NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08610 |
| fragaria_vesca | FvH4_6g09420 |
| malus_domestica | MD04G1177900.v1.1 MD12G1193500.v1.1 |
| prunus_persica | Prupe.6G297800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0459881 |
| rosa_multiflora | Rmu_co8074100.1_g000001 Rmu_sc0000240.1_g000043 |
| rosa_roxburghii | Rroxscaffold_6G00419940 |
| rosa_rugosa | Rorug03G0038100 Rorug03G0038200.1 Rorug03G0038300.1 Rorug03G0038400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 98 |
| AciI | CCGC | 1 cut(s) | 96 |
| AclWI | GGATC | 1 cut(s) | 47 |
| AcoI | YGGCCR | 2 cut(s) | 103, 107 |
| AflIII | ACRYGT | 1 cut(s) | 129 |
| AluBI | AGCT | 2 cut(s) | 23, 166 |
| AluI | AGCT | 2 cut(s) | 23, 166 |
| AlwI | GGATC | 1 cut(s) | 47 |
| AoxI | GGCC | 2 cut(s) | 103, 107 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 24 |
| BccI | CCATC | 1 cut(s) | 10 |
| BisI | GCNGC | 1 cut(s) | 96 |
| BlsI | GCNGC | 1 cut(s) | 97 |
| BsaJI | CCNNGG | 1 cut(s) | 144 |
| Bse118I | RCCGGY | 1 cut(s) | 105 |
| BseDI | CCNNGG | 1 cut(s) | 144 |
| BseGI | GGATG | 1 cut(s) | 21 |
| BseMII | CTCAG | 1 cut(s) | 89 |
| BseX3I | CGGCCG | 1 cut(s) | 107 |
| Bsh1285I | CGRYCG | 1 cut(s) | 110 |
| BshFI | GGCC | 2 cut(s) | 105, 109 |
| BsiEI | CGRYCG | 1 cut(s) | 110 |
| BsiSI | CCGG | 1 cut(s) | 106 |
| BslFI | GGGAC | 2 cut(s) | 149, 170 |
| BsmFI | GGGAC | 2 cut(s) | 149, 170 |
| BsmI | GAATGC | 1 cut(s) | 57 |
| BsnI | GGCC | 2 cut(s) | 105, 109 |
| Bsp143I | GATC | 1 cut(s) | 39 |
| Bsp19I | CCATGG | 1 cut(s) | 144 |
| BspACI | CCGC | 1 cut(s) | 96 |
| BspANI | GGCC | 2 cut(s) | 105, 109 |
| BspCNI | CTCAG | 1 cut(s) | 88 |
| BspPI | GGATC | 1 cut(s) | 47 |
| BsrBI | CCGCTC | 1 cut(s) | 98 |
| BsrFI | RCCGGY | 1 cut(s) | 105 |
| BssAI | RCCGGY | 1 cut(s) | 105 |
| BssECI | CCNNGG | 1 cut(s) | 144 |
| BssMI | GATC | 1 cut(s) | 39 |
| BssT1I | CCWWGG | 1 cut(s) | 144 |
| BstC8I | GCNNGC | 2 cut(s) | 107, 177 |
| BstDEI | CTNAG | 1 cut(s) | 75 |
| BstDSI | CCRYGG | 1 cut(s) | 144 |
| BstF5I | GGATG | 1 cut(s) | 21 |
| BstKTI | GATC | 1 cut(s) | 42 |
| BstMBI | GATC | 1 cut(s) | 39 |
| BstMCI | CGRYCG | 1 cut(s) | 110 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 172 |
| BstNSI | RCATGY | 1 cut(s) | 133 |
| BstZI | CGGCCG | 1 cut(s) | 107 |
| BsuRI | GGCC | 2 cut(s) | 105, 109 |
| BtgI | CCRYGG | 1 cut(s) | 144 |
| BtsCI | GGATG | 1 cut(s) | 21 |
| Cac8I | GCNNGC | 2 cut(s) | 107, 177 |
| Cfr10I | RCCGGY | 1 cut(s) | 105 |
| CseI | GACGC | 1 cut(s) | 49 |
| CviAII | CATG | 4 cut(s) | 64, 101, 130, 145 |
| CviJI | RGCY | 6 cut(s) | 23, 95, 105, 109, 143, 166 |
| CviKI_1 | RGCY | 6 cut(s) | 23, 95, 105, 109, 143, 166 |
