Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0011903

Physical Location & Seq

Genomic Coordinates Reverse (-)

1291697 .. 1293664

Gene Structure 1968 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G017700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 708 bp

ATGAGAGTTCCAAGAAATCTCGAGGTCTTGAAAATGGGCGCAATCAGCTATCTGGATGCACTTAAGCTGCAGGAAAAGCTGGCCTCCAATAGAAAAATTCATAAGATTCCAGATACTCTCCTGTCCCTGCAACATCCACCTACGTACACCCTTGGCAAACGGCGAACTGATCACAATCTGTTGATTCCCGAGTCTGAACTTAAAAGAATAGGAGCTGAACTGCACTACACACAAAGAGGAGGAGACATTACATTTCATGGTCCACATCAAGCCATCTTATATCCCATTATTTCTCTTCGGGATATTGGGCTTGGTGCTCGTAAATACGTGGAGAATCTTGAGTCAAGCATGATTGAATTGGCGTCTCTGTATGGTGTGAAAGCTTCTCCTGGAAAAAAATGTGAAACGGGGGTTTGGGTTGGAGACAGAAAAATTGGTGCAATTGGTGTACGGATTTCATATGGAATCACTTCTCATGGATTGGCATTTAACATTGATCCAGATTTGGACTATTTTAAGCATATCGTACCTTGTGGCATTGCAGATAAAGAAGTTACATCATTGAGAAGGGAGACAGACTTGGTGCTTCCTACAGAAGAAGTAATTCAGGACCAGTTGATTTCTTGTTTTGCTAGACAATTTGGTTATAGTAATCTTGTATGGAAGGATGCTGCCTCAATATTGTCAGACAATGGGGAAACCGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009249 GO:0009987 GO:0010467 GO:0016740 GO:0016746 GO:0016747 GO:0018065 GO:0018193 GO:0018205 GO:0019538 GO:0033819 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051604 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00785 ko01100 map00785 map01100

Pfam Domains

Protein Families

BPL_LplA_LipB

Protein Analysis

236

Amino Acids

26.24

Weight (kDa)

7.09

Isoelectric Point (pI)

