Prupe.6G056300_v2.0.a1

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0011766
Physical Location & Seq
Reverse (-)
3955835 .. 3959283
3449 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G056300.1

Sequence Viewer

Length: 2088 bp
ATGTGCAGTGGTTCCAAGAGGAAACCTTCTTCCACTGACTTGATCATGGAGCGTGAGAAACAAGAAGGGATGCGGTATAGTTTTTCAATTTTGCTTGAATTATCGGCCTCCGATGATCTAGATGGGTTCAAAAGGGCTGTAGAAGAAGAGGGTCATGATGTTGATGAGGCAAGTTATTGGTATGGAAGGCTAATTGGCTCAAAGAAGATGGGGTTTGAAGAGAGGACACCGCTCATGATTGCCGCTATGTTTGGTAGCAAGAACGTGCTGAATTATATTCTCCAAACATGTCTTGTTGATGTTAATAGAGCCTGTGGTTCAGATAGAGCCACGGCTCTTCACTGTGCTGCTGCTGGTGGCTCATCTGCTTCAGCTGAGGTTGTCAAGCTCTTGCTTGCTACTTCTGCTGATGCAAGTTCTCTTGATGCTAATGGAAACCAAGCAGGTGACTTGATTGCACCTGCTTATAGTTCGACCTTCAATTCAAGGAAGAAAGCTTTGGAGGTCATGCTCAAGGGTGTTCCCAGTATAGATGAACCTTTTGACTTTTCTGAGCAAATGGTTTATGAAACAGAAGGGCAAGAACAGCAAGAGATTACAACTCCTTGTGCTTCAAAGGATGGAACAGAGAAGAAAGAGTATCCGATTGATCTTTCACTTCCAGACATCAAGAACGGAATTTATAGCACAGATGAGTTTAGAATGTATACTTTCAAGGTCAAGCCTTGCTCAAGGGCTTATTCACATGACTGGACAGAGTGCCCGTTTGTCCACCCAGGGGAAAACGCAAGGCGGCGTGATCCAAGGAAATATCATTATAGCTGTGTTCCTTGCCCGGAGTTCAGAAAAGGGGCCTGCAGGCAGGGAGATGCTTGTGAGTATGCACATGGTATTTTTGAATGTTGGCTTCACCCTGCCCAGTACCGCACCCGTATTTGCAAGGATGAGACTGGATGCACTAGAAGGGTCTGTTTCTTTGCTCACAAGCCAGAAGAACTCCGTCCCTTGTATGCTTCGACAGGTTCTGCTGTGCCGTCTCCGAGATCATTCTCAGCCAATGCTTCTTCTCTGGACATGGGTTCAATTAGCCCACTTTCCCTCAATTCTCCATCTATGTTAATTCCTCCTGCTTCAACTCCACCGATGACTCCGTCGGGAGCCTCTTCTCCTAGGAGTGGAAACATGTGGCAAAACCAGCCAAACATCGCACCTCCCACGTTGCAGCTTCCCGGTAGCAGGTTGAAATCTACCCTAAGTGCTAGAGATATGGATTTAGACATTGAAGTACTTAGTCTGGAAAGTCATCGCCGCAGGCAGCAGCGCTTGATAGATGAGATATCTGGTTCCCCATCCAGCTGGAACACTGGCTTATCTTCTCCTTCAGCCTTTGCTGCCTCCGGGAATCGAACAGGGGAGTTGAATAGGATAGGAGGAGTGAACCCTACTAACCTTGATGATATTTTTGGATCTCTAGATCCTGCAATTTTGCCTCAATATAATGGGCCAGCATCCCAGTTACATTCTCCAACTGGGATCCAGATGCGCCAAAACATGAACCTGCAGCCCCGTCCCAGCTACTCAGCCAGCCTCTCATCCTCTCCTGTGAGGGCTTCTCCATTGTTTGGAGCTGATGCATCTAGTGCAGCTGCTGTTTTTAGTTCAAGGTCAGCTGCATTTGCAAAGCGGAGTCAGAGCTTCATTGAGCGTAGTGCTGGCAACCGTAATCCAGGGTTTTCTTCACCTGCCGATTCTGGAACTTTAATGCCCTCAAACATTTCAGATTGGGGCTCTCCTGGTGGCAAATTAGACTGGGGTATGCAGGGGGAAGAGCTGAACAAGCTGAGGAAATCTGCTTCTTTTGGATTCCGAAGCTCAAATGCTCCAACCAGGATGCCAGGAACTGCTGATGAGCCTGATGTATCTTGGGTTCAATCTCTTGTCAAGGATGCACCACCACCTTCGCAACTCGGGCAATATGGTTTTGAGGATCAGCAGCAGCCGCAGTGCCACCCTAACAATGGAGGTCCAGAGATGCTCCCTGCTTGGGTGGAGCAGCTCTACTTGGAGCAGGAGCAGATGGTGGCTTAG

