Rh4BG234900

NAD(P)-binding Rossmann-like domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Forward (+)
40093130 .. 40096957
3828 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG234900.1

Sequence Viewer

Length: 1176 bp
ATGGCCGGTCTTGCTTGTGCTCTCTATTTGGAAAAACGCGGCGTCCGCTCCACCGTTTTTGACACGGGGGTTCATGGTCTGGGAGGAAGAATGGGAACGCGGATAGTAGATCCTCAGCCTTTGATATTTGATCATGCAGCTCAGTTCTTTACGGCCAGCAATCCTCTGTTTGTTGAGTTGGTTCAAGGTTGGATGGAGCAAGGTCTGGTTCGAGAATGGCAGGGTACAATAGGTGAGCTTGAAGTGGGTGGTAAATTTGTGCCACTTCCTTCTTCTCCTCCAAGGTATATAGGTGTTAATGGAATGCGCCCTGTTGCTGACTCACTATTGTCTCAGAGTTCTATGATTAATGTGGAGAGACCCACCTGGATCAGTAAACTTGAGCCATTTAATGGGACGTGGTACTTGAGTGAGAATGGAAAACCTCGTGGGCAGTTCGATGCAATTGTTATTGCACATAATGGTAAATGTGCAAACCGTTTGCTTGGTTCGTCAGGCTTACCACTAATTGCAGGACAGATGAAGAGGCTGGAATTGAGTTCTGTATGGGCTCTCCTTGCCGCATTTGAGGATCCACTTCAAATCCCCGGTACCGACACATTTCCTTTCGAAGGAGCTTTTGTAAAAGGGGTTGATTCCATCTCCTGGATGGCAAATAATACCAAAAAACTCCTAGGCTCCCAGAGTGGTGGCCCTCACTGTTGGACCTTTCTCAGTACTGCAGCTTATGGAAAGCGAAACAAGGTTCCACAGGAGAATATACCAACTGCCACAAAAGAGAAGGTGACAGCAGGCATGCTTATGGGCGTTGAAGAGGCACTTGGATTACCAAAAGGATCACTTCAGACGCCATTTTATACCCGACTCCAGTTATGGGGTGCGGCTCTTCCAACTAATACTCCTGGTATCCCCTGCATCTTTGATCCGCACGGAAGGGCTGGTATATGCGGTGATTGGTTACTTGGTTCGAATTTAGAATCAGCAGCCATAAGCGGAATGGCTCTTGCAAATCATATGGCGGACTATTTCCAAAGCGGTGGAGACCGTCCCGAAGAGTTTTCTGTTGGTTTACGCAGCGAATTTCAACGACTTAAAGGACATGATATGGGCCAATTTCCAGGGTTAGCGCCCGTAAGCGAAACACATACAGCGCCAGAGTTGCAGCTTACCACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

391

Amino Acids

42.21

Weight (kDa)

6.26

Isoelectric Point (pI)

40.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_8 PF13450 1 - 56 1.2e-07 NAD(P)-binding Rossmann-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013079)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 590
AccB1I GGYRCC 1 cut(s) 590
AccB7I CCANNNNNTGG 2 cut(s) 392, 645
AccBSI CCGCTC 1 cut(s) 48
AccII CGCG 2 cut(s) 39, 100
AclWI GGATC 6 cut(s) 104, 377, 566, 579, 844, 917
AcoI YGGCCR 2 cut(s) 3, 153
AcsI RAATTY 3 cut(s) 254, 970, 1079
AcuI CTGAAG 1 cut(s) 827
AcyI GRCGYC 2 cut(s) 42, 848
AfaI GTAC 4 cut(s) 226, 404, 592, 718
AfiI CCNNNNNNNGG 4 cut(s) 392, 611, 645, 874
