Rh4CG246500

NAD(P)-binding Rossmann-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0013079
Physical Location & Seq
Forward (+)
49572918 .. 49576735
3818 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG246500.1

Sequence Viewer

Length: 1452 bp
ATGCTCTGCTCCTTTCACTCTTCTCTCATCCTTAAACCCCTGCTCAAAACCCATAAACCCTTAACCATAACCTTATCTTCCCAACCCAAACCCCCACCCAGAAAAAGACCCACCTTTGATGGTGGTGACCAGAGCCCAAAACCCACATCCAGAAACCGACACAAACGCTCCTACGGAGCCTCAAGAAGGTCAATCTTGAAGACCCTTAAGCAGGAGCAAGTCACTTTCACTACTCCAGTCCCTGATGACCCCATTGTGGGCATTATCGGCGGAGGCATGGCCGGTCTTGCTTGTGCTCTCTATTTGGAAAAACGCGGCGTCCGCTCCACCGTTTTCGACACGGGGGTTCATGGTCTGGGAGGAAGAATGGGAACACGGATAGTAGATCCTCAACCTTTGATATTTGATCATGCAGCTCAGTTCTTTACGGCCAGCAATCCTCTGTTTGTTGAGTTGGTTCAAGGTTGGATGGAGCAAGGTCTGGTTCGGGAATGGCAGGGTACAATAGGTGAGCTTGAAGTGGGTGGTAAATTTGTGCCACTTCCTTCTTCTCCTCCAATGTATATAGGTGTTAATGGAATGCGCCCTGTTGCTGAATCACTATTGTCTCAGAGTTCTATGATTAATGTGGAGAGACCGACCTGGATCAGTAAACTCGAGCCATTTAATGGGACGTGGTACTTGAGTGAGAATGGAAATCCTCGTGGGCAGTTTGATGCAATTGTTATTGCACATAATGGTAAATGTGCAAACCGTTTGCTTGGTTCGTCAGGCTTACCACTAATTGCAGGACAGATGAAGAGGCTGGAATTGAGTTCTGTATGGGCTCTCCTTGCCGCATTTGAGGATCCACTTGAAATCCCCGGTACTGCCACATTTCCTTTCGAAGGTGCTTTTGTAAAAGGGGTTGATTCCATCTCCTGGATGGCAAATAATACCAAAAAACTCCTAGGCTCCCAGAGTGGTGGCCCTCACTGTTGGACCTTTCTCAGTACTGCAGCTTATGGAAAGCGAAACAAGGTTCCACAGGAGAATATACCAACTGCCACAAAAGAGAAGGTGACAGCAGGCATGCTTATGGGCGTTGAAGAGGCACTTGGATTACCAAAAGGATCACTTCAGACGCCATTTTATACCCGACTCCAGTTATGGGGTGCGGCTCTTCCAACTAATACGCCTGGTATCCCCTGCATCTTTGATCCACACGGAAGGGCTGGTATATGCGGTGATTGGTTACTCGGTTCGAATTTAGAATCAGCAGCCATAAGCGGAATGGCTCTTGCAAATCATATGGCGGACTATTTCCAAAGCGGTGGAGACCGTCCCGAAGAGTTTTCTGTTGGTTTACGCAGCGAATTTCAACGACTTAAAGGACATGATATAGGCCAATTTCCAGGGTTGGCGCCCGTAAGCGAAACACATACAGCACCAGAGTTGCAGCTTACCACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAD_binding_8

Protein Analysis

483

Amino Acids

52.25

Weight (kDa)

8.92

Isoelectric Point (pI)

48.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_8 PF13450 88 - 148 5.4e-12 NAD(P)-binding Rossmann-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04650
fragaria_vesca FvH4_4g17540
malus_domestica MD04G1226700.v1.1
prunus_persica Prupe.6G345400_v2.0.a1 Prupe.6G345400_v2.0.a1 Prupe.6G345400_v2.0.a1 Prupe.6G345400_v2.0.a1
