Rroxscaffold_5G00363720

NAD(P)-binding Rossmann-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0013079
Physical Location & Seq
Forward (+)
45019355 .. 45024004
4650 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00363720.1

Sequence Viewer

Length: 1449 bp
ATGCTCTGCTCCTTTCACTCTTCTCTCATCCTTAAACCCCTGCTCAAAACCCATAAACCCTTAACCATAACCTTATCTTCCCAACCCAAACCCCCACCCAGAAAAAGACCCACCTTTGATCGTGAGCAAAGCCCAAAACCCACCTCGAGAAACCGGCACAAACGCTCCTATGGAGCCTCAAGAAGGTCAATCTTGAAGACCCTGAAGCAGGAGCAAGTCACTTTCACTACTCCTGTCCCTGATGACCCCATTGTGGGCATTATCGGCGGAGGCATGGCCGGTCTTGCTTGTGCTCTCTATTTGGAAAAACGCGGCGTCCGCTCCACCGTTTTCGACACGGGGGTTCATGGTCTGGGAGGAAGAATGGGAACGCGGATAGTAGATCCTCAGCCTTTGATATTTGATCATGCAGCTCAGTTCTTTACGGCCAGCAATCCTCTGTTTGTTGAGTTGGTTCAAGGTTGGATGGAGCAAGGTCTGGTTCGAGAATGGCAGGGTACAATAGGTGAGCTTGAAGTGGGTGGTAAATTTGTGCCACTTCCTTCTCCTCCTCCAAGGTATATAGGTGTTAATGGAATGCGCCCTGTTGCTGACTTACTATTGTCTCAGAGTTCTATGATTAATGTGGAAAGACCGACCTGGATCAGTAAACTTGAGCCATTTAATGGGACGTGGTACTTGAGTGAGAATGGAAAACCTCGTGGGCAGTTCGATGCAATTGTTATTGCACATAATGGTAAATGTGCAAACCGCTTGCTTGGTTCGTCAGGCTTACCACTAATTGCAGGACAGATGAAGAGGCTGGAATTGAGTTCTGTATGGGCTCTCCTTGCCGCATTTGAGGATCCACTTCAAATTCCCGGTACCGACACATTTCCTTTCGAAGGAGCTTTTGTAAAAGGGGTTGATTCCCTCTCCTGGATGGCAAATAATACCAAAAAACTCCTAGGCTCCCAGAGTGGTGGCCCTCACTGTTGGACCTTTCTCAGTACTGCAGCTTATGGAAAGCGAAACAAGGTTCCACAGGAGAATATACCAACTGCCACAAAAGAGAAGGTGACAGCAGGCATGCTTATGGGCGTTGAAGAGGCACTTGGATTACCAAAAGGATCACTTCAGACACCATTTTATACCCGACTCCAGTTATGGGGTGCGGCTCTTCCAACTAATACGCCTGGTATCCCCTGCATCTTTGATCCGCACGGAAGGGCTGGTATGTGCGGTGATTGGTTACTCGGTTCGAATTTAGAATCAGCAGCCATAAGTGGAATGGCTCTTGCAAATCATATGGCGGACTATTTCCAAAGCGGTGGAGACCGTCCCGAAGAGTTTTCTGTTGGTTTACGCAGCGAATTTCAACAACTTAAAGGACATGATATAGGCCAATTTCCAGGGTTGGCGCCTGTAAGCGAAACACATACAGCGCCAGAGTTGCAGCTTACCACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAD_binding_8

Protein Analysis

482

Amino Acids

52.4

Weight (kDa)

9.12

Isoelectric Point (pI)

47.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_8 PF13450 87 - 147 5.4e-12 NAD(P)-binding Rossmann-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04650
fragaria_vesca FvH4_4g17540
malus_domestica MD04G1226700.v1.1
