) 452, 1351, 1368
TseI GCWGC 5 cut(s) 685, 688, 876, 1007, 2360
Tsp45I GTSAC 3 cut(s) 452, 1351, 1368
TspGWI ACGGA 2 cut(s) 1915, 2038
TspRI CASTG 4 cut(s) 570, 1060, 1169, 1377
Van91I CCANNNNNTGG 1 cut(s) 2000
VneI GTGCAC 1 cut(s) 2060
VpaK11BI GGWCC 2 cut(s) 222, 469
XapI RAATTY 5 cut(s) 390, 1568, 1680, 1916, 1954
XceI RCATGY 3 cut(s) 329, 829, 2100
XcmI CCANNNNNNNNNTGG 1 cut(s) 1080
XmiI GTMKAC 2 cut(s) 340, 822
XmnI GAANNNNTTC 1 cut(s) 1062
XspI CTAG 4 cut(s) 702, 923, 1625, 2211
ZrmI AGTACT 1 cut(s) 133
Zsp2I ATGCAT 3 cut(s) 6, 378, 2098
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.