Prupe.6G365900_v2.0.a1

2-alkenal reductase (NADP(

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0017133
Physical Location & Seq
Forward (+)
30708615 .. 30711318
2704 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G365900.1

Sequence Viewer

Length: 1053 bp
ATGGAAGAAGAATGTCTAGTACAAGTGGAAGAGAACAAGCAAGTGATATTCAGGGGGTTCATAGAGGGAACTCCAAAGGAGACAGACTTGCAAGTGATGGTTGGGAAGAAGATTGAGCTTAAAGCTCCTCCTAAAGGCTCTGGCGCTTTTCTGGTCAAGAATCTCTACCTCTCTTGTGACCCTTATATGAGGGGCCGCATGCGTGATTTCCACGACTCCTATCTCCCCCCATTCCTTCCTGGCCAGCCACTCCAAGGATTTGGTGTCTCCAAAGTTGTGGATTCTGATAATCCCAATTTCAAGCCTGGCGACTTCATCTCAGGGATCACCGGATGGGAAGAATACAGCTTGATTCCCACAACTGAGCTGTCGAGAAAAATTAAGCCAGATGACATCCCTCTATCATACCATGTGGGTCTTCTTGGTATGCCAGGTTTTACTGCATATGCAGGATTCTATGAGGTCTGCTCCCCTAAGAAAGGGGAATCTGTTTTAGTTTCTGCTGCTTCAGGAGCCGTTGGGCAGCTTGTTGGCCAACTGGCTAAATTGCATGGCTGCTATGTAGTTGGAAGTTGTGGCTCAAGCCAAAAAGTTGATCTTTTGAGGAATAAGCTTGGGTTTGATGAAGCGTTTAACTACAAGGAAGAGCCAGACCTGGGTGCAGCTTTGAAAAGGTACTTTCCTCAAGGCATTGACATTTACTTTGATAATGTGGGAGGGGACATGCTTGATGCAGCACTTGTTAACATGAAAATTCATGGTCGAATTGCTGTTTGTGGAATGGTGTCTGAGAAAAACCTCTCTGATCCCCAGGGCATCCGCAACGTATACAATCTCATAACAAAGCGTATCAGGATGCAGGGATTCCTGCAAAGTGATTACATACACTTGTTCCCACGCTTCTTGGAACATGTCATTAGTTACTACAAGCAAGGTAAGATTGTTTACATCGAAGACATGAATGAAGGCTTGGAAAGTGCTCCATCTGCTTTTGTTGGGCTATTTTTGGGAGAAAATGTTGGTAAGCAAGTCATTCGTGTAGCCCATGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ADH_N_2 ADH_zinc_N

Protein Analysis

351

Amino Acids

38.8

Weight (kDa)

5.88

Isoelectric Point (pI)