pyrus_communis pycom04g19990
rosa_chinensis RchiOBHm_Chr4g0421451
rosa_laevigata RLG00000007683
rosa_multiflora Rmu_sc0001962.1_g000014
rosa_roxburghii Rroxscaffold_5G00363720
rosa_rugosa Rorug04G0171300
rosa_samantha Rh4AG232000 Rh4BG234900 Rh4CG246500 Rh4DG230500
rosa_wichuraiana Rw4G020210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1402
AccB7I CCANNNNNTGG 2 cut(s) 668, 921
AccBSI CCGCTC 1 cut(s) 324
AccII CGCG 1 cut(s) 315
AciI CCGC 9 cut(s) 270, 315, 322, 837, 1157, 1224, 1269, 1295, 1311
AclWI GGATC 6 cut(s) 380, 653, 842, 855, 1120, 1193
AcoI YGGCCR 2 cut(s) 279, 429
AcsI RAATTY 3 cut(s) 530, 1246, 1355
AcuI CTGAAG 1 cut(s) 1103
AcyI GRCGYC 3 cut(s) 318, 1124, 1403
AfaI GTAC 4 cut(s) 502, 680, 868, 994
AfiI CCNNNNNNNGG 8 cut(s) 186, 211, 256, 257, 668, 887, 921, 1150
AflII CTTAAG 1 cut(s) 206
AgsI TTSAA 6 cut(s) 199, 461, 518, 857, 1088, 1361
AjiI CACGTC 1 cut(s) 675
AjnI CCWGG 4 cut(s) 641, 920, 1177, 1393
AjuI GAANNNNNNNTTGG 2 cut(s) 1080, 1112
AluBI AGCT 4 cut(s) 416, 514, 1001, 1441
AluI AGCT 4 cut(s) 416, 514, 1001, 1441
Alw21I GWGCWC 1 cut(s) 298
Alw26I GTCTC 3 cut(s) 612, 628, 1311
AlwI GGATC 6 cut(s) 380, 653, 842, 855, 1120, 1193
AlwNI CAGNNNCTG 1 cut(s) 242
Ama87I CYCGRG 1 cut(s) 656
AoxI GGCC 4 cut(s) 279, 429, 967, 1384
ApeKI GCWGC 5 cut(s) 413, 998, 1259, 1350, 1438
ApoI RAATTY 3 cut(s) 530, 1246, 1355
AseI ATTAAT 1 cut(s) 624
AspA2I CCTAGG 1 cut(s) 949
AspLEI GCGC 2 cut(s) 585, 1405
AspS9I GGNCC 2 cut(s) 968, 981
AsuC2I CCSGG 1 cut(s) 864
AsuHPI GGTGA 4 cut(s) 137, 521, 1072, 1238
AsuII TTCGAA 2 cut(s) 885, 1244
AvaI CYCGRG 1 cut(s) 656
AvaII GGWCC 1 cut(s) 981
AvrII CCTAGG 1 cut(s) 949
BaeI ACNNNNGTAYC 2 cut(s) 670, 703
BamHI GGATCC 1 cut(s) 847
BanI GGYRCC 1 cut(s) 1402
BanII GRGCYC 2 cut(s) 137, 829
BauI CACGAG 1 cut(s) 702
BbsI GAAGAC 1 cut(s) 206
Bbv12I GWGCWC 1 cut(s) 298
BbvI GCAGC 4 cut(s) 425, 1010, 1271, 1362
BccI CCATC 4 cut(s) 113, 463, 919, 923
BceAI ACGGC 1 cut(s) 444
BciT130I CCWGG 4 cut(s) 643, 922, 1179, 1395
BciVI GTATCC 1 cut(s) 1193
BclI TGATCA 1 cut(s) 406
BcnI CCSGG 1 cut(s) 864
BcoDI GTCTC 3 cut(s) 612, 628, 1311