Protein Analysis

696

Amino Acids

75.74

Weight (kDa)

5.72

Isoelectric Point (pI)

61.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011766)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G58620
fragaria_vesca FvH4_3g38750 FvH4_3g38750 FvH4_3g38750
malus_domestica MD03G1068400.v1.1 MD11G1072800.v1.1
prunus_persica Prupe.6G056300_v2.0.a1
pyrus_communis pycom03g05490 pycom11g06050
rosa_chinensis RchiOBHm_Chr5g0069901
rosa_laevigata RLG00000036106
rosa_multiflora Rmu_ssc0000133.1_g000002
rosa_roxburghii Rroxscaffold_1G00011160
rosa_rugosa Rorug05G0400600
rosa_samantha Rh5AG457700 Rh5BG476500 Rh5CG500300 Rh5DG488400
rosa_wichuraiana Rw5G042740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 434, 469, 1750
Acc36I ACCTGC 5 cut(s) 434, 469, 1227, 1566, 1750
AccB7I CCANNNNNTGG 1 cut(s) 1622
AccBSI CCGCTC 1 cut(s) 232
AccI GTMKAC 1 cut(s) 707
AciI CCGC 8 cut(s) 73, 230, 243, 793, 925, 1309, 1684, 2000
AclWI GGATC 6 cut(s) 794, 1469, 1474, 1528, 1541, 1995
AcsI RAATTY 1 cut(s) 678
AcuI CTGAAG 2 cut(s) 354, 1365
AfaI GTAC 2 cut(s) 923, 1287
AfeI AGCGCT 1 cut(s) 1322
AfiI CCNNNNNNNGG 6 cut(s) 778, 1175, 1236, 1622, 2018, 2044
AflIII ACRYGT 2 cut(s) 287, 1182
AjnI CCWGG 5 cut(s) 775, 1726, 1792, 1886, 1894
AjuI GAANNNNNNNTTGG 2 cut(s) 482, 514
Alw26I GTCTC 2 cut(s) 941, 1041
AlwI GGATC 6 cut(s) 794, 1469, 1474, 1528, 1541, 1995
AlwNI CAGNNNCTG 3 cut(s) 1025, 1649, 1901
Ama87I CYCGRG 1 cut(s) 1967
Aor51HI AGCGCT 1 cut(s) 1322
AoxI GGCC 3 cut(s) 105, 852, 1502
ApoI RAATTY 1 cut(s) 678
AspA2I CCTAGG 1 cut(s) 1169
AspLEI GCGC 2 cut(s) 1323, 1545
AspS9I GGNCC 3 cut(s) 852, 1502, 2024
AsuC2I CCSGG 3 cut(s) 836, 1230, 1399
AsuHPI GGTGA 3 cut(s) 458, 902, 1731
AvaI CYCGRG 1 cut(s) 1967
AvaII GGWCC 1 cut(s) 2024