38.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017133)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_6g00020
malus_domestica MD12G1260900.v1.1
prunus_persica Prupe.6G365900_v2.0.a1
pyrus_communis pycom12g24290
rosa_chinensis RchiOBHm_Chr3g0447341
rosa_laevigata RLG00000026009
rosa_roxburghii Rroxscaffold_6G00425520
rosa_rugosa Rorug02G0600100
rosa_samantha Rh3AG000400 Rh3CG000200 Rh3DG000400
rosa_wichuraiana Rw3G000020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 828
AciI CCGC 2 cut(s) 196, 820
AclWI GGATC 2 cut(s) 332, 800
AcoI YGGCCR 2 cut(s) 241, 532
AcsI RAATTY 1 cut(s) 753
AcuI CTGAAG 1 cut(s) 492
AfaI GTAC 2 cut(s) 21, 677
AfiI CCNNNNNNNGG 4 cut(s) 134, 254, 479, 656
AflIII ACRYGT 1 cut(s) 910
AgsI TTSAA 2 cut(s) 301, 670
AjnI CCWGG 5 cut(s) 238, 304, 430, 654, 810
AjuI GAANNNNNNNTTGG 2 cut(s) 953, 985
AluBI AGCT 7 cut(s) 118, 125, 348, 367, 526, 613, 665
AluI AGCT 7 cut(s) 118, 125, 348, 367, 526, 613, 665
Alw21I GWGCWC 1 cut(s) 982
Alw26I GTCTC 2 cut(s) 74, 271
AlwI GGATC 2 cut(s) 332, 800
AoxI GGCC 3 cut(s) 193, 241, 532
ApeKI GCWGC 5 cut(s) 503, 523, 555, 662, 734
ApoI RAATTY 1 cut(s) 753
ArsI GACNNNNNNTTYG 2 cut(s) 686, 718
AspLEI GCGC 1 cut(s) 146
AspS9I GGNCC 1 cut(s) 193
AsuHPI GGTGA 1 cut(s) 319
BalI TGGCCA 2 cut(s) 243, 534
BbsI GAAGAC 2 cut(s) 410, 960
Bbv12I GWGCWC 1 cut(s) 982
BbvI GCAGC 5 cut(s) 490, 535, 542, 674, 746
BccI CCATC 3 cut(s) 91, 327, 991
BceAI ACGGC 1 cut(s) 500
BcgI CGANNNNNNTGC 2 cut(s) 1016, 1050
BciT130I CCWGG 5 cut(s) 240, 306, 432, 656, 812
BcoDI GTCTC 2 cut(s) 74, 271
BfaI CTAG 1 cut(s) 17
BfoI RGCGCY 1 cut(s) 147
BisI GCNGC 6 cut(s) 196, 504, 524, 556, 663, 735
BlsI GCNGC 6 cut(s) 197, 505, 525, 557, 664, 736
Bme1390I CCNGG 5 cut(s) 240, 306, 432, 656, 812
BmgT120I GGNCC 1 cut(s) 193
BmiI GGNNCC 2 cut(s) 194, 514
BmrFI CCNGG 5 cut(s) 240, 306, 432, 656, 812
BmsI GCATC 3 cut(s) 721, 825, 846
BpiI GAAGAC 2 cut(s) 410, 960
BplI GAGNNNNNCTC 2 cut(s) 452, 484
BpuEI CTTGAG 2 cut(s) 565, 669
BsaJI CCNNGG 4 cut(s) 253, 655, 810, 811
BsaWI WCCGGW 1 cut(s) 329
BsaXI ACNNNNNCTCC 2 cut(s) 1002, 1032
Bsc4I CCNNNNNNNGG 4 cut(s) 134, 254, 479, 656
Bse1I ACTGG 1 cut(s) 543
BseBI CCWGG 5 cut(s) 240, 306, 432, 656, 812
BseDI CCNNGG 4 cut(s) 253, 655, 810, 811
BseGI GGATG 4 cut(s) 338, 393, 816, 861
BseLI CCNNNNNNNGG 4 cut(s) 134, 254, 479, 656
BseMII CTCAG 3 cut(s) 333, 354, 780
BseNI ACTGG 1 cut(s) 543
BseRI GAGGAG 1 cut(s) 117
BseXI GCAGC 5 cut(s) 490, 535, 542, 674, 746
BsgI GTGCAG 1 cut(s) 681
BshFI GGCC 3 cut(s) 195, 243, 534
BsiHKAI GWGCWC 1 cut(s) 982
BsiSI CCGG 1 cut(s) 330
BslFI GGGAC 1 cut(s) 734