BfaI CTAG 1 cut(s) 950
BfmI CTRYAG 1 cut(s) 996
BfoI RGCGCY 1 cut(s) 1406
BfrI CTTAAG 1 cut(s) 206
BfuI GTATCC 1 cut(s) 1193
BisI GCNGC 8 cut(s) 316, 414, 837, 999, 1158, 1260, 1351, 1439
BlnI CCTAGG 1 cut(s) 949
BlsI GCNGC 8 cut(s) 317, 415, 838, 1000, 1159, 1261, 1352, 1440
BmcAI AGTACT 1 cut(s) 994
Bme1390I CCNGG 5 cut(s) 643, 864, 922, 1179, 1395
Bme18I GGWCC 1 cut(s) 981
BmeT110I CYCGRG 1 cut(s) 656
BmgBI CACGTC 1 cut(s) 675
BmgT120I GGNCC 2 cut(s) 968, 981
BmiI GGNNCC 5 cut(s) 178, 849, 955, 1023, 1404
BmrFI CCNGG 5 cut(s) 643, 864, 922, 1179, 1395
BmsI GCATC 2 cut(s) 706, 1200
BpiI GAAGAC 1 cut(s) 206
BpmI CTGGAG 2 cut(s) 219, 1127
Bpu14I TTCGAA 2 cut(s) 885, 1244
BpuEI CTTGAG 2 cut(s) 166, 703
BpuMI CCSGG 1 cut(s) 864
BsaHI GRCGYC 3 cut(s) 318, 1124, 1403
BsaI GGTCTC 2 cut(s) 628, 1311
BsaJI CCNNGG 3 cut(s) 862, 949, 1394
BsaXI ACNNNNNCTCC 2 cut(s) 152, 182
Bsc4I CCNNNNNNNGG 8 cut(s) 186, 211, 256, 257, 668, 887, 921, 1150
Bse118I RCCGGY 1 cut(s) 281
Bse1I ACTGG 2 cut(s) 236, 1144
BseBI CCWGG 4 cut(s) 643, 922, 1179, 1395
BseDI CCNNGG 3 cut(s) 862, 949, 1394
BseGI GGATG 4 cut(s) 27, 146, 474, 930
BseLI CCNNNNNNNGG 8 cut(s) 186, 211, 256, 257, 668, 887, 921, 1150
BseMII CTCAG 3 cut(s) 431, 623, 1003
BseNI ACTGG 2 cut(s) 236, 1144
BseRI GAGGAG 1 cut(s) 543
BseXI GCAGC 4 cut(s) 425, 1010, 1271, 1362
Bsh1236I CGCG 1 cut(s) 315
BshFI GGCC 4 cut(s) 281, 431, 969, 1386
BshNI GGYRCC 1 cut(s) 1402
BsiHKAI GWGCWC 1 cut(s) 298
BsiHKCI CYCGRG 1 cut(s) 656
BsiSI CCGG 2 cut(s) 282, 864
BslFI GGGAC 3 cut(s) 224, 685, 1308
BslI CCNNNNNNNGG 8 cut(s) 186, 211, 256, 257, 668, 887, 921, 1150
BsmAI GTCTC 3 cut(s) 612, 628, 1311
BsmFI GGGAC 3 cut(s) 224, 685, 1308
BsmI GAATGC 1 cut(s) 585
BsnI GGCC 4 cut(s) 281, 431, 969, 1386
Bso31I GGTCTC 2 cut(s) 628, 1311
BsoBI CYCGRG 1 cut(s) 656
Bsp119I TTCGAA 2 cut(s) 885, 1244
Bsp1286I GDGCHC 3 cut(s) 137, 298, 829
Bsp143I GATC 6 cut(s) 385, 406, 645, 847, 1112, 1198
BspACI CCGC 9 cut(s) 270, 315, 322, 837, 1157, 1224, 1269, 1295, 1311
BspANI GGCC 4 cut(s) 281, 431, 969, 1386
BspCNI CTCAG 3 cut(s) 430, 622, 1002
BspFNI CGCG 1 cut(s) 315
BspLI GGNNCC 5 cut(s) 178, 849, 955, 1023, 1404
