Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0014032

Physical Location & Seq

Genomic Coordinates Forward (+)

28097479 .. 28101647

Gene Structure 4169 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G315000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1089 bp

ATGGTGAGCTCAAAGACTTTCTTCGCTTTCGGAGCCCTAGCTCTGCTCTTTGCCGCGTCGGTCTTCGCAGACGATGTCGTTGTACTCACGGAGGAAAACTTTGAGAGCCACGTCGGTCAAGATCGGGCTGCTCTCGTCGAGTTCTACGCTCCCTGGTGTGGCCATTGTAAAAAGCTTGCTCCAGAGTATGAGAAGCTTGGCTCAAGTTTTAAGAAAGCAAAATCCATTTTAATTGGAAAGGTAGACTGTGATGAGCACAAGGGCGTTTGTAGCAAATATGGAGTTTCTGGGTATCCCACAATTCAATGGTTTCCAAAAGGATCCCTAGAACCCAAAAAGTATGAAGGTGGCCGCACTGCAGAAGCTCTTGCTGAGTTTGTGAATAAGGAAGGAGGGACCAACGTGAAGATTTCTGCAGCCCCCTCCAATGTTGCGGTCCTTACCCAGGATAATTTCAATGAGGTTGTCCTGGACGAAACAAAAGATGTGCTGGTGGAGTTCTATGCACCATGGTGTGGACATTGCAAATCTCTTGCTCCTACTTACGAGAAGGTTGCAACAGCATTTAAGTTGGAGGAAGGTGTAGTGATTGCTAATCTTGATGCTGACAAATACAAGGATTTAGCTGAAAAGTATGGAGTAAGTGGATTTCCCACATTGAAATTTTTTCCAAAGAACAACAAGGAGGGTGAAGAGTATGGTGGTGGCAGAGATTTAGAAGATTTTGTAGATTTCATTAATGAGAAATCTGGCACTAGTAGAGATGGGAAAGGCCAACTTACTTCCAAAGCTGGTGTACTTGCAAATCTGGACGACTTAGTGAAGGAATTTGTGAAAGCTGGCAATGATGAGAAGAAGACAATCTTTTCCAAGATAGAAGAGGAAGTTAGGAAGCTTGAGGGTTCTGCTGCAAGATATGGTAAGATCTACTTGAAAGCTGCCGAGAACTCTTTAAAGAAAGGTGCTGATTATGCAAAGAATGAGATTCAGCGGCTTGAACGCATACTCGAGAAGTCTGTCAACCCAACCAAGGCAGATGAGTTCACTCTGAAGAAGAACATCCTATATACCTTTGCCTCATCTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003756 GO:0003824 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0006457 GO:0006950 GO:0007275 GO:0008150 GO:0009505 GO:0009553 GO:0009566 GO:0009567 GO:0009790 GO:0009791 GO:0009793 GO:0009856 GO:0009987 GO:0010035 GO:0010038 GO:0010154 GO:0012505 GO:0016020 GO:0016853 GO:0016860 GO:0016864 GO:0019953 GO:0022414 GO:0030312 GO:0031090 GO:0032501 GO:0032502 GO:0033554 GO:0034976 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0044706 GO:0046686 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0048868 GO:0050896 GO:0051704 GO:0051716 GO:0061458 GO:0071944 GO:0098588 GO:0098805 GO:0140096

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

ERp29 Thioredoxin

Protein Analysis

363

Amino Acids

39.89

Weight (kDa)

5.83

Isoelectric Point (pI)