36.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011903)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04640 AT1G04640
fragaria_vesca	FvH4_3g43830
malus_domestica	MD11G1020800.v1.1
prunus_persica	Prupe.6G017700_v2.0.a1
pyrus_communis	pycom03g01630
rosa_chinensis	RchiOBHm_Chr5g0079311
rosa_laevigata	RLG00000036810
rosa_multiflora	Rmu_sc0000607.1_g000005 Rmu_sc0002187.1_g000033
rosa_roxburghii	Rroxscaffold_1G00003400 Rroxscaffold_1G00003620
rosa_rugosa	Rorug05G0464300
rosa_samantha	Rh5AG515200 Rh5BG540100 Rh5CG563100 Rh5DG550500
rosa_wichuraiana	Rw0G005210 Rw5G048050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclWI	GGATC	1 cut(s)	491
AcsI	RAATTY	1 cut(s)	96
AcyI	GRCGYC	1 cut(s)	362
AfaI	GTAC	3 cut(s)	146, 450, 528
AflII	CTTAAG	1 cut(s)	62
AgsI	TTSAA	2 cut(s)	31, 356
AjnI	CCWGG	1 cut(s)	388
AluBI	AGCT	5 cut(s)	48, 67, 79, 215, 383
AluI	AGCT	5 cut(s)	48, 67, 79, 215, 383
Alw21I	GWGCWC	1 cut(s)	319
Alw26I	GTCTC	4 cut(s)	237, 369, 417, 566
AlwI	GGATC	1 cut(s)	491
Ama87I	CYCGRG	2 cut(s)	20, 188
AoxI	GGCC	1 cut(s)	81
ApeKI	GCWGC	2 cut(s)	67, 671
ApoI	RAATTY	1 cut(s)	96
Asp700I	GAANNNNTTC	2 cut(s)	469, 603
AspLEI	GCGC	1 cut(s)	41
AspS9I	GGNCC	2 cut(s)	260, 610
AvaI	CYCGRG	2 cut(s)	20, 188
AvaII	GGWCC	2 cut(s)	260, 610
Bbv12I	GWGCWC	1 cut(s)	319
BbvI	GCAGC	2 cut(s)	54, 658
BccI	CCATC	1 cut(s)	281
BceAI	ACGGC	1 cut(s)	176
BciT130I	CCWGG	1 cut(s)	390
BclI	TGATCA	1 cut(s)	169
BcoDI	GTCTC	4 cut(s)	237, 369, 417, 566
BfaI	CTAG	1 cut(s)	633
BfmI	CTRYAG	2 cut(s)	68, 591
BfrI	CTTAAG	1 cut(s)	62
BisI	GCNGC	2 cut(s)	68, 672
BlsI	GCNGC	2 cut(s)	69, 673
Bme1390I	CCNGG	1 cut(s)	390
Bme18I	GGWCC	2 cut(s)	260, 610
BmeT110I	CYCGRG	2 cut(s)	20, 188
BmgT120I	GGNCC	2 cut(s)	260, 610
BmrFI	CCNGG	1 cut(s)	390
BmsI	GCATC	2 cut(s)	46, 658
BpuEI	CTTGAG	1 cut(s)	359
BsaAI	YACGTR	2 cut(s)	144, 328
BsaBI	GATNNNNATC	1 cut(s)	174
BsaHI	GRCGYC	1 cut(s)	362
BsaJI	CCNNGG	1 cut(s)	151
Bse1I	ACTGG	1 cut(s)	613
Bse3DI	GCAATG	1 cut(s)	537
Bse8I	GATNNNNATC	1 cut(s)	174
BseBI	CCWGG	1 cut(s)	390
BseDI	CCNNGG	1 cut(s)	151
BseGI	GGATG	3 cut(s)	61, 133, 673
BseJI	GATNNNNATC	1 cut(s)	174
BseMI	GCAATG	1 cut(s)	537
BseNI	ACTGG	1 cut(s)	613
BseRI	GAGGAG	2 cut(s)	252, 255
BseXI	GCAGC	2 cut(s)	54, 658
BsgI	GTGCAG	1 cut(s)	206
BshFI	GGCC	1 cut(s)	83
BsiHKAI	GWGCWC	1 cut(s)	319
BsiHKCI	CYCGRG	2 cut(s)	20, 188
BslFI	GGGAC	1 cut(s)	109
BsmAI	GTCTC	4 cut(s)	237, 369, 417, 566
BsmBI	CGTCTC	1 cut(s)	369
BsmFI	GGGAC	1 cut(s)	109
BsnI	GGCC	1 cut(s)	83