BspMAI CTGCAG 1 cut(s) 1000
BspPI GGATC 6 cut(s) 380, 653, 842, 855, 1120, 1193
BspQI GCTCTTC 1 cut(s) 1167
BspT104I TTCGAA 2 cut(s) 885, 1244
BspT107I GGYRCC 1 cut(s) 1402
BspTI CTTAAG 1 cut(s) 206
BspTNI GGTCTC 2 cut(s) 628, 1311
BsrBI CCGCTC 1 cut(s) 324
BsrFI RCCGGY 1 cut(s) 281
BsrI ACTGG 2 cut(s) 236, 1144
BssAI RCCGGY 1 cut(s) 281
BssECI CCNNGG 3 cut(s) 862, 949, 1394
BssMI GATC 6 cut(s) 385, 406, 645, 847, 1112, 1198
BssNI GRCGYC 3 cut(s) 318, 1124, 1403
BssSI CACGAG 1 cut(s) 702
BssT1I CCWWGG 1 cut(s) 949
Bst2BI CACGAG 1 cut(s) 702
Bst2UI CCWGG 4 cut(s) 643, 922, 1179, 1395
Bst4CI ACNGT 4 cut(s) 331, 755, 977, 1322
Bst6I CTCTTC 5 cut(s) 25, 794, 1083, 1167, 1323
BstACI GRCGYC 3 cut(s) 318, 1124, 1403
BstAFI CTTAAG 1 cut(s) 206
BstBI TTCGAA 2 cut(s) 885, 1244
BstC8I GCNNGC 3 cut(s) 433, 1069, 1073
BstDEI CTNAG 3 cut(s) 417, 609, 989
BstEII GGTNACC 1 cut(s) 125
BstENI CCTNNNNNAGG 3 cut(s) 184, 209, 885
BstF5I GGATG 4 cut(s) 27, 146, 474, 930
BstFNI CGCG 1 cut(s) 315
BstH2I RGCGCY 1 cut(s) 1406
BstHHI GCGC 2 cut(s) 585, 1405
BstKTI GATC 6 cut(s) 388, 409, 648, 850, 1115, 1201
BstMAI GTCTC 3 cut(s) 612, 628, 1311
BstMBI GATC 6 cut(s) 385, 406, 645, 847, 1112, 1198
BstMWI GCNNNNNNNGC 4 cut(s) 267, 287, 321, 833
BstNI CCWGG 4 cut(s) 643, 922, 1179, 1395
BstNSI RCATGY 1 cut(s) 1075
BstPI GGTNACC 1 cut(s) 125
BstSCI CCNGG 5 cut(s) 641, 862, 920, 1177, 1393
BstSFI CTRYAG 1 cut(s) 996
BstUI CGCG 1 cut(s) 315
BstV1I GCAGC 4 cut(s) 425, 1010, 1271, 1362
BstV2I GAAGAC 1 cut(s) 206
BstX2I RGATCY 2 cut(s) 385, 847
BstXI CCANNNNNNTGG 2 cut(s) 965, 1313
BstYI RGATCY 2 cut(s) 385, 847
BsuI GTATCC 1 cut(s) 1193
BsuRI GGCC 4 cut(s) 281, 431, 969, 1386
BtrI CACGTC 1 cut(s) 675
BtsCI GGATG 4 cut(s) 27, 146, 474, 930
BtsIMutI CAGTG 1 cut(s) 973
Cac8I GCNNGC 3 cut(s) 433, 1069, 1073
CaiI CAGNNNCTG 1 cut(s) 242
CfoI GCGC 2 cut(s) 585, 1405
Cfr10I RCCGGY 1 cut(s) 281
Cfr13I GGNCC 2 cut(s) 968, 981
CseI GACGC 2 cut(s) 307, 1132
Csp6I GTAC 4 cut(s) 501, 679, 867, 993
CviAII CATG 5 cut(s) 277, 350, 410, 1072, 1376
CviQI GTAC 4 cut(s) 501, 679, 867, 993
DdeI CTNAG 3 cut(s) 417, 609, 989
DinI GGCGCC 1 cut(s) 1404
DpnI GATC 6 cut(s) 387, 408, 647, 849, 1114, 1200
