Prupe.6G303300_v2.0.a1
MYB Family

Transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
27479715 .. 27481958
2244 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G303300.1

Sequence Viewer

Length: 1389 bp
ATGGGGAGGCACTCTTGTTGCTACAAGCAGAAGCTAAGGAAAGGCCTCTGGTCTCCTGAGGAGGATGATAAGCTTCTCAATTACATCACCAAGCATGGTCATGGCTGCTGGAGCTCAGTGCCTAAGCTAGCAGGTCTACAAAGGTGTGGGAAGAGTTGCAGGTTAAGGTGGATAAATTACCTGAGGCCTGATTTGAAGAGAGGCCCATTCTCACAGCAAGAAGAGAATTTGATAATAGAACTTCATGCAGTTCTTGGAAACAGATGGTCTCAGATTGCTGCTCAGTTACCTGGAAGGACAGATAATGAGATAAAGAATTTATGGAATTCCTGCATTAAGAAGAAGCTGAGACAAAGAGGCATTGACCCCAACACTCACAAACCACTCTCAGAGGTACTTGATCAAGATGACAAAGAGATTAGCAAGCTCTCCCCAACCTACAAAAGCAATGAGAAAGCCTCTGTGGGATCAAATGAACTCAATCTTGCTGAGGCAGTGAATTCAAAGCCACCTGCAGTCTCCGAAAACCGGTACCCGGTTGAGGTTTCTTCCAGCTCCAAGGTCCTCAACAACAACAGTAACAATGGCAGCAGCAGCAGCAGCAAGAATTTGACTGCTGTTAATCCACCCACCCAAGAGTTCTTCCTGGACAGAGCTTGTACCACCTCACATGAAGGCTCCACCAGCAGTTGCAGGCCCTATGATTTGGTGGGGTATTTCTCTTTTCATCAAAACCAATCCAATTATGGATCAGATATGGGGCTAGCAGTAAATCCAAATACCACTTTCAGCTTCCTCAATCAAAATCCAAGGTCTTCTGAGATGCTACCGGTAGACTTCAGTTCTAGCATGACACCAAGTCTTCTTCCAACCATGTCATCAAGCTCATCAATCTTCACAACTCCCCCCACACGTGTGAAGCCTTCCATCAGCCTCCCCTCTGATAATTCATCCACTTGGGATTCGAACACCTTCAGCAACAATGGCAACAGAAGCAGCAGCAGCAACATGGAACTGCAAAGCAACAACAACAACAACAACAGCAACAGCTTCTTTGACAGCAGCGCTGCAGCTTTTTCTTGGGGCCTGCCAGAGCCTGTAAAATCTGACGATGCAGAAGAGATAAAATGGTCTGAATATCTCCACAGTCCATTTCTGATGGGAACAACAACAACCGCTATACAAAACCATCATCAAGCCTTTCAACATAATAATACATACACTCATGATCAGGTCAAACCAGAAACATCACAGTTTTTGTCAAACAGTTCAAGTGCAACAACAACAACTTCAACTTGGCACCATCAGAACCAACAAGCTTTTCAAGCTTCAGAGATGTGTACAAAGGATCTTCAGAGACTTGCTGTAGCTTTTGGACAGACCCTTTAG

Protein Analysis

463

Amino Acids

51.43

Weight (kDa)

7.63

Isoelectric Point (pI)

