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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G37750 AT5G02090 |
| malus_domestica | MD04G1135900.v1.1 MD12G1149400.v1.1 |
| prunus_persica | Prupe.6G261000_v2.0.a1 |
| pyrus_communis | pycom04g12280 |
| rosa_chinensis | RchiOBHm_Chr3g0465351 |
| rosa_laevigata | RLG00000024645 |
| rosa_multiflora | Rmu_sc0011781.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00415110 |
| rosa_rugosa | Rorug03G0076300 |
| rosa_samantha | Rh3BG141200 Rh3CG142200 Rh3DG142300 |
| rosa_wichuraiana | Rw3G011550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 24 |
| AciI | CCGC | 1 cut(s) | 62 |
| AclWI | GGATC | 2 cut(s) | 136, 149 |
| AcsI | RAATTY | 1 cut(s) | 187 |
| AcuI | CTGAAG | 1 cut(s) | 87 |
| AfaI | GTAC | 1 cut(s) | 44 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 151 |
| AgsI | TTSAA | 2 cut(s) | 76, 245 |
| AluBI | AGCT | 3 cut(s) | 107, 149, 163 |
| AluI | AGCT | 3 cut(s) | 107, 149, 163 |
| AlwI | GGATC | 2 cut(s) | 136, 149 |
| Ama87I | CYCGRG | 1 cut(s) | 133 |
| ApeKI | GCWGC | 1 cut(s) | 215 |
| ApoI | RAATTY | 1 cut(s) | 187 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 91, 123 |
| AsuC2I | CCSGG | 1 cut(s) | 126 |
| AvaI | CYCGRG | 1 cut(s) | 133 |
| BamHI | GGATCC | 1 cut(s) | 141 |
| BauI | CACGAG | 1 cut(s) | 79 |
| BbvI | GCAGC | 1 cut(s) | 202 |
| BcnI | CCSGG | 1 cut(s) | 126 |
| BfaI | CTAG | 1 cut(s) | 270 |
| BisI | GCNGC | 1 cut(s) | 216 |
| BlsI | GCNGC | 1 cut(s) | 217 |
| Bme1390I | CCNGG | 1 cut(s) | 126 |
| BmeT110I | CYCGRG | 1 cut(s) | 133 |
| BmiI | GGNNCC | 2 cut(s) | 70, 143 |
| BmrFI | CCNGG | 1 cut(s) | 126 |
| BmsI | GCATC | 1 cut(s) | 212 |
| BpmI | CTGGAG | 1 cut(s) | 258 |
| BpuMI | CCSGG | 1 cut(s) | 126 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 151 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 151 |
| BseXI | GCAGC | 1 cut(s) | 202 |
| BsiHKCI | CYCGRG | 1 cut(s) | 133 |
| BsiSI | CCGG | 1 cut(s) | 126 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 151 |
| BsoBI | CYCGRG | 1 cut(s) | 133 |
| Bsp143I | GATC | 2 cut(s) | 141, 222 |
| BspACI | CCGC | 1 cut(s) | 62 |
| BspHI | TCATGA | 1 cut(s) | 225 |
| BspLI | GGNNCC | 2 cut(s) | 70, 143 |
| BspPI | GGATC | 2 cut(s) | 136, 149 |
| BssMI | GATC | 2 cut(s) | 141, 222 |
| BssNAI | GTATAC | 1 cut(s) | 25 |
| BssSI | CACGAG | 1 cut(s) | 79 |
| Bst1107I | GTATAC | 1 cut(s) | 25 |
| Bst2BI | CACGAG | 1 cut(s) | 79 |
| BstKTI | GATC | 2 cut(s) | 144, 225 |
| BstMBI | GATC | 2 cut(s) | 141, 222 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 68 |
| BstSCI | CCNGG | 1 cut(s) | 124 |
| BstV1I | GCAGC | 1 cut(s) | 202 |
| BstX2I | RGATCY | 1 cut(s) | 141 |
| BstYI | RGATCY | 1 cut(s) | 141 |
| BstZ17I | GTATAC | 1 cut(s) | 25 |
| CciI | TCATGA | 1 cut(s) | 225 |
| Csp6I | GTAC | 1 cut(s) | 43 |
| CviAII | CATG | 1 cut(s) | 226 |
| CviJI | RGCY | 5 cut(s) | 32, 71, 107, 149, 163 |
| CviKI_1 | RGCY | 5 cut(s) | 32, 71, 107, 149, 163 |
| CviQI | GTAC | 1 cut(s) | 43 |
