RLG00000007683

NAD(P)-binding Rossmann-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0013079
Physical Location & Seq
Reverse (-)
19823411 .. 19827935
4525 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007683

Sequence Viewer

Length: 1764 bp
ATGCTCTGCTCCTTTCACTCTTCTCTCATCCTTAAACCCCTGCTCAAAACCCATAAACCTTTAACCATAACCTTATCTTCCCAACCCAGAAAAAGACCCACCTTTGATGGTGAGCAAAGCCCAAAACCCACCTCGAGAAACCGACACAAACGCTCCTATGGAGCCTCAAGAAGGTCAATCTTGAAGACCCTTAAGCAGGAGCAAGTGACTTTCACTACTCCAGTCCCTGATGACCCCATTGTGGGCATTATCGGCGGAGGCATGGCCGGTCTTACTTGTGCTCTCTATTTAGAAAAACGCGGCGTCCGCTCCACCGTTTTCGACACGGGGGTTCATGGCCTGGGAGGAAGAATGGGAACGCGGATAATAGATCCTCAGCCTTTGATATTTGATCATGCAGCTCAGTTCTTTACGGCCAACAATCCTCTGTTTGTTGAGTTGGTTCAAGGTTGGATGGAGCAAGGTCTGGTTCGAGAATGGCAGGGTACAATAGGTGAGCTTGAAGTGGGTGGTAAATTTGTGGCACTATCTTCTTCTCCTCCAAGGTATATTGGTGTTAATGGAATGCGCCCTGTTGCTGACTCACTATTGTCTCAGAGTTCTATGATTAATGTGGAGAGACCGACCTGGATCAGTAAACTGGAGCCATTTAATGGGACGTGGTACTTGAGTGAGAATGGAAAACCTCGTGGGCAGTTCGATGCCATTGTTATTGCACATAATGGTAAATGTGCAAACCGTTTGCTTGGTTCGTCAGGCTTACCACTAATTGCAGGACAGATGAAGAGGCTGGAATTGAGTTCTGTATGGGCTCTCCTTGCCGCATTTGAGGATCCACTTCAAATCCCCGGTACCGACATATTTCCTTTTGAAGGAGCTTTTGTAAAAGGGGTTGATTCCATCTCCTGGATGGCAAATAATTCCAAAAAACTCCTAGGCTCCCAGAGTGGTGGCCCTCACTGTTGGACCTTTCTCAGTACTGCAGCTTATGGAAAGCGAAACAAGGTTCCACAGGAGAATATACCAACTGCCACAAAAGAGAAGGTGACAGCAGGCATGCTTATGGGCGTTGAAGAGGCACTTGGATTACCAAAAGGATCACTTGAGACGCCATTTTATACCCGACTCCAGTTATGGGGTGCGGCTCTTCCAACTAATACGCCTGGTATCCCCTGCATCTTTGATCCTCACGGAAGGGCTGGTATATGCGGTGATTGGTTACTCGGTTCAAATTTAGAATCAGCAGCCATAAGCGGAATGGCTCTTGCAAATCATATGGCGGACTATTTCCAAAGCGGTGGAGACCGTCCCGAAGAGTTTTCTGTTGGTTTACGCAGCGAATTTCAGCGACTTAAAGGACATGATATAGGCCAATTTCCAGGAGAAAACCACAAGAACACCAATACTTCTGTAACTAGAAGCTTCAGCCTTCAAGACGACCCAAGGTTTGTGATAAATGAGTGGCGGCGATCAAGGCCATTGCCATGGTGGCCATCATTTGGACGGCCAGGTTCTGTGGCTGCAGATGTGAATGCTGAGAGGAAGCTTCAGTGGAGTCTAAGAAGAGAGCTGCAGGTTCATCTTGGAGACCGAGATCCATCTGTTGTTGTTCATGTGGCCACCTCGCTCTTCATTGCAAGCCTTGAAAAGAAGCATTGTGTCTCTTCAGGGAAACGTAATGTACTAGATAACTTCCTTGAGCCATTGCGCCCTTTCCTCTTCGATCGAACTGATATGTTTTGGCATGAACCAAGGTGGTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAD_binding_8

