Prupe.6G345400_v2.0.a1

NAD(P)-binding Rossmann-like domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
29638637 .. 29641966
3330 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G345400.4

Sequence Viewer

Length: 1437 bp
ATGCTCTGCTACTTTCACTCTTCTCTATTCCTCCAACCCCTCAAAATCCACAAGCCCCTAACTATAGTCTGCTCTACCCAACCCAAACCACCACCCAGGAAACGACCCACCGTGGATGGCCAAAGACCCGCCTTTAGGAACCGTAAGAACTATGGTGCGTCAAGAAGGTCAATTCAGAAAACACTCAAGCAAGAGCAGGTGACCTTCACTACTCCAATCCCTGATGACCCCATTGTTGGTATAATCGGCGGAGGCATGGCTGGTCTCGCTTGTGCTCTCTATCTGGAAAAACGCGGTGTCCGCTCCACCGTTTTTGACACGGGTGTTCATGGTTTGGGAGGAAGAATGGGAACCAGGATAGTAGATCCTCAGCCTCTGATATTTGATCATGCGGCTCAGTTCTTTACAGCCAGTGATCCTCAGTTTGCTGGGTTGGTTCAAGGTTGGTTGGAGCAAGGTCTGGTTCGGGAATGGCAGGGTACAATTGGAGAGCTTGAAGTGGGTGGTCATTTTGTTCCTCTTCCTTCTTCTCCTCCAAGATATATAGGTGTTAATGGAATGCGCCCCATTGCTGACTCGTTACTTTCTCAGACTCGTATGATTAACGTGGAGAGACCTTGCTGGATAAGTAAACTTGAGCCCTTCAATGGGATGTGGCATTTGAGTGAGAATGGAAAACCATGTGGGAAGTTTGATGCTATAGTTATTGCACATAATGGGAAATGTGCAAACCGCTTGCTTGGGTCATCAGGCTTACCACTAATTGCTGGACAAATGAAGAGACTGGAATTGAGTTCTATATGGGCCCTCCTCGCAGCATTTGAGGATCCACTTCAAATTCCCGGTGAAGGAGCATTTCCTTTTGAAGGAGCTTTTGTAAGAGGGGTTGATTCCATCTCATGGATGGCAAATAATACCAAAAAACTACAGGGTTCCCATAGTAATGGTCCTCACTGTTGGACCTTTCTTAGTACTACAGCTTATGCAAAGCGGAACAAGGTTCCACAGGAGAATATACCAAATGCCACAGCAGAGAAGGTGAAGGCAGCCATGCTCTTGGGTGTGGAAGAAGCACTGGGATTACCAAAAGGATCACTTCAGAAACCCTTTTATACTCGAATCCAGTTATGGGGTGCGGCTCTTCCAACAAATACACCTGGTATCCCCTGTATCTTTGATCCTCTTGGAAGGGCTGGTATATGTGGTGATTGGTTACTGGGTTCAAATCTAGAGTCAGCAGCCTTAAGTGGAATCTCTCTTGCTAATCATATGGCAGACTATTTCCAAAGTAGCGGAGGCCGCCCTGAAGAGTTTGCTGTTGGTTTACGCAATGAGTTTCAACCGCTCAGAGGGCATGATATTGGACAGTTTCCAGGGTTGGAGTCTCAAACACAAACGCAGATGCCTACCCAACAATCATACCAACTTGCCACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

479

Amino Acids

52.12

Weight (kDa)

9.08

Isoelectric Point (pI)

41.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013079)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 187
Acc36I ACCTGC 1 cut(s) 187
AccB7I CCANNNNNTGG 1 cut(s) 900
AccBSI CCGCTC 2 cut(s) 303, 1345
AccII CGCG 1 cut(s) 294
AclWI GGATC 6 cut(s) 359, 410, 821, 834, 1099, 1172
AcoI YGGCCR 1 cut(s) 118
AcsI RAATTY 1 cut(s) 837
