Prupe.6G305800_v2.0.a1

Domain of unknown function

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
27597618 .. 27601502
3885 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G305800.1

Sequence Viewer

Length: 1800 bp
ATGGACTTCAACGCAGGAGGTAAAGTCGCCGATCAACGACAACAGTGTGAAGCGATTTACAGAAGAAGAAAGCCCGACAAACCCACTCAAGATGTAGAACCCTCAAAGCAGTCATGTTCGGCTCGTTATGTGGGAAGGGTGAGTTTGGCTCCTGCTGCTGGAGCTCTCAACAGGAAAACCAGTTGGACCCGTTCCCTTTCTACAAGAGGGAGGACAAGTGTTGCTGTTGGTGTTTGCTTTGAGTATCATCCTCAACATAAGGAGCCTAAAAGAAAAGGAAAGAGAAAAGGAAAAGCTGCTCTTCCCAAAGGGAAGTACAAATTTGAAGAGGAGAAGGCTTACTTTCAAGAGGTTGATGCCTTTGAGTTGTTGGAGGAGAGCCCCTCTCCCAAACCTACTACATGGGTTGCGGGCAACCAAACTGGTACTGTTGCATTACCCAAGTTGTGCTCTCCATTAGATAAATGGTTGTTCAAGAAGCTAAACTTCACTTTCGAGCCTTCCAGCACATTGTCTAAGATACTGCAGACTTCAACCATGCGGCCCATACCTTCAGAACCCATTGGTGGTAACAATTTGAAATCTTCAAGTTTGAAAAATTCTAGTAAAGTCAATTCTCGTTTGCCTTCTGTGCAAAGCAGATTTGAATTGAGTTTGGTTGATGGAAGTGTGCTTGAAACGGTGCCGGATGTGGGCAATGACGGTTGTGAAGATATAGTAGCTTCTGTAAAGAAACTCTCTCTGGCATCATCTTCATCAGATAGTGAAGATTTGGATCCATTTCGTGCTCTATTAGCAGTATGTGGACAGTCAGTTCCCTTAAAATTTAGGGATGTTTTTTCTTCCTATTGTGACCTAGACAAGATTACCAAAATCGGGGAAGGAACATTTGGAGAAGCTTTCAACGCTGGCAACTATGTTTGCAAAATAGTCCCAATTGATGGTAACATACTAGTGAATGGGGAAGTGCAAAAGAGATCTGAAGAATTGCTAGAAGAGGTCGTACTTTCCCGCACTCTTAATTACTTAAGAGGACATGAGGGTGATTTTCAAAATGCTTGCACCATGTTTATCGAAACCATAGATTTGAGAGTATGCCAAGGCTCTTATGATGCTGCTTTGATCAGCGCATGGGAGGATTGGGATGAAGATCATGGTTCAGAAAATGATCACCCTAAGGCGTTTCCAGATAACCAGTGCTATGTCGTGTTTGTTTTAGAGCATGGTGGCAAGGATCTGGAAAGCTTTGTACTTCGGAACACTGATGAGGCACGGAGTTTATTGGTCCAGGTTACAGCTGCCCTTGCTGTAGCTGAAGCTGCATATGAATTTGAGCACCGTGATCTTCACTGGGGAAACATCCTTTTAAGTCGGAATGATTCTGTTACAATGCCGTTCACTCTTGAGGGAAAACAGATGTTTATCCAAACATTTGGATTGGGGATGTCAATAATAGATTTCACTCTTTCAAGAATCAACACTGGTGATGACATACTCTTTCTAGACCTATCTTCGGATCCTGAGCTCTTTAAAGGTCCAAAGGGCGATAAACAATCAGAAACATACCGGAAGATGAAGGAGGTAACAGAAGACTGCTGGGAGGGAAGCTTCCCCCGAACAAATGCACTGTGGTTGATGTACCTGGTGGATGTCTTACTGCTAAAGAAATCATTTGAACGAACTTCAAAAGACGAGAGAGATTTCCGTTCATTGAAGAAGCGTCTCGACAAATATCAGTCAGCCAGAGAAGCACTTCTTGATCCCTCTTTCAGTAATTTGTTGGTTGATGGTGGCATTTGA