AvrII CCTAGG 1 cut(s) 1169
BaeGI GKGCMC 1 cut(s) 764
BamHI GGATCC 1 cut(s) 1533
BanII GRGCYC 1 cut(s) 1790
BbvCI CCTCAGC 2 cut(s) 375, 1841
BccI CCATC 6 cut(s) 116, 202, 614, 1117, 1357, 2071
BceAI ACGGC 2 cut(s) 348, 1018
BciT130I CCWGG 5 cut(s) 777, 1728, 1794, 1888, 1896
BciVI GTATCC 1 cut(s) 651
BclI TGATCA 1 cut(s) 42
BcnI CCSGG 3 cut(s) 836, 1230, 1399
BcoDI GTCTC 2 cut(s) 941, 1041
BfaI CTAG 6 cut(s) 119, 960, 1170, 1260, 1472, 1638
BfmI CTRYAG 3 cut(s) 138, 856, 1559
BfoI RGCGCY 1 cut(s) 1324
BfuAI ACCTGC 5 cut(s) 434, 469, 1227, 1566, 1750
BfuI GTATCC 1 cut(s) 651
BlnI CCTAGG 1 cut(s) 1169
BmcAI AGTACT 1 cut(s) 1287
Bme1390I CCNGG 8 cut(s) 777, 836, 1230, 1399, 1728, 1794, 1888, 1896
Bme18I GGWCC 1 cut(s) 2024
BmeT110I CYCGRG 1 cut(s) 1967
BmgT120I GGNCC 3 cut(s) 852, 1502, 2024
BmiI GGNNCC 5 cut(s) 13, 853, 1159, 1345, 1535
BmrFI CCNGG 8 cut(s) 777, 836, 1230, 1399, 1728, 1794, 1888, 1896
BmrI ACTGGG 5 cut(s) 519, 913, 1507, 1539, 1819
BmuI ACTGGG 5 cut(s) 519, 913, 1507, 1539, 1819
BplI GAGNNNNNCTC 2 cut(s) 1597, 1629
Bpu10I CCTNAGC 2 cut(s) 375, 1841
BpuEI CTTGAG 2 cut(s) 497, 715
BpuMI CCSGG 3 cut(s) 836, 1230, 1399
BsaJI CCNNGG 6 cut(s) 330, 775, 776, 803, 1169, 1727
Bsc4I CCNNNNNNNGG 6 cut(s) 778, 1175, 1236, 1622, 2018, 2044
Bse1I ACTGG 8 cut(s) 525, 755, 919, 955, 1369, 1513, 1534, 1814
BseBI CCWGG 5 cut(s) 777, 1728, 1794, 1888, 1896
BseDI CCNNGG 6 cut(s) 330, 775, 776, 803, 1169, 1727
BseGI GGATG 9 cut(s) 75, 625, 949, 959, 1349, 1508, 1592, 1896, 1951
BseLI CCNNNNNNNGG 6 cut(s) 778, 1175, 1236, 1622, 2018, 2044
BseMII CTCAG 5 cut(s) 366, 543, 1065, 1593, 1832
BseNI ACTGG 8 cut(s) 525, 755, 919, 955, 1369, 1513, 1534, 1814
BseRI GAGGAG 1 cut(s) 1446
BseSI GKGCMC 1 cut(s) 764
BseYI CCCAGC 1 cut(s) 1571
BsgI GTGCAG 2 cut(s) 25, 1662
BshFI GGCC 3 cut(s) 107, 854, 1504
BsiHKCI CYCGRG 1 cut(s) 1967
BsiSI CCGG 3 cut(s) 836, 1230, 1398
BslFI GGGAC 2 cut(s) 987, 1554
BslI CCNNNNNNNGG 6 cut(s) 778, 1175, 1236, 1622, 2018, 2044
BsmAI GTCTC 2 cut(s) 941, 1041
BsmBI CGTCTC 1 cut(s) 1041