24.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014032)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47470 AT2G47470 AT2G47470 AT2G47470
fragaria_vesca	FvH4_6g07230
malus_domestica	MD04G1195300.v1.1 MD12G1207400.v1.1
prunus_persica	Prupe.6G315000_v2.0.a1
pyrus_communis	pycom04g17250
rosa_chinensis	RchiOBHm_Chr3g0456861
rosa_laevigata	RLG00000025273
rosa_multiflora	Rmu_sc0000133.1_g000018
rosa_roxburghii	Rroxscaffold_6G00422430
rosa_rugosa	Rorug03G0016400
rosa_samantha	Rh3BG078600 Rh3CG078400
rosa_wichuraiana	Rw3G006590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	515
AccI	GTMKAC	1 cut(s)	243
AccII	CGCG	1 cut(s)	56
AciI	CCGC	4 cut(s)	54, 352, 434, 991
AclWI	GGATC	2 cut(s)	315, 328
AcoI	YGGCCR	2 cut(s)	160, 349
AcsI	RAATTY	2 cut(s)	662, 827
AcuI	CTGAAG	1 cut(s)	1070
AfaI	GTAC	2 cut(s)	84, 798
AfiI	CCNNNNNNNGG	4 cut(s)	158, 445, 515, 1030
AgsI	TTSAA	5 cut(s)	305, 457, 661, 934, 998
AhlI	ACTAGT	1 cut(s)	755
AjiI	CACGTC	1 cut(s)	112
AjnI	CCWGG	3 cut(s)	152, 444, 468
AleI	CACNNNNGTG	1 cut(s)	511
Alw21I	GWGCWC	2 cut(s)	11, 258
AlwI	GGATC	2 cut(s)	315, 328
Ama87I	CYCGRG	1 cut(s)	1007
AoxI	GGCC	3 cut(s)	160, 349, 772
ApeKI	GCWGC	4 cut(s)	128, 416, 908, 938
ApoI	RAATTY	2 cut(s)	662, 827
AseI	ATTAAT	1 cut(s)	738
AspS9I	GGNCC	2 cut(s)	396, 436
AsuHPI	GGTGA	2 cut(s)	16, 701
AvaI	CYCGRG	1 cut(s)	1007
AvaII	GGWCC	2 cut(s)	396, 436
BalI	TGGCCA	1 cut(s)	162
BamHI	GGATCC	1 cut(s)	320
BanII	GRGCYC	2 cut(s)	11, 37
BbsI	GAAGAC	2 cut(s)	55, 863
Bbv12I	GWGCWC	2 cut(s)	11, 258
BbvI	GCAGC	4 cut(s)	115, 428, 895, 925
BccI	CCATC	1 cut(s)	758
BcgI	CGANNNNNNTGC	2 cut(s)	536, 570
BciT130I	CCWGG	3 cut(s)	154, 446, 470
BciVI	GTATCC	1 cut(s)	303
BcuI	ACTAGT	1 cut(s)	755
BfaI	CTAG	3 cut(s)	38, 326, 756
BfmI	CTRYAG	2 cut(s)	357, 414
BfuI	GTATCC	1 cut(s)	303
BglII	AGATCT	1 cut(s)	924
BisI	GCNGC	7 cut(s)	54, 129, 352, 417, 909, 939, 992
BlsI	GCNGC	7 cut(s)	55, 130, 353, 418, 910, 940, 993
Bme1390I	CCNGG	3 cut(s)	154, 446, 470
Bme18I	GGWCC	2 cut(s)	396, 436
BmeT110I	CYCGRG	1 cut(s)	1007
BmgBI	CACGTC	1 cut(s)	112
BmgT120I	GGNCC	2 cut(s)	396, 436
BmiI	GGNNCC	3 cut(s)	34, 322, 397
BmrFI	CCNGG	3 cut(s)	154, 446, 470
BmsI	GCATC	1 cut(s)	592
BpiI	GAAGAC	2 cut(s)	55, 863
BpmI	CTGGAG	1 cut(s)	165
BpuEI	CTTGAG	2 cut(s)	187, 917
BsaJI	CCNNGG	4 cut(s)	152, 444, 509, 1029
Bsc4I	CCNNNNNNNGG	4 cut(s)	158, 445, 515, 1030