| DpnI | GATC | 2 cut(s) | 143, 224 |
| DpnII | GATC | 2 cut(s) | 141, 222 |
| Eco57I | CTGAAG | 1 cut(s) | 87 |
| Eco88I | CYCGRG | 1 cut(s) | 133 |
| EcoRI | GAATTC | 1 cut(s) | 187 |
| FaeI | CATG | 1 cut(s) | 229 |
| FaiI | YATR | 7 cut(s) | 25, 35, 114, 170, 180, 185, 227 |
| FatI | CATG | 1 cut(s) | 225 |
| FauI | CCCGC | 1 cut(s) | 55 |
| FblI | GTMKAC | 1 cut(s) | 24 |
| Fnu4HI | GCNGC | 1 cut(s) | 216 |
| Fsp4HI | GCNGC | 1 cut(s) | 216 |
| FspBI | CTAG | 1 cut(s) | 270 |
| GluI | GCNGC | 1 cut(s) | 216 |
| GsuI | CTGGAG | 1 cut(s) | 258 |
| HapII | CCGG | 1 cut(s) | 126 |
| Hin1II | CATG | 1 cut(s) | 229 |
| HindIII | AAGCTT | 1 cut(s) | 147 |
| HinfI | GANTC | 3 cut(s) | 13, 92, 131 |
| HpaII | CCGG | 1 cut(s) | 126 |
| Hpy166II | GTNNAC | 2 cut(s) | 25, 122 |
| Hpy188I | TCNGA | 2 cut(s) | 154, 175 |
| Hpy188III | TCNNGA | 2 cut(s) | 226, 237 |
| Hpy8I | GTNNAC | 2 cut(s) | 25, 122 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 68 |
| Hsp92II | CATG | 1 cut(s) | 229 |
| Kzo9I | GATC | 2 cut(s) | 141, 222 |
| LmnI | GCTCC | 1 cut(s) | 68 |
| LpnPI | CCDG | 4 cut(s) | 139, 177, 222, 233 |
| Lsp1109I | GCAGC | 1 cut(s) | 202 |
| LweI | GCATC | 1 cut(s) | 212 |
| MaeI | CTAG | 1 cut(s) | 270 |
| MalI | GATC | 2 cut(s) | 143, 224 |
| MboI | GATC | 2 cut(s) | 141, 222 |
| MboII | GAAGA | 3 cut(s) | 189, 198, 201 |
| MflI | RGATCY | 1 cut(s) | 141 |
| MluCI | AATT | 3 cut(s) | 187, 252, 274 |
| MlyI | GAGTC | 2 cut(s) | 101, 125 |
| MmeI | TCCRAC | 1 cut(s) | 153 |
| MnlI | CCTC | 1 cut(s) | 132 |
| MseI | TTAA | 1 cut(s) | 277 |
| MspA1I | CMGCKG | 1 cut(s) | 163 |
| MspI | CCGG | 1 cut(s) | 126 |
| MspR9I | CCNGG | 1 cut(s) | 126 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 68 |
| NciI | CCSGG | 1 cut(s) | 126 |
| NdeII | GATC | 2 cut(s) | 141, 222 |
| NlaIII | CATG | 1 cut(s) | 229 |
| NlaIV | GGNNCC | 2 cut(s) | 70, 143 |
| PagI | TCATGA | 1 cut(s) | 225 |
| PfeI | GAWTC | 1 cut(s) | 13 |
| PkrI | GCNGC | 1 cut(s) | 217 |
| PleI | GAGTC | 2 cut(s) | 100, 125 |
| PpsI | GAGTC | 2 cut(s) | 100, 125 |
| PspN4I | GGNNCC | 2 cut(s) | 70, 143 |
| PsuI | RGATCY | 1 cut(s) | 141 |
| PvuII | CAGCTG | 1 cut(s) | 163 |
| RsaI | GTAC | 1 cut(s) | 44 |
| RsaNI | GTAC | 1 cut(s) | 43 |
| SaqAI | TTAA | 1 cut(s) | 277 |
| SatI | GCNGC | 1 cut(s) | 216 |
| Sau3AI | GATC | 2 cut(s) | 141, 222 |
| SchI | GAGTC | 2 cut(s) | 101, 125 |
| ScrFI | CCNGG | 1 cut(s) | 126 |
| SetI | ASST | 3 cut(s) | 109, 151, 165 |
| SfaNI | GCATC | 1 cut(s) | 212 |
| Sse9I | AATT | 3 cut(s) | 187, 252, 274 |
| SsiI | CCGC | 1 cut(s) | 62 |
| SspMI | CTAG | 1 cut(s) | 270 |
| StyD4I | CCNGG | 1 cut(s) | 124 |
| TasI | AATT | 3 cut(s) | 187, 252, 274 |
| TatI | WGTACW | 1 cut(s) | 42 |
| TfiI | GAWTC | 1 cut(s) | 13 |
| Tru1I | TTAA | 1 cut(s) | 277 |
| Tru9I | TTAA | 1 cut(s) | 277 |
| TseI | GCWGC | 1 cut(s) | 215 |
| TspDTI | ATGAA | 2 cut(s) | 200, 242 |
| TspGWI | ACGGA | 1 cut(s) | 107 |
| XapI | RAATTY | 1 cut(s) | 187 |
| XmiI | GTMKAC | 1 cut(s) | 24 |
| XspI | CTAG | 1 cut(s) | 270 |