Protein Analysis

588

Amino Acids

64.92

Weight (kDa)

9.33

Isoelectric Point (pI)

46.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_8 PF13450 83 - 144 1.3e-11 NAD(P)-binding Rossmann-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04650
fragaria_vesca FvH4_4g17540
malus_domestica MD04G1226700.v1.1
prunus_persica Prupe.6G345400_v2.0.a1 Prupe.6G345400_v2.0.a1 Prupe.6G345400_v2.0.a1 Prupe.6G345400_v2.0.a1
pyrus_communis pycom04g19990
rosa_chinensis RchiOBHm_Chr4g0421451
rosa_laevigata RLG00000007683
rosa_multiflora Rmu_sc0001962.1_g000014
rosa_roxburghii Rroxscaffold_5G00363720
rosa_rugosa Rorug04G0171300
rosa_samantha Rh4AG232000 Rh4BG234900 Rh4CG246500 Rh4DG230500
rosa_wichuraiana Rw4G020210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1564
Acc65I GGTACC 1 cut(s) 851
AccB1I GGYRCC 1 cut(s) 851
AccB7I CCANNNNNTGG 3 cut(s) 653, 906, 1499
AccBSI CCGCTC 1 cut(s) 309
AccII CGCG 2 cut(s) 300, 361
AclWI GGATC 7 cut(s) 365, 638, 827, 840, 1105, 1178, 1589
AcoI YGGCCR 5 cut(s) 264, 414, 1490, 1505, 1617
AcsI RAATTY 3 cut(s) 515, 1231, 1340
AcuI CTGAAG 3 cut(s) 1408, 1532, 1650
AcyI GRCGYC 2 cut(s) 303, 1109
AfaI GTAC 5 cut(s) 487, 665, 853, 979, 1683
AfiI CCNNNNNNNGG 9 cut(s) 171, 196, 241, 242, 653, 872, 906, 1135, 1499
AflII CTTAAG 1 cut(s) 191
AgsI TTSAA 9 cut(s) 184, 446, 503, 842, 872, 1073, 1230, 1433, 1646
AjiI CACGTC 1 cut(s) 660
AjnI CCWGG 6 cut(s) 339, 626, 905, 1162, 1378, 1507
AjuI GAANNNNNNNTTGG 2 cut(s) 1065, 1097
AluBI AGCT 7 cut(s) 401, 499, 878, 986, 1422, 1546, 1570
AluI AGCT 7 cut(s) 401, 499, 878, 986, 1422, 1546, 1570
Alw21I GWGCWC 1 cut(s) 283
Alw26I GTCTC 6 cut(s) 597, 613, 1100, 1296, 1581, 1666
AlwI GGATC 7 cut(s) 365, 638, 827, 840, 1105, 1178, 1589
AlwNI CAGNNNCTG 2 cut(s) 227, 1514
Ama87I CYCGRG 1 cut(s) 133
AoxI GGCC 9 cut(s) 264, 337, 414, 952, 1369, 1475, 1490, 1505, 1617
ApeKI GCWGC 6 cut(s) 398, 983, 1244, 1335, 1520, 1570
ApoI RAATTY 3 cut(s) 515, 1231, 1340
ArsI GACNNNNNNTTYG 2 cut(s) 1430, 1462
AseI ATTAAT 1 cut(s) 609
Asp718I GGTACC 1 cut(s) 851
AspA2I CCTAGG 1 cut(s) 934