AcuI CTGAAG 2 cut(s) 1082, 1326
AfaI GTAC 2 cut(s) 481, 973
AfiI CCNNNNNNNGG 9 cut(s) 135, 236, 647, 648, 848, 866, 900, 1129, 1349
AflII CTTAAG 1 cut(s) 1243
AgsI TTSAA 7 cut(s) 440, 497, 646, 836, 866, 1224, 1340
AjnI CCWGG 4 cut(s) 95, 353, 1156, 1372
AluBI AGCT 3 cut(s) 493, 872, 980
AluI AGCT 3 cut(s) 493, 872, 980
Alw21I GWGCWC 1 cut(s) 277
Alw26I GTCTC 4 cut(s) 269, 607, 775, 1389
AlwI GGATC 6 cut(s) 359, 410, 821, 834, 1099, 1172
AlwNI CAGNNNCTG 1 cut(s) 376
AoxI GGCC 3 cut(s) 118, 804, 1297
ApaI GGGCCC 1 cut(s) 808
ApeKI GCWGC 3 cut(s) 815, 1046, 1238
ApoI RAATTY 1 cut(s) 837
ArsI GACNNNNNNTTYG 2 cut(s) 1217, 1249
AspLEI GCGC 1 cut(s) 564
AspS9I GGNCC 4 cut(s) 804, 805, 947, 960
AsuC2I CCSGG 1 cut(s) 843
AsuHPI GGTGA 4 cut(s) 211, 857, 1051, 1217
AvaII GGWCC 2 cut(s) 947, 960
BaeGI GKGCMC 1 cut(s) 808
BalI TGGCCA 1 cut(s) 120
BamHI GGATCC 1 cut(s) 826
BanII GRGCYC 2 cut(s) 642, 808
Bbv12I GWGCWC 1 cut(s) 277
BbvCI CCTCAGC 1 cut(s) 369
BbvI GCAGC 3 cut(s) 827, 1058, 1250
BccI CCATC 3 cut(s) 110, 898, 902
BciT130I CCWGG 4 cut(s) 97, 355, 1158, 1374
BciVI GTATCC 1 cut(s) 1172
BclI TGATCA 1 cut(s) 385
BcnI CCSGG 1 cut(s) 843
BcoDI GTCTC 4 cut(s) 269, 607, 775, 1389
BfaI CTAG 1 cut(s) 1229
BfmI CTRYAG 4 cut(s) 63, 699, 926, 975
BfrI CTTAAG 1 cut(s) 1243
BfuAI ACCTGC 1 cut(s) 187
BfuI GTATCC 1 cut(s) 1172
BisI GCNGC 6 cut(s) 393, 816, 1047, 1137, 1239, 1300
BlsI GCNGC 6 cut(s) 394, 817, 1048, 1138, 1240, 1301
BmcAI AGTACT 1 cut(s) 973
Bme1390I CCNGG 5 cut(s) 97, 355, 843, 1158, 1374
Bme18I GGWCC 2 cut(s) 947, 960
BmgT120I GGNCC 4 cut(s) 804, 805, 947, 960
BmiI GGNNCC 6 cut(s) 140, 352, 806, 828, 934, 1002
BmrFI CCNGG 5 cut(s) 97, 355, 843, 1158, 1374
BmrI ACTGGG 2 cut(s) 1085, 1226
BmsI GCATC 2 cut(s) 685, 1392
BmuI ACTGGG 2 cut(s) 1085, 1226
Bpu10I CCTNAGC 1 cut(s) 369
BpuEI CTTGAG 2 cut(s) 170, 656
BpuMI CCSGG 1 cut(s) 843
BsaI GGTCTC 2 cut(s) 269, 607
BsaJI CCNNGG 3 cut(s) 95, 111, 1373
BsaXI ACNNNNNCTCC 2 cut(s) 861, 891
Bsc4I CCNNNNNNNGG 9 cut(s) 135, 236, 647, 648, 848, 866, 900, 1129, 1349
Bse1I ACTGG 5 cut(s) 411, 789, 1080, 1123, 1221
Bse3DI GCAATG 2 cut(s) 567, 1336
BseBI CCWGG 4 cut(s) 97, 355, 1158, 1374