Bse3DI	GCAATG	2 cut(s)	520, 850
BseBI	CCWGG	3 cut(s)	154, 446, 470
BseDI	CCNNGG	4 cut(s)	152, 444, 509, 1029
BseGI	GGATG	1 cut(s)	1059
BseLI	CCNNNNNNNGG	4 cut(s)	158, 445, 515, 1030
BseMI	GCAATG	2 cut(s)	520, 850
BseMII	CTCAG	1 cut(s)	363
BseXI	GCAGC	4 cut(s)	115, 428, 895, 925
Bsh1236I	CGCG	1 cut(s)	56
BshFI	GGCC	3 cut(s)	162, 351, 774
BsiHKAI	GWGCWC	2 cut(s)	11, 258
BsiHKCI	CYCGRG	1 cut(s)	1007
BslFI	GGGAC	1 cut(s)	409
BslI	CCNNNNNNNGG	4 cut(s)	158, 445, 515, 1030
BsmFI	GGGAC	1 cut(s)	409
BsnI	GGCC	3 cut(s)	162, 351, 774
BsoBI	CYCGRG	1 cut(s)	1007
Bsp1286I	GDGCHC	3 cut(s)	11, 37, 258
Bsp143I	GATC	3 cut(s)	121, 320, 924
Bsp19I	CCATGG	1 cut(s)	509
BspACI	CCGC	4 cut(s)	54, 352, 434, 991
BspANI	GGCC	3 cut(s)	162, 351, 774
BspCNI	CTCAG	1 cut(s)	364
BspFNI	CGCG	1 cut(s)	56
BspHI	TCATGA	1 cut(s)	1085
BspLI	GGNNCC	3 cut(s)	34, 322, 397
BspMAI	CTGCAG	2 cut(s)	361, 418
BspPI	GGATC	2 cut(s)	315, 328
BsrDI	GCAATG	2 cut(s)	520, 850
BssECI	CCNNGG	4 cut(s)	152, 444, 509, 1029
BssMI	GATC	3 cut(s)	121, 320, 924
BssT1I	CCWWGG	2 cut(s)	509, 1029
Bst2UI	CCWGG	3 cut(s)	154, 446, 470
Bst4CI	ACNGT	1 cut(s)	248
Bst6I	CTCTTC	2 cut(s)	687, 873
BstC8I	GCNNGC	2 cut(s)	177, 841
BstDEI	CTNAG	2 cut(s)	372, 817
BstDSI	CCRYGG	1 cut(s)	509
BstENI	CCTNNNNNAGG	1 cut(s)	443
BstF5I	GGATG	1 cut(s)	1059
BstFNI	CGCG	1 cut(s)	56
BstKTI	GATC	3 cut(s)	124, 323, 927
BstMBI	GATC	3 cut(s)	121, 320, 924
BstMWI	GCNNNNNNNGC	3 cut(s)	32, 270, 971
BstNI	CCWGG	3 cut(s)	154, 446, 470
BstSCI	CCNGG	3 cut(s)	152, 444, 468
BstSFI	CTRYAG	2 cut(s)	357, 414
BstUI	CGCG	1 cut(s)	56
BstV1I	GCAGC	4 cut(s)	115, 428, 895, 925
BstV2I	GAAGAC	2 cut(s)	55, 863
BstX2I	RGATCY	2 cut(s)	320, 924
BstYI	RGATCY	2 cut(s)	320, 924
BsuI	GTATCC	1 cut(s)	303
BsuRI	GGCC	3 cut(s)	162, 351, 774
BtgI	CCRYGG	1 cut(s)	509
BtrI	CACGTC	1 cut(s)	112
BtsCI	GGATG	1 cut(s)	1059
BtsI	GCAGTG	1 cut(s)	354
BtsIMutI	CAGTG	1 cut(s)	354
Cac8I	GCNNGC	2 cut(s)	177, 841
CciI	TCATGA	1 cut(s)	1085
Cfr13I	GGNCC	2 cut(s)	396, 436
CseI	GACGC	1 cut(s)	45
Csp6I	GTAC	2 cut(s)	83, 797
CviAII	CATG	2 cut(s)	510, 1086
CviQI	GTAC	2 cut(s)	83, 797
DdeI	CTNAG	2 cut(s)	372, 817
DpnI	GATC	3 cut(s)	123, 322, 926
DpnII	GATC	3 cut(s)	121, 320, 924
DraI	TTTAAA	1 cut(s)	954
EaeI	YGGCCR	2 cut(s)	160, 349
Eam1104I	CTCTTC	2 cut(s)	687, 873
EarI	CTCTTC	2 cut(s)	687, 873
Ecl136II	GAGCTC	1 cut(s)	9
Eco130I	CCWWGG	2 cut(s)	509, 1029
