Prupe.6G082200_v2.0.a1

Belongs to the actin-binding proteins ADF family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
5547262 .. 5550053
2792 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G082200.1

Sequence Viewer

Length: 420 bp
ATGGCTAATGCAGCGTCGGGATTTGCTGTGGATGATGACTGCAAGCTGAAGTTTCTGGAATTGAAGGCTAAAAGAACGTACCGCTTCATAGTATTCAAGATTGAGGAGGAGCAAAAGCAGGTGATTGTGGAGAAACTTGGCGAGCCAGCTGAAAGCTATGAAAACTTTACTGCAAGCCTTCCCGCTGATGAATGCAGATATGCTGTCTATGATTTTGACTTTGTGACTGAGGAGAATTGTCAGAAAAGCAGGATTTTCTTCATTGCATGGTCTCCTGATACATCAAGGGTGAGAAGCAAGATGATTTATGCAAGCTCCAAGGACAGGTTCAAGAGAGAACTGGATGGTATACAAGTAGAGCTGCAGGCTACTGATCCGACTGAGATTGGTCTTGATGTTATCAAAAGTCGTGCCAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

140

Amino Acids

15.98

Weight (kDa)

5.03

Isoelectric Point (pI)

46.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015793)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g35350
malus_domestica MD03G1098000.v1.1 MD11G1144300.v1.1 MD11G1144400.v1.1
prunus_persica Prupe.6G082200_v2.0.a1
pyrus_communis pycom03g08080
rosa_chinensis RchiOBHm_Chr5g0063461
rosa_laevigata RLG00000035636
rosa_multiflora Rmu_sc0016394.1_g000004
rosa_roxburghii Rroxscaffold_1G00017260
rosa_rugosa Rorug05G0357500
rosa_samantha Rh5BG431700 Rh5CG455000 Rh5DG445200
rosa_wichuraiana Rw5G039130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 109
Acc36I ACCTGC 1 cut(s) 109
AccI GTMKAC 1 cut(s) 349
AciI CCGC 2 cut(s) 82, 183
AclWI GGATC 1 cut(s) 368
AcuI CTGAAG 1 cut(s) 68
AfaI GTAC 1 cut(s) 80
AfiI CCNNNNNNNGG 1 cut(s) 324
AgsI TTSAA 3 cut(s) 64, 97, 331
AjuI GAANNNNNNNTTGG 2 cut(s) 311, 343
AluBI AGCT 6 cut(s) 46, 149, 156, 315, 361, 417
AluI AGCT 6 cut(s) 46, 149, 156, 315, 361, 417
Alw26I GTCTC 1 cut(s) 276
AlwI GGATC 1 cut(s) 368
ApeKI GCWGC 2 cut(s) 11, 361
AsuHPI GGTGA 2 cut(s) 133, 301
BbvI GCAGC 2 cut(s) 23, 348
BccI CCATC 1 cut(s) 338
BcoDI GTCTC 1 cut(s) 276
BfmI CTRYAG 1 cut(s) 362
BfuAI ACCTGC 1 cut(s) 109
BisI GCNGC 2 cut(s) 12, 362
BlsI GCNGC 2 cut(s) 13, 363
BsaI GGTCTC 1 cut(s) 276
BsaJI CCNNGG 1 cut(s) 318
Bsc4I CCNNNNNNNGG 1 cut(s) 324
Bse1I ACTGG 1 cut(s) 345
Bse3DI GCAATG 1 cut(s) 261
BseDI CCNNGG 1 cut(s) 318
BseGI GGATG 2 cut(s) 37, 349
BseLI CCNNNNNNNGG 1 cut(s) 324
BseMI GCAATG 1 cut(s) 261
BseMII CTCAG 2 cut(s) 219, 372
BseNI ACTGG 1 cut(s) 345
BseRI GAGGAG 3 cut(s) 119, 122, 245
BseXI GCAGC 2 cut(s) 23, 348
BslI CCNNNNNNNGG 1 cut(s) 324
BsmAI GTCTC 1 cut(s) 276
BsmI GAATGC 1 cut(s) 197
Bso31I GGTCTC 1 cut(s) 276
Bsp143I GATC 1 cut(s) 373
BspACI CCGC 2 cut(s) 82, 183
BspCNI CTCAG 2 cut(s) 220, 373
BspMAI CTGCAG 1 cut(s) 366
BspMI ACCTGC 1 cut(s) 109
BspPI GGATC 1 cut(s) 368
BspTNI GGTCTC 1 cut(s) 276
BsrDI GCAATG 1 cut(s) 261
BsrI ACTGG 1 cut(s) 345
BssECI CCNNGG 1 cut(s) 318