55.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015647)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 520
Acc36I ACCTGC 3 cut(s) 122, 150, 520
Acc65I GGTACC 1 cut(s) 531
AccB1I GGYRCC 2 cut(s) 531, 1299
AccI GTMKAC 2 cut(s) 136, 834
AciI CCGC 1 cut(s) 1176
AclWI GGATC 3 cut(s) 475, 757, 1356
AcsI RAATTY 5 cut(s) 226, 316, 325, 499, 607
AcuI CTGAAG 4 cut(s) 823, 958, 1314, 1337
AcvI CACGTG 1 cut(s) 914
AfaI GTAC 4 cut(s) 396, 533, 661, 1342
AfeI AGCGCT 1 cut(s) 1066
AfiI CCNNNNNNNGG 3 cut(s) 528, 535, 541
AflIII ACRYGT 2 cut(s) 911, 913
AgeI ACCGGT 2 cut(s) 528, 829
AgsI TTSAA 6 cut(s) 196, 504, 1205, 1272, 1293, 1325
AhdI GACNNNNNGTC 1 cut(s) 858
AjnI CCWGG 2 cut(s) 289, 645
AjuI GAANNNNNNNTTGG 2 cut(s) 1305, 1337
AleI CACNNNNGTG 1 cut(s) 914
Alw21I GWGCWC 1 cut(s) 116
Alw26I GTCTC 5 cut(s) 57, 273, 343, 523, 1351
AlwI GGATC 3 cut(s) 475, 757, 1356
AlwNI CAGNNNCTG 1 cut(s) 1097
Aor51HI AGCGCT 1 cut(s) 1066
AoxI GGCC 5 cut(s) 43, 185, 202, 695, 1084
ApoI RAATTY 5 cut(s) 226, 316, 325, 499, 607
AsiGI ACCGGT 2 cut(s) 528, 829
Asp700I GAANNNNTTC 1 cut(s) 971
Asp718I GGTACC 1 cut(s) 531
AspLEI GCGC 1 cut(s) 1067
AspS9I GGNCC 4 cut(s) 203, 562, 696, 1084
AsuC2I CCSGG 1 cut(s) 536
AsuHPI GGTGA 1 cut(s) 79
AsuII TTCGAA 1 cut(s) 965
AsuNHI GCTAGC 2 cut(s) 127, 763
AvaII GGWCC 1 cut(s) 562
AxyI CCTNAGG 2 cut(s) 57, 182
BanI GGYRCC 2 cut(s) 531, 1299
BanII GRGCYC 1 cut(s) 116
BbrPI CACGTG 1 cut(s) 914
BbsI GAAGAC 2 cut(s) 807, 854
Bbv12I GWGCWC 1 cut(s) 116
BbvCI CCTCAGC 1 cut(s) 489
BccI CCATC 5 cut(s) 258, 935, 1153, 1197, 1311
BciT130I CCWGG 2 cut(s) 291, 647
BclI TGATCA 2 cut(s) 400, 1228
BcnI CCSGG 1 cut(s) 536
BcoDI GTCTC 5 cut(s) 57, 273, 343, 523, 1351
BfaI CTAG 3 cut(s) 128, 764, 846
BfmI CTRYAG 3 cut(s) 513, 1068, 1365
BfoI RGCGCY 1 cut(s) 1068
BfuAI ACCTGC 3 cut(s) 122, 150, 520
Bme1390I CCNGG 3 cut(s) 291, 536, 647
Bme18I GGWCC 1 cut(s) 562
BmeRI GACNNNNNGTC 1 cut(s) 858
BmgT120I GGNCC 4 cut(s) 203, 562, 696, 1084
BmiI GGNNCC 4 cut(s) 533, 679, 1085, 1301
BmrFI CCNGG 3 cut(s) 291, 536, 647
BmsI GCATC 2 cut(s) 813, 1102
BmtI GCTAGC 2 cut(s) 131, 767
BpiI GAAGAC 2 cut(s) 807, 854
BplI GAGNNNNNCTC 2 cut(s) 443, 475
BpmI CTGGAG 1 cut(s) 130
Bpu10I CCTNAGC 3 cut(s) 35, 123, 489
Bpu14I TTCGAA 1 cut(s) 965
BpuMI CCSGG 1 cut(s) 536
BsaAI YACGTR 1 cut(s) 914
BsaI GGTCTC 2 cut(s) 57, 273
BsaJI CCNNGG 2 cut(s) 558, 809
BsaWI WCCGGW 2 cut(s) 528, 829
Bsc4I CCNNNNNNNGG 3 cut(s) 528, 535, 541
Bse118I RCCGGY 2 cut(s) 528, 829
Bse21I CCTNAGG 2 cut(s) 57, 182
Bse3DI GCAATG 1 cut(s) 454
BseBI CCWGG 2 cut(s) 291, 647