BsoBI	CYCGRG	2 cut(s)	20, 188
Bsp1286I	GDGCHC	1 cut(s)	319
Bsp143I	GATC	2 cut(s)	169, 496
BspANI	GGCC	1 cut(s)	83
BspMAI	CTGCAG	1 cut(s)	72
BspPI	GGATC	1 cut(s)	491
BspTI	CTTAAG	1 cut(s)	62
BsrDI	GCAATG	1 cut(s)	537
BsrI	ACTGG	1 cut(s)	613
BssECI	CCNNGG	1 cut(s)	151
BssMI	GATC	2 cut(s)	169, 496
BssNI	GRCGYC	1 cut(s)	362
BssT1I	CCWWGG	1 cut(s)	151
Bst2UI	CCWGG	1 cut(s)	390
Bst6I	CTCTTC	1 cut(s)	300
BstACI	GRCGYC	1 cut(s)	362
BstAFI	CTTAAG	1 cut(s)	62
BstBAI	YACGTR	2 cut(s)	144, 328
BstC8I	GCNNGC	1 cut(s)	81
BstF5I	GGATG	3 cut(s)	61, 133, 673
BstHHI	GCGC	1 cut(s)	41
BstKTI	GATC	2 cut(s)	172, 499
BstMAI	GTCTC	4 cut(s)	237, 369, 417, 566
BstMBI	GATC	2 cut(s)	169, 496
BstMWI	GCNNNNNNNGC	2 cut(s)	45, 76
BstNI	CCWGG	1 cut(s)	390
BstSCI	CCNGG	1 cut(s)	388
BstSFI	CTRYAG	2 cut(s)	68, 591
BstSNI	TACGTA	1 cut(s)	144
BstV1I	GCAGC	2 cut(s)	54, 658
BsuRI	GGCC	1 cut(s)	83
BtsCI	GGATG	3 cut(s)	61, 133, 673
Cac8I	GCNNGC	1 cut(s)	81
CfoI	GCGC	1 cut(s)	41
Cfr13I	GGNCC	2 cut(s)	260, 610
CseI	GACGC	1 cut(s)	351
Csp6I	GTAC	3 cut(s)	145, 449, 527
CviAII	CATG	3 cut(s)	257, 349, 476
CviJI	RGCY	8 cut(s)	48, 67, 79, 83, 215, 272, 310, 383
CviKI_1	RGCY	8 cut(s)	48, 67, 79, 83, 215, 272, 310, 383
CviQI	GTAC	3 cut(s)	145, 449, 527
DpnI	GATC	2 cut(s)	171, 498
DpnII	GATC	2 cut(s)	169, 496
Eam1104I	CTCTTC	1 cut(s)	300
EarI	CTCTTC	1 cut(s)	300
Eco105I	TACGTA	1 cut(s)	144
Eco130I	CCWWGG	1 cut(s)	151
Eco47I	GGWCC	2 cut(s)	260, 610
Eco88I	CYCGRG	2 cut(s)	20, 188
EcoRII	CCWGG	1 cut(s)	388
EcoT14I	CCWWGG	1 cut(s)	151
ErhI	CCWWGG	1 cut(s)	151
Esp3I	CGTCTC	1 cut(s)	369
FaeI	CATG	3 cut(s)	260, 352, 479
FaqI	GGGAC	1 cut(s)	109
FatI	CATG	3 cut(s)	256, 348, 475
FauNDI	CATATG	1 cut(s)	460
FbaI	TGATCA	1 cut(s)	169
Fnu4HI	GCNGC	2 cut(s)	68, 672
FokI	GGATG	3 cut(s)	68, 120, 680
Fsp4HI	GCNGC	2 cut(s)	68, 672
FspBI	CTAG	1 cut(s)	633
GlaI	GCGC	1 cut(s)	40
GluI	GCNGC	2 cut(s)	68, 672
HaeIII	GGCC	1 cut(s)	83
HgaI	GACGC	1 cut(s)	351
HhaI	GCGC	1 cut(s)	41
Hin1I	GRCGYC	1 cut(s)	362
Hin1II	CATG	3 cut(s)	260, 352, 479
Hin6I	GCGC	1 cut(s)	39
HinP1I	GCGC	1 cut(s)	39
HindIII	AAGCTT	1 cut(s)	381
HinfI	GANTC	6 cut(s)	106, 184, 191, 334, 341, 465
Hpy166II	GTNNAC	3 cut(s)	147, 263, 449
Hpy188I	TCNGA	2 cut(s)	196, 688
Hpy188III	TCNNGA	9 cut(s)	20, 28, 53, 110, 188, 299, 338, 500, 608
Hpy8I	GTNNAC	3 cut(s)	147, 263, 449
HpyAV	CCTTC	2 cut(s)	561, 658
HpyCH4IV	ACGT	2 cut(s)	143, 327
HpyCH4V	TGCA	6 cut(s)	59, 70, 130, 223, 440, 542
HpyF10VI	GCNNNNNNNGC	2 cut(s)	45, 76