AspLEI GCGC 2 cut(s) 570, 1710
AspS9I GGNCC 3 cut(s) 953, 966, 1758
AsuC2I CCSGG 1 cut(s) 849
AsuHPI GGTGA 4 cut(s) 122, 506, 1057, 1223
AvaI CYCGRG 1 cut(s) 133
AvaII GGWCC 2 cut(s) 966, 1758
AvrII CCTAGG 1 cut(s) 934
BaeI ACNNNNGTAYC 2 cut(s) 655, 688
BalI TGGCCA 2 cut(s) 1492, 1619
BamHI GGATCC 1 cut(s) 832
BanI GGYRCC 1 cut(s) 851
BanII GRGCYC 1 cut(s) 814
BauI CACGAG 1 cut(s) 687
BbsI GAAGAC 1 cut(s) 191
Bbv12I GWGCWC 1 cut(s) 283
BbvCI CCTCAGC 1 cut(s) 375
BbvI GCAGC 6 cut(s) 410, 995, 1256, 1347, 1507, 1557
BccI CCATC 6 cut(s) 101, 448, 904, 908, 1501, 1606
BceAI ACGGC 2 cut(s) 429, 1520
BciT130I CCWGG 6 cut(s) 341, 628, 907, 1164, 1380, 1509
BciVI GTATCC 1 cut(s) 1178
BclI TGATCA 1 cut(s) 391
BcnI CCSGG 1 cut(s) 849
BcoDI GTCTC 6 cut(s) 597, 613, 1100, 1296, 1581, 1666
BfaI CTAG 3 cut(s) 935, 1416, 1685
BfmI CTRYAG 3 cut(s) 981, 1521, 1571
BfrI CTTAAG 1 cut(s) 191
BfuAI ACCTGC 1 cut(s) 1564
BfuI GTATCC 1 cut(s) 1178
BglI GCCNNNNNGGC 1 cut(s) 1489
BlnI CCTAGG 1 cut(s) 934
BmcAI AGTACT 1 cut(s) 979
Bme1390I CCNGG 7 cut(s) 341, 628, 849, 907, 1164, 1380, 1509
Bme18I GGWCC 2 cut(s) 966, 1758
BmeT110I CYCGRG 1 cut(s) 133
BmgBI CACGTC 1 cut(s) 660
BmgT120I GGNCC 3 cut(s) 953, 966, 1758
BmiI GGNNCC 6 cut(s) 163, 645, 834, 853, 940, 1008
BmrFI CCNGG 7 cut(s) 341, 628, 849, 907, 1164, 1380, 1509
BmsI GCATC 2 cut(s) 691, 1185
BpiI GAAGAC 1 cut(s) 191
BpmI CTGGAG 3 cut(s) 204, 662, 1112
Bpu10I CCTNAGC 1 cut(s) 375
BpuEI CTTGAG 4 cut(s) 151, 688, 1124, 1718
BpuMI CCSGG 1 cut(s) 849
BsaHI GRCGYC 2 cut(s) 303, 1109
BsaI GGTCTC 3 cut(s) 613, 1296, 1581
BsaJI CCNNGG 7 cut(s) 340, 542, 847, 934, 1442, 1484, 1751
BsaXI ACNNNNNCTCC 4 cut(s) 137, 167, 867, 897
Bsc4I CCNNNNNNNGG 9 cut(s) 171, 196, 241, 242, 653, 872, 906, 1135, 1499
Bse118I RCCGGY 1 cut(s) 266
Bse1I ACTGG 3 cut(s) 221, 645, 1129
Bse3DI GCAATG 3 cut(s) 1478, 1632, 1703
BseBI CCWGG 6 cut(s) 341, 628, 907, 1164, 1380, 1509
BseDI CCNNGG 7 cut(s) 340, 542, 847, 934, 1442, 1484, 1751
BseGI GGATG 3 cut(s) 27, 459, 915
BseLI CCNNNNNNNGG 9 cut(s) 171, 196, 241, 242, 653, 872, 906, 1135, 1499