prunus_persica Prupe.6G345400_v2.0.a1 Prupe.6G345400_v2.0.a1 Prupe.6G345400_v2.0.a1 Prupe.6G345400_v2.0.a1
pyrus_communis pycom04g19990
rosa_chinensis RchiOBHm_Chr4g0421451
rosa_laevigata RLG00000007683
rosa_multiflora Rmu_sc0001962.1_g000014
rosa_roxburghii Rroxscaffold_5G00363720
rosa_rugosa Rorug04G0171300
rosa_samantha Rh4AG232000 Rh4BG234900 Rh4CG246500 Rh4DG230500
rosa_wichuraiana Rw4G020210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 863
AccB1I GGYRCC 2 cut(s) 863, 1399
AccB7I CCANNNNNTGG 1 cut(s) 665
AccBSI CCGCTC 1 cut(s) 321
AccII CGCG 2 cut(s) 312, 373
AclWI GGATC 6 cut(s) 377, 650, 839, 852, 1117, 1190
AcoI YGGCCR 2 cut(s) 276, 426
AcsI RAATTY 4 cut(s) 527, 855, 1243, 1352
AcuI CTGAAG 2 cut(s) 224, 1100
AcyI GRCGYC 2 cut(s) 315, 1400
AfaI GTAC 4 cut(s) 499, 677, 865, 991
AfiI CCNNNNNNNGG 8 cut(s) 183, 208, 253, 254, 665, 884, 918, 1147
AgsI TTSAA 6 cut(s) 196, 458, 515, 854, 1085, 1358
AjiI CACGTC 1 cut(s) 672
AjnI CCWGG 4 cut(s) 638, 917, 1174, 1390
AjuI GAANNNNNNNTTGG 2 cut(s) 1077, 1109
AluBI AGCT 5 cut(s) 413, 511, 890, 998, 1438
AluI AGCT 5 cut(s) 413, 511, 890, 998, 1438
Alw21I GWGCWC 1 cut(s) 295
Alw26I GTCTC 2 cut(s) 609, 1308
AlwI GGATC 6 cut(s) 377, 650, 839, 852, 1117, 1190
Ama87I CYCGRG 1 cut(s) 145
AoxI GGCC 4 cut(s) 276, 426, 964, 1381
ApeKI GCWGC 5 cut(s) 410, 995, 1256, 1347, 1435
ApoI RAATTY 4 cut(s) 527, 855, 1243, 1352
AseI ATTAAT 1 cut(s) 621
Asp718I GGTACC 1 cut(s) 863
AspA2I CCTAGG 1 cut(s) 946
AspLEI GCGC 3 cut(s) 582, 1402, 1426
AspS9I GGNCC 2 cut(s) 965, 978
AsuC2I CCSGG 1 cut(s) 861
AsuHPI GGTGA 3 cut(s) 518, 1069, 1235
AsuII TTCGAA 2 cut(s) 882, 1241
AvaI CYCGRG 1 cut(s) 145
AvaII GGWCC 1 cut(s) 978
AvrII CCTAGG 1 cut(s) 946
BaeI ACNNNNGTAYC 2 cut(s) 667, 700
BamHI GGATCC 1 cut(s) 844
BanI GGYRCC 2 cut(s) 863, 1399
BanII GRGCYC 1 cut(s) 826
BauI CACGAG 1 cut(s) 699
BbsI GAAGAC 1 cut(s) 203
Bbv12I GWGCWC 1 cut(s) 295
BbvCI CCTCAGC 1 cut(s) 387
BbvI GCAGC 4 cut(s) 422, 1007, 1268, 1359
BccI CCATC 2 cut(s) 460, 916
BceAI ACGGC 1 cut(s) 441
BciT130I CCWGG 4 cut(s) 640, 919, 1176, 1392
BciVI GTATCC 1 cut(s) 1190