DpnII GATC 6 cut(s) 385, 406, 645, 847, 1112, 1198
EaeI YGGCCR 2 cut(s) 279, 429
Eam1104I CTCTTC 5 cut(s) 25, 794, 1083, 1167, 1323
EarI CTCTTC 5 cut(s) 25, 794, 1083, 1167, 1323
EciI GGCGGA 2 cut(s) 285, 1310
Eco130I CCWWGG 1 cut(s) 949
Eco24I GRGCYC 2 cut(s) 137, 829
Eco31I GGTCTC 2 cut(s) 628, 1311
Eco47I GGWCC 1 cut(s) 981
Eco57I CTGAAG 1 cut(s) 1103
Eco88I CYCGRG 1 cut(s) 656
Eco91I GGTNACC 1 cut(s) 125
EcoNI CCTNNNNNAGG 3 cut(s) 184, 209, 885
EcoO65I GGTNACC 1 cut(s) 125
EcoRII CCWGG 4 cut(s) 641, 920, 1177, 1393
EcoT14I CCWWGG 1 cut(s) 949
EcoT38I GRGCYC 2 cut(s) 137, 829
EgeI GGCGCC 1 cut(s) 1404
EheI GGCGCC 1 cut(s) 1404
ErhI CCWWGG 1 cut(s) 949
FaeI CATG 5 cut(s) 280, 353, 413, 1075, 1379
FalI AAGNNNNNCTT 4 cut(s) 1080, 1112, 1101, 1133
FaqI GGGAC 3 cut(s) 224, 685, 1308
FatI CATG 5 cut(s) 276, 349, 409, 1071, 1375
FauNDI CATATG 1 cut(s) 1290
FbaI TGATCA 1 cut(s) 406
Fnu4HI GCNGC 8 cut(s) 316, 414, 837, 999, 1158, 1260, 1351, 1439
FokI GGATG 4 cut(s) 14, 133, 481, 937
FriOI GRGCYC 2 cut(s) 137, 829
Fsp4HI GCNGC 8 cut(s) 316, 414, 837, 999, 1158, 1260, 1351, 1439
FspBI CTAG 1 cut(s) 950
GlaI GCGC 2 cut(s) 584, 1404
GluI GCNGC 8 cut(s) 316, 414, 837, 999, 1158, 1260, 1351, 1439
GsuI CTGGAG 2 cut(s) 219, 1127
HaeII RGCGCY 1 cut(s) 1406
HaeIII GGCC 4 cut(s) 281, 431, 969, 1386
HapII CCGG 2 cut(s) 282, 864
HgaI GACGC 2 cut(s) 307, 1132
HhaI GCGC 2 cut(s) 585, 1405
Hin1I GRCGYC 3 cut(s) 318, 1124, 1403
Hin1II CATG 5 cut(s) 280, 353, 413, 1075, 1379
Hin6I GCGC 2 cut(s) 583, 1403
HinP1I GCGC 2 cut(s) 583, 1403
HinfI GANTC 4 cut(s) 596, 911, 1140, 1253
HpaII CCGG 2 cut(s) 282, 864
HphI GGTGA 4 cut(s) 137, 521, 1072, 1238
Hpy166II GTNNAC 2 cut(s) 653, 1346
Hpy188I TCNGA 2 cut(s) 612, 1122
Hpy188III TCNNGA 5 cut(s) 150, 183, 196, 488, 1325
Hpy8I GTNNAC 2 cut(s) 653, 1346
HpyAV CCTTC 5 cut(s) 180, 555, 881, 1051, 1203
HpyCH4III ACNGT 4 cut(s) 331, 755, 977, 1322
HpyCH4IV ACGT 1 cut(s) 674
HpyCH4V TGCA 9 cut(s) 413, 719, 731, 749, 788, 998, 1191, 1283, 1438
HpyF10VI GCNNNNNNNGC 4 cut(s) 267, 287, 321, 833
HpyF3I CTNAG 3 cut(s) 417, 609, 989
HpySE526I ACGT 1 cut(s) 674
Hsp92I GRCGYC 3 cut(s) 318, 1124, 1403
