Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g14870 FvH4_6g14870 FvH4_6g14870 FvH4_6g14870 |
| malus_domestica | MD12G1130200.v1.1 |
| prunus_persica | Prupe.6G245200_v2.0.a1 |
| pyrus_communis | pycom12g12630 |
| rosa_chinensis | RchiOBHm_Chr3g0468081 |
| rosa_laevigata | RLG00000024451 |
| rosa_multiflora | Rmu_sc0012651.1_g000007 |
| rosa_roxburghii | Rroxscaffold_6G00413070 |
| rosa_rugosa | Rorug03G0092400 Rorug03G0092500 |
| rosa_samantha | Rh3AG140900 Rh3BG162300 Rh3BG162400 Rh3CG162100 Rh3CG162200 Rh3DG162700 Rh3DG162800 |
| rosa_wichuraiana | Rw3G013310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 113 |
| AcuI | CTGAAG | 4 cut(s) | 486, 513, 519, 546 |
| AfaI | GTAC | 4 cut(s) | 238, 272, 489, 522 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 113 |
| AgsI | TTSAA | 2 cut(s) | 302, 325 |
| AjnI | CCWGG | 2 cut(s) | 61, 342 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 245, 491 |
| AoxI | GGCC | 1 cut(s) | 480 |
| AseI | ATTAAT | 1 cut(s) | 84 |
| AsuHPI | GGTGA | 1 cut(s) | 191 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 504, 537 |
| BccI | CCATC | 2 cut(s) | 107, 284 |
| BciT130I | CCWGG | 2 cut(s) | 63, 344 |
| BfaI | CTAG | 1 cut(s) | 417 |
| BglII | AGATCT | 1 cut(s) | 304 |
| Bme1390I | CCNGG | 2 cut(s) | 63, 344 |
| BmiI | GGNNCC | 2 cut(s) | 69, 357 |
| BmrFI | CCNGG | 2 cut(s) | 63, 344 |
| BmsI | GCATC | 3 cut(s) | 139, 487, 520 |
| BsaJI | CCNNGG | 4 cut(s) | 62, 160, 342, 459 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 113 |
| Bse1I | ACTGG | 1 cut(s) | 317 |
| BseBI | CCWGG | 2 cut(s) | 63, 344 |
| BseDI | CCNNGG | 4 cut(s) | 62, 160, 342, 459 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 113 |
| BseMII | CTCAG | 4 cut(s) | 87, 237, 400, 498 |
| BseNI | ACTGG | 1 cut(s) | 317 |
| BshFI | GGCC | 1 cut(s) | 482 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 113 |
| BsmI | GAATGC | 1 cut(s) | 96 |
| BsnI | GGCC | 1 cut(s) | 482 |
| Bsp143I | GATC | 2 cut(s) | 304, 434 |
| Bsp19I | CCATGG | 1 cut(s) | 160 |
| BspANI | GGCC | 1 cut(s) | 482 |
| BspCNI | CTCAG | 4 cut(s) | 88, 238, 399, 497 |
| BspLI | GGNNCC | 2 cut(s) | 69, 357 |
| BsrI | ACTGG | 1 cut(s) | 317 |
| BssECI | CCNNGG | 4 cut(s) | 62, 160, 342, 459 |
| BssMI | GATC | 2 cut(s) | 304, 434 |
| BssT1I | CCWWGG | 1 cut(s) | 160 |
| Bst2UI | CCWGG | 2 cut(s) | 63, 344 |
| Bst4CI | ACNGT | 3 cut(s) | 142, 241, 554 |
| Bst6I | CTCTTC | 1 cut(s) | 126 |
| BstC8I | GCNNGC | 1 cut(s) | 72 |
| BstDEI | CTNAG | 4 cut(s) | 96, 246, 386, 484 |
| BstDSI | CCRYGG | 2 cut(s) | 160, 459 |
| BstKTI | GATC | 2 cut(s) | 307, 437 |
| BstMBI | GATC | 2 cut(s) | 304, 434 |
| BstNI | CCWGG | 2 cut(s) | 63, 344 |
| BstSCI | CCNGG | 2 cut(s) | 61, 342 |
| BstX2I | RGATCY | 1 cut(s) | 304 |
| BstYI | RGATCY | 1 cut(s) | 304 |
| BsuRI | GGCC | 1 cut(s) | 482 |
| BtgI | CCRYGG | 2 cut(s) | 160, 459 |
| BtsIMutI | CAGTG | 3 cut(s) | 359, 510, 543 |
| Cac8I | GCNNGC | 1 cut(s) | 72 |
| CaiI | CAGNNNCTG | 2 cut(s) | 245, 491 |
| Csp6I | GTAC | 4 cut(s) | 237, 271, 488, 521 |
| CviAII | CATG | 3 cut(s) | 146, 161, 352 |
| CviJI | RGCY | 7 cut(s) | 34, 70, 267, 374, 431, 452, 482 |
| CviKI_1 | RGCY | 7 cut(s) | 34, 70, 267, 374, 431, 452, 482 |
| CviQI | GTAC | 4 cut(s) | 237, 271, 488, 521 |