AgsI TTSAA 5 cut(s) 185, 242, 581, 812, 1085
AjiI CACGTC 1 cut(s) 399
AjnI CCWGG 4 cut(s) 365, 644, 901, 1117
AjuI GAANNNNNNNTTGG 2 cut(s) 804, 836
AluBI AGCT 5 cut(s) 140, 238, 617, 725, 1165
AluI AGCT 5 cut(s) 140, 238, 617, 725, 1165
Alw21I GWGCWC 1 cut(s) 22
Alw26I GTCTC 3 cut(s) 336, 352, 1035
AlwI GGATC 6 cut(s) 104, 377, 566, 579, 844, 917
AoxI GGCC 4 cut(s) 3, 153, 691, 1108
ApeKI GCWGC 5 cut(s) 137, 722, 983, 1074, 1162
ApoI RAATTY 3 cut(s) 254, 970, 1079
AseI ATTAAT 1 cut(s) 348
Asp718I GGTACC 1 cut(s) 590
AspA2I CCTAGG 1 cut(s) 673
AspLEI GCGC 3 cut(s) 309, 1129, 1153
AspS9I GGNCC 3 cut(s) 692, 705, 1108
AsuC2I CCSGG 1 cut(s) 588
AsuHPI GGTGA 3 cut(s) 245, 796, 962
AsuII TTCGAA 2 cut(s) 609, 968
AvaII GGWCC 1 cut(s) 705
AvrII CCTAGG 1 cut(s) 673
BaeI ACNNNNGTAYC 2 cut(s) 394, 427
BamHI GGATCC 1 cut(s) 571
BanI GGYRCC 1 cut(s) 590
BanII GRGCYC 1 cut(s) 553
BauI CACGAG 1 cut(s) 426
Bbv12I GWGCWC 1 cut(s) 22
BbvCI CCTCAGC 1 cut(s) 114
BbvI GCAGC 4 cut(s) 149, 734, 995, 1086
BccI CCATC 3 cut(s) 187, 643, 647
BceAI ACGGC 1 cut(s) 168
BciT130I CCWGG 4 cut(s) 367, 646, 903, 1119
BciVI GTATCC 1 cut(s) 917
BclI TGATCA 1 cut(s) 130
BcnI CCSGG 1 cut(s) 588
BcoDI GTCTC 3 cut(s) 336, 352, 1035
BfaI CTAG 1 cut(s) 674
BfmI CTRYAG 1 cut(s) 720
BfoI RGCGCY 2 cut(s) 1130, 1154
BfuI GTATCC 1 cut(s) 917
BisI GCNGC 8 cut(s) 40, 138, 561, 723, 882, 984, 1075, 1163
BlnI CCTAGG 1 cut(s) 673
BlsI GCNGC 8 cut(s) 41, 139, 562, 724, 883, 985, 1076, 1164
BmcAI AGTACT 1 cut(s) 718
Bme1390I CCNGG 5 cut(s) 367, 588, 646, 903, 1119
Bme18I GGWCC 1 cut(s) 705
BmgBI CACGTC 1 cut(s) 399
BmgT120I GGNCC 3 cut(s) 692, 705, 1108
BmiI GGNNCC 4 cut(s) 573, 592, 679, 747
BmrFI CCNGG 5 cut(s) 367, 588, 646, 903, 1119
BmsI GCATC 2 cut(s) 430, 924
BpmI CTGGAG 1 cut(s) 851
Bpu10I CCTNAGC 1 cut(s) 114
Bpu14I TTCGAA 2 cut(s) 609, 968
BpuEI CTTGAG 2 cut(s) 401, 427
BpuMI CCSGG 1 cut(s) 588
BsaHI GRCGYC 2 cut(s) 42, 848
BsaI GGTCTC 2 cut(s) 352, 1035
BsaJI CCNNGG 4 cut(s) 281, 586, 673, 1118
BsaXI ACNNNNNCTCC 4 cut(s) 606, 636, 883, 913
Bsc4I CCNNNNNNNGG 4 cut(s) 392, 611, 645, 874
Bse118I RCCGGY 1 cut(s) 5
Bse1I ACTGG 1 cut(s) 868