BsmFI GGGAC 2 cut(s) 987, 1554
BsnI GGCC 3 cut(s) 107, 854, 1504
BsoBI CYCGRG 1 cut(s) 1967
Bsp1286I GDGCHC 2 cut(s) 764, 1790
Bsp143I GATC 9 cut(s) 42, 115, 649, 799, 1043, 1466, 1474, 1533, 1987
BspACI CCGC 8 cut(s) 73, 230, 243, 793, 925, 1309, 1684, 2000
BspANI GGCC 3 cut(s) 107, 854, 1504
BspCNI CTCAG 5 cut(s) 367, 544, 1064, 1592, 1833
BspHI TCATGA 2 cut(s) 154, 234
BspLI GGNNCC 5 cut(s) 13, 853, 1159, 1345, 1535
BspMAI CTGCAG 2 cut(s) 860, 1563
BspMI ACCTGC 5 cut(s) 434, 469, 1227, 1566, 1750
BspPI GGATC 6 cut(s) 794, 1469, 1474, 1528, 1541, 1995
BspQI GCTCTTC 2 cut(s) 342, 1821
BsrBI CCGCTC 1 cut(s) 232
BsrI ACTGG 8 cut(s) 525, 755, 919, 955, 1369, 1513, 1534, 1814
BssECI CCNNGG 6 cut(s) 330, 775, 776, 803, 1169, 1727
BssMI GATC 9 cut(s) 42, 115, 649, 799, 1043, 1466, 1474, 1533, 1987
BssNAI GTATAC 1 cut(s) 708
BssT1I CCWWGG 2 cut(s) 803, 1169
Bst1107I GTATAC 1 cut(s) 708
Bst2UI CCWGG 5 cut(s) 777, 1728, 1794, 1888, 1896
Bst4CI ACNGT 2 cut(s) 344, 1721
Bst6I CTCTTC 5 cut(s) 141, 213, 342, 1168, 1821
BstAPI GCANNNNNTGC 1 cut(s) 1640
BstC8I GCNNGC 7 cut(s) 396, 856, 860, 1313, 1506, 1585, 1714
BstDEI CTNAG 8 cut(s) 375, 552, 1051, 1253, 1289, 1579, 1841, 2085
BstDSI CCRYGG 1 cut(s) 330
BstF5I GGATG 9 cut(s) 75, 625, 949, 959, 1349, 1508, 1592, 1896, 1951
BstH2I RGCGCY 1 cut(s) 1324
BstHHI GCGC 2 cut(s) 1323, 1545
BstKTI GATC 9 cut(s) 45, 118, 652, 802, 1046, 1469, 1477, 1536, 1990
BstMAI GTCTC 2 cut(s) 941, 1041
BstMBI GATC 9 cut(s) 42, 115, 649, 799, 1043, 1466, 1474, 1533, 1987
BstMWI GCNNNNNNNGC 9 cut(s) 404, 586, 1195, 1391, 1640, 1676, 1837, 1969, 1999
BstNI CCWGG 5 cut(s) 777, 1728, 1794, 1888, 1896
BstNSI RCATGY 2 cut(s) 291, 1186
BstSCI CCNGG 8 cut(s) 775, 834, 1228, 1397, 1726, 1792, 1886, 1894
BstSFI CTRYAG 3 cut(s) 138, 856, 1559
BstSLI GKGCMC 1 cut(s) 764
BstX2I RGATCY 3 cut(s) 1466, 1474, 1533
BstXI CCANNNNNNTGG 1 cut(s) 1356
BstYI RGATCY 3 cut(s) 1466, 1474, 1533
BstZ17I GTATAC 1 cut(s) 708
BsuI GTATCC 1 cut(s) 651
BsuRI GGCC 3 cut(s) 107, 854, 1504
BtgI CCRYGG 1 cut(s) 330