Protein Analysis

600

Amino Acids

66.96

Weight (kDa)

5.74

Isoelectric Point (pI)

43.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 682
AccB7I CCANNNNNTGG 1 cut(s) 941
AciI CCGC 3 cut(s) 410, 541, 1012
AclWI GGATC 6 cut(s) 770, 783, 1242, 1511, 1524, 1754
AcsI RAATTY 4 cut(s) 320, 598, 824, 1328
AcuI CTGAAG 3 cut(s) 537, 1002, 1335
AfaI GTAC 5 cut(s) 317, 427, 1005, 1251, 1640
AfiI CCNNNNNNNGG 6 cut(s) 158, 566, 692, 876, 941, 1513
AflII CTTAAG 1 cut(s) 1027
AhlI ACTAGT 1 cut(s) 952
AjnI CCWGG 2 cut(s) 1287, 1641
AjuI GAANNNNNNNTTGG 2 cut(s) 873, 905
AloI GAACNNNNNNTCC 2 cut(s) 798, 830
Alw21I GWGCWC 5 cut(s) 166, 452, 790, 1338, 1527
Alw26I GTCTC 1 cut(s) 1727
AlwI GGATC 6 cut(s) 770, 783, 1242, 1511, 1524, 1754
AoxI GGCC 1 cut(s) 542
ApeKI GCWGC 5 cut(s) 155, 296, 1115, 1298, 1319
ApoI RAATTY 4 cut(s) 320, 598, 824, 1328
Asp700I GAANNNNTTC 1 cut(s) 1752
AspLEI GCGC 1 cut(s) 1130
AspS9I GGNCC 4 cut(s) 186, 543, 1285, 1535
AsuHPI GGTGA 4 cut(s) 151, 1055, 1163, 1496
AvaII GGWCC 3 cut(s) 186, 1285, 1535
AxyI CCTNAGG 1 cut(s) 1176
BamHI GGATCC 2 cut(s) 775, 1516
BanI GGYRCC 1 cut(s) 682
BanII GRGCYC 3 cut(s) 166, 383, 1527
BarI GAAGNNNNNNTAC 2 cut(s) 987, 1019
BbsI GAAGAC 1 cut(s) 1596
Bbv12I GWGCWC 5 cut(s) 166, 452, 790, 1338, 1527
BbvI GCAGC 5 cut(s) 142, 283, 1102, 1285, 1306
BccI CCATC 3 cut(s) 656, 935, 1781
BceAI ACGGC 1 cut(s) 1378
BciT130I CCWGG 2 cut(s) 1289, 1643
BclI TGATCA 2 cut(s) 1122, 1168
BcoDI GTCTC 1 cut(s) 1727
BcuI ACTAGT 1 cut(s) 952
BfaI CTAG 5 cut(s) 603, 857, 953, 992, 1502
BfmI CTRYAG 2 cut(s) 524, 1308
BfrI CTTAAG 1 cut(s) 1027
BglII AGATCT 1 cut(s) 977
BisI GCNGC 6 cut(s) 156, 297, 542, 1116, 1299, 1320
BlsI GCNGC 6 cut(s) 157, 298, 543, 1117, 1300, 1321
Bme1390I CCNGG 2 cut(s) 1289, 1643
Bme18I GGWCC 3 cut(s) 186, 1285, 1535
BmgT120I GGNCC 4 cut(s) 186, 543, 1285, 1535
BmiI GGNNCC 6 cut(s) 150, 188, 264, 684, 777, 1518
BmrFI CCNGG 2 cut(s) 1289, 1643
BmrI ACTGGG 1 cut(s) 1360
BmsI GCATC 3 cut(s) 346, 755, 1102
BmuI ACTGGG 1 cut(s) 1360
BpiI GAAGAC 1 cut(s) 1596