| DdeI | CTNAG | 1 cut(s) | 75 |
| DpnI | GATC | 1 cut(s) | 41 |
| DpnII | GATC | 1 cut(s) | 39 |
| EaeI | YGGCCR | 2 cut(s) | 103, 107 |
| EagI | CGGCCG | 1 cut(s) | 107 |
| EclXI | CGGCCG | 1 cut(s) | 107 |
| Eco130I | CCWWGG | 1 cut(s) | 144 |
| Eco52I | CGGCCG | 1 cut(s) | 107 |
| EcoT14I | CCWWGG | 1 cut(s) | 144 |
| ErhI | CCWWGG | 1 cut(s) | 144 |
| FaeI | CATG | 4 cut(s) | 67, 104, 133, 148 |
| FaiI | YATR | 6 cut(s) | 44, 65, 84, 102, 131, 146 |
| FaqI | GGGAC | 2 cut(s) | 149, 170 |
| FatI | CATG | 4 cut(s) | 63, 100, 129, 144 |
| Fnu4HI | GCNGC | 1 cut(s) | 96 |
| FokI | GGATG | 1 cut(s) | 28 |
| FseI | GGCCGGCC | 1 cut(s) | 109 |
| Fsp4HI | GCNGC | 1 cut(s) | 96 |
| GluI | GCNGC | 1 cut(s) | 96 |
| HaeIII | GGCC | 2 cut(s) | 105, 109 |
| HapII | CCGG | 1 cut(s) | 106 |
| HgaI | GACGC | 1 cut(s) | 49 |
| Hin1II | CATG | 4 cut(s) | 67, 104, 133, 148 |
| HpaII | CCGG | 1 cut(s) | 106 |
| Hpy188I | TCNGA | 1 cut(s) | 122 |
| HpyAV | CCTTC | 2 cut(s) | 147, 198 |
| HpyCH4IV | ACGT | 1 cut(s) | 138 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 172 |
| HpyF3I | CTNAG | 1 cut(s) | 75 |
| HpySE526I | ACGT | 1 cut(s) | 138 |
| Hsp92II | CATG | 4 cut(s) | 67, 104, 133, 148 |
| KroI | GCCGGC | 1 cut(s) | 105 |
| KroNI | GCCGGC | 1 cut(s) | 107 |
| Kzo9I | GATC | 1 cut(s) | 39 |
| LmnI | GCTCC | 1 cut(s) | 190 |
| LpnPI | CCDG | 3 cut(s) | 33, 119, 161 |
| MaeII | ACGT | 1 cut(s) | 138 |
| MalI | GATC | 1 cut(s) | 41 |
| MbiI | CCGCTC | 1 cut(s) | 98 |
| MboI | GATC | 1 cut(s) | 39 |
| MboII | GAAGA | 1 cut(s) | 183 |
| MluCI | AATT | 1 cut(s) | 196 |
| MnlI | CCTC | 1 cut(s) | 42 |
| MroNI | GCCGGC | 1 cut(s) | 105 |
| MroXI | GAANNNNTTC | 1 cut(s) | 24 |
| MspI | CCGG | 1 cut(s) | 106 |
| Mva1269I | GAATGC | 1 cut(s) | 57 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 172 |
| NaeI | GCCGGC | 1 cut(s) | 107 |
| NcoI | CCATGG | 1 cut(s) | 144 |
| NdeII | GATC | 1 cut(s) | 39 |
| NgoMIV | GCCGGC | 1 cut(s) | 105 |
| NlaIII | CATG | 4 cut(s) | 67, 104, 133, 148 |
| NspI | RCATGY | 1 cut(s) | 133 |
| PciI | ACATGT | 1 cut(s) | 129 |
| PctI | GAATGC | 1 cut(s) | 57 |
| PdiI | GCCGGC | 1 cut(s) | 107 |
| PdmI | GAANNNNTTC | 1 cut(s) | 24 |
| PkrI | GCNGC | 1 cut(s) | 97 |
| PscI | ACATGT | 1 cut(s) | 129 |
| RigI | GGCCGGCC | 1 cut(s) | 109 |
| SatI | GCNGC | 1 cut(s) | 96 |
| Sau3AI | GATC | 1 cut(s) | 39 |
| SetI | ASST | 3 cut(s) | 25, 141, 168 |
| Sse9I | AATT | 1 cut(s) | 196 |
| SsiI | CCGC | 1 cut(s) | 96 |
| StyI | CCWWGG | 1 cut(s) | 144 |
| TaiI | ACGT | 1 cut(s) | 141 |
| TasI | AATT | 1 cut(s) | 196 |
| TauI | GCSGC | 1 cut(s) | 98 |
| XceI | RCATGY | 1 cut(s) | 133 |
| XmnI | GAANNNNTTC | 1 cut(s) | 24 |