BtgZI GCGATG 2 cut(s) 1189, 1289
BtsCI GGATG 9 cut(s) 75, 625, 949, 959, 1349, 1508, 1592, 1896, 1951
BtsI GCAGTG 2 cut(s) 13, 2009
BtsIMutI CAGTG 5 cut(s) 13, 33, 340, 1362, 2009
BveI ACCTGC 5 cut(s) 434, 469, 1227, 1566, 1750
Cac8I GCNNGC 7 cut(s) 396, 856, 860, 1313, 1506, 1585, 1714
CaiI CAGNNNCTG 3 cut(s) 1025, 1649, 1901
CciI TCATGA 2 cut(s) 154, 234
CfoI GCGC 2 cut(s) 1323, 1545
Cfr13I GGNCC 3 cut(s) 852, 1502, 2024
Csp6I GTAC 2 cut(s) 922, 1286
CviQI GTAC 2 cut(s) 922, 1286
DdeI CTNAG 8 cut(s) 375, 552, 1051, 1253, 1289, 1579, 1841, 2085
DpnI GATC 9 cut(s) 44, 117, 651, 801, 1045, 1468, 1476, 1535, 1989
DpnII GATC 9 cut(s) 42, 115, 649, 799, 1043, 1466, 1474, 1533, 1987
Eam1104I CTCTTC 5 cut(s) 141, 213, 342, 1168, 1821
EarI CTCTTC 5 cut(s) 141, 213, 342, 1168, 1821
Eco130I CCWWGG 2 cut(s) 803, 1169
Eco24I GRGCYC 1 cut(s) 1790
Eco32I GATATC 1 cut(s) 1338
Eco47I GGWCC 1 cut(s) 2024
Eco47III AGCGCT 1 cut(s) 1322
Eco57I CTGAAG 2 cut(s) 354, 1365
Eco88I CYCGRG 1 cut(s) 1967
EcoO109I RGGNCCY 1 cut(s) 852
EcoRII CCWGG 5 cut(s) 775, 1726, 1792, 1886, 1894
EcoRV GATATC 1 cut(s) 1338
EcoT14I CCWWGG 2 cut(s) 803, 1169
EcoT22I ATGCAT 1 cut(s) 1636
EcoT38I GRGCYC 1 cut(s) 1790
ErhI CCWWGG 2 cut(s) 803, 1169
Esp3I CGTCTC 1 cut(s) 1041
FaqI GGGAC 2 cut(s) 987, 1554
FbaI TGATCA 1 cut(s) 42
FblI GTMKAC 1 cut(s) 707
FokI GGATG 9 cut(s) 82, 632, 956, 966, 1336, 1495, 1579, 1903, 1958
FriOI GRGCYC 1 cut(s) 1790
FspBI CTAG 6 cut(s) 119, 960, 1170, 1260, 1472, 1638
GlaI GCGC 2 cut(s) 1322, 1544
GsaI CCCAGC 1 cut(s) 1575
HaeII RGCGCY 1 cut(s) 1324
HaeIII GGCC 3 cut(s) 107, 854, 1504
HapII CCGG 3 cut(s) 836, 1230, 1398
HhaI GCGC 2 cut(s) 1323, 1545
Hin6I GCGC 2 cut(s) 1321, 1543
HinP1I GCGC 2 cut(s) 1321, 1543
HindIII AAGCTT 1 cut(s) 495
HinfI GANTC 5 cut(s) 1147, 1402, 1687, 1748, 1863
HpaII CCGG 3 cut(s) 836, 1230, 1398
HphI GGTGA 3 cut(s) 458, 902, 1731
Hpy166II GTNNAC 3 cut(s) 708, 772, 1438
Hpy188I TCNGA 9 cut(s) 112, 322, 553, 645, 845, 1041, 1692, 1780, 1868
Hpy8I GTNNAC 3 cut(s) 708, 772, 1438
