Prupe.6G194800_v2.0.a1

Protein of unknown function, DUF617

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
20191717 .. 20192535
819 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G194800.1

Sequence Viewer

Length: 735 bp
ATGGCCTATCCAAGAGTTGGTGCCACAACCATAACCACCGGTGTCACCACCGTGGACTGCCAGAAACAAGTCAGGTCGTGGCGGCTTCTTCGCTCTCTCATCGAACTTCTAATCCCAACTTGCAATTGCACCTTCATAGAAGATCATGATCAAGATCAACTACAAGCCAAACAAGAACAACAAAAAAGCCACGCCAACAACTACTACTATCCCCACTATCCCCAACCCAGCTTTGCTTGTTCCAACAACATCATAACCGGCACCATATTCGGGTACCGAAGAGGCAAAGTTAGCTTCTGTATCCAAACAAACTCCAAGTCCAATCCAATTCTACTTCTTGAATTAGCTTTGCCCACAACGGTTCTAGCTAAAGAAATGCAAGGCGGGTTTCTTAGAATAGCACTCGAGTCTACTAGCCCAGGAAATGGTGCTAGTACTAATTCTAATTCTCTTTTGGCCACACCTGTATGGACCATGTATTGCAATAGTAGAAAAGTTGGGTACGCAATCAAGCGCAGGCCTTCAGAACATGACTGGGAAGCACTGAGGATGATGGGTTCAGTTGTTGTTGGTGCTGGAATTATAAGTGGTAATAAGGAGGATGATGAGATTATGTACCTCAGAGCCAACTTTGAGAGAGTTTGTGGTTCAGCTAATTCTGAGTCCTTCCATTTGATTGACCCAGATGAGAGTATTGGCCAGGAGCTTAGTATTTTCCTTTATCGTTCAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

245

Amino Acids

27.31

Weight (kDa)

7.59

Isoelectric Point (pI)