BclI TGATCA 1 cut(s) 403
BcnI CCSGG 1 cut(s) 861
BcoDI GTCTC 2 cut(s) 609, 1308
BfaI CTAG 1 cut(s) 947
BfmI CTRYAG 1 cut(s) 993
BfoI RGCGCY 2 cut(s) 1403, 1427
BfuI GTATCC 1 cut(s) 1190
BisI GCNGC 8 cut(s) 313, 411, 834, 996, 1155, 1257, 1348, 1436
BlnI CCTAGG 1 cut(s) 946
BlsI GCNGC 8 cut(s) 314, 412, 835, 997, 1156, 1258, 1349, 1437
BmcAI AGTACT 1 cut(s) 991
Bme1390I CCNGG 5 cut(s) 640, 861, 919, 1176, 1392
Bme18I GGWCC 1 cut(s) 978
BmeT110I CYCGRG 1 cut(s) 145
BmgBI CACGTC 1 cut(s) 672
BmgT120I GGNCC 2 cut(s) 965, 978
BmiI GGNNCC 6 cut(s) 175, 846, 865, 952, 1020, 1401
BmrFI CCNGG 5 cut(s) 640, 861, 919, 1176, 1392
BmsI GCATC 2 cut(s) 703, 1197
BpiI GAAGAC 1 cut(s) 203
BpmI CTGGAG 1 cut(s) 1124
Bpu10I CCTNAGC 1 cut(s) 387
Bpu14I TTCGAA 2 cut(s) 882, 1241
BpuEI CTTGAG 3 cut(s) 163, 674, 700
BpuMI CCSGG 1 cut(s) 861
BsaHI GRCGYC 2 cut(s) 315, 1400
BsaI GGTCTC 1 cut(s) 1308
BsaJI CCNNGG 3 cut(s) 554, 946, 1391
BsaXI ACNNNNNCTCC 4 cut(s) 149, 179, 879, 909
Bsc4I CCNNNNNNNGG 8 cut(s) 183, 208, 253, 254, 665, 884, 918, 1147
Bse118I RCCGGY 2 cut(s) 153, 278
Bse1I ACTGG 1 cut(s) 1141
BseBI CCWGG 4 cut(s) 640, 919, 1176, 1392
BseDI CCNNGG 3 cut(s) 554, 946, 1391
BseGI GGATG 3 cut(s) 27, 471, 927
BseLI CCNNNNNNNGG 8 cut(s) 183, 208, 253, 254, 665, 884, 918, 1147
BseMII CTCAG 4 cut(s) 401, 428, 620, 1000
BseNI ACTGG 1 cut(s) 1141
BseRI GAGGAG 2 cut(s) 537, 540
BseXI GCAGC 4 cut(s) 422, 1007, 1268, 1359
Bsh1236I CGCG 2 cut(s) 312, 373
BshFI GGCC 4 cut(s) 278, 428, 966, 1383
BshNI GGYRCC 2 cut(s) 863, 1399
BsiHKAI GWGCWC 1 cut(s) 295
BsiHKCI CYCGRG 1 cut(s) 145
BsiSI CCGG 3 cut(s) 154, 279, 861
BslFI GGGAC 3 cut(s) 221, 682, 1305
BslI CCNNNNNNNGG 8 cut(s) 183, 208, 253, 254, 665, 884, 918, 1147
BsmAI GTCTC 2 cut(s) 609, 1308
BsmFI GGGAC 3 cut(s) 221, 682, 1305
BsmI GAATGC 1 cut(s) 582
BsnI GGCC 4 cut(s) 278, 428, 966, 1383
Bso31I GGTCTC 1 cut(s) 1308
BsoBI CYCGRG 1 cut(s) 145
Bsp119I TTCGAA 2 cut(s) 882, 1241
Bsp1286I GDGCHC 2 cut(s) 295, 826
Bsp143I GATC 7 cut(s) 118, 382, 403, 642, 844, 1109, 1195
BspANI GGCC 4 cut(s) 278, 428, 966, 1383
BspCNI CTCAG 4 cut(s) 400, 427, 619, 999