BslI CCNNNNNNNGG 4 cut(s) 134, 254, 479, 656
BsmAI GTCTC 2 cut(s) 74, 271
BsmFI GGGAC 1 cut(s) 734
BsnI GGCC 3 cut(s) 195, 243, 534
Bsp1286I GDGCHC 1 cut(s) 982
Bsp143I GATC 3 cut(s) 324, 595, 805
BspACI CCGC 2 cut(s) 196, 820
BspANI GGCC 3 cut(s) 195, 243, 534
BspCNI CTCAG 3 cut(s) 332, 355, 781
BspLI GGNNCC 2 cut(s) 194, 514
BspPI GGATC 2 cut(s) 332, 800
BspQI GCTCTTC 1 cut(s) 639
BsrI ACTGG 1 cut(s) 543
BssECI CCNNGG 4 cut(s) 253, 655, 810, 811
BssMI GATC 3 cut(s) 324, 595, 805
BssNAI GTATAC 1 cut(s) 829
BssT1I CCWWGG 1 cut(s) 253
Bst1107I GTATAC 1 cut(s) 829
Bst2UI CCWGG 5 cut(s) 240, 306, 432, 656, 812
Bst6I CTCTTC 2 cut(s) 24, 639
BstC8I GCNNGC 2 cut(s) 200, 245
BstDEI CTNAG 4 cut(s) 319, 363, 474, 789
BstENI CCTNNNNNAGG 2 cut(s) 132, 477
BstF5I GGATG 4 cut(s) 338, 393, 816, 861
BstH2I RGCGCY 1 cut(s) 147
BstHHI GCGC 1 cut(s) 146
BstKTI GATC 3 cut(s) 327, 598, 808
BstMAI GTCTC 2 cut(s) 74, 271
BstMBI GATC 3 cut(s) 324, 595, 805
BstMWI GCNNNNNNNGC 2 cut(s) 512, 986
BstNI CCWGG 5 cut(s) 240, 306, 432, 656, 812
BstNSI RCATGY 3 cut(s) 202, 727, 914
BstSCI CCNGG 5 cut(s) 238, 304, 430, 654, 810
BstV1I GCAGC 5 cut(s) 490, 535, 542, 674, 746
BstV2I GAAGAC 2 cut(s) 410, 960
BstXI CCANNNNNNTGG 2 cut(s) 260, 277
BstZ17I GTATAC 1 cut(s) 829
BsuRI GGCC 3 cut(s) 195, 243, 534
BtsCI GGATG 4 cut(s) 338, 393, 816, 861
Cac8I GCNNGC 2 cut(s) 200, 245
CfoI GCGC 1 cut(s) 146
Cfr13I GGNCC 1 cut(s) 193
Csp6I GTAC 2 cut(s) 20, 676
CspCI CAANNNNNGTGG 2 cut(s) 885, 920
CviAII CATG 9 cut(s) 199, 410, 551, 724, 748, 758, 911, 958, 1046
CviQI GTAC 2 cut(s) 20, 676
DdeI CTNAG 4 cut(s) 319, 363, 474, 789
DpnI GATC 3 cut(s) 326, 597, 807
DpnII GATC 3 cut(s) 324, 595, 805
EaeI YGGCCR 2 cut(s) 241, 532
Eam1104I CTCTTC 2 cut(s) 24, 639
EarI CTCTTC 2 cut(s) 24, 639
Eco130I CCWWGG 1 cut(s) 253
Eco57I CTGAAG 1 cut(s) 492
EcoNI CCTNNNNNAGG 2 cut(s) 132, 477
EcoRII CCWGG 5 cut(s) 238, 304, 430, 654, 810
EcoT14I CCWWGG 1 cut(s) 253
ErhI CCWWGG 1 cut(s) 253
FaeI CATG 9 cut(s) 202, 413, 554, 727, 751, 761, 914, 961, 1049
FalI AAGNNNNNCTT 2 cut(s) 582, 614
FaqI GGGAC 1 cut(s) 734
FatI CATG 9 cut(s) 198, 409, 550, 723, 747, 757, 910, 957, 1045
FauNDI CATATG 1 cut(s) 445
FblI GTMKAC 1 cut(s) 828
Fnu4HI GCNGC 6 cut(s) 196, 504, 524, 556, 663, 735
FokI GGATG 4 cut(s) 345, 380, 803, 868
Fsp4HI GCNGC 6 cut(s) 196, 504, 524, 556, 663, 735
FspBI CTAG 1 cut(s) 17
GlaI GCGC 1 cut(s) 145
GluI GCNGC 6 cut(s) 196, 504, 524, 556, 663, 735
HaeII RGCGCY 1 cut(s) 147
HaeIII GGCC 3 cut(s) 195, 243, 534
HapII CCGG 1 cut(s) 330
HhaI GCGC 1 cut(s) 146
Hin1II CATG 9 cut(s) 202, 413, 554, 727, 751, 761, 914, 961, 1049
Hin6I GCGC 1 cut(s) 144