Hsp92II CATG 5 cut(s) 280, 353, 413, 1075, 1379
HspAI GCGC 2 cut(s) 583, 1403
KasI GGCGCC 1 cut(s) 1402
Ksp22I TGATCA 1 cut(s) 406
Kzo9I GATC 6 cut(s) 385, 406, 645, 847, 1112, 1198
LguI GCTCTTC 1 cut(s) 1167
LmnI GCTCC 7 cut(s) 14, 173, 176, 214, 329, 472, 959
Lsp1109I GCAGC 4 cut(s) 425, 1010, 1271, 1362
LweI GCATC 2 cut(s) 706, 1200
MaeI CTAG 1 cut(s) 950
MaeII ACGT 1 cut(s) 674
MaeIII GTNAC 4 cut(s) 125, 220, 1060, 1233
MalI GATC 6 cut(s) 387, 408, 647, 849, 1114, 1200
MbiI CCGCTC 1 cut(s) 324
MboI GATC 6 cut(s) 385, 406, 645, 847, 1112, 1198
MboII GAAGA 9 cut(s) 12, 69, 211, 375, 540, 811, 1100, 1154, 1340
MfeI CAATTG 1 cut(s) 720
MflI RGATCY 2 cut(s) 385, 847
MhlI GDGCHC 3 cut(s) 137, 298, 829
MluCI AATT 7 cut(s) 530, 720, 783, 809, 1246, 1355, 1388
Mly113I GGCGCC 1 cut(s) 1403
MlyI GAGTC 1 cut(s) 1134
MmeI TCCRAC 3 cut(s) 446, 959, 1190
MseI TTAA 8 cut(s) 33, 62, 207, 573, 624, 666, 1368, 1450
MslI CAYNNNNRTG 1 cut(s) 1076
MspCI CTTAAG 1 cut(s) 206
MspI CCGG 2 cut(s) 282, 864
MspR9I CCNGG 5 cut(s) 643, 864, 922, 1179, 1395
MunI CAATTG 1 cut(s) 720
Mva1269I GAATGC 1 cut(s) 585
MvaI CCWGG 4 cut(s) 643, 922, 1179, 1395
MvnI CGCG 1 cut(s) 315
MwoI GCNNNNNNNGC 4 cut(s) 267, 287, 321, 833
NarI GGCGCC 1 cut(s) 1403
NciI CCSGG 1 cut(s) 864
NdeI CATATG 1 cut(s) 1290
NdeII GATC 6 cut(s) 385, 406, 645, 847, 1112, 1198
NlaIII CATG 5 cut(s) 280, 353, 413, 1075, 1379
NlaIV GGNNCC 5 cut(s) 178, 849, 955, 1023, 1404
NmuCI GTSAC 3 cut(s) 125, 220, 1060
NspI RCATGY 1 cut(s) 1075
NspV TTCGAA 2 cut(s) 885, 1244
PaeI GCATGC 1 cut(s) 1075
PaeR7I CTCGAG 1 cut(s) 656
PciSI GCTCTTC 1 cut(s) 1167
PctI GAATGC 1 cut(s) 585
PfeI GAWTC 3 cut(s) 596, 911, 1253
PflMI CCANNNNNTGG 2 cut(s) 668, 921
PfoI TCCNGGA 1 cut(s) 920
PkrI GCNGC 8 cut(s) 317, 415, 838, 1000, 1159, 1261, 1352, 1440
PleI GAGTC 1 cut(s) 1134
PluTI GGCGCC 1 cut(s) 1406
PpsI GAGTC 1 cut(s) 1134
PshBI ATTAAT 1 cut(s) 624
Psp6I CCWGG 4 cut(s) 641, 920, 1177, 1393
PspEI GGTNACC 1 cut(s) 125
PspGI CCWGG 4 cut(s) 641, 920, 1177, 1393
PspN4I GGNNCC 5 cut(s) 178, 849, 955, 1023, 1404
PspPI GGNCC 2 cut(s) 968, 981
PspXI VCTCGAGB 1 cut(s) 656
PstI CTGCAG 1 cut(s) 1000