BplI GAGNNNNNCTC 6 cut(s) 133, 165, 368, 400, 370, 402
BpmI CTGGAG 1 cut(s) 180
Bpu10I CCTNAGC 1 cut(s) 1521
BpuEI CTTGAG 2 cut(s) 72, 1424
BsaBI GATNNNNATC 3 cut(s) 774, 1149, 1421
BsaJI CCNNGG 1 cut(s) 1099
BsaWI WCCGGW 1 cut(s) 1566
BsaXI ACNNNNNCTCC 4 cut(s) 9, 39, 202, 232
Bsc4I CCNNNNNNNGG 6 cut(s) 158, 566, 692, 876, 941, 1513
Bse1I ACTGG 5 cut(s) 180, 427, 1195, 1355, 1486
Bse21I CCTNAGG 1 cut(s) 1176
Bse3DI GCAATG 1 cut(s) 703
Bse8I GATNNNNATC 3 cut(s) 774, 1149, 1421
BseBI CCWGG 2 cut(s) 1289, 1643
BseDI CCNNGG 1 cut(s) 1099
BseGI GGATG 7 cut(s) 247, 694, 838, 1150, 1359, 1449, 1654
BseJI GATNNNNATC 3 cut(s) 774, 1149, 1421
BseLI CCNNNNNNNGG 6 cut(s) 158, 566, 692, 876, 941, 1513
BseMI GCAATG 1 cut(s) 703
BseMII CTCAG 1 cut(s) 1512
BseNI ACTGG 5 cut(s) 180, 427, 1195, 1355, 1486
BseRI GAGGAG 2 cut(s) 344, 389
BseXI GCAGC 5 cut(s) 142, 283, 1102, 1285, 1306
BseYI CCCAGC 1 cut(s) 1596
BshFI GGCC 1 cut(s) 544
BshNI GGYRCC 1 cut(s) 682
BsiHKAI GWGCWC 5 cut(s) 166, 452, 790, 1338, 1527
BsiSI CCGG 2 cut(s) 686, 1567
BslFI GGGAC 1 cut(s) 917
BslI CCNNNNNNNGG 6 cut(s) 158, 566, 692, 876, 941, 1513
BsmAI GTCTC 1 cut(s) 1727
BsmBI CGTCTC 1 cut(s) 1727
BsmFI GGGAC 1 cut(s) 917
BsnI GGCC 1 cut(s) 544
Bsp1286I GDGCHC 6 cut(s) 166, 383, 452, 790, 1338, 1527
BspACI CCGC 3 cut(s) 410, 541, 1012
BspANI GGCC 1 cut(s) 544
BspCNI CTCAG 1 cut(s) 1513
BspLI GGNNCC 6 cut(s) 150, 188, 264, 684, 777, 1518
BspMAI CTGCAG 1 cut(s) 528
BspPI GGATC 6 cut(s) 770, 783, 1242, 1511, 1524, 1754
BspQI GCTCTTC 1 cut(s) 306
BspT107I GGYRCC 1 cut(s) 682
BspTI CTTAAG 1 cut(s) 1027
BsrDI GCAATG 1 cut(s) 703
BsrI ACTGG 5 cut(s) 180, 427, 1195, 1355, 1486
BssECI CCNNGG 1 cut(s) 1099
BssT1I CCWWGG 1 cut(s) 1099
Bst2UI CCWGG 2 cut(s) 1289, 1643
Bst4CI ACNGT 7 cut(s) 45, 430, 682, 704, 810, 1340, 1629
Bst6I CTCTTC 3 cut(s) 306, 321, 990
BstAFI CTTAAG 1 cut(s) 1027
BstC8I GCNNGC 3 cut(s) 412, 910, 1060
BstDEI CTNAG 3 cut(s) 516, 1176, 1521
BstF5I GGATG 7 cut(s) 247, 694, 838, 1150, 1359, 1449, 1654
BstHHI GCGC 1 cut(s) 1130
BstMAI GTCTC 1 cut(s) 1727