BseBI CCWGG 4 cut(s) 367, 646, 903, 1119
BseDI CCNNGG 4 cut(s) 281, 586, 673, 1118
BseGI GGATG 2 cut(s) 198, 654
BseLI CCNNNNNNNGG 4 cut(s) 392, 611, 645, 874
BseMII CTCAG 4 cut(s) 128, 155, 347, 727
BseNI ACTGG 1 cut(s) 868
BseRI GAGGAG 1 cut(s) 267
BseXI GCAGC 4 cut(s) 149, 734, 995, 1086
Bsh1236I CGCG 2 cut(s) 39, 100
BshFI GGCC 4 cut(s) 5, 155, 693, 1110
BshNI GGYRCC 1 cut(s) 590
BsiHKAI GWGCWC 1 cut(s) 22
BsiSI CCGG 2 cut(s) 6, 588
BslFI GGGAC 2 cut(s) 409, 1032
BslI CCNNNNNNNGG 4 cut(s) 392, 611, 645, 874
BsmAI GTCTC 3 cut(s) 336, 352, 1035
BsmFI GGGAC 2 cut(s) 409, 1032
BsmI GAATGC 1 cut(s) 309
BsnI GGCC 4 cut(s) 5, 155, 693, 1110
Bso31I GGTCTC 2 cut(s) 352, 1035
Bsp119I TTCGAA 2 cut(s) 609, 968
Bsp1286I GDGCHC 2 cut(s) 22, 553
Bsp143I GATC 6 cut(s) 109, 130, 369, 571, 836, 922
BspANI GGCC 4 cut(s) 5, 155, 693, 1110
BspCNI CTCAG 4 cut(s) 127, 154, 346, 726
BspFNI CGCG 2 cut(s) 39, 100
BspLI GGNNCC 4 cut(s) 573, 592, 679, 747
BspMAI CTGCAG 1 cut(s) 724
BspPI GGATC 6 cut(s) 104, 377, 566, 579, 844, 917
BspQI GCTCTTC 1 cut(s) 891
BspT104I TTCGAA 2 cut(s) 609, 968
BspT107I GGYRCC 1 cut(s) 590
BspTNI GGTCTC 2 cut(s) 352, 1035
BsrBI CCGCTC 1 cut(s) 48
BsrFI RCCGGY 1 cut(s) 5
BsrI ACTGG 1 cut(s) 868
BssAI RCCGGY 1 cut(s) 5
BssECI CCNNGG 4 cut(s) 281, 586, 673, 1118
BssMI GATC 6 cut(s) 109, 130, 369, 571, 836, 922
BssNI GRCGYC 2 cut(s) 42, 848
BssSI CACGAG 1 cut(s) 426
BssT1I CCWWGG 2 cut(s) 281, 673
Bst2BI CACGAG 1 cut(s) 426
Bst2UI CCWGG 4 cut(s) 367, 646, 903, 1119
Bst4CI ACNGT 4 cut(s) 55, 479, 701, 1046
Bst6I CTCTTC 4 cut(s) 518, 807, 891, 1047
BstACI GRCGYC 2 cut(s) 42, 848
BstBI TTCGAA 2 cut(s) 609, 968
BstC8I GCNNGC 3 cut(s) 157, 793, 797
BstDEI CTNAG 4 cut(s) 114, 141, 333, 713
BstENI CCTNNNNNAGG 1 cut(s) 609
BstF5I GGATG 2 cut(s) 198, 654
BstFNI CGCG 2 cut(s) 39, 100
BstH2I RGCGCY 2 cut(s) 1130, 1154
BstHHI GCGC 3 cut(s) 309, 1129, 1153
BstKTI GATC 6 cut(s) 112, 133, 372, 574, 839, 925
BstMAI GTCTC 3 cut(s) 336, 352, 1035
BstMBI GATC 6 cut(s) 109, 130, 369, 571, 836, 922
BstMWI GCNNNNNNNGC 4 cut(s) 11, 45, 557, 1159
BstNI CCWGG 4 cut(s) 367, 646, 903, 1119
BstNSI RCATGY 1 cut(s) 799