BspFNI CGCG 2 cut(s) 312, 373
BspLI GGNNCC 6 cut(s) 175, 846, 865, 952, 1020, 1401
BspMAI CTGCAG 1 cut(s) 997
BspPI GGATC 6 cut(s) 377, 650, 839, 852, 1117, 1190
BspQI GCTCTTC 1 cut(s) 1164
BspT104I TTCGAA 2 cut(s) 882, 1241
BspT107I GGYRCC 2 cut(s) 863, 1399
BspTNI GGTCTC 1 cut(s) 1308
BsrBI CCGCTC 1 cut(s) 321
BsrFI RCCGGY 2 cut(s) 153, 278
BsrI ACTGG 1 cut(s) 1141
BssAI RCCGGY 2 cut(s) 153, 278
BssECI CCNNGG 3 cut(s) 554, 946, 1391
BssMI GATC 7 cut(s) 118, 382, 403, 642, 844, 1109, 1195
BssNI GRCGYC 2 cut(s) 315, 1400
BssSI CACGAG 1 cut(s) 699
BssT1I CCWWGG 2 cut(s) 554, 946
Bst2BI CACGAG 1 cut(s) 699
Bst2UI CCWGG 4 cut(s) 640, 919, 1176, 1392
Bst4CI ACNGT 3 cut(s) 328, 974, 1319
Bst6I CTCTTC 5 cut(s) 25, 791, 1080, 1164, 1320
BstACI GRCGYC 2 cut(s) 315, 1400
BstBI TTCGAA 2 cut(s) 882, 1241
BstC8I GCNNGC 4 cut(s) 430, 755, 1066, 1070
BstDEI CTNAG 4 cut(s) 387, 414, 606, 986
BstENI CCTNNNNNAGG 3 cut(s) 181, 206, 882
BstF5I GGATG 3 cut(s) 27, 471, 927
BstFNI CGCG 2 cut(s) 312, 373
BstH2I RGCGCY 2 cut(s) 1403, 1427
BstHHI GCGC 3 cut(s) 582, 1402, 1426
BstKTI GATC 7 cut(s) 121, 385, 406, 645, 847, 1112, 1198
BstMAI GTCTC 2 cut(s) 609, 1308
BstMBI GATC 7 cut(s) 118, 382, 403, 642, 844, 1109, 1195
BstMWI GCNNNNNNNGC 5 cut(s) 264, 284, 318, 830, 1432
BstNI CCWGG 4 cut(s) 640, 919, 1176, 1392
BstNSI RCATGY 1 cut(s) 1072
BstSCI CCNGG 5 cut(s) 638, 859, 917, 1174, 1390
BstSFI CTRYAG 1 cut(s) 993
BstUI CGCG 2 cut(s) 312, 373
BstV1I GCAGC 4 cut(s) 422, 1007, 1268, 1359
BstV2I GAAGAC 1 cut(s) 203
BstX2I RGATCY 2 cut(s) 382, 844
BstXI CCANNNNNNTGG 2 cut(s) 962, 1310
BstYI RGATCY 2 cut(s) 382, 844
BsuI GTATCC 1 cut(s) 1190
BsuRI GGCC 4 cut(s) 278, 428, 966, 1383
BtrI CACGTC 1 cut(s) 672
BtsCI GGATG 3 cut(s) 27, 471, 927
BtsIMutI CAGTG 1 cut(s) 970
Cac8I GCNNGC 4 cut(s) 430, 755, 1066, 1070
CfoI GCGC 3 cut(s) 582, 1402, 1426
Cfr10I RCCGGY 2 cut(s) 153, 278
Cfr13I GGNCC 2 cut(s) 965, 978
CseI GACGC 1 cut(s) 304
Csp6I GTAC 4 cut(s) 498, 676, 864, 990
CviAII CATG 5 cut(s) 274, 347, 407, 1069, 1373
CviQI GTAC 4 cut(s) 498, 676, 864, 990
DdeI CTNAG 4 cut(s) 387, 414, 606, 986