BstMWI GCNNNNNNNGC 8 cut(s) 155, 161, 631, 794, 905, 1304, 1319, 1748
BstNI CCWGG 2 cut(s) 1289, 1643
BstSCI CCNGG 2 cut(s) 1287, 1641
BstSFI CTRYAG 2 cut(s) 524, 1308
BstV1I GCAGC 5 cut(s) 142, 283, 1102, 1285, 1306
BstV2I GAAGAC 1 cut(s) 1596
BstX2I RGATCY 4 cut(s) 775, 977, 1234, 1516
BstXI CCANNNNNNTGG 1 cut(s) 1433
BstYI RGATCY 4 cut(s) 775, 977, 1234, 1516
Bsu36I CCTNAGG 1 cut(s) 1176
BsuRI GGCC 1 cut(s) 544
BtsCI GGATG 7 cut(s) 247, 694, 838, 1150, 1359, 1449, 1654
BtsIMutI CAGTG 6 cut(s) 50, 1202, 1260, 1348, 1479, 1625
Cac8I GCNNGC 3 cut(s) 412, 910, 1060
CfoI GCGC 1 cut(s) 1130
Cfr13I GGNCC 4 cut(s) 186, 543, 1285, 1535
CseI GACGC 1 cut(s) 1709
CsiI ACCWGGT 1 cut(s) 1641
Csp6I GTAC 5 cut(s) 316, 426, 1004, 1250, 1639
CviAII CATG 8 cut(s) 114, 402, 538, 1037, 1066, 1131, 1154, 1223
CviQI GTAC 5 cut(s) 316, 426, 1004, 1250, 1639
DdeI CTNAG 3 cut(s) 516, 1176, 1521
DraI TTTAAA 1 cut(s) 1531
Eam1104I CTCTTC 3 cut(s) 306, 321, 990
EarI CTCTTC 3 cut(s) 306, 321, 990
Ecl136II GAGCTC 2 cut(s) 164, 1525
Eco130I CCWWGG 1 cut(s) 1099
Eco24I GRGCYC 3 cut(s) 166, 383, 1527
Eco47I GGWCC 3 cut(s) 186, 1285, 1535
Eco53kI GAGCTC 2 cut(s) 164, 1525
Eco57I CTGAAG 3 cut(s) 537, 1002, 1335
Eco81I CCTNAGG 1 cut(s) 1176
EcoICRI GAGCTC 2 cut(s) 164, 1525
EcoRII CCWGG 2 cut(s) 1287, 1641
EcoT14I CCWWGG 1 cut(s) 1099
EcoT38I GRGCYC 3 cut(s) 166, 383, 1527
ErhI CCWWGG 1 cut(s) 1099
Esp3I CGTCTC 1 cut(s) 1727
FaeI CATG 8 cut(s) 117, 405, 541, 1040, 1069, 1134, 1157, 1226
FalI AAGNNNNNCTT 8 cut(s) 285, 317, 326, 358, 470, 502, 1740, 1772
FaqI GGGAC 1 cut(s) 917
FatI CATG 8 cut(s) 113, 401, 537, 1036, 1065, 1130, 1153, 1222
FauI CCCGC 2 cut(s) 403, 1019
FauNDI CATATG 1 cut(s) 1324
FbaI TGATCA 2 cut(s) 1122, 1168
Fnu4HI GCNGC 6 cut(s) 156, 297, 542, 1116, 1299, 1320
FokI GGATG 7 cut(s) 234, 701, 845, 1157, 1346, 1456, 1661
FriOI GRGCYC 3 cut(s) 166, 383, 1527
Fsp4HI GCNGC 6 cut(s) 156, 297, 542, 1116, 1299, 1320
FspBI CTAG 5 cut(s) 603, 857, 953, 992, 1502
GlaI GCGC 1 cut(s) 1129
GluI GCNGC 6 cut(s) 156, 297, 542, 1116, 1299, 1320
GsaI CCCAGC 1 cut(s) 1600