BstSCI CCNGG 5 cut(s) 365, 586, 644, 901, 1117
BstSFI CTRYAG 1 cut(s) 720
BstUI CGCG 2 cut(s) 39, 100
BstV1I GCAGC 4 cut(s) 149, 734, 995, 1086
BstX2I RGATCY 2 cut(s) 109, 571
BstXI CCANNNNNNTGG 2 cut(s) 689, 1037
BstYI RGATCY 2 cut(s) 109, 571
BsuI GTATCC 1 cut(s) 917
BsuRI GGCC 4 cut(s) 5, 155, 693, 1110
BtrI CACGTC 1 cut(s) 399
BtsCI GGATG 2 cut(s) 198, 654
BtsIMutI CAGTG 1 cut(s) 697
Cac8I GCNNGC 3 cut(s) 157, 793, 797
CfoI GCGC 3 cut(s) 309, 1129, 1153
Cfr10I RCCGGY 1 cut(s) 5
Cfr13I GGNCC 3 cut(s) 692, 705, 1108
CseI GACGC 2 cut(s) 31, 856
Csp6I GTAC 4 cut(s) 225, 403, 591, 717
CspCI CAANNNNNGTGG 2 cut(s) 40, 75
CviAII CATG 4 cut(s) 74, 134, 796, 1100
CviQI GTAC 4 cut(s) 225, 403, 591, 717
DdeI CTNAG 4 cut(s) 114, 141, 333, 713
DpnI GATC 6 cut(s) 111, 132, 371, 573, 838, 924
DpnII GATC 6 cut(s) 109, 130, 369, 571, 836, 922
EaeI YGGCCR 2 cut(s) 3, 153
Eam1104I CTCTTC 4 cut(s) 518, 807, 891, 1047
EarI CTCTTC 4 cut(s) 518, 807, 891, 1047
EciI GGCGGA 1 cut(s) 1034
Eco130I CCWWGG 2 cut(s) 281, 673
Eco24I GRGCYC 1 cut(s) 553
Eco31I GGTCTC 2 cut(s) 352, 1035
Eco47I GGWCC 1 cut(s) 705
Eco57I CTGAAG 1 cut(s) 827
EcoNI CCTNNNNNAGG 1 cut(s) 609
EcoRII CCWGG 4 cut(s) 365, 644, 901, 1117
EcoT14I CCWWGG 2 cut(s) 281, 673
EcoT38I GRGCYC 1 cut(s) 553
ErhI CCWWGG 2 cut(s) 281, 673
FaeI CATG 4 cut(s) 77, 137, 799, 1103
FalI AAGNNNNNCTT 4 cut(s) 804, 836, 825, 857
FaqI GGGAC 2 cut(s) 409, 1032
FatI CATG 4 cut(s) 73, 133, 795, 1099
FauNDI CATATG 1 cut(s) 1014
FbaI TGATCA 1 cut(s) 130
Fnu4HI GCNGC 8 cut(s) 40, 138, 561, 723, 882, 984, 1075, 1163
FokI GGATG 2 cut(s) 205, 661
FriOI GRGCYC 1 cut(s) 553
Fsp4HI GCNGC 8 cut(s) 40, 138, 561, 723, 882, 984, 1075, 1163
FspBI CTAG 1 cut(s) 674
GlaI GCGC 3 cut(s) 308, 1128, 1152
GluI GCNGC 8 cut(s) 40, 138, 561, 723, 882, 984, 1075, 1163
GsuI CTGGAG 1 cut(s) 851
HaeII RGCGCY 2 cut(s) 1130, 1154
HaeIII GGCC 4 cut(s) 5, 155, 693, 1110
HapII CCGG 2 cut(s) 6, 588
HgaI GACGC 2 cut(s) 31, 856
HhaI GCGC 3 cut(s) 309, 1129, 1153
Hin1I GRCGYC 2 cut(s) 42, 848
Hin1II CATG 4 cut(s) 77, 137, 799, 1103
Hin6I GCGC 3 cut(s) 307, 1127, 1151
HinP1I GCGC 3 cut(s) 307, 1127, 1151