BseDI CCNNGG 3 cut(s) 95, 111, 1373
BseGI GGATG 3 cut(s) 121, 657, 909
BseLI CCNNNNNNNGG 9 cut(s) 135, 236, 647, 648, 848, 866, 900, 1129, 1349
BseMI GCAATG 2 cut(s) 567, 1336
BseMII CTCAG 5 cut(s) 383, 410, 434, 602, 1360
BseNI ACTGG 5 cut(s) 411, 789, 1080, 1123, 1221
BseRI GAGGAG 2 cut(s) 522, 800
BseSI GKGCMC 1 cut(s) 808
BseXI GCAGC 3 cut(s) 827, 1058, 1250
BseYI CCCAGC 1 cut(s) 428
Bsh1236I CGCG 1 cut(s) 294
BshFI GGCC 3 cut(s) 120, 806, 1299
BsiHKAI GWGCWC 1 cut(s) 277
BsiSI CCGG 1 cut(s) 843
BslI CCNNNNNNNGG 9 cut(s) 135, 236, 647, 648, 848, 866, 900, 1129, 1349
BsmAI GTCTC 4 cut(s) 269, 607, 775, 1389
BsmI GAATGC 1 cut(s) 564
BsnI GGCC 3 cut(s) 120, 806, 1299
Bso31I GGTCTC 2 cut(s) 269, 607
Bsp120I GGGCCC 1 cut(s) 804
Bsp1286I GDGCHC 3 cut(s) 277, 642, 808
Bsp143I GATC 6 cut(s) 364, 385, 415, 826, 1091, 1177
BspANI GGCC 3 cut(s) 120, 806, 1299
BspCNI CTCAG 5 cut(s) 382, 409, 433, 601, 1359
BspFNI CGCG 1 cut(s) 294
BspLI GGNNCC 6 cut(s) 140, 352, 806, 828, 934, 1002
BspMI ACCTGC 1 cut(s) 187
BspPI GGATC 6 cut(s) 359, 410, 821, 834, 1099, 1172
BspQI GCTCTTC 1 cut(s) 1146
BspTI CTTAAG 1 cut(s) 1243
BspTNI GGTCTC 2 cut(s) 269, 607
BsrBI CCGCTC 2 cut(s) 303, 1345
BsrDI GCAATG 2 cut(s) 567, 1336
BsrI ACTGG 5 cut(s) 411, 789, 1080, 1123, 1221
BssECI CCNNGG 3 cut(s) 95, 111, 1373
BssMI GATC 6 cut(s) 364, 385, 415, 826, 1091, 1177
Bst2UI CCWGG 4 cut(s) 97, 355, 1158, 1374
Bst4CI ACNGT 5 cut(s) 112, 143, 310, 956, 1368
Bst6I CTCTTC 5 cut(s) 25, 525, 773, 1146, 1302
BstAFI CTTAAG 1 cut(s) 1243
BstC8I GCNNGC 1 cut(s) 737
BstDEI CTNAG 6 cut(s) 369, 396, 420, 588, 968, 1346
BstDSI CCRYGG 1 cut(s) 111
BstEII GGTNACC 1 cut(s) 199
BstENI CCTNNNNNAGG 1 cut(s) 864
BstF5I GGATG 3 cut(s) 121, 657, 909
BstFNI CGCG 1 cut(s) 294
BstHHI GCGC 1 cut(s) 564
BstKTI GATC 6 cut(s) 367, 388, 418, 829, 1094, 1180
BstMAI GTCTC 4 cut(s) 269, 607, 775, 1389
BstMBI GATC 6 cut(s) 364, 385, 415, 826, 1091, 1177
BstMWI GCNNNNNNNGC 5 cut(s) 266, 300, 812, 1299, 1351
BstNI CCWGG 4 cut(s) 97, 355, 1158, 1374
BstPI GGTNACC 1 cut(s) 199
BstSCI CCNGG 5 cut(s) 95, 353, 841, 1156, 1372
BstSFI CTRYAG 4 cut(s) 63, 699, 926, 975