GsuI CTGGAG 1 cut(s) 180
HaeIII GGCC 1 cut(s) 544
HapII CCGG 2 cut(s) 686, 1567
HgaI GACGC 1 cut(s) 1709
HhaI GCGC 1 cut(s) 1130
Hin1II CATG 8 cut(s) 117, 405, 541, 1040, 1069, 1134, 1157, 1226
Hin6I GCGC 1 cut(s) 1128
HinP1I GCGC 1 cut(s) 1128
HindIII AAGCTT 3 cut(s) 897, 1243, 1606
HinfI GANTC 2 cut(s) 1379, 1473
HpaII CCGG 2 cut(s) 686, 1567
HphI GGTGA 4 cut(s) 151, 1055, 1163, 1496
Hpy166II GTNNAC 2 cut(s) 806, 1398
Hpy188I TCNGA 8 cut(s) 556, 760, 982, 1162, 1257, 1374, 1516, 1558
Hpy8I GTNNAC 2 cut(s) 806, 1398
HpyAV CCTTC 7 cut(s) 129, 328, 510, 561, 636, 875, 1570
HpyCH4III ACNGT 7 cut(s) 45, 430, 682, 704, 810, 1340, 1629
HpyCH4V TGCA 8 cut(s) 434, 526, 634, 924, 970, 1062, 1322, 1625
HpyF10VI GCNNNNNNNGC 8 cut(s) 155, 161, 631, 794, 905, 1304, 1319, 1748
HpyF3I CTNAG 3 cut(s) 516, 1176, 1521
Hsp92II CATG 8 cut(s) 117, 405, 541, 1040, 1069, 1134, 1157, 1226
HspAI GCGC 1 cut(s) 1128
Ksp22I TGATCA 2 cut(s) 1122, 1168
LguI GCTCTTC 1 cut(s) 306
LmnI GCTCC 3 cut(s) 154, 161, 262
Lsp1109I GCAGC 5 cut(s) 142, 283, 1102, 1285, 1306
LweI GCATC 3 cut(s) 346, 755, 1102
MabI ACCWGGT 1 cut(s) 1641
MaeI CTAG 5 cut(s) 603, 857, 953, 992, 1502
MaeIII GTNAC 6 cut(s) 569, 851, 944, 1291, 1384, 1582
MfeI CAATTG 1 cut(s) 936
MflI RGATCY 4 cut(s) 775, 977, 1234, 1516
MhlI GDGCHC 6 cut(s) 166, 383, 452, 790, 1338, 1527
MmeI TCCRAC 3 cut(s) 164, 351, 1352
MroXI GAANNNNTTC 1 cut(s) 1752
MseI TTAA 5 cut(s) 821, 1020, 1028, 1367, 1530
MslI CAYNNNNRTG 2 cut(s) 953, 1041
MspA1I CMGCKG 1 cut(s) 1298
MspCI CTTAAG 1 cut(s) 1027
MspI CCGG 2 cut(s) 686, 1567
MspR9I CCNGG 2 cut(s) 1289, 1643
MunI CAATTG 1 cut(s) 936
MvaI CCWGG 2 cut(s) 1289, 1643
MwoI GCNNNNNNNGC 8 cut(s) 155, 161, 631, 794, 905, 1304, 1319, 1748
NdeI CATATG 1 cut(s) 1324
NlaIII CATG 8 cut(s) 117, 405, 541, 1040, 1069, 1134, 1157, 1226
NlaIV GGNNCC 6 cut(s) 150, 188, 264, 684, 777, 1518
NmuCI GTSAC 1 cut(s) 851
PciSI GCTCTTC 1 cut(s) 306
PdmI GAANNNNTTC 1 cut(s) 1752
PfeI GAWTC 2 cut(s) 1379, 1473
PflMI CCANNNNNTGG 1 cut(s) 941
PkrI GCNGC 6 cut(s) 157, 298, 543, 1117, 1300, 1321