HinfI GANTC 4 cut(s) 320, 635, 864, 977
HpaII CCGG 2 cut(s) 6, 588
HphI GGTGA 3 cut(s) 245, 796, 962
Hpy166II GTNNAC 2 cut(s) 377, 1070
Hpy188I TCNGA 2 cut(s) 336, 846
Hpy188III TCNNGA 2 cut(s) 212, 1049
Hpy8I GTNNAC 2 cut(s) 377, 1070
HpyAV CCTTC 4 cut(s) 279, 605, 775, 927
HpyCH4III ACNGT 4 cut(s) 55, 479, 701, 1046
HpyCH4IV ACGT 1 cut(s) 398
HpyCH4V TGCA 9 cut(s) 137, 443, 455, 473, 512, 722, 915, 1007, 1162
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 45, 557, 1159
HpyF3I CTNAG 4 cut(s) 114, 141, 333, 713
HpySE526I ACGT 1 cut(s) 398
Hsp92I GRCGYC 2 cut(s) 42, 848
Hsp92II CATG 4 cut(s) 77, 137, 799, 1103
HspAI GCGC 3 cut(s) 307, 1127, 1151
KpnI GGTACC 1 cut(s) 594
Ksp22I TGATCA 1 cut(s) 130
Kzo9I GATC 6 cut(s) 109, 130, 369, 571, 836, 922
LguI GCTCTTC 1 cut(s) 891
LmnI GCTCC 4 cut(s) 53, 196, 614, 683
Lsp1109I GCAGC 4 cut(s) 149, 734, 995, 1086
LweI GCATC 2 cut(s) 430, 924
MaeI CTAG 1 cut(s) 674
MaeII ACGT 1 cut(s) 398
MaeIII GTNAC 2 cut(s) 784, 957
MalI GATC 6 cut(s) 111, 132, 371, 573, 838, 924
MbiI CCGCTC 1 cut(s) 48
MboI GATC 6 cut(s) 109, 130, 369, 571, 836, 922
MboII GAAGA 6 cut(s) 99, 264, 535, 824, 878, 1064
MfeI CAATTG 1 cut(s) 444
MflI RGATCY 2 cut(s) 109, 571
MhlI GDGCHC 2 cut(s) 22, 553
MluCI AATT 7 cut(s) 254, 444, 507, 533, 970, 1079, 1112
MlyI GAGTC 2 cut(s) 314, 858
MmeI TCCRAC 3 cut(s) 170, 683, 914
MnlI CCTC 9 cut(s) 77, 123, 174, 288, 435, 519, 562, 705, 808
MseI TTAA 5 cut(s) 297, 348, 390, 1092, 1174
MslI CAYNNNNRTG 1 cut(s) 800
MspI CCGG 2 cut(s) 6, 588
MspR9I CCNGG 5 cut(s) 367, 588, 646, 903, 1119
MunI CAATTG 1 cut(s) 444
Mva1269I GAATGC 1 cut(s) 309
MvaI CCWGG 4 cut(s) 367, 646, 903, 1119
MvnI CGCG 2 cut(s) 39, 100
MwoI GCNNNNNNNGC 4 cut(s) 11, 45, 557, 1159
NciI CCSGG 1 cut(s) 588
NdeI CATATG 1 cut(s) 1014
NdeII GATC 6 cut(s) 109, 130, 369, 571, 836, 922
NlaIII CATG 4 cut(s) 77, 137, 799, 1103
NlaIV GGNNCC 4 cut(s) 573, 592, 679, 747
NmuCI GTSAC 1 cut(s) 784
NspI RCATGY 1 cut(s) 799
NspV TTCGAA 2 cut(s) 609, 968
PaeI GCATGC 1 cut(s) 799
PciSI GCTCTTC 1 cut(s) 891
PctI GAATGC 1 cut(s) 309
PfeI GAWTC 2 cut(s) 635, 977
PflMI CCANNNNNTGG 2 cut(s) 392, 645