51.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015260)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22460 AT5G65340
fragaria_vesca FvH4_1g20130
malus_domestica MD15G1317100.v1.1
prunus_persica Prupe.6G194800_v2.0.a1
pyrus_communis pycom15g27970
rosa_chinensis RchiOBHm_Chr2g0112181
rosa_laevigata RLG00000017956
rosa_multiflora Rmu_sc0000360.1_g000039
rosa_roxburghii Rroxscaffold_2G00131710
rosa_rugosa Rorug02G0178900
rosa_samantha Rh2AG231100 Rh2BG244100 Rh2CG235500 Rh2DG238900
rosa_wichuraiana Rw2G017910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 584
Acc65I GGTACC 1 cut(s) 273
AccB1I GGYRCC 3 cut(s) 20, 260, 273
AccB7I CCANNNNNTGG 2 cut(s) 17, 425
AccI GTMKAC 1 cut(s) 410
AciI CCGC 2 cut(s) 82, 384
AcoI YGGCCR 2 cut(s) 456, 697
AcuI CTGAAG 1 cut(s) 507
AfaI GTAC 4 cut(s) 275, 436, 503, 617
AfiI CCNNNNNNNGG 3 cut(s) 17, 270, 425
AgeI ACCGGT 1 cut(s) 38
AgsI TTSAA 2 cut(s) 341, 729
AjnI CCWGG 2 cut(s) 418, 699
AleI CACNNNNGTG 1 cut(s) 50
AloI GAACNNNNNNTCC 4 cut(s) 96, 128, 541, 573
AluBI AGCT 6 cut(s) 231, 294, 347, 368, 653, 706
AluI AGCT 6 cut(s) 231, 294, 347, 368, 653, 706
Ama87I CYCGRG 1 cut(s) 404
AoxI GGCC 4 cut(s) 3, 456, 518, 697
ArsI GACNNNNNNTTYG 2 cut(s) 302, 334
AsiGI ACCGGT 1 cut(s) 38
Asp718I GGTACC 1 cut(s) 273
AspLEI GCGC 1 cut(s) 516
AspS9I GGNCC 1 cut(s) 471
AsuHPI GGTGA 1 cut(s) 37
AvaI CYCGRG 1 cut(s) 404
AvaII GGWCC 1 cut(s) 471
BalI TGGCCA 2 cut(s) 458, 699
BanI GGYRCC 3 cut(s) 20, 260, 273
BccI CCATC 1 cut(s) 547
BcgI CGANNNNNNTGC 2 cut(s) 250, 284
BciT130I CCWGG 2 cut(s) 420, 701
BciVI GTATCC 1 cut(s) 311
BclI TGATCA 1 cut(s) 148
BfaI CTAG 3 cut(s) 365, 414, 432
BfuI GTATCC 1 cut(s) 311
BisI GCNGC 1 cut(s) 83
BlsI GCNGC 1 cut(s) 84
BmcAI AGTACT 1 cut(s) 436
Bme1390I CCNGG 2 cut(s) 420, 701
Bme18I GGWCC 1 cut(s) 471
BmeT110I CYCGRG 1 cut(s) 404
BmgT120I GGNCC 1 cut(s) 471
BmiI GGNNCC 3 cut(s) 22, 262, 275
BmrFI CCNGG 2 cut(s) 420, 701
BmrI ACTGGG 1 cut(s) 544
BmuI ACTGGG 1 cut(s) 544
BsaBI GATNNNNATC 2 cut(s) 147, 153
BsaJI CCNNGG 2 cut(s) 51, 418
BsaWI WCCGGW 1 cut(s) 38
Bsc4I CCNNNNNNNGG 3 cut(s) 17, 270, 425
Bse118I RCCGGY 2 cut(s) 38, 257
Bse1I ACTGG 1 cut(s) 539
Bse8I GATNNNNATC 2 cut(s) 147, 153
BseBI CCWGG 2 cut(s) 420, 701
BseDI CCNNGG 2 cut(s) 51, 418
BseGI GGATG 2 cut(s) 555, 607
BseJI GATNNNNATC 2 cut(s) 147, 153
BseLI CCNNNNNNNGG 3 cut(s) 17, 270, 425
BseMII CTCAG 3 cut(s) 536, 634, 651
BseNI ACTGG 1 cut(s) 539
BseYI CCCAGC 1 cut(s) 227
BshFI GGCC 4 cut(s) 5, 458, 520, 699
BshNI GGYRCC 3 cut(s) 20, 260, 273
BshTI ACCGGT 1 cut(s) 38
BsiHKCI CYCGRG 1 cut(s) 404