DinI GGCGCC 1 cut(s) 1401
DpnI GATC 7 cut(s) 120, 384, 405, 644, 846, 1111, 1197
DpnII GATC 7 cut(s) 118, 382, 403, 642, 844, 1109, 1195
EaeI YGGCCR 2 cut(s) 276, 426
Eam1104I CTCTTC 5 cut(s) 25, 791, 1080, 1164, 1320
EarI CTCTTC 5 cut(s) 25, 791, 1080, 1164, 1320
EciI GGCGGA 2 cut(s) 282, 1307
Eco130I CCWWGG 2 cut(s) 554, 946
Eco24I GRGCYC 1 cut(s) 826
Eco31I GGTCTC 1 cut(s) 1308
Eco47I GGWCC 1 cut(s) 978
Eco57I CTGAAG 2 cut(s) 224, 1100
Eco88I CYCGRG 1 cut(s) 145
EcoNI CCTNNNNNAGG 3 cut(s) 181, 206, 882
EcoRII CCWGG 4 cut(s) 638, 917, 1174, 1390
EcoT14I CCWWGG 2 cut(s) 554, 946
EcoT38I GRGCYC 1 cut(s) 826
EgeI GGCGCC 1 cut(s) 1401
EheI GGCGCC 1 cut(s) 1401
ErhI CCWWGG 2 cut(s) 554, 946
FaeI CATG 5 cut(s) 277, 350, 410, 1072, 1376
FalI AAGNNNNNCTT 4 cut(s) 1077, 1109, 1098, 1130
FaqI GGGAC 3 cut(s) 221, 682, 1305
FatI CATG 5 cut(s) 273, 346, 406, 1068, 1372
FauNDI CATATG 1 cut(s) 1287
FbaI TGATCA 1 cut(s) 403
Fnu4HI GCNGC 8 cut(s) 313, 411, 834, 996, 1155, 1257, 1348, 1436
FokI GGATG 3 cut(s) 14, 478, 934
FriOI GRGCYC 1 cut(s) 826
Fsp4HI GCNGC 8 cut(s) 313, 411, 834, 996, 1155, 1257, 1348, 1436
FspBI CTAG 1 cut(s) 947
GlaI GCGC 3 cut(s) 581, 1401, 1425
GluI GCNGC 8 cut(s) 313, 411, 834, 996, 1155, 1257, 1348, 1436
GsuI CTGGAG 1 cut(s) 1124
HaeII RGCGCY 2 cut(s) 1403, 1427
HaeIII GGCC 4 cut(s) 278, 428, 966, 1383
HapII CCGG 3 cut(s) 154, 279, 861
HgaI GACGC 1 cut(s) 304
HhaI GCGC 3 cut(s) 582, 1402, 1426
Hin1I GRCGYC 2 cut(s) 315, 1400
Hin1II CATG 5 cut(s) 277, 350, 410, 1072, 1376
Hin6I GCGC 3 cut(s) 580, 1400, 1424
HinP1I GCGC 3 cut(s) 580, 1400, 1424
HinfI GANTC 3 cut(s) 908, 1137, 1250
HpaII CCGG 3 cut(s) 154, 279, 861
HphI GGTGA 3 cut(s) 518, 1069, 1235
Hpy166II GTNNAC 2 cut(s) 650, 1343
Hpy188I TCNGA 2 cut(s) 609, 1119
Hpy188III TCNNGA 6 cut(s) 122, 147, 180, 193, 485, 1322
Hpy8I GTNNAC 2 cut(s) 650, 1343
HpyAV CCTTC 5 cut(s) 177, 552, 878, 1048, 1200
HpyCH4III ACNGT 3 cut(s) 328, 974, 1319
HpyCH4IV ACGT 1 cut(s) 671
HpyCH4V TGCA 9 cut(s) 410, 716, 728, 746, 785, 995, 1188, 1280, 1435
HpyF10VI GCNNNNNNNGC 5 cut(s) 264, 284, 318, 830, 1432