Hpy99I CGWCG 1 cut(s) 1156
HpyAV CCTTC 8 cut(s) 36, 59, 180, 487, 569, 957, 1389, 1968
HpyCH4III ACNGT 2 cut(s) 344, 1721
HpyCH4IV ACGT 2 cut(s) 264, 1217
HpyF10VI GCNNNNNNNGC 9 cut(s) 404, 586, 1195, 1391, 1640, 1676, 1837, 1969, 1999
HpyF3I CTNAG 8 cut(s) 375, 552, 1051, 1253, 1289, 1579, 1841, 2085
HpySE526I ACGT 2 cut(s) 264, 1217
HspAI GCGC 2 cut(s) 1321, 1543
Ksp22I TGATCA 1 cut(s) 42
Kzo9I GATC 9 cut(s) 42, 115, 649, 799, 1043, 1466, 1474, 1533, 1987
LguI GCTCTTC 2 cut(s) 342, 1821
LmnI GCTCC 8 cut(s) 49, 1157, 1625, 1885, 2040, 2050, 2065, 2071
MaeI CTAG 6 cut(s) 119, 960, 1170, 1260, 1472, 1638
MaeII ACGT 2 cut(s) 264, 1217
MaeIII GTNAC 2 cut(s) 446, 1515
MalI GATC 9 cut(s) 44, 117, 651, 801, 1045, 1468, 1476, 1535, 1989
MbiI CCGCTC 1 cut(s) 232
MboI GATC 9 cut(s) 42, 115, 649, 799, 1043, 1466, 1474, 1533, 1987
MflI RGATCY 3 cut(s) 1466, 1474, 1533
MhlI GDGCHC 2 cut(s) 764, 1790
MlyI GAGTC 2 cut(s) 1141, 1696
MmeI TCCRAC 2 cut(s) 1550, 1907
Mph1103I ATGCAT 1 cut(s) 1636
MseI TTAA 3 cut(s) 303, 1118, 1760
MspA1I CMGCKG 4 cut(s) 374, 1356, 1646, 1670
MspI CCGG 3 cut(s) 836, 1230, 1398
MspR9I CCNGG 8 cut(s) 777, 836, 1230, 1399, 1728, 1794, 1888, 1896
MvaI CCWGG 5 cut(s) 777, 1728, 1794, 1888, 1896
MwoI GCNNNNNNNGC 9 cut(s) 404, 586, 1195, 1391, 1640, 1676, 1837, 1969, 1999
NciI CCSGG 3 cut(s) 836, 1230, 1399
NdeII GATC 9 cut(s) 42, 115, 649, 799, 1043, 1466, 1474, 1533, 1987
NlaIV GGNNCC 5 cut(s) 13, 853, 1159, 1345, 1535
NmuCI GTSAC 1 cut(s) 446
NsiI ATGCAT 1 cut(s) 1636
NspI RCATGY 2 cut(s) 291, 1186
PagI TCATGA 2 cut(s) 154, 234
PaqCI CACCTGC 3 cut(s) 434, 469, 1750
PasI CCCWGGG 1 cut(s) 776
PciI ACATGT 2 cut(s) 287, 1182
PciSI GCTCTTC 2 cut(s) 342, 1821
PfeI GAWTC 3 cut(s) 1402, 1748, 1863
PflFI GACNNNGTC 1 cut(s) 1150
PflMI CCANNNNNTGG 1 cut(s) 1622
PfoI TCCNGGA 1 cut(s) 1397
PleI GAGTC 2 cut(s) 1141, 1695
PpsI GAGTC 2 cut(s) 1141, 1695
PscI ACATGT 2 cut(s) 287, 1182
Psp6I CCWGG 5 cut(s) 775, 1726, 1792, 1886, 1894
PspFI CCCAGC 1 cut(s) 1571
PspGI CCWGG 5 cut(s) 775, 1726, 1792, 1886, 1894