BstSLI GKGCMC 1 cut(s) 808
BstUI CGCG 1 cut(s) 294
BstV1I GCAGC 3 cut(s) 827, 1058, 1250
BstX2I RGATCY 2 cut(s) 364, 826
BstXI CCANNNNNNTGG 2 cut(s) 944, 1057
BstYI RGATCY 2 cut(s) 364, 826
BsuI GTATCC 1 cut(s) 1172
BsuRI GGCC 3 cut(s) 120, 806, 1299
BtgI CCRYGG 1 cut(s) 111
BtsCI GGATG 3 cut(s) 121, 657, 909
BtsIMutI CAGTG 3 cut(s) 418, 952, 1073
BveI ACCTGC 1 cut(s) 187
Cac8I GCNNGC 1 cut(s) 737
CaiI CAGNNNCTG 1 cut(s) 376
CfoI GCGC 1 cut(s) 564
Cfr13I GGNCC 4 cut(s) 804, 805, 947, 960
CseI GACGC 1 cut(s) 147
CsiI ACCWGGT 1 cut(s) 1156
Csp6I GTAC 2 cut(s) 480, 972
CspCI CAANNNNNGTGG 2 cut(s) 295, 330
CviAII CATG 7 cut(s) 256, 329, 389, 681, 900, 1051, 1355
CviQI GTAC 2 cut(s) 480, 972
DdeI CTNAG 6 cut(s) 369, 396, 420, 588, 968, 1346
DpnI GATC 6 cut(s) 366, 387, 417, 828, 1093, 1179
DpnII GATC 6 cut(s) 364, 385, 415, 826, 1091, 1177
EaeI YGGCCR 1 cut(s) 118
Eam1104I CTCTTC 5 cut(s) 25, 525, 773, 1146, 1302
EarI CTCTTC 5 cut(s) 25, 525, 773, 1146, 1302
EciI GGCGGA 1 cut(s) 264
Eco24I GRGCYC 2 cut(s) 642, 808
Eco31I GGTCTC 2 cut(s) 269, 607
Eco47I GGWCC 2 cut(s) 947, 960
Eco57I CTGAAG 2 cut(s) 1082, 1326
Eco91I GGTNACC 1 cut(s) 199
EcoNI CCTNNNNNAGG 1 cut(s) 864
EcoO109I RGGNCCY 1 cut(s) 805
EcoO65I GGTNACC 1 cut(s) 199
EcoRII CCWGG 4 cut(s) 95, 353, 1156, 1372
EcoT38I GRGCYC 2 cut(s) 642, 808
FaeI CATG 7 cut(s) 259, 332, 392, 684, 903, 1054, 1358
FalI AAGNNNNNCTT 2 cut(s) 1080, 1112
FatI CATG 7 cut(s) 255, 328, 388, 680, 899, 1050, 1354
FauI CCCGC 1 cut(s) 136
FauNDI CATATG 1 cut(s) 1269
FbaI TGATCA 1 cut(s) 385
Fnu4HI GCNGC 6 cut(s) 393, 816, 1047, 1137, 1239, 1300
FokI GGATG 3 cut(s) 128, 664, 916
FriOI GRGCYC 2 cut(s) 642, 808
Fsp4HI GCNGC 6 cut(s) 393, 816, 1047, 1137, 1239, 1300
FspBI CTAG 1 cut(s) 1229
GlaI GCGC 1 cut(s) 563
GluI GCNGC 6 cut(s) 393, 816, 1047, 1137, 1239, 1300
GsaI CCCAGC 1 cut(s) 432
HaeIII GGCC 3 cut(s) 120, 806, 1299
HapII CCGG 1 cut(s) 843
HgaI GACGC 1 cut(s) 147
HhaI GCGC 1 cut(s) 564
Hin1II CATG 7 cut(s) 259, 332, 392, 684, 903, 1054, 1358
Hin6I GCGC 1 cut(s) 562
HinP1I GCGC 1 cut(s) 562
HinfI GANTC 7 cut(s) 575, 592, 890, 1119, 1232, 1251, 1382
HpaII CCGG 1 cut(s) 843