PstNI CAGNNNCTG 1 cut(s) 242
PsuI RGATCY 2 cut(s) 385, 847
RsaI GTAC 4 cut(s) 502, 680, 868, 994
RsaNI GTAC 4 cut(s) 501, 679, 867, 993
RseI CAYNNNNRTG 1 cut(s) 1076
SapI GCTCTTC 1 cut(s) 1167
SaqAI TTAA 8 cut(s) 33, 62, 207, 573, 624, 666, 1368, 1450
SatI GCNGC 8 cut(s) 316, 414, 837, 999, 1158, 1260, 1351, 1439
Sau3AI GATC 6 cut(s) 385, 406, 645, 847, 1112, 1198
Sau96I GGNCC 2 cut(s) 968, 981
ScaI AGTACT 1 cut(s) 994
SchI GAGTC 1 cut(s) 1134
ScrFI CCNGG 5 cut(s) 643, 864, 922, 1179, 1395
SduI GDGCHC 3 cut(s) 137, 298, 829
SfaNI GCATC 2 cut(s) 706, 1200
SfcI CTRYAG 1 cut(s) 996
SfoI GGCGCC 1 cut(s) 1404
Sfr274I CTCGAG 1 cut(s) 656
SfuI TTCGAA 2 cut(s) 885, 1244
SinI GGWCC 1 cut(s) 981
SlaI CTCGAG 1 cut(s) 656
SmiMI CAYNNNNRTG 1 cut(s) 1076
SmlI CTYRAG 4 cut(s) 181, 206, 656, 682
SmoI CTYRAG 4 cut(s) 181, 206, 656, 682
SphI GCATGC 1 cut(s) 1075
Sse9I AATT 7 cut(s) 530, 720, 783, 809, 1246, 1355, 1388
SsiI CCGC 9 cut(s) 270, 315, 322, 837, 1157, 1224, 1269, 1295, 1311
SspDI GGCGCC 1 cut(s) 1402
SspMI CTAG 1 cut(s) 950
StyD4I CCNGG 5 cut(s) 641, 862, 920, 1177, 1393
StyI CCWWGG 1 cut(s) 949
TaaI ACNGT 4 cut(s) 331, 755, 977, 1322
TaiI ACGT 1 cut(s) 677
TaqI TCGA 4 cut(s) 336, 657, 885, 1244
TaqII GACCGA 1 cut(s) 652
TasI AATT 7 cut(s) 530, 720, 783, 809, 1246, 1355, 1388
TatI WGTACW 1 cut(s) 992
TauI GCSGC 3 cut(s) 318, 839, 1160
TfiI GAWTC 3 cut(s) 596, 911, 1253
Tru1I TTAA 8 cut(s) 33, 62, 207, 573, 624, 666, 1368, 1450
Tru9I TTAA 8 cut(s) 33, 62, 207, 573, 624, 666, 1368, 1450
TscAI CASTG 1 cut(s) 980
TseFI GTSAC 3 cut(s) 125, 220, 1060
TseI GCWGC 5 cut(s) 413, 998, 1259, 1350, 1438
Tsp45I GTSAC 3 cut(s) 125, 220, 1060
TspDTI ATGAA 2 cut(s) 338, 812
TspGWI ACGGA 3 cut(s) 189, 391, 1221
TspRI CASTG 1 cut(s) 980
Van91I CCANNNNNTGG 2 cut(s) 668, 921
Vha464I CTTAAG 1 cut(s) 206
VpaK11BI GGWCC 1 cut(s) 981
VspI ATTAAT 1 cut(s) 624
XagI CCTNNNNNAGG 3 cut(s) 184, 209, 885
XapI RAATTY 3 cut(s) 530, 1246, 1355
XceI RCATGY 1 cut(s) 1075
XcmI CCANNNNNNNNNTGG 2 cut(s) 922, 1270
XhoI CTCGAG 1 cut(s) 656
XmaJI CCTAGG 1 cut(s) 949
XspI CTAG 1 cut(s) 950
ZrmI AGTACT 1 cut(s) 994
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.