BseMI GCAATG 3 cut(s) 1478, 1632, 1703
BseMII CTCAG 5 cut(s) 389, 416, 608, 988, 1527
BseNI ACTGG 3 cut(s) 221, 645, 1129
BseRI GAGGAG 1 cut(s) 528
BseXI GCAGC 6 cut(s) 410, 995, 1256, 1347, 1507, 1557
Bsh1236I CGCG 2 cut(s) 300, 361
Bsh1285I CGRYCG 1 cut(s) 1726
BshFI GGCC 9 cut(s) 266, 339, 416, 954, 1371, 1477, 1492, 1507, 1619
BshNI GGYRCC 1 cut(s) 851
BsiEI CGRYCG 1 cut(s) 1726
BsiHKAI GWGCWC 1 cut(s) 283
BsiHKCI CYCGRG 1 cut(s) 133
BsiSI CCGG 2 cut(s) 267, 849
BslFI GGGAC 3 cut(s) 209, 670, 1293
BslI CCNNNNNNNGG 9 cut(s) 171, 196, 241, 242, 653, 872, 906, 1135, 1499
BsmAI GTCTC 6 cut(s) 597, 613, 1100, 1296, 1581, 1666
BsmBI CGTCTC 1 cut(s) 1100
BsmFI GGGAC 3 cut(s) 209, 670, 1293
BsmI GAATGC 2 cut(s) 570, 1537
BsnI GGCC 9 cut(s) 266, 339, 416, 954, 1371, 1477, 1492, 1507, 1619
Bso31I GGTCTC 3 cut(s) 613, 1296, 1581
BsoBI CYCGRG 1 cut(s) 133
Bsp1286I GDGCHC 2 cut(s) 283, 814
Bsp143I GATC 9 cut(s) 370, 391, 630, 832, 1097, 1183, 1469, 1594, 1723
Bsp19I CCATGG 1 cut(s) 1484
BspANI GGCC 9 cut(s) 266, 339, 416, 954, 1371, 1477, 1492, 1507, 1619
BspCNI CTCAG 5 cut(s) 388, 415, 607, 987, 1528
BspFNI CGCG 2 cut(s) 300, 361
BspLI GGNNCC 6 cut(s) 163, 645, 834, 853, 940, 1008
BspMAI CTGCAG 3 cut(s) 985, 1525, 1575
BspMI ACCTGC 1 cut(s) 1564
BspPI GGATC 7 cut(s) 365, 638, 827, 840, 1105, 1178, 1589
BspQI GCTCTTC 2 cut(s) 1152, 1634
BspT107I GGYRCC 1 cut(s) 851
BspTI CTTAAG 1 cut(s) 191
BspTNI GGTCTC 3 cut(s) 613, 1296, 1581
BsrBI CCGCTC 1 cut(s) 309
BsrDI GCAATG 3 cut(s) 1478, 1632, 1703
BsrFI RCCGGY 1 cut(s) 266
BsrI ACTGG 3 cut(s) 221, 645, 1129
BssAI RCCGGY 1 cut(s) 266
BssECI CCNNGG 7 cut(s) 340, 542, 847, 934, 1442, 1484, 1751
BssMI GATC 9 cut(s) 370, 391, 630, 832, 1097, 1183, 1469, 1594, 1723
BssNI GRCGYC 2 cut(s) 303, 1109
BssSI CACGAG 1 cut(s) 687
BssT1I CCWWGG 5 cut(s) 542, 934, 1442, 1484, 1751
Bst2BI CACGAG 1 cut(s) 687
Bst2UI CCWGG 6 cut(s) 341, 628, 907, 1164, 1380, 1509
Bst4CI ACNGT 4 cut(s) 316, 740, 962, 1307
Bst6I CTCTTC 9 cut(s) 25, 779, 1068, 1152, 1308, 1558, 1634, 1669, 1724
BstACI GRCGYC 2 cut(s) 303, 1109