BsiSI CCGG 2 cut(s) 39, 258
BslI CCNNNNNNNGG 3 cut(s) 17, 270, 425
BsnI GGCC 4 cut(s) 5, 458, 520, 699
BsoBI CYCGRG 1 cut(s) 404
Bsp143I GATC 3 cut(s) 142, 148, 154
BspACI CCGC 2 cut(s) 82, 384
BspANI GGCC 4 cut(s) 5, 458, 520, 699
BspCNI CTCAG 3 cut(s) 537, 633, 652
BspHI TCATGA 1 cut(s) 145
BspLI GGNNCC 3 cut(s) 22, 262, 275
BspT107I GGYRCC 3 cut(s) 20, 260, 273
BsrFI RCCGGY 2 cut(s) 38, 257
BsrI ACTGG 1 cut(s) 539
BssAI RCCGGY 2 cut(s) 38, 257
BssECI CCNNGG 2 cut(s) 51, 418
BssMI GATC 3 cut(s) 142, 148, 154
Bst2UI CCWGG 2 cut(s) 420, 701
Bst4CI ACNGT 2 cut(s) 52, 361
Bst6I CTCTTC 1 cut(s) 274
BstC8I GCNNGC 1 cut(s) 518
BstDEI CTNAG 5 cut(s) 392, 545, 620, 660, 707
BstDSI CCRYGG 1 cut(s) 51
BstF5I GGATG 2 cut(s) 555, 607
BstHHI GCGC 1 cut(s) 516
BstKTI GATC 3 cut(s) 145, 151, 157
BstMBI GATC 3 cut(s) 142, 148, 154
BstMWI GCNNNNNNNGC 1 cut(s) 291
BstNI CCWGG 2 cut(s) 420, 701
BstSCI CCNGG 2 cut(s) 418, 699
BsuI GTATCC 1 cut(s) 311
BsuRI GGCC 4 cut(s) 5, 458, 520, 699
BtgI CCRYGG 1 cut(s) 51
BtsCI GGATG 2 cut(s) 555, 607
BtsIMutI CAGTG 1 cut(s) 542
Cac8I GCNNGC 1 cut(s) 518
CciI TCATGA 1 cut(s) 145
CfoI GCGC 1 cut(s) 516
Cfr10I RCCGGY 2 cut(s) 38, 257
Cfr13I GGNCC 1 cut(s) 471
Csp6I GTAC 4 cut(s) 274, 435, 502, 616
CspAI ACCGGT 1 cut(s) 38
CviAII CATG 3 cut(s) 146, 475, 530
CviQI GTAC 4 cut(s) 274, 435, 502, 616
DdeI CTNAG 5 cut(s) 392, 545, 620, 660, 707
DpnI GATC 3 cut(s) 144, 150, 156
DpnII GATC 3 cut(s) 142, 148, 154
EaeI YGGCCR 2 cut(s) 456, 697
Eam1104I CTCTTC 1 cut(s) 274
EarI CTCTTC 1 cut(s) 274
Eco147I AGGCCT 1 cut(s) 520
Eco47I GGWCC 1 cut(s) 471
Eco57I CTGAAG 1 cut(s) 507
Eco88I CYCGRG 1 cut(s) 404
EcoRII CCWGG 2 cut(s) 418, 699
FaeI CATG 3 cut(s) 149, 478, 533
FatI CATG 3 cut(s) 145, 474, 529
FauI CCCGC 1 cut(s) 377
FbaI TGATCA 1 cut(s) 148
FblI GTMKAC 1 cut(s) 410
Fnu4HI GCNGC 1 cut(s) 83
FokI GGATG 2 cut(s) 562, 614
Fsp4HI GCNGC 1 cut(s) 83
FspBI CTAG 3 cut(s) 365, 414, 432
GlaI GCGC 1 cut(s) 515
GluI GCNGC 1 cut(s) 83
GsaI CCCAGC 1 cut(s) 231
HaeIII GGCC 4 cut(s) 5, 458, 520, 699
HapII CCGG 2 cut(s) 39, 258
HhaI GCGC 1 cut(s) 516
Hin1II CATG 3 cut(s) 149, 478, 533
Hin6I GCGC 1 cut(s) 514
HinP1I GCGC 1 cut(s) 514
HinfI GANTC 2 cut(s) 407, 662
HpaII CCGG 2 cut(s) 39, 258
HphI GGTGA 1 cut(s) 37
Hpy166II GTNNAC 2 cut(s) 55, 411
Hpy188I TCNGA 3 cut(s) 526, 623, 661
Hpy188III TCNNGA 3 cut(s) 146, 152, 338
Hpy8I GTNNAC 2 cut(s) 55, 411
HpyAV CCTTC 3 cut(s) 142, 531, 676
HpyCH4III ACNGT 2 cut(s) 52, 361
HpyCH4V TGCA 4 cut(s) 123, 129, 379, 483
HpyF10VI GCNNNNNNNGC 1 cut(s) 291
HpyF3I CTNAG 5 cut(s) 392, 545, 620, 660, 707