BseDI CCNNGG 2 cut(s) 558, 809
BseGI GGATG 2 cut(s) 70, 950
BseLI CCNNNNNNNGG 3 cut(s) 528, 535, 541
BseMI GCAATG 1 cut(s) 454
BseMII CTCAG 9 cut(s) 48, 129, 173, 284, 296, 338, 402, 480, 810
BseRI GAGGAG 1 cut(s) 74
BshFI GGCC 5 cut(s) 45, 187, 204, 697, 1086
BshNI GGYRCC 2 cut(s) 531, 1299
BshTI ACCGGT 2 cut(s) 528, 829
BsiHKAI GWGCWC 1 cut(s) 116
BsiSI CCGG 3 cut(s) 529, 536, 830
BslI CCNNNNNNNGG 3 cut(s) 528, 535, 541
BsmAI GTCTC 5 cut(s) 57, 273, 343, 523, 1351
BsnI GGCC 5 cut(s) 45, 187, 204, 697, 1086
Bso31I GGTCTC 2 cut(s) 57, 273
Bsp119I TTCGAA 1 cut(s) 965
Bsp1286I GDGCHC 1 cut(s) 116
Bsp1407I TGTACA 1 cut(s) 1340
Bsp143I GATC 5 cut(s) 400, 467, 749, 1228, 1348
BspACI CCGC 1 cut(s) 1176
BspANI GGCC 5 cut(s) 45, 187, 204, 697, 1086
BspCNI CTCAG 9 cut(s) 49, 128, 174, 283, 295, 339, 401, 481, 811
BspHI TCATGA 1 cut(s) 1225
BspLI GGNNCC 4 cut(s) 533, 679, 1085, 1301
BspMAI CTGCAG 2 cut(s) 517, 1072
BspMI ACCTGC 3 cut(s) 122, 150, 520
BspOI GCTAGC 2 cut(s) 131, 767
BspPI GGATC 3 cut(s) 475, 757, 1356
BspT104I TTCGAA 1 cut(s) 965
BspT107I GGYRCC 2 cut(s) 531, 1299
BspTNI GGTCTC 2 cut(s) 57, 273
BsrDI GCAATG 1 cut(s) 454
BsrFI RCCGGY 2 cut(s) 528, 829
BsrGI TGTACA 1 cut(s) 1340
BssAI RCCGGY 2 cut(s) 528, 829
BssECI CCNNGG 2 cut(s) 558, 809
BssMI GATC 5 cut(s) 400, 467, 749, 1228, 1348
BssT1I CCWWGG 2 cut(s) 558, 809
Bst2UI CCWGG 2 cut(s) 291, 647
Bst4CI ACNGT 4 cut(s) 578, 1148, 1254, 1268
Bst6I CTCTTC 4 cut(s) 146, 191, 216, 1113
BstAUI TGTACA 1 cut(s) 1340
BstBAI YACGTR 1 cut(s) 914
BstBI TTCGAA 1 cut(s) 965
BstC8I GCNNGC 5 cut(s) 129, 425, 695, 765, 1088
BstF5I GGATG 2 cut(s) 70, 950
BstH2I RGCGCY 1 cut(s) 1068
BstHHI GCGC 1 cut(s) 1067
BstKTI GATC 5 cut(s) 403, 470, 752, 1231, 1351
BstMAI GTCTC 5 cut(s) 57, 273, 343, 523, 1351
BstMBI GATC 5 cut(s) 400, 467, 749, 1228, 1348
BstMWI GCNNNNNNNGC 9 cut(s) 111, 594, 597, 600, 684, 984, 993, 1002, 1325
BstNI CCWGG 2 cut(s) 291, 647
BstSCI CCNGG 3 cut(s) 289, 534, 645
BstSFI CTRYAG 3 cut(s) 513, 1068, 1365
BstV2I GAAGAC 2 cut(s) 807, 854
BstX2I RGATCY 1 cut(s) 1348
BstYI RGATCY 1 cut(s) 1348
Bsu36I CCTNAGG 2 cut(s) 57, 182
BsuRI GGCC 5 cut(s) 45, 187, 204, 697, 1086
BtsCI GGATG 2 cut(s) 70, 950
BtsI GCAGTG 1 cut(s) 501
BtsIMutI CAGTG 2 cut(s) 123, 501
BveI ACCTGC 3 cut(s) 122, 150, 520
Cac8I GCNNGC 5 cut(s) 129, 425, 695, 765, 1088
CaiI CAGNNNCTG 1 cut(s) 1097
CciI TCATGA 1 cut(s) 1225
CfoI GCGC 1 cut(s) 1067
Cfr10I RCCGGY 2 cut(s) 528, 829
Cfr13I GGNCC 4 cut(s) 203, 562, 696, 1084
Csp6I GTAC 4 cut(s) 395, 532, 660, 1341
CspAI ACCGGT 2 cut(s) 528, 829