BstAFI CTTAAG 1 cut(s) 191
BstC8I GCNNGC 3 cut(s) 1054, 1058, 1639
BstDEI CTNAG 6 cut(s) 375, 402, 594, 974, 1536, 1559
BstDSI CCRYGG 1 cut(s) 1484
BstENI CCTNNNNNAGG 3 cut(s) 169, 194, 870
BstF5I GGATG 3 cut(s) 27, 459, 915
BstFNI CGCG 2 cut(s) 300, 361
BstHHI GCGC 2 cut(s) 570, 1710
BstKTI GATC 9 cut(s) 373, 394, 633, 835, 1100, 1186, 1472, 1597, 1726
BstMAI GTCTC 6 cut(s) 597, 613, 1100, 1296, 1581, 1666
BstMBI GATC 9 cut(s) 370, 391, 630, 832, 1097, 1183, 1469, 1594, 1723
BstMCI CGRYCG 1 cut(s) 1726
BstMWI GCNNNNNNNGC 5 cut(s) 252, 306, 818, 1474, 1489
BstNI CCWGG 6 cut(s) 341, 628, 907, 1164, 1380, 1509
BstNSI RCATGY 1 cut(s) 1060
BstSCI CCNGG 7 cut(s) 339, 626, 847, 905, 1162, 1378, 1507
BstSFI CTRYAG 3 cut(s) 981, 1521, 1571
BstUI CGCG 2 cut(s) 300, 361
BstV1I GCAGC 6 cut(s) 410, 995, 1256, 1347, 1507, 1557
BstV2I GAAGAC 1 cut(s) 191
BstX2I RGATCY 3 cut(s) 370, 832, 1594
BstXI CCANNNNNNTGG 3 cut(s) 950, 1298, 1485
BstYI RGATCY 3 cut(s) 370, 832, 1594
BsuI GTATCC 1 cut(s) 1178
BsuRI GGCC 9 cut(s) 266, 339, 416, 954, 1371, 1477, 1492, 1507, 1619
BtgI CCRYGG 1 cut(s) 1484
BtrI CACGTC 1 cut(s) 660
BtsCI GGATG 3 cut(s) 27, 459, 915
BtsIMutI CAGTG 2 cut(s) 958, 1556
BveI ACCTGC 1 cut(s) 1564
Cac8I GCNNGC 3 cut(s) 1054, 1058, 1639
CaiI CAGNNNCTG 2 cut(s) 227, 1514
CfoI GCGC 2 cut(s) 570, 1710
Cfr10I RCCGGY 1 cut(s) 266
Cfr13I GGNCC 3 cut(s) 953, 966, 1758
CseI GACGC 2 cut(s) 292, 1117
Csp6I GTAC 5 cut(s) 486, 664, 852, 978, 1682
CviAII CATG 8 cut(s) 262, 335, 395, 1057, 1361, 1485, 1613, 1745
CviQI GTAC 5 cut(s) 486, 664, 852, 978, 1682
DdeI CTNAG 6 cut(s) 375, 402, 594, 974, 1536, 1559
DpnI GATC 9 cut(s) 372, 393, 632, 834, 1099, 1185, 1471, 1596, 1725
DpnII GATC 9 cut(s) 370, 391, 630, 832, 1097, 1183, 1469, 1594, 1723
EaeI YGGCCR 5 cut(s) 264, 414, 1490, 1505, 1617
Eam1104I CTCTTC 9 cut(s) 25, 779, 1068, 1152, 1308, 1558, 1634, 1669, 1724
EarI CTCTTC 9 cut(s) 25, 779, 1068, 1152, 1308, 1558, 1634, 1669, 1724
EciI GGCGGA 2 cut(s) 270, 1295
Eco130I CCWWGG 5 cut(s) 542, 934, 1442, 1484, 1751
Eco24I GRGCYC 1 cut(s) 814
Eco31I GGTCTC 3 cut(s) 613, 1296, 1581