Hsp92II CATG 3 cut(s) 149, 478, 533
HspAI GCGC 1 cut(s) 514
KpnI GGTACC 1 cut(s) 277
Ksp22I TGATCA 1 cut(s) 148
Kzo9I GATC 3 cut(s) 142, 148, 154
LmnI GCTCC 1 cut(s) 703
MaeI CTAG 3 cut(s) 365, 414, 432
MaeIII GTNAC 1 cut(s) 43
MalI GATC 3 cut(s) 144, 150, 156
MboI GATC 3 cut(s) 142, 148, 154
MboII GAAGA 3 cut(s) 80, 152, 291
MfeI CAATTG 1 cut(s) 124
MlsI TGGCCA 2 cut(s) 458, 699
MluCI AATT 7 cut(s) 124, 327, 341, 439, 445, 579, 655
MluNI TGGCCA 2 cut(s) 458, 699
MlyI GAGTC 2 cut(s) 416, 671
MmeI TCCRAC 1 cut(s) 267
MnlI CCTC 4 cut(s) 275, 540, 592, 629
Mox20I TGGCCA 2 cut(s) 458, 699
MscI TGGCCA 2 cut(s) 458, 699
MslI CAYNNNNRTG 2 cut(s) 50, 466
Msp20I TGGCCA 2 cut(s) 458, 699
MspI CCGG 2 cut(s) 39, 258
MspR9I CCNGG 2 cut(s) 420, 701
MunI CAATTG 1 cut(s) 124
MvaI CCWGG 2 cut(s) 420, 701
MwoI GCNNNNNNNGC 1 cut(s) 291
NdeII GATC 3 cut(s) 142, 148, 154
NlaIII CATG 3 cut(s) 149, 478, 533
NlaIV GGNNCC 3 cut(s) 22, 262, 275
NmuCI GTSAC 1 cut(s) 43
OliI CACNNNNGTG 1 cut(s) 50
PaeR7I CTCGAG 1 cut(s) 404
PagI TCATGA 1 cut(s) 145
PceI AGGCCT 1 cut(s) 520
PflMI CCANNNNNTGG 2 cut(s) 17, 425
PinAI ACCGGT 1 cut(s) 38
PkrI GCNGC 1 cut(s) 84
PleI GAGTC 2 cut(s) 415, 670
PpsI GAGTC 2 cut(s) 415, 670
PsiI TTATAA 1 cut(s) 584
Psp6I CCWGG 2 cut(s) 418, 699
PspFI CCCAGC 1 cut(s) 227
PspGI CCWGG 2 cut(s) 418, 699
PspN4I GGNNCC 3 cut(s) 22, 262, 275
PspPI GGNCC 1 cut(s) 471
PspXI VCTCGAGB 1 cut(s) 404
RsaI GTAC 4 cut(s) 275, 436, 503, 617
RsaNI GTAC 4 cut(s) 274, 435, 502, 616
RseI CAYNNNNRTG 2 cut(s) 50, 466
SatI GCNGC 1 cut(s) 83
Sau3AI GATC 3 cut(s) 142, 148, 154
Sau96I GGNCC 1 cut(s) 471
ScaI AGTACT 1 cut(s) 436
SchI GAGTC 2 cut(s) 416, 671
ScrFI CCNGG 2 cut(s) 420, 701
Sfr274I CTCGAG 1 cut(s) 404
SgrAI CRCCGGYG 1 cut(s) 38
SinI GGWCC 1 cut(s) 471
SlaI CTCGAG 1 cut(s) 404
SmiMI CAYNNNNRTG 2 cut(s) 50, 466
SmlI CTYRAG 1 cut(s) 404
SmoI CTYRAG 1 cut(s) 404
Sse9I AATT 7 cut(s) 124, 327, 341, 439, 445, 579, 655
SseBI AGGCCT 1 cut(s) 520
SsiI CCGC 2 cut(s) 82, 384
SspMI CTAG 3 cut(s) 365, 414, 432
StuI AGGCCT 1 cut(s) 520
StyD4I CCNGG 2 cut(s) 418, 699
TaaI ACNGT 2 cut(s) 52, 361
TaqI TCGA 2 cut(s) 102, 405
TasI AATT 7 cut(s) 124, 327, 341, 439, 445, 579, 655
TatI WGTACW 1 cut(s) 434
TauI GCSGC 1 cut(s) 85
TscAI CASTG 1 cut(s) 549
TseFI GTSAC 1 cut(s) 43
Tsp45I GTSAC 1 cut(s) 43
TspDTI ATGAA 1 cut(s) 124
TspRI CASTG 1 cut(s) 549
Van91I CCANNNNNTGG 2 cut(s) 17, 425
VpaK11BI GGWCC 1 cut(s) 471
XhoI CTCGAG 1 cut(s) 404
XmiI GTMKAC 1 cut(s) 410
XspI CTAG 3 cut(s) 365, 414, 432
ZrmI AGTACT 1 cut(s) 436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.