CviAII CATG 8 cut(s) 95, 101, 245, 671, 850, 874, 1009, 1226
CviQI GTAC 4 cut(s) 395, 532, 660, 1341
DpnI GATC 5 cut(s) 402, 469, 751, 1230, 1350
DpnII GATC 5 cut(s) 400, 467, 749, 1228, 1348
DriI GACNNNNNGTC 1 cut(s) 858
Eam1104I CTCTTC 4 cut(s) 146, 191, 216, 1113
Eam1105I GACNNNNNGTC 1 cut(s) 858
EarI CTCTTC 4 cut(s) 146, 191, 216, 1113
Ecl136II GAGCTC 1 cut(s) 114
Eco130I CCWWGG 2 cut(s) 558, 809
Eco147I AGGCCT 2 cut(s) 45, 187
Eco24I GRGCYC 1 cut(s) 116
Eco31I GGTCTC 2 cut(s) 57, 273
Eco47I GGWCC 1 cut(s) 562
Eco47III AGCGCT 1 cut(s) 1066
Eco53kI GAGCTC 1 cut(s) 114
Eco57I CTGAAG 4 cut(s) 823, 958, 1314, 1337
Eco72I CACGTG 1 cut(s) 914
Eco81I CCTNAGG 2 cut(s) 57, 182
EcoICRI GAGCTC 1 cut(s) 114
EcoO109I RGGNCCY 3 cut(s) 562, 696, 1084
EcoRI GAATTC 2 cut(s) 325, 499
EcoRII CCWGG 2 cut(s) 289, 645
EcoT14I CCWWGG 2 cut(s) 558, 809
EcoT38I GRGCYC 1 cut(s) 116
ErhI CCWWGG 2 cut(s) 558, 809
FaeI CATG 8 cut(s) 98, 104, 248, 674, 853, 877, 1012, 1229
FatI CATG 8 cut(s) 94, 100, 244, 670, 849, 873, 1008, 1225
FbaI TGATCA 2 cut(s) 400, 1228
FblI GTMKAC 2 cut(s) 136, 834
FokI GGATG 2 cut(s) 77, 937
FriOI GRGCYC 1 cut(s) 116
FspBI CTAG 3 cut(s) 128, 764, 846
GlaI GCGC 1 cut(s) 1066
GsuI CTGGAG 1 cut(s) 130
HaeII RGCGCY 1 cut(s) 1068
HaeIII GGCC 5 cut(s) 45, 187, 204, 697, 1086
HapII CCGG 3 cut(s) 529, 536, 830
HhaI GCGC 1 cut(s) 1067
Hin1II CATG 8 cut(s) 98, 104, 248, 674, 853, 877, 1012, 1229
Hin6I GCGC 1 cut(s) 1065
HinP1I GCGC 1 cut(s) 1065
HindIII AAGCTT 3 cut(s) 71, 1317, 1326
HinfI GANTC 1 cut(s) 962
HpaII CCGG 3 cut(s) 529, 536, 830
HphI GGTGA 1 cut(s) 79
Hpy166II GTNNAC 3 cut(s) 137, 835, 1341
Hpy188III TCNNGA 3 cut(s) 56, 404, 1226
Hpy8I GTNNAC 3 cut(s) 137, 835, 1341
HpyAV CCTTC 4 cut(s) 288, 668, 933, 982
HpyCH4III ACNGT 4 cut(s) 578, 1148, 1254, 1268
HpyCH4IV ACGT 1 cut(s) 913
HpyCH4V TGCA 9 cut(s) 159, 248, 333, 515, 693, 1018, 1070, 1115, 1277
HpyF10VI GCNNNNNNNGC 9 cut(s) 111, 594, 597, 600, 684, 984, 993, 1002, 1325
HpySE526I ACGT 1 cut(s) 913
Hsp92II CATG 8 cut(s) 98, 104, 248, 674, 853, 877, 1012, 1229
HspAI GCGC 1 cut(s) 1065
KpnI GGTACC 1 cut(s) 535
Ksp22I TGATCA 2 cut(s) 400, 1228
Kzo9I GATC 5 cut(s) 400, 467, 749, 1228, 1348
LmnI GCTCC 3 cut(s) 111, 560, 683
LweI GCATC 2 cut(s) 813, 1102
MaeI CTAG 3 cut(s) 128, 764, 846
MaeII ACGT 1 cut(s) 913
MaeIII GTNAC 2 cut(s) 285, 578
MalI GATC 5 cut(s) 402, 469, 751, 1230, 1350
MboI GATC 5 cut(s) 400, 467, 749, 1228, 1348
MflI RGATCY 1 cut(s) 1348
MhlI GDGCHC 1 cut(s) 116
MluCI AATT 9 cut(s) 79, 175, 226, 316, 325, 499, 607, 742, 946