Eco47I GGWCC 2 cut(s) 966, 1758
Eco57I CTGAAG 3 cut(s) 1408, 1532, 1650
Eco88I CYCGRG 1 cut(s) 133
EcoNI CCTNNNNNAGG 3 cut(s) 169, 194, 870
EcoRII CCWGG 6 cut(s) 339, 626, 905, 1162, 1378, 1507
EcoT14I CCWWGG 5 cut(s) 542, 934, 1442, 1484, 1751
EcoT38I GRGCYC 1 cut(s) 814
ErhI CCWWGG 5 cut(s) 542, 934, 1442, 1484, 1751
Esp3I CGTCTC 1 cut(s) 1100
FaeI CATG 8 cut(s) 265, 338, 398, 1060, 1364, 1488, 1616, 1748
FalI AAGNNNNNCTT 4 cut(s) 1065, 1097, 1086, 1118
FaqI GGGAC 3 cut(s) 209, 670, 1293
FatI CATG 8 cut(s) 261, 334, 394, 1056, 1360, 1484, 1612, 1744
FauNDI CATATG 1 cut(s) 1275
FbaI TGATCA 1 cut(s) 391
FokI GGATG 3 cut(s) 14, 466, 922
FriOI GRGCYC 1 cut(s) 814
FspBI CTAG 3 cut(s) 935, 1416, 1685
GlaI GCGC 2 cut(s) 569, 1709
GsuI CTGGAG 3 cut(s) 204, 662, 1112
HaeIII GGCC 9 cut(s) 266, 339, 416, 954, 1371, 1477, 1492, 1507, 1619
HapII CCGG 2 cut(s) 267, 849
HgaI GACGC 2 cut(s) 292, 1117
HhaI GCGC 2 cut(s) 570, 1710
Hin1I GRCGYC 2 cut(s) 303, 1109
Hin1II CATG 8 cut(s) 265, 338, 398, 1060, 1364, 1488, 1616, 1748
Hin6I GCGC 2 cut(s) 568, 1708
HinP1I GCGC 2 cut(s) 568, 1708
HindIII AAGCTT 2 cut(s) 1420, 1544
HinfI GANTC 5 cut(s) 581, 896, 1125, 1238, 1555
HpaII CCGG 2 cut(s) 267, 849
HphI GGTGA 4 cut(s) 122, 506, 1057, 1223
Hpy166II GTNNAC 2 cut(s) 638, 1331
Hpy188I TCNGA 1 cut(s) 597
Hpy188III TCNNGA 6 cut(s) 135, 168, 181, 473, 1310, 1433
Hpy8I GTNNAC 2 cut(s) 638, 1331
HpyAV CCTTC 5 cut(s) 165, 866, 1036, 1188, 1439
HpyCH4III ACNGT 4 cut(s) 316, 740, 962, 1307
HpyCH4IV ACGT 2 cut(s) 659, 1675
HpyF10VI GCNNNNNNNGC 5 cut(s) 252, 306, 818, 1474, 1489
HpyF3I CTNAG 6 cut(s) 375, 402, 594, 974, 1536, 1559
HpySE526I ACGT 2 cut(s) 659, 1675
Hsp92I GRCGYC 2 cut(s) 303, 1109
Hsp92II CATG 8 cut(s) 265, 338, 398, 1060, 1364, 1488, 1616, 1748
HspAI GCGC 2 cut(s) 568, 1708
KpnI GGTACC 1 cut(s) 855
Ksp22I TGATCA 1 cut(s) 391
Kzo9I GATC 9 cut(s) 370, 391, 630, 832, 1097, 1183, 1469, 1594, 1723
LguI GCTCTTC 2 cut(s) 1152, 1634
LmnI GCTCC 9 cut(s) 14, 158, 161, 199, 314, 457, 643, 875, 944
Lsp1109I GCAGC 6 cut(s) 410, 995, 1256, 1347, 1507, 1557