Eco24I	GRGCYC	2 cut(s)	11, 37
Eco47I	GGWCC	2 cut(s)	396, 436
Eco53kI	GAGCTC	1 cut(s)	9
Eco57I	CTGAAG	1 cut(s)	1070
Eco88I	CYCGRG	1 cut(s)	1007
EcoICRI	GAGCTC	1 cut(s)	9
EcoNI	CCTNNNNNAGG	1 cut(s)	443
EcoRII	CCWGG	3 cut(s)	152, 444, 468
EcoT14I	CCWWGG	2 cut(s)	509, 1029
EcoT38I	GRGCYC	2 cut(s)	11, 37
ErhI	CCWWGG	2 cut(s)	509, 1029
FaeI	CATG	2 cut(s)	513, 1089
FalI	AAGNNNNNCTT	7 cut(s)	37, 762, 794, 848, 880, 914, 946
FaqI	GGGAC	1 cut(s)	409
FatI	CATG	2 cut(s)	509, 1085
FblI	GTMKAC	1 cut(s)	243
Fnu4HI	GCNGC	7 cut(s)	54, 129, 352, 417, 909, 939, 992
FokI	GGATG	1 cut(s)	1046
FriOI	GRGCYC	2 cut(s)	11, 37
Fsp4HI	GCNGC	7 cut(s)	54, 129, 352, 417, 909, 939, 992
FspBI	CTAG	3 cut(s)	38, 326, 756
GluI	GCNGC	7 cut(s)	54, 129, 352, 417, 909, 939, 992
GsuI	CTGGAG	1 cut(s)	165
HaeIII	GGCC	3 cut(s)	162, 351, 774
HgaI	GACGC	1 cut(s)	45
Hin1II	CATG	2 cut(s)	513, 1089
HincII	GTYRAC	1 cut(s)	1021
HindII	GTYRAC	1 cut(s)	1021
HindIII	AAGCTT	3 cut(s)	173, 194, 893
HinfI	GANTC	1 cut(s)	985
HphI	GGTGA	2 cut(s)	16, 701
Hpy166II	GTNNAC	5 cut(s)	244, 518, 797, 1021, 1044
Hpy188I	TCNGA	2 cut(s)	32, 1050
Hpy188III	TCNNGA	6 cut(s)	119, 182, 599, 809, 1009, 1086
Hpy8I	GTNNAC	5 cut(s)	244, 518, 797, 1021, 1044
Hpy99I	CGWCG	3 cut(s)	61, 116, 140
HpyAV	CCTTC	5 cut(s)	338, 383, 544, 572, 817
HpyCH4III	ACNGT	1 cut(s)	248
HpyCH4IV	ACGT	2 cut(s)	111, 402
HpyCH4V	TGCA	8 cut(s)	359, 416, 506, 525, 557, 803, 911, 974
HpyF10VI	GCNNNNNNNGC	3 cut(s)	32, 270, 971
HpyF3I	CTNAG	2 cut(s)	372, 817
HpySE526I	ACGT	2 cut(s)	111, 402
Hsp92II	CATG	2 cut(s)	513, 1089
Kzo9I	GATC	3 cut(s)	121, 320, 924
LmnI	GCTCC	4 cut(s)	32, 154, 184, 541
Lsp1109I	GCAGC	4 cut(s)	115, 428, 895, 925
LweI	GCATC	1 cut(s)	592
MaeI	CTAG	3 cut(s)	38, 326, 756
MaeII	ACGT	2 cut(s)	111, 402
MalI	GATC	3 cut(s)	123, 322, 926
MboI	GATC	3 cut(s)	121, 320, 924
MflI	RGATCY	2 cut(s)	320, 924
MhlI	GDGCHC	3 cut(s)	11, 37, 258
MlsI	TGGCCA	1 cut(s)	162
MluCI	AATT	5 cut(s)	231, 300, 451, 662, 827
MluNI	TGGCCA	1 cut(s)	162
MmeI	TCCRAC	1 cut(s)	552
MnlI	CCTC	9 cut(s)	85, 386, 433, 454, 568, 679, 874, 892, 1087
Mox20I	TGGCCA	1 cut(s)	162
MscI	TGGCCA	1 cut(s)	162
MseI	TTAA	5 cut(s)	210, 230, 567, 738, 953
MslI	CAYNNNNRTG	2 cut(s)	511, 1084
Msp20I	TGGCCA	1 cut(s)	162
MspA1I	CMGCKG	1 cut(s)	991
MspR9I	CCNGG	3 cut(s)	154, 446, 470
MvaI	CCWGG	3 cut(s)	154, 446, 470
MvnI	CGCG	1 cut(s)	56