MmeI TCCRAC 1 cut(s) 893
MroXI GAANNNNTTC 1 cut(s) 971
MseI TTAA 3 cut(s) 164, 336, 621
MslI CAYNNNNRTG 2 cut(s) 99, 914
MspI CCGG 3 cut(s) 529, 536, 830
MspR9I CCNGG 3 cut(s) 291, 536, 647
MvaI CCWGG 2 cut(s) 291, 647
MwoI GCNNNNNNNGC 9 cut(s) 111, 594, 597, 600, 684, 984, 993, 1002, 1325
NciI CCSGG 1 cut(s) 536
NdeII GATC 5 cut(s) 400, 467, 749, 1228, 1348
NheI GCTAGC 2 cut(s) 127, 763
NlaIII CATG 8 cut(s) 98, 104, 248, 674, 853, 877, 1012, 1229
NlaIV GGNNCC 4 cut(s) 533, 679, 1085, 1301
NspV TTCGAA 1 cut(s) 965
OliI CACNNNNGTG 1 cut(s) 914
PagI TCATGA 1 cut(s) 1225
PaqCI CACCTGC 1 cut(s) 520
PceI AGGCCT 2 cut(s) 45, 187
PdmI GAANNNNTTC 1 cut(s) 971
PfeI GAWTC 1 cut(s) 962
PfoI TCCNGGA 1 cut(s) 645
PinAI ACCGGT 2 cut(s) 528, 829
PmaCI CACGTG 1 cut(s) 914
PmlI CACGTG 1 cut(s) 914
Ppu21I YACGTR 1 cut(s) 914
PpuMI RGGWCCY 1 cut(s) 562
Psp124BI GAGCTC 1 cut(s) 116
Psp5II RGGWCCY 1 cut(s) 562
Psp6I CCWGG 2 cut(s) 289, 645
PspCI CACGTG 1 cut(s) 914
PspGI CCWGG 2 cut(s) 289, 645
PspN4I GGNNCC 4 cut(s) 533, 679, 1085, 1301
PspPI GGNCC 4 cut(s) 203, 562, 696, 1084
PspPPI RGGWCCY 1 cut(s) 562
PstI CTGCAG 2 cut(s) 517, 1072
PstNI CAGNNNCTG 1 cut(s) 1097
PsuI RGATCY 1 cut(s) 1348
RsaI GTAC 4 cut(s) 396, 533, 661, 1342
RsaNI GTAC 4 cut(s) 395, 532, 660, 1341
RseI CAYNNNNRTG 2 cut(s) 99, 914
SacI GAGCTC 1 cut(s) 116
SaqAI TTAA 3 cut(s) 164, 336, 621
Sau3AI GATC 5 cut(s) 400, 467, 749, 1228, 1348
Sau96I GGNCC 4 cut(s) 203, 562, 696, 1084
ScrFI CCNGG 3 cut(s) 291, 536, 647
SduI GDGCHC 1 cut(s) 116
SfaNI GCATC 2 cut(s) 813, 1102
SfcI CTRYAG 3 cut(s) 513, 1068, 1365
SfuI TTCGAA 1 cut(s) 965
SinI GGWCC 1 cut(s) 562
SmiMI CAYNNNNRTG 2 cut(s) 99, 914
Sse9I AATT 9 cut(s) 79, 175, 226, 316, 325, 499, 607, 742, 946
SseBI AGGCCT 2 cut(s) 45, 187
SsiI CCGC 1 cut(s) 1176
SspMI CTAG 3 cut(s) 128, 764, 846
SstI GAGCTC 1 cut(s) 116
StuI AGGCCT 2 cut(s) 45, 187
StyD4I CCNGG 3 cut(s) 289, 534, 645
StyI CCWWGG 2 cut(s) 558, 809
TaaI ACNGT 4 cut(s) 578, 1148, 1254, 1268
TaiI ACGT 1 cut(s) 916
TaqI TCGA 1 cut(s) 965
TasI AATT 9 cut(s) 79, 175, 226, 316, 325, 499, 607, 742, 946
TatI WGTACW 1 cut(s) 1340
TfiI GAWTC 1 cut(s) 962
Tru1I TTAA 3 cut(s) 164, 336, 621
Tru9I TTAA 3 cut(s) 164, 336, 621
TscAI CASTG 2 cut(s) 123, 501
TspDTI ATGAA 5 cut(s) 233, 489, 687, 716, 939
TspRI CASTG 2 cut(s) 123, 501
VpaK11BI GGWCC 1 cut(s) 562
XapI RAATTY 5 cut(s) 226, 316, 325, 499, 607
XcmI CCANNNNNNNNNTGG 1 cut(s) 743
XmiI GTMKAC 2 cut(s) 136, 834
XmnI GAANNNNTTC 1 cut(s) 971
XspI CTAG 3 cut(s) 128, 764, 846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.