HphI GGTGA 4 cut(s) 211, 857, 1051, 1217
Hpy166II GTNNAC 2 cut(s) 632, 1325
Hpy188I TCNGA 5 cut(s) 177, 378, 591, 1101, 1349
Hpy188III TCNNGA 4 cut(s) 162, 284, 467, 1229
Hpy8I GTNNAC 2 cut(s) 632, 1325
HpyAV CCTTC 9 cut(s) 159, 214, 534, 652, 842, 860, 1030, 1036, 1182
HpyCH4III ACNGT 5 cut(s) 112, 143, 310, 956, 1368
HpyCH4IV ACGT 1 cut(s) 606
HpyCH4V TGCA 3 cut(s) 710, 728, 986
HpyF10VI GCNNNNNNNGC 5 cut(s) 266, 300, 812, 1299, 1351
HpyF3I CTNAG 6 cut(s) 369, 396, 420, 588, 968, 1346
HpySE526I ACGT 1 cut(s) 606
Hsp92II CATG 7 cut(s) 259, 332, 392, 684, 903, 1054, 1358
HspAI GCGC 1 cut(s) 562
Ksp22I TGATCA 1 cut(s) 385
Kzo9I GATC 6 cut(s) 364, 385, 415, 826, 1091, 1177
LguI GCTCTTC 1 cut(s) 1146
LmnI GCTCC 4 cut(s) 308, 451, 851, 869
Lsp1109I GCAGC 3 cut(s) 827, 1058, 1250
LweI GCATC 2 cut(s) 685, 1392
MabI ACCWGGT 1 cut(s) 1156
MaeI CTAG 1 cut(s) 1229
MaeII ACGT 1 cut(s) 606
MaeIII GTNAC 3 cut(s) 199, 579, 1212
MalI GATC 6 cut(s) 366, 387, 417, 828, 1093, 1179
MbiI CCGCTC 2 cut(s) 303, 1345
MboI GATC 6 cut(s) 364, 385, 415, 826, 1091, 1177
MboII GAAGA 8 cut(s) 12, 354, 512, 519, 790, 1079, 1133, 1319
MfeI CAATTG 1 cut(s) 483
MflI RGATCY 2 cut(s) 364, 826
MhlI GDGCHC 3 cut(s) 277, 642, 808
MlsI TGGCCA 1 cut(s) 120
MluCI AATT 5 cut(s) 171, 483, 762, 788, 837
MluNI TGGCCA 1 cut(s) 120
MlyI GAGTC 4 cut(s) 569, 586, 1241, 1391
MmeI TCCRAC 5 cut(s) 58, 429, 938, 1169, 1359
Mox20I TGGCCA 1 cut(s) 120
MscI TGGCCA 1 cut(s) 120
MseI TTAA 4 cut(s) 552, 603, 1244, 1435
MslI CAYNNNNRTG 2 cut(s) 663, 942
Msp20I TGGCCA 1 cut(s) 120
MspCI CTTAAG 1 cut(s) 1243
MspI CCGG 1 cut(s) 843
MspR9I CCNGG 5 cut(s) 97, 355, 843, 1158, 1374
MunI CAATTG 1 cut(s) 483
Mva1269I GAATGC 1 cut(s) 564
MvaI CCWGG 4 cut(s) 97, 355, 1158, 1374
MvnI CGCG 1 cut(s) 294
MwoI GCNNNNNNNGC 5 cut(s) 266, 300, 812, 1299, 1351
NciI CCSGG 1 cut(s) 843
NdeI CATATG 1 cut(s) 1269
NdeII GATC 6 cut(s) 364, 385, 415, 826, 1091, 1177
NlaIII CATG 7 cut(s) 259, 332, 392, 684, 903, 1054, 1358
NlaIV GGNNCC 6 cut(s) 140, 352, 806, 828, 934, 1002
NmuCI GTSAC 1 cut(s) 199
PaqCI CACCTGC 1 cut(s) 187
PciSI GCTCTTC 1 cut(s) 1146
PctI GAATGC 1 cut(s) 564