HpySE526I	ACGT	2 cut(s)	143, 327
Hsp92I	GRCGYC	1 cut(s)	362
Hsp92II	CATG	3 cut(s)	260, 352, 479
HspAI	GCGC	1 cut(s)	39
Ksp22I	TGATCA	1 cut(s)	169
Kzo9I	GATC	2 cut(s)	169, 496
LmnI	GCTCC	1 cut(s)	212
Lsp1109I	GCAGC	2 cut(s)	54, 658
LweI	GCATC	2 cut(s)	46, 658
MaeI	CTAG	1 cut(s)	633
MaeII	ACGT	2 cut(s)	143, 327
MaeIII	GTNAC	1 cut(s)	553
MalI	GATC	2 cut(s)	171, 498
MboI	GATC	2 cut(s)	169, 496
MboII	GAAGA	2 cut(s)	287, 608
MfeI	CAATTG	1 cut(s)	441
MhlI	GDGCHC	1 cut(s)	319
MluCI	AATT	6 cut(s)	96, 356, 432, 441, 603, 638
MlyI	GAGTC	2 cut(s)	200, 350
MmeI	TCCRAC	1 cut(s)	400
MnlI	CCTC	5 cut(s)	16, 94, 230, 233, 685
MroXI	GAANNNNTTC	2 cut(s)	469, 603
MseI	TTAA	4 cut(s)	63, 201, 489, 516
MspCI	CTTAAG	1 cut(s)	62
MspR9I	CCNGG	1 cut(s)	390
MunI	CAATTG	1 cut(s)	441
MvaI	CCWGG	1 cut(s)	390
MwoI	GCNNNNNNNGC	2 cut(s)	45, 76
NdeI	CATATG	1 cut(s)	460
NdeII	GATC	2 cut(s)	169, 496
NlaIII	CATG	3 cut(s)	260, 352, 479
PaeR7I	CTCGAG	1 cut(s)	20
PdmI	GAANNNNTTC	2 cut(s)	469, 603
PfeI	GAWTC	4 cut(s)	106, 184, 334, 465
PfoI	TCCNGGA	1 cut(s)	388
PkrI	GCNGC	2 cut(s)	69, 673
PleI	GAGTC	2 cut(s)	199, 349
PpsI	GAGTC	2 cut(s)	199, 349
Ppu21I	YACGTR	2 cut(s)	144, 328
Psp6I	CCWGG	1 cut(s)	388
PspGI	CCWGG	1 cut(s)	388
PspPI	GGNCC	2 cut(s)	260, 610
PstI	CTGCAG	1 cut(s)	72
RsaI	GTAC	3 cut(s)	146, 450, 528
RsaNI	GTAC	3 cut(s)	145, 449, 527
SaqAI	TTAA	4 cut(s)	63, 201, 489, 516
SatI	GCNGC	2 cut(s)	68, 672
Sau3AI	GATC	2 cut(s)	169, 496
Sau96I	GGNCC	2 cut(s)	260, 610
SchI	GAGTC	2 cut(s)	200, 350
ScrFI	CCNGG	1 cut(s)	390
SduI	GDGCHC	1 cut(s)	319
SfaNI	GCATC	2 cut(s)	46, 658
SfcI	CTRYAG	2 cut(s)	68, 591
Sfr274I	CTCGAG	1 cut(s)	20
SinI	GGWCC	2 cut(s)	260, 610
SlaI	CTCGAG	1 cut(s)	20
SmlI	CTYRAG	3 cut(s)	20, 62, 338
SmoI	CTYRAG	3 cut(s)	20, 62, 338
SnaBI	TACGTA	1 cut(s)	144
Sse9I	AATT	6 cut(s)	96, 356, 432, 441, 603, 638
SspI	AATATT	1 cut(s)	681
SspMI	CTAG	1 cut(s)	633
StyD4I	CCNGG	1 cut(s)	388
StyI	CCWWGG	1 cut(s)	151
TaiI	ACGT	2 cut(s)	146, 330
TaqI	TCGA	1 cut(s)	21
TasI	AATT	6 cut(s)	96, 356, 432, 441, 603, 638
TfiI	GAWTC	4 cut(s)	106, 184, 334, 465
Tru1I	TTAA	4 cut(s)	63, 201, 489, 516
Tru9I	TTAA	4 cut(s)	63, 201, 489, 516
TseI	GCWGC	2 cut(s)	67, 671
TspDTI	ATGAA	3 cut(s)	89, 245, 447
TspGWI	ACGGA	1 cut(s)	466
Vha464I	CTTAAG	1 cut(s)	62
VpaK11BI	GGWCC	2 cut(s)	260, 610
XapI	RAATTY	1 cut(s)	96
XhoI	CTCGAG	1 cut(s)	20
XmnI	GAANNNNTTC	2 cut(s)	469, 603
XspI	CTAG	1 cut(s)	633

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.