No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G60400 AT5G60400 AT5G60400 |
| fragaria_vesca | FvH4_3g33040 |
| malus_domestica | MD03G1112500.v1.1 MD11G1131400.v1.1 |
| prunus_persica | Prupe.6G095800_v2.0.a1 Prupe.6G096000_v2.0.a1 |
| pyrus_communis | pycom11g10860 |
| rosa_chinensis | RchiOBHm_Chr5g0060411 |
| rosa_multiflora | Rmu_sc0003270.1_g000013 |
| rosa_roxburghii | Rroxscaffold_1G00020420 |
| rosa_rugosa | Rorug05G0329700 |
| rosa_samantha | Rh5AG394400 Rh5BG406600 Rh5CG430400 Rh5DG421700 |
| rosa_wichuraiana | Rw5G037100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 135 |
| AfaI | GTAC | 1 cut(s) | 226 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 69 |
| AluBI | AGCT | 2 cut(s) | 97, 185 |
| AluI | AGCT | 2 cut(s) | 97, 185 |
| Alw26I | GTCTC | 1 cut(s) | 141 |
| AoxI | GGCC | 1 cut(s) | 60 |
| ApeKI | GCWGC | 2 cut(s) | 97, 132 |
| AsuHPI | GGTGA | 1 cut(s) | 10 |
| BbvI | GCAGC | 2 cut(s) | 84, 144 |
| BccI | CCATC | 2 cut(s) | 15, 28 |
| BcoDI | GTCTC | 1 cut(s) | 141 |
| BfaI | CTAG | 2 cut(s) | 182, 186 |
| BglII | AGATCT | 1 cut(s) | 178 |
| BisI | GCNGC | 2 cut(s) | 98, 133 |
| BlsI | GCNGC | 2 cut(s) | 99, 134 |
| BmrI | ACTGGG | 1 cut(s) | 125 |
| BmuI | ACTGGG | 1 cut(s) | 125 |
| BsaBI | GATNNNNATC | 2 cut(s) | 45, 177 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 69 |
| Bse1I | ACTGG | 1 cut(s) | 120 |
| Bse8I | GATNNNNATC | 2 cut(s) | 45, 177 |
| BseJI | GATNNNNATC | 2 cut(s) | 45, 177 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 69 |
| BseNI | ACTGG | 1 cut(s) | 120 |
| BseXI | GCAGC | 2 cut(s) | 84, 144 |
| BshFI | GGCC | 1 cut(s) | 62 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 69 |
| BsmAI | GTCTC | 1 cut(s) | 141 |
| BsnI | GGCC | 1 cut(s) | 62 |
| Bsp143I | GATC | 4 cut(s) | 40, 46, 77, 178 |
| BspACI | CCGC | 1 cut(s) | 135 |
| BspANI | GGCC | 1 cut(s) | 62 |
| BspHI | TCATGA | 1 cut(s) | 43 |
| BsrI | ACTGG | 1 cut(s) | 120 |
| BssMI | GATC | 4 cut(s) | 40, 46, 77, 178 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 236 |
| BstDEI | CTNAG | 1 cut(s) | 27 |
| BstKTI | GATC | 4 cut(s) | 43, 49, 80, 181 |
| BstMAI | GTCTC | 1 cut(s) | 141 |
| BstMBI | GATC | 4 cut(s) | 40, 46, 77, 178 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 138, 227, 236 |
| BstV1I | GCAGC | 2 cut(s) | 84, 144 |
| BstX2I | RGATCY | 1 cut(s) | 178 |
| BstYI | RGATCY | 1 cut(s) | 178 |
| BsuRI | GGCC | 1 cut(s) | 62 |
| CciI | TCATGA | 1 cut(s) | 43 |
| Csp6I | GTAC | 1 cut(s) | 225 |
| CviAII | CATG | 4 cut(s) | 44, 64, 157, 197 |
| CviJI | RGCY | 5 cut(s) | 62, 86, 97, 185, 221 |
| CviKI_1 | RGCY | 5 cut(s) | 62, 86, 97, 185, 221 |
| CviQI | GTAC | 1 cut(s) | 225 |
| DdeI | CTNAG | 1 cut(s) | 27 |
| DpnI | GATC | 4 cut(s) | 42, 48, 79, 180 |
| DpnII | GATC | 4 cut(s) | 40, 46, 77, 178 |
| FaeI | CATG | 4 cut(s) | 47, 67, 160, 200 |
| FaiI | YATR | 6 cut(s) | 45, 65, 102, 158, 198, 203 |
| FatI | CATG | 4 cut(s) | 43, 63, 156, 196 |
| Fnu4HI | GCNGC | 2 cut(s) | 98, 133 |
| Fsp4HI | GCNGC | 2 cut(s) | 98, 133 |
| FspBI | CTAG | 2 cut(s) | 182, 186 |
| GluI | GCNGC | 2 cut(s) | 98, 133 |
| HaeIII | GGCC | 1 cut(s) | 62 |
| Hin1II | CATG | 4 cut(s) | 47, 67, 160, 200 |
| HphI | GGTGA | 1 cut(s) | 10 |
| Hpy188III | TCNNGA | 2 cut(s) | 44, 110 |
| HpyAV | CCTTC | 2 cut(s) | 31, 155 |
| HpyCH4V | TGCA | 3 cut(s) | 100, 210, 230 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 138, 227, 236 |
| HpyF3I | CTNAG | 1 cut(s) | 27 |
| Hsp92II | CATG | 4 cut(s) | 47, 67, 160, 200 |
| Kzo9I | GATC | 4 cut(s) | 40, 46, 77, 178 |
| LpnPI | CCDG | 2 cut(s) | 100, 101 |
| Lsp1109I | GCAGC | 2 cut(s) | 84, 144 |
| MaeI | CTAG | 2 cut(s) | 182, 186 |
| MalI | GATC | 4 cut(s) | 42, 48, 79, 180 |
| MboI | GATC | 4 cut(s) | 40, 46, 77, 178 |
| MboII | GAAGA | 1 cut(s) | 188 |
| MflI | RGATCY | 1 cut(s) | 178 |
| MnlI | CCTC | 1 cut(s) | 52 |
| MspA1I | CMGCKG | 1 cut(s) | 135 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 138, 227, 236 |
| NdeII | GATC | 4 cut(s) | 40, 46, 77, 178 |
| NlaIII | CATG | 4 cut(s) | 47, 67, 160, 200 |
| PagI | TCATGA | 1 cut(s) | 43 |
| PkrI | GCNGC | 2 cut(s) | 99, 134 |
| PsuI | RGATCY | 1 cut(s) | 178 |
| RsaI | GTAC | 1 cut(s) | 226 |
| RsaNI | GTAC | 1 cut(s) | 225 |
| SatI | GCNGC | 2 cut(s) | 98, 133 |
| Sau3AI | GATC | 4 cut(s) | 40, 46, 77, 178 |
| SetI | ASST | 4 cut(s) | 23, 99, 166, 187 |
| SsiI | CCGC | 1 cut(s) | 135 |
| SspMI | CTAG | 2 cut(s) | 182, 186 |
| TatI | WGTACW | 1 cut(s) | 224 |
| TseI | GCWGC | 2 cut(s) | 97, 132 |
| TspDTI | ATGAA | 2 cut(s) | 80, 189 |
| XspI | CTAG | 2 cut(s) | 182, 186 |