BssMI GATC 1 cut(s) 373
BssNAI GTATAC 1 cut(s) 350
BssT1I CCWWGG 1 cut(s) 318
Bst1107I GTATAC 1 cut(s) 350
BstC8I GCNNGC 7 cut(s) 44, 143, 147, 175, 313, 366, 415
BstDEI CTNAG 2 cut(s) 228, 381
BstF5I GGATG 2 cut(s) 37, 349
BstKTI GATC 1 cut(s) 376
BstMAI GTCTC 1 cut(s) 276
BstMBI GATC 1 cut(s) 373
BstMWI GCNNNNNNNGC 1 cut(s) 11
BstSFI CTRYAG 1 cut(s) 362
BstV1I GCAGC 2 cut(s) 23, 348
BstZ17I GTATAC 1 cut(s) 350
BtsCI GGATG 2 cut(s) 37, 349
BveI ACCTGC 1 cut(s) 109
Cac8I GCNNGC 7 cut(s) 44, 143, 147, 175, 313, 366, 415
CseI GACGC 1 cut(s) 3
Csp6I GTAC 1 cut(s) 79
CviAII CATG 1 cut(s) 267
CviQI GTAC 1 cut(s) 79
DdeI CTNAG 2 cut(s) 228, 381
DpnI GATC 1 cut(s) 375
DpnII GATC 1 cut(s) 373
Eco130I CCWWGG 1 cut(s) 318
Eco31I GGTCTC 1 cut(s) 276
Eco57I CTGAAG 1 cut(s) 68
EcoT14I CCWWGG 1 cut(s) 318
ErhI CCWWGG 1 cut(s) 318
FaeI CATG 1 cut(s) 270
FaiI YATR 7 cut(s) 89, 159, 201, 210, 268, 309, 350
FatI CATG 1 cut(s) 266
FauI CCCGC 1 cut(s) 190
FblI GTMKAC 1 cut(s) 349
Fnu4HI GCNGC 2 cut(s) 12, 362
FokI GGATG 2 cut(s) 44, 356
Fsp4HI GCNGC 2 cut(s) 12, 362
GluI GCNGC 2 cut(s) 12, 362
HgaI GACGC 1 cut(s) 3
Hin1II CATG 1 cut(s) 270
HphI GGTGA 2 cut(s) 133, 301
Hpy166II GTNNAC 1 cut(s) 350
Hpy188I TCNGA 2 cut(s) 243, 378
Hpy188III TCNNGA 6 cut(s) 18, 56, 97, 275, 331, 392
Hpy8I GTNNAC 1 cut(s) 350
Hpy99I CGWCG 1 cut(s) 19
HpyAV CCTTC 2 cut(s) 58, 188
HpyCH4IV ACGT 1 cut(s) 77
HpyCH4V TGCA 7 cut(s) 11, 42, 173, 195, 266, 311, 364
HpyF10VI GCNNNNNNNGC 1 cut(s) 11
HpyF3I CTNAG 2 cut(s) 228, 381
HpySE526I ACGT 1 cut(s) 77
Hsp92II CATG 1 cut(s) 270
Kzo9I GATC 1 cut(s) 373
LmnI GCTCC 2 cut(s) 109, 320
LpnPI CCDG 8 cut(s) 41, 104, 159, 235, 288, 310, 326, 350
Lsp1109I GCAGC 2 cut(s) 23, 348
MaeII ACGT 1 cut(s) 77
MaeIII GTNAC 1 cut(s) 223
MalI GATC 1 cut(s) 375
MboI GATC 1 cut(s) 373
MboII GAAGA 1 cut(s) 250
MluCI AATT 2 cut(s) 59, 235
MmeI TCCRAC 1 cut(s) 401
MnlI CCTC 3 cut(s) 97, 100, 223
MspA1I CMGCKG 2 cut(s) 149, 185
Mva1269I GAATGC 1 cut(s) 197
MwoI GCNNNNNNNGC 1 cut(s) 11
NdeII GATC 1 cut(s) 373
NlaIII CATG 1 cut(s) 270
NmuCI GTSAC 1 cut(s) 223
PaqCI CACCTGC 1 cut(s) 109
PctI GAATGC 1 cut(s) 197
PkrI GCNGC 2 cut(s) 13, 363
PstI CTGCAG 1 cut(s) 366
PvuII CAGCTG 1 cut(s) 149
RsaI GTAC 1 cut(s) 80
RsaNI GTAC 1 cut(s) 79
SatI GCNGC 2 cut(s) 12, 362
Sau3AI GATC 1 cut(s) 373
SetI ASST 9 cut(s) 48, 80, 123, 151, 158, 317, 329, 363, 419
SfcI CTRYAG 1 cut(s) 362
Sse9I AATT 2 cut(s) 59, 235
SsiI CCGC 2 cut(s) 82, 183
StyI CCWWGG 1 cut(s) 318
TaiI ACGT 1 cut(s) 80
TasI AATT 2 cut(s) 59, 235
TseFI GTSAC 1 cut(s) 223
TseI GCWGC 2 cut(s) 11, 361
Tsp45I GTSAC 1 cut(s) 223
TspDTI ATGAA 4 cut(s) 76, 174, 204, 250
XmiI GTMKAC 1 cut(s) 349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.