HpyF3I CTNAG 4 cut(s) 387, 414, 606, 986
HpySE526I ACGT 1 cut(s) 671
Hsp92I GRCGYC 2 cut(s) 315, 1400
Hsp92II CATG 5 cut(s) 277, 350, 410, 1072, 1376
HspAI GCGC 3 cut(s) 580, 1400, 1424
KasI GGCGCC 1 cut(s) 1399
KpnI GGTACC 1 cut(s) 867
Ksp22I TGATCA 1 cut(s) 403
Kzo9I GATC 7 cut(s) 118, 382, 403, 642, 844, 1109, 1195
LguI GCTCTTC 1 cut(s) 1164
LmnI GCTCC 8 cut(s) 14, 170, 173, 211, 326, 469, 887, 956
Lsp1109I GCAGC 4 cut(s) 422, 1007, 1268, 1359
LweI GCATC 2 cut(s) 703, 1197
MaeI CTAG 1 cut(s) 947
MaeII ACGT 1 cut(s) 671
MaeIII GTNAC 3 cut(s) 217, 1057, 1230
MalI GATC 7 cut(s) 120, 384, 405, 644, 846, 1111, 1197
MbiI CCGCTC 1 cut(s) 321
MboI GATC 7 cut(s) 118, 382, 403, 642, 844, 1109, 1195
MboII GAAGA 8 cut(s) 12, 69, 208, 372, 808, 1097, 1151, 1337
MfeI CAATTG 1 cut(s) 717
MflI RGATCY 2 cut(s) 382, 844
MhlI GDGCHC 2 cut(s) 295, 826
MluCI AATT 8 cut(s) 527, 717, 780, 806, 855, 1243, 1352, 1385
Mly113I GGCGCC 1 cut(s) 1400
MlyI GAGTC 1 cut(s) 1131
MmeI TCCRAC 3 cut(s) 443, 956, 1187
MseI TTAA 7 cut(s) 33, 62, 570, 621, 663, 1365, 1447
MslI CAYNNNNRTG 1 cut(s) 1073
MspI CCGG 3 cut(s) 154, 279, 861
MspR9I CCNGG 5 cut(s) 640, 861, 919, 1176, 1392
MunI CAATTG 1 cut(s) 717
Mva1269I GAATGC 1 cut(s) 582
MvaI CCWGG 4 cut(s) 640, 919, 1176, 1392
MvnI CGCG 2 cut(s) 312, 373
MwoI GCNNNNNNNGC 5 cut(s) 264, 284, 318, 830, 1432
NarI GGCGCC 1 cut(s) 1400
NciI CCSGG 1 cut(s) 861
NdeI CATATG 1 cut(s) 1287
NdeII GATC 7 cut(s) 118, 382, 403, 642, 844, 1109, 1195
NlaIII CATG 5 cut(s) 277, 350, 410, 1072, 1376
NlaIV GGNNCC 6 cut(s) 175, 846, 865, 952, 1020, 1401
NmuCI GTSAC 2 cut(s) 217, 1057
NspI RCATGY 1 cut(s) 1072
NspV TTCGAA 2 cut(s) 882, 1241
PaeI GCATGC 1 cut(s) 1072
PaeR7I CTCGAG 1 cut(s) 145
PciSI GCTCTTC 1 cut(s) 1164
PctI GAATGC 1 cut(s) 582
PfeI GAWTC 2 cut(s) 908, 1250
PflMI CCANNNNNTGG 1 cut(s) 665
PfoI TCCNGGA 1 cut(s) 917
PkrI GCNGC 8 cut(s) 314, 412, 835, 997, 1156, 1258, 1349, 1437
PleI GAGTC 1 cut(s) 1131
PluTI GGCGCC 1 cut(s) 1403
PpsI GAGTC 1 cut(s) 1131
PshBI ATTAAT 1 cut(s) 621
Psp6I CCWGG 4 cut(s) 638, 917, 1174, 1390
PspGI CCWGG 4 cut(s) 638, 917, 1174, 1390