| DdeI | CTNAG | 4 cut(s) | 96, 246, 386, 484 |
| DpnI | GATC | 2 cut(s) | 306, 436 |
| DpnII | GATC | 2 cut(s) | 304, 434 |
| Eam1104I | CTCTTC | 1 cut(s) | 126 |
| EarI | CTCTTC | 1 cut(s) | 126 |
| Eco130I | CCWWGG | 1 cut(s) | 160 |
| Eco147I | AGGCCT | 1 cut(s) | 482 |
| Eco57I | CTGAAG | 4 cut(s) | 486, 513, 519, 546 |
| EcoRII | CCWGG | 2 cut(s) | 61, 342 |
| EcoT14I | CCWWGG | 1 cut(s) | 160 |
| ErhI | CCWWGG | 1 cut(s) | 160 |
| FaeI | CATG | 3 cut(s) | 149, 164, 355 |
| FatI | CATG | 3 cut(s) | 145, 160, 351 |
| FspBI | CTAG | 1 cut(s) | 417 |
| HaeIII | GGCC | 1 cut(s) | 482 |
| Hin1II | CATG | 3 cut(s) | 149, 164, 355 |
| HinfI | GANTC | 3 cut(s) | 100, 155, 260 |
| HphI | GGTGA | 1 cut(s) | 191 |
| Hpy188III | TCNNGA | 3 cut(s) | 308, 388, 438 |
| Hpy99I | CGWCG | 1 cut(s) | 43 |
| HpyAV | CCTTC | 4 cut(s) | 45, 185, 189, 472 |
| HpyCH4III | ACNGT | 3 cut(s) | 142, 241, 554 |
| HpyCH4V | TGCA | 2 cut(s) | 145, 152 |
| HpyF3I | CTNAG | 4 cut(s) | 96, 246, 386, 484 |
| Hsp92II | CATG | 3 cut(s) | 149, 164, 355 |
| Kzo9I | GATC | 2 cut(s) | 304, 434 |
| LmnI | GCTCC | 1 cut(s) | 67 |
| LweI | GCATC | 3 cut(s) | 139, 487, 520 |
| MaeI | CTAG | 1 cut(s) | 417 |
| MaeIII | GTNAC | 2 cut(s) | 57, 241 |
| MalI | GATC | 2 cut(s) | 306, 436 |
| MboI | GATC | 2 cut(s) | 304, 434 |
| MboII | GAAGA | 5 cut(s) | 113, 299, 314, 506, 539 |
| MflI | RGATCY | 1 cut(s) | 304 |
| MluCI | AATT | 1 cut(s) | 320 |
| MmeI | TCCRAC | 1 cut(s) | 168 |
| MnlI | CCTC | 1 cut(s) | 493 |
| MseI | TTAA | 1 cut(s) | 84 |
| MspR9I | CCNGG | 2 cut(s) | 63, 344 |
| Mva1269I | GAATGC | 1 cut(s) | 96 |
| MvaI | CCWGG | 2 cut(s) | 63, 344 |
| NcoI | CCATGG | 1 cut(s) | 160 |
| NdeII | GATC | 2 cut(s) | 304, 434 |
| NlaIII | CATG | 3 cut(s) | 149, 164, 355 |
| NlaIV | GGNNCC | 2 cut(s) | 69, 357 |
| PceI | AGGCCT | 1 cut(s) | 482 |
| PctI | GAATGC | 1 cut(s) | 96 |
| PfeI | GAWTC | 3 cut(s) | 100, 155, 260 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 113 |
| PshBI | ATTAAT | 1 cut(s) | 84 |
| Psp6I | CCWGG | 2 cut(s) | 61, 342 |
| PspGI | CCWGG | 2 cut(s) | 61, 342 |
| PspN4I | GGNNCC | 2 cut(s) | 69, 357 |
| PstNI | CAGNNNCTG | 2 cut(s) | 245, 491 |
| PsuI | RGATCY | 1 cut(s) | 304 |
| RsaI | GTAC | 4 cut(s) | 238, 272, 489, 522 |
| RsaNI | GTAC | 4 cut(s) | 237, 271, 488, 521 |
| SaqAI | TTAA | 1 cut(s) | 84 |
| Sau3AI | GATC | 2 cut(s) | 304, 434 |
| ScrFI | CCNGG | 2 cut(s) | 63, 344 |
| SetI | ASST | 5 cut(s) | 64, 406, 422, 493, 526 |
| SfaNI | GCATC | 3 cut(s) | 139, 487, 520 |
| Sse9I | AATT | 1 cut(s) | 320 |
| SseBI | AGGCCT | 1 cut(s) | 482 |
| SspMI | CTAG | 1 cut(s) | 417 |
| StuI | AGGCCT | 1 cut(s) | 482 |
| StyD4I | CCNGG | 2 cut(s) | 61, 342 |
| StyI | CCWWGG | 1 cut(s) | 160 |
| TaaI | ACNGT | 3 cut(s) | 142, 241, 554 |
| TaqI | TCGA | 3 cut(s) | 309, 433, 439 |
| TasI | AATT | 1 cut(s) | 320 |
| TfiI | GAWTC | 3 cut(s) | 100, 155, 260 |
| Tru1I | TTAA | 1 cut(s) | 84 |
| Tru9I | TTAA | 1 cut(s) | 84 |
| TscAI | CASTG | 3 cut(s) | 366, 510, 543 |
| TspDTI | ATGAA | 4 cut(s) | 300, 524, 546, 557 |
| TspRI | CASTG | 3 cut(s) | 366, 510, 543 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 113 |
| VspI | ATTAAT | 1 cut(s) | 84 |
| XspI | CTAG | 1 cut(s) | 417 |