PfeI GAWTC 3 cut(s) 890, 1119, 1251
PflMI CCANNNNNTGG 1 cut(s) 900
PkrI GCNGC 6 cut(s) 394, 817, 1048, 1138, 1240, 1301
PleI GAGTC 4 cut(s) 569, 586, 1240, 1390
PpsI GAGTC 4 cut(s) 569, 586, 1240, 1390
Psp6I CCWGG 4 cut(s) 95, 353, 1156, 1372
PspEI GGTNACC 1 cut(s) 199
PspFI CCCAGC 1 cut(s) 428
PspGI CCWGG 4 cut(s) 95, 353, 1156, 1372
PspN4I GGNNCC 6 cut(s) 140, 352, 806, 828, 934, 1002
PspOMI GGGCCC 1 cut(s) 804
PspPI GGNCC 4 cut(s) 804, 805, 947, 960
PstNI CAGNNNCTG 1 cut(s) 376
PsuI RGATCY 2 cut(s) 364, 826
RsaI GTAC 2 cut(s) 481, 973
RsaNI GTAC 2 cut(s) 480, 972
RseI CAYNNNNRTG 2 cut(s) 663, 942
SapI GCTCTTC 1 cut(s) 1146
SaqAI TTAA 4 cut(s) 552, 603, 1244, 1435
SatI GCNGC 6 cut(s) 393, 816, 1047, 1137, 1239, 1300
Sau3AI GATC 6 cut(s) 364, 385, 415, 826, 1091, 1177
Sau96I GGNCC 4 cut(s) 804, 805, 947, 960
ScaI AGTACT 1 cut(s) 973
SchI GAGTC 4 cut(s) 569, 586, 1241, 1391
ScrFI CCNGG 5 cut(s) 97, 355, 843, 1158, 1374
SduI GDGCHC 3 cut(s) 277, 642, 808
SexAI ACCWGGT 1 cut(s) 1156
SfaNI GCATC 2 cut(s) 685, 1392
SfcI CTRYAG 4 cut(s) 63, 699, 926, 975
SinI GGWCC 2 cut(s) 947, 960
SmiMI CAYNNNNRTG 2 cut(s) 663, 942
SmlI CTYRAG 3 cut(s) 185, 635, 1243
SmoI CTYRAG 3 cut(s) 185, 635, 1243
Sse9I AATT 5 cut(s) 171, 483, 762, 788, 837
SspMI CTAG 1 cut(s) 1229
StyD4I CCNGG 5 cut(s) 95, 353, 841, 1156, 1372
TaaI ACNGT 5 cut(s) 112, 143, 310, 956, 1368
TaiI ACGT 1 cut(s) 609
TaqI TCGA 1 cut(s) 1117
TasI AATT 5 cut(s) 171, 483, 762, 788, 837
TatI WGTACW 1 cut(s) 971
TauI GCSGC 3 cut(s) 395, 1139, 1302
TfiI GAWTC 3 cut(s) 890, 1119, 1251
Tru1I TTAA 4 cut(s) 552, 603, 1244, 1435
Tru9I TTAA 4 cut(s) 552, 603, 1244, 1435
TscAI CASTG 3 cut(s) 418, 959, 1080
TseFI GTSAC 1 cut(s) 199
TseI GCWGC 3 cut(s) 815, 1046, 1238
Tsp45I GTSAC 1 cut(s) 199
TspDTI ATGAA 2 cut(s) 317, 791
TspRI CASTG 3 cut(s) 418, 959, 1080
Van91I CCANNNNNTGG 1 cut(s) 900
Vha464I CTTAAG 1 cut(s) 1243
VpaK11BI GGWCC 2 cut(s) 947, 960
XagI CCTNNNNNAGG 1 cut(s) 864
XapI RAATTY 1 cut(s) 837
XbaI TCTAGA 1 cut(s) 1228
XcmI CCANNNNNNNNNTGG 1 cut(s) 901
XspI CTAG 1 cut(s) 1229
ZrmI AGTACT 1 cut(s) 973
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.