PfoI TCCNGGA 1 cut(s) 644
PkrI GCNGC 8 cut(s) 41, 139, 562, 724, 883, 985, 1076, 1164
PleI GAGTC 2 cut(s) 314, 858
PpsI GAGTC 2 cut(s) 314, 858
PshBI ATTAAT 1 cut(s) 348
Psp6I CCWGG 4 cut(s) 365, 644, 901, 1117
PspGI CCWGG 4 cut(s) 365, 644, 901, 1117
PspN4I GGNNCC 4 cut(s) 573, 592, 679, 747
PspPI GGNCC 3 cut(s) 692, 705, 1108
PstI CTGCAG 1 cut(s) 724
PsuI RGATCY 2 cut(s) 109, 571
RsaI GTAC 4 cut(s) 226, 404, 592, 718
RsaNI GTAC 4 cut(s) 225, 403, 591, 717
RseI CAYNNNNRTG 1 cut(s) 800
SapI GCTCTTC 1 cut(s) 891
SaqAI TTAA 5 cut(s) 297, 348, 390, 1092, 1174
SatI GCNGC 8 cut(s) 40, 138, 561, 723, 882, 984, 1075, 1163
Sau3AI GATC 6 cut(s) 109, 130, 369, 571, 836, 922
Sau96I GGNCC 3 cut(s) 692, 705, 1108
ScaI AGTACT 1 cut(s) 718
SchI GAGTC 2 cut(s) 314, 858
ScrFI CCNGG 5 cut(s) 367, 588, 646, 903, 1119
SduI GDGCHC 2 cut(s) 22, 553
SfaNI GCATC 2 cut(s) 430, 924
SfcI CTRYAG 1 cut(s) 720
SfuI TTCGAA 2 cut(s) 609, 968
SinI GGWCC 1 cut(s) 705
SmiMI CAYNNNNRTG 1 cut(s) 800
SmlI CTYRAG 2 cut(s) 380, 406
SmoI CTYRAG 2 cut(s) 380, 406
SphI GCATGC 1 cut(s) 799
Sse9I AATT 7 cut(s) 254, 444, 507, 533, 970, 1079, 1112
SspMI CTAG 1 cut(s) 674
StyD4I CCNGG 5 cut(s) 365, 586, 644, 901, 1117
StyI CCWWGG 2 cut(s) 281, 673
TaaI ACNGT 4 cut(s) 55, 479, 701, 1046
TaiI ACGT 1 cut(s) 401
TaqI TCGA 4 cut(s) 211, 438, 609, 968
TasI AATT 7 cut(s) 254, 444, 507, 533, 970, 1079, 1112
TatI WGTACW 1 cut(s) 716
TauI GCSGC 3 cut(s) 42, 563, 884
TfiI GAWTC 2 cut(s) 635, 977
Tru1I TTAA 5 cut(s) 297, 348, 390, 1092, 1174
Tru9I TTAA 5 cut(s) 297, 348, 390, 1092, 1174
TscAI CASTG 1 cut(s) 704
TseFI GTSAC 1 cut(s) 784
TseI GCWGC 5 cut(s) 137, 722, 983, 1074, 1162
Tsp45I GTSAC 1 cut(s) 784
TspDTI ATGAA 2 cut(s) 62, 536
TspGWI ACGGA 1 cut(s) 945
TspRI CASTG 1 cut(s) 704
Van91I CCANNNNNTGG 2 cut(s) 392, 645
VpaK11BI GGWCC 1 cut(s) 705
VspI ATTAAT 1 cut(s) 348
XagI CCTNNNNNAGG 1 cut(s) 609
XapI RAATTY 3 cut(s) 254, 970, 1079
XceI RCATGY 1 cut(s) 799
XcmI CCANNNNNNNNNTGG 2 cut(s) 646, 994
XmaJI CCTAGG 1 cut(s) 673
XspI CTAG 1 cut(s) 674
ZrmI AGTACT 1 cut(s) 718
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.