PspN4I GGNNCC 5 cut(s) 13, 853, 1159, 1345, 1535
PspPI GGNCC 3 cut(s) 852, 1502, 2024
PsrI GAACNNNNNNTAC 2 cut(s) 1911, 1943
PstI CTGCAG 2 cut(s) 860, 1563
PstNI CAGNNNCTG 3 cut(s) 1025, 1649, 1901
PsuI RGATCY 3 cut(s) 1466, 1474, 1533
PsyI GACNNNGTC 1 cut(s) 1150
PvuII CAGCTG 4 cut(s) 374, 1356, 1646, 1670
RsaI GTAC 2 cut(s) 923, 1287
RsaNI GTAC 2 cut(s) 922, 1286
SapI GCTCTTC 2 cut(s) 342, 1821
SaqAI TTAA 3 cut(s) 303, 1118, 1760
Sau3AI GATC 9 cut(s) 42, 115, 649, 799, 1043, 1466, 1474, 1533, 1987
Sau96I GGNCC 3 cut(s) 852, 1502, 2024
SbfI CCTGCAGG 1 cut(s) 860
ScaI AGTACT 1 cut(s) 1287
SchI GAGTC 2 cut(s) 1141, 1696
ScrFI CCNGG 8 cut(s) 777, 836, 1230, 1399, 1728, 1794, 1888, 1896
SdaI CCTGCAGG 1 cut(s) 860
SduI GDGCHC 2 cut(s) 764, 1790
SfcI CTRYAG 3 cut(s) 138, 856, 1559
SinI GGWCC 1 cut(s) 2024
SmlI CTYRAG 2 cut(s) 512, 730
SmoI CTYRAG 2 cut(s) 512, 730
Sse8387I CCTGCAGG 1 cut(s) 860
SsiI CCGC 8 cut(s) 73, 230, 243, 793, 925, 1309, 1684, 2000
SspMI CTAG 6 cut(s) 119, 960, 1170, 1260, 1472, 1638
StyD4I CCNGG 8 cut(s) 775, 834, 1228, 1397, 1726, 1792, 1886, 1894
StyI CCWWGG 2 cut(s) 803, 1169
TaaI ACNGT 2 cut(s) 344, 1721
TaiI ACGT 2 cut(s) 267, 1220
TaqI TCGA 3 cut(s) 473, 1016, 1405
TatI WGTACW 1 cut(s) 1285
TauI GCSGC 4 cut(s) 245, 796, 1311, 2002
TfiI GAWTC 3 cut(s) 1402, 1748, 1863
Tru1I TTAA 3 cut(s) 303, 1118, 1760
Tru9I TTAA 3 cut(s) 303, 1118, 1760
TscAI CASTG 5 cut(s) 13, 40, 347, 1369, 2009
TseFI GTSAC 1 cut(s) 446
Tsp45I GTSAC 1 cut(s) 446
TspDTI ATGAA 4 cut(s) 549, 582, 1568, 1687
TspGWI ACGGA 3 cut(s) 690, 989, 1140
TspRI CASTG 5 cut(s) 13, 40, 347, 1369, 2009
Tth111I GACNNNGTC 1 cut(s) 1150
Van91I CCANNNNNTGG 1 cut(s) 1622
VpaK11BI GGWCC 1 cut(s) 2024
XapI RAATTY 1 cut(s) 678
XbaI TCTAGA 2 cut(s) 118, 1471
XceI RCATGY 2 cut(s) 291, 1186
XcmI CCANNNNNNNNNTGG 1 cut(s) 2015
XmaJI CCTAGG 1 cut(s) 1169
XmiI GTMKAC 1 cut(s) 707
XspI CTAG 6 cut(s) 119, 960, 1170, 1260, 1472, 1638
ZrmI AGTACT 1 cut(s) 1287
Zsp2I ATGCAT 1 cut(s) 1636
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.