LweI GCATC 2 cut(s) 691, 1185
MaeI CTAG 3 cut(s) 935, 1416, 1685
MaeII ACGT 2 cut(s) 659, 1675
MaeIII GTNAC 4 cut(s) 205, 1045, 1218, 1411
MalI GATC 9 cut(s) 372, 393, 632, 834, 1099, 1185, 1471, 1596, 1725
MbiI CCGCTC 1 cut(s) 309
MboI GATC 9 cut(s) 370, 391, 630, 832, 1097, 1183, 1469, 1594, 1723
MflI RGATCY 3 cut(s) 370, 832, 1594
MhlI GDGCHC 2 cut(s) 283, 814
MlsI TGGCCA 2 cut(s) 1492, 1619
MluCI AATT 7 cut(s) 515, 768, 794, 919, 1231, 1340, 1373
MluNI TGGCCA 2 cut(s) 1492, 1619
MlyI GAGTC 3 cut(s) 575, 1119, 1564
MmeI TCCRAC 3 cut(s) 431, 944, 1175
Mox20I TGGCCA 2 cut(s) 1492, 1619
MscI TGGCCA 2 cut(s) 1492, 1619
MseI TTAA 7 cut(s) 33, 62, 192, 558, 609, 651, 1353
MslI CAYNNNNRTG 2 cut(s) 1061, 1483
Msp20I TGGCCA 2 cut(s) 1492, 1619
MspCI CTTAAG 1 cut(s) 191
MspI CCGG 2 cut(s) 267, 849
MspR9I CCNGG 7 cut(s) 341, 628, 849, 907, 1164, 1380, 1509
Mva1269I GAATGC 2 cut(s) 570, 1537
MvaI CCWGG 6 cut(s) 341, 628, 907, 1164, 1380, 1509
MvnI CGCG 2 cut(s) 300, 361
MwoI GCNNNNNNNGC 5 cut(s) 252, 306, 818, 1474, 1489
NciI CCSGG 1 cut(s) 849
NcoI CCATGG 1 cut(s) 1484
NdeI CATATG 1 cut(s) 1275
NdeII GATC 9 cut(s) 370, 391, 630, 832, 1097, 1183, 1469, 1594, 1723
NlaIII CATG 8 cut(s) 265, 338, 398, 1060, 1364, 1488, 1616, 1748
NlaIV GGNNCC 6 cut(s) 163, 645, 834, 853, 940, 1008
NmuCI GTSAC 2 cut(s) 205, 1045
NspI RCATGY 1 cut(s) 1060
PaeI GCATGC 1 cut(s) 1060
PaeR7I CTCGAG 1 cut(s) 133
PciSI GCTCTTC 2 cut(s) 1152, 1634
PctI GAATGC 2 cut(s) 570, 1537
PfeI GAWTC 2 cut(s) 896, 1238
PflMI CCANNNNNTGG 3 cut(s) 653, 906, 1499
PfoI TCCNGGA 2 cut(s) 905, 1378
Ple19I CGATCG 1 cut(s) 1726
PleI GAGTC 3 cut(s) 575, 1119, 1563
PpsI GAGTC 3 cut(s) 575, 1119, 1563
PshBI ATTAAT 1 cut(s) 609
Psp6I CCWGG 6 cut(s) 339, 626, 905, 1162, 1378, 1507
PspGI CCWGG 6 cut(s) 339, 626, 905, 1162, 1378, 1507
PspN4I GGNNCC 6 cut(s) 163, 645, 834, 853, 940, 1008
PspPI GGNCC 3 cut(s) 953, 966, 1758
PstI CTGCAG 3 cut(s) 985, 1525, 1575
PstNI CAGNNNCTG 2 cut(s) 227, 1514
PsuI RGATCY 3 cut(s) 370, 832, 1594
PvuI CGATCG 1 cut(s) 1726
RsaI GTAC 5 cut(s) 487, 665, 853, 979, 1683