PspN4I GGNNCC 6 cut(s) 175, 846, 865, 952, 1020, 1401
PspPI GGNCC 2 cut(s) 965, 978
PstI CTGCAG 1 cut(s) 997
PsuI RGATCY 2 cut(s) 382, 844
RsaI GTAC 4 cut(s) 499, 677, 865, 991
RsaNI GTAC 4 cut(s) 498, 676, 864, 990
RseI CAYNNNNRTG 1 cut(s) 1073
SapI GCTCTTC 1 cut(s) 1164
SaqAI TTAA 7 cut(s) 33, 62, 570, 621, 663, 1365, 1447
SatI GCNGC 8 cut(s) 313, 411, 834, 996, 1155, 1257, 1348, 1436
Sau3AI GATC 7 cut(s) 118, 382, 403, 642, 844, 1109, 1195
Sau96I GGNCC 2 cut(s) 965, 978
ScaI AGTACT 1 cut(s) 991
SchI GAGTC 1 cut(s) 1131
ScrFI CCNGG 5 cut(s) 640, 861, 919, 1176, 1392
SduI GDGCHC 2 cut(s) 295, 826
SfaNI GCATC 2 cut(s) 703, 1197
SfcI CTRYAG 1 cut(s) 993
SfoI GGCGCC 1 cut(s) 1401
Sfr274I CTCGAG 1 cut(s) 145
SfuI TTCGAA 2 cut(s) 882, 1241
SinI GGWCC 1 cut(s) 978
SlaI CTCGAG 1 cut(s) 145
SmiMI CAYNNNNRTG 1 cut(s) 1073
SmlI CTYRAG 4 cut(s) 145, 178, 653, 679
SmoI CTYRAG 4 cut(s) 145, 178, 653, 679
SphI GCATGC 1 cut(s) 1072
Sse9I AATT 8 cut(s) 527, 717, 780, 806, 855, 1243, 1352, 1385
SspDI GGCGCC 1 cut(s) 1399
SspMI CTAG 1 cut(s) 947
StyD4I CCNGG 5 cut(s) 638, 859, 917, 1174, 1390
StyI CCWWGG 2 cut(s) 554, 946
TaaI ACNGT 3 cut(s) 328, 974, 1319
TaiI ACGT 1 cut(s) 674
TaqI TCGA 6 cut(s) 146, 333, 484, 711, 882, 1241
TaqII GACCGA 1 cut(s) 649
TasI AATT 8 cut(s) 527, 717, 780, 806, 855, 1243, 1352, 1385
TatI WGTACW 1 cut(s) 989
TauI GCSGC 3 cut(s) 315, 836, 1157
TfiI GAWTC 2 cut(s) 908, 1250
Tru1I TTAA 7 cut(s) 33, 62, 570, 621, 663, 1365, 1447
Tru9I TTAA 7 cut(s) 33, 62, 570, 621, 663, 1365, 1447
TscAI CASTG 1 cut(s) 977
TseFI GTSAC 2 cut(s) 217, 1057
TseI GCWGC 5 cut(s) 410, 995, 1256, 1347, 1435
Tsp45I GTSAC 2 cut(s) 217, 1057
TspDTI ATGAA 2 cut(s) 335, 809
TspGWI ACGGA 1 cut(s) 1218
TspRI CASTG 1 cut(s) 977
Van91I CCANNNNNTGG 1 cut(s) 665
VpaK11BI GGWCC 1 cut(s) 978
VspI ATTAAT 1 cut(s) 621
XagI CCTNNNNNAGG 3 cut(s) 181, 206, 882
XapI RAATTY 4 cut(s) 527, 855, 1243, 1352
XceI RCATGY 1 cut(s) 1072
XcmI CCANNNNNNNNNTGG 1 cut(s) 1267
XhoI CTCGAG 1 cut(s) 145
XmaJI CCTAGG 1 cut(s) 946
XspI CTAG 1 cut(s) 947
ZrmI AGTACT 1 cut(s) 991
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.