MwoI	GCNNNNNNNGC	3 cut(s)	32, 270, 971
NcoI	CCATGG	1 cut(s)	509
NdeII	GATC	3 cut(s)	121, 320, 924
NlaIII	CATG	2 cut(s)	513, 1089
NlaIV	GGNNCC	3 cut(s)	34, 322, 397
NmeAIII	GCCGAG	1 cut(s)	967
OliI	CACNNNNGTG	1 cut(s)	511
PaeR7I	CTCGAG	1 cut(s)	1007
PagI	TCATGA	1 cut(s)	1085
PfeI	GAWTC	1 cut(s)	985
PflFI	GACNNNGTC	1 cut(s)	74
PflMI	CCANNNNNTGG	1 cut(s)	515
PfoI	TCCNGGA	1 cut(s)	468
PkrI	GCNGC	7 cut(s)	55, 130, 353, 418, 910, 940, 993
PshBI	ATTAAT	1 cut(s)	738
Psp124BI	GAGCTC	1 cut(s)	11
Psp6I	CCWGG	3 cut(s)	152, 444, 468
PspGI	CCWGG	3 cut(s)	152, 444, 468
PspN4I	GGNNCC	3 cut(s)	34, 322, 397
PspPI	GGNCC	2 cut(s)	396, 436
PstI	CTGCAG	2 cut(s)	361, 418
PsuI	RGATCY	2 cut(s)	320, 924
PsyI	GACNNNGTC	1 cut(s)	74
RsaI	GTAC	2 cut(s)	84, 798
RsaNI	GTAC	2 cut(s)	83, 797
RseI	CAYNNNNRTG	2 cut(s)	511, 1084
SacI	GAGCTC	1 cut(s)	11
SaqAI	TTAA	5 cut(s)	210, 230, 567, 738, 953
SatI	GCNGC	7 cut(s)	54, 129, 352, 417, 909, 939, 992
Sau3AI	GATC	3 cut(s)	121, 320, 924
Sau96I	GGNCC	2 cut(s)	396, 436
ScrFI	CCNGG	3 cut(s)	154, 446, 470
SduI	GDGCHC	3 cut(s)	11, 37, 258
SfaNI	GCATC	1 cut(s)	592
SfcI	CTRYAG	2 cut(s)	357, 414
Sfr274I	CTCGAG	1 cut(s)	1007
SinI	GGWCC	2 cut(s)	396, 436
SlaI	CTCGAG	1 cut(s)	1007
SmiMI	CAYNNNNRTG	2 cut(s)	511, 1084
SmlI	CTYRAG	3 cut(s)	202, 896, 1007
SmoI	CTYRAG	3 cut(s)	202, 896, 1007
SpeI	ACTAGT	1 cut(s)	755
Sse9I	AATT	5 cut(s)	231, 300, 451, 662, 827
SsiI	CCGC	4 cut(s)	54, 352, 434, 991
SspMI	CTAG	3 cut(s)	38, 326, 756
SstI	GAGCTC	1 cut(s)	11
StyD4I	CCNGG	3 cut(s)	152, 444, 468
StyI	CCWWGG	2 cut(s)	509, 1029
TaaI	ACNGT	1 cut(s)	248
TaiI	ACGT	2 cut(s)	114, 405
TaqI	TCGA	2 cut(s)	138, 1008
TaqII	GACCGA	2 cut(s)	49, 104
TasI	AATT	5 cut(s)	231, 300, 451, 662, 827
TatI	WGTACW	2 cut(s)	82, 796
TauI	GCSGC	3 cut(s)	56, 354, 994
TfiI	GAWTC	1 cut(s)	985
Tru1I	TTAA	5 cut(s)	210, 230, 567, 738, 953
Tru9I	TTAA	5 cut(s)	210, 230, 567, 738, 953
TscAI	CASTG	1 cut(s)	361
TseI	GCWGC	4 cut(s)	128, 416, 908, 938
TspDTI	ATGAA	3 cut(s)	357, 724, 1074
TspGWI	ACGGA	1 cut(s)	104
TspRI	CASTG	1 cut(s)	361
Tth111I	GACNNNGTC	1 cut(s)	74
Van91I	CCANNNNNTGG	1 cut(s)	515
VpaK11BI	GGWCC	2 cut(s)	396, 436
VspI	ATTAAT	1 cut(s)	738
XagI	CCTNNNNNAGG	1 cut(s)	443
XapI	RAATTY	2 cut(s)	662, 827
XhoI	CTCGAG	1 cut(s)	1007
XmiI	GTMKAC	1 cut(s)	243
XspI	CTAG	3 cut(s)	38, 326, 756

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.