RsaNI GTAC 5 cut(s) 486, 664, 852, 978, 1682
RseI CAYNNNNRTG 2 cut(s) 1061, 1483
SapI GCTCTTC 2 cut(s) 1152, 1634
SaqAI TTAA 7 cut(s) 33, 62, 192, 558, 609, 651, 1353
Sau3AI GATC 9 cut(s) 370, 391, 630, 832, 1097, 1183, 1469, 1594, 1723
Sau96I GGNCC 3 cut(s) 953, 966, 1758
ScaI AGTACT 1 cut(s) 979
SchI GAGTC 3 cut(s) 575, 1119, 1564
ScrFI CCNGG 7 cut(s) 341, 628, 849, 907, 1164, 1380, 1509
SduI GDGCHC 2 cut(s) 283, 814
SfaNI GCATC 2 cut(s) 691, 1185
SfcI CTRYAG 3 cut(s) 981, 1521, 1571
Sfr274I CTCGAG 1 cut(s) 133
SinI GGWCC 2 cut(s) 966, 1758
SlaI CTCGAG 1 cut(s) 133
SmiMI CAYNNNNRTG 2 cut(s) 1061, 1483
SmlI CTYRAG 6 cut(s) 133, 166, 191, 667, 1103, 1697
SmoI CTYRAG 6 cut(s) 133, 166, 191, 667, 1103, 1697
SphI GCATGC 1 cut(s) 1060
Sse9I AATT 7 cut(s) 515, 768, 794, 919, 1231, 1340, 1373
SspMI CTAG 3 cut(s) 935, 1416, 1685
StyD4I CCNGG 7 cut(s) 339, 626, 847, 905, 1162, 1378, 1507
StyI CCWWGG 5 cut(s) 542, 934, 1442, 1484, 1751
TaaI ACNGT 4 cut(s) 316, 740, 962, 1307
TaiI ACGT 2 cut(s) 662, 1678
TaqI TCGA 6 cut(s) 134, 321, 472, 699, 1722, 1726
TaqII GACCGA 2 cut(s) 637, 1605
TasI AATT 7 cut(s) 515, 768, 794, 919, 1231, 1340, 1373
TatI WGTACW 2 cut(s) 977, 1681
TauI GCSGC 4 cut(s) 303, 824, 1145, 1468
TfiI GAWTC 2 cut(s) 896, 1238
Tru1I TTAA 7 cut(s) 33, 62, 192, 558, 609, 651, 1353
Tru9I TTAA 7 cut(s) 33, 62, 192, 558, 609, 651, 1353
TscAI CASTG 2 cut(s) 965, 1556
TseFI GTSAC 2 cut(s) 205, 1045
TseI GCWGC 6 cut(s) 398, 983, 1244, 1335, 1520, 1570
Tsp45I GTSAC 2 cut(s) 205, 1045
TspDTI ATGAA 6 cut(s) 323, 797, 1568, 1601, 1621, 1761
TspGWI ACGGA 1 cut(s) 1206
TspRI CASTG 2 cut(s) 965, 1556
Van91I CCANNNNNTGG 3 cut(s) 653, 906, 1499
Vha464I CTTAAG 1 cut(s) 191
VpaK11BI GGWCC 2 cut(s) 966, 1758
VspI ATTAAT 1 cut(s) 609
XagI CCTNNNNNAGG 3 cut(s) 169, 194, 870
XapI RAATTY 3 cut(s) 515, 1231, 1340
XceI RCATGY 1 cut(s) 1060
XcmI CCANNNNNNNNNTGG 3 cut(s) 907, 1255, 1485
XhoI CTCGAG 1 cut(s) 133
XmaJI CCTAGG 1 cut(s) 934
XspI CTAG 3 cut(s) 935, 1416, 1685
ZrmI AGTACT 1 cut(s) 979
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.