Psp124BI GAGCTC 2 cut(s) 166, 1527
Psp6I CCWGG 2 cut(s) 1287, 1641
PspFI CCCAGC 1 cut(s) 1596
PspGI CCWGG 2 cut(s) 1287, 1641
PspN4I GGNNCC 6 cut(s) 150, 188, 264, 684, 777, 1518
PspPI GGNCC 4 cut(s) 186, 543, 1285, 1535
PstI CTGCAG 1 cut(s) 528
PsuI RGATCY 4 cut(s) 775, 977, 1234, 1516
PvuII CAGCTG 1 cut(s) 1298
RsaI GTAC 5 cut(s) 317, 427, 1005, 1251, 1640
RsaNI GTAC 5 cut(s) 316, 426, 1004, 1250, 1639
RseI CAYNNNNRTG 2 cut(s) 953, 1041
SacI GAGCTC 2 cut(s) 166, 1527
SapI GCTCTTC 1 cut(s) 306
SaqAI TTAA 5 cut(s) 821, 1020, 1028, 1367, 1530
SatI GCNGC 6 cut(s) 156, 297, 542, 1116, 1299, 1320
Sau96I GGNCC 4 cut(s) 186, 543, 1285, 1535
ScrFI CCNGG 2 cut(s) 1289, 1643
SduI GDGCHC 6 cut(s) 166, 383, 452, 790, 1338, 1527
SexAI ACCWGGT 1 cut(s) 1641
SfaNI GCATC 3 cut(s) 346, 755, 1102
SfcI CTRYAG 2 cut(s) 524, 1308
SinI GGWCC 3 cut(s) 186, 1285, 1535
SmiMI CAYNNNNRTG 2 cut(s) 953, 1041
SmlI CTYRAG 3 cut(s) 87, 1027, 1403
SmoI CTYRAG 3 cut(s) 87, 1027, 1403
SpeI ACTAGT 1 cut(s) 952
SsiI CCGC 3 cut(s) 410, 541, 1012
SspMI CTAG 5 cut(s) 603, 857, 953, 992, 1502
SstI GAGCTC 2 cut(s) 166, 1527
StyD4I CCNGG 2 cut(s) 1287, 1641
StyI CCWWGG 1 cut(s) 1099
TaaI ACNGT 7 cut(s) 45, 430, 682, 704, 810, 1340, 1629
TaqI TCGA 3 cut(s) 495, 1074, 1725
TatI WGTACW 2 cut(s) 315, 1249
TauI GCSGC 1 cut(s) 544
TfiI GAWTC 2 cut(s) 1379, 1473
Tru1I TTAA 5 cut(s) 821, 1020, 1028, 1367, 1530
Tru9I TTAA 5 cut(s) 821, 1020, 1028, 1367, 1530
TscAI CASTG 6 cut(s) 50, 1202, 1267, 1355, 1486, 1632
TseFI GTSAC 1 cut(s) 851
TseI GCWGC 5 cut(s) 155, 296, 1115, 1298, 1319
Tsp45I GTSAC 1 cut(s) 851
TspDTI ATGAA 5 cut(s) 744, 1161, 1341, 1589, 1698
TspGWI ACGGA 2 cut(s) 1288, 1694
TspRI CASTG 6 cut(s) 50, 1202, 1267, 1355, 1486, 1632
Van91I CCANNNNNTGG 1 cut(s) 941
Vha464I CTTAAG 1 cut(s) 1027
VpaK11BI GGWCC 3 cut(s) 186, 1285, 1535
XapI RAATTY 4 cut(s) 320, 598, 824, 1328
XbaI TCTAGA 1 cut(s) 1501
XcmI CCANNNNNNNNNTGG 1 cut(s) 462
XmnI GAANNNNTTC 1 cut(s) 1752
XspI CTAG 5 cut(s) 603, 857, 953, 992, 1502
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.