HinP1I GCGC 1 cut(s) 144
HincII GTYRAC 1 cut(s) 745
HindII GTYRAC 1 cut(s) 745
HindIII AAGCTT 1 cut(s) 611
HinfI GANTC 7 cut(s) 160, 215, 281, 352, 453, 485, 864
HpaI GTTAAC 1 cut(s) 745
HpaII CCGG 1 cut(s) 330
HphI GGTGA 1 cut(s) 319
Hpy166II GTNNAC 3 cut(s) 745, 829, 946
Hpy188I TCNGA 3 cut(s) 286, 790, 805
Hpy188III TCNNGA 4 cut(s) 157, 372, 510, 853
Hpy8I GTNNAC 3 cut(s) 745, 829, 946
HpyAV CCTTC 2 cut(s) 245, 959
HpyCH4IV ACGT 1 cut(s) 825
HpyCH4V TGCA 8 cut(s) 91, 443, 449, 550, 662, 734, 859, 871
HpyF10VI GCNNNNNNNGC 2 cut(s) 512, 986
HpyF3I CTNAG 4 cut(s) 319, 363, 474, 789
HpySE526I ACGT 1 cut(s) 825
Hsp92II CATG 9 cut(s) 202, 413, 554, 727, 751, 761, 914, 961, 1049
HspAI GCGC 1 cut(s) 144
KspAI GTTAAC 1 cut(s) 745
Kzo9I GATC 3 cut(s) 324, 595, 805
LguI GCTCTTC 1 cut(s) 639
LmnI GCTCC 4 cut(s) 130, 473, 512, 985
Lsp1109I GCAGC 5 cut(s) 490, 535, 542, 674, 746
LweI GCATC 3 cut(s) 721, 825, 846
MaeI CTAG 1 cut(s) 17
MaeII ACGT 1 cut(s) 825
MaeIII GTNAC 2 cut(s) 176, 920
MalI GATC 3 cut(s) 326, 597, 807
MboI GATC 3 cut(s) 324, 595, 805
MboII GAAGA 9 cut(s) 17, 20, 41, 118, 121, 350, 410, 656, 965
MhlI GDGCHC 1 cut(s) 982
MlsI TGGCCA 2 cut(s) 243, 534
MluCI AATT 5 cut(s) 295, 378, 545, 753, 765
MluNI TGGCCA 2 cut(s) 243, 534
MlyI GAGTC 1 cut(s) 209
MmeI TCCRAC 1 cut(s) 547
Mox20I TGGCCA 2 cut(s) 243, 534
MscI TGGCCA 2 cut(s) 243, 534
MseI TTAA 4 cut(s) 120, 381, 633, 744
Msp20I TGGCCA 2 cut(s) 243, 534
MspI CCGG 1 cut(s) 330
MspR9I CCNGG 5 cut(s) 240, 306, 432, 656, 812
MvaI CCWGG 5 cut(s) 240, 306, 432, 656, 812
MwoI GCNNNNNNNGC 2 cut(s) 512, 986
NdeI CATATG 1 cut(s) 445
NdeII GATC 3 cut(s) 324, 595, 805
NlaIII CATG 9 cut(s) 202, 413, 554, 727, 751, 761, 914, 961, 1049
NlaIV GGNNCC 2 cut(s) 194, 514
NmuCI GTSAC 1 cut(s) 176
NspI RCATGY 3 cut(s) 202, 727, 914
PaeI GCATGC 1 cut(s) 202
PasI CCCWGGG 1 cut(s) 811
PciI ACATGT 1 cut(s) 910
PciSI GCTCTTC 1 cut(s) 639
PfeI GAWTC 6 cut(s) 160, 281, 352, 453, 485, 864
PkrI GCNGC 6 cut(s) 197, 505, 525, 557, 664, 736
PleI GAGTC 1 cut(s) 209
PpsI GAGTC 1 cut(s) 209
PscI ACATGT 1 cut(s) 910
Psp6I CCWGG 5 cut(s) 238, 304, 430, 654, 810
PspGI CCWGG 5 cut(s) 238, 304, 430, 654, 810
PspN4I GGNNCC 2 cut(s) 194, 514
PspPI GGNCC 1 cut(s) 193
RsaI GTAC 2 cut(s) 21, 677
RsaNI GTAC 2 cut(s) 20, 676
SapI GCTCTTC 1 cut(s) 639
SaqAI TTAA 4 cut(s) 120, 381, 633, 744
SatI GCNGC 6 cut(s) 196, 504, 524, 556, 663, 735
Sau3AI GATC 3 cut(s) 324, 595, 805
Sau96I GGNCC 1 cut(s) 193
SchI GAGTC 1 cut(s) 209
ScrFI CCNGG 5 cut(s) 240, 306, 432, 656, 812
SduI GDGCHC 1 cut(s) 982
SfaNI GCATC 3 cut(s) 721, 825, 846
SmlI CTYRAG 2 cut(s) 580, 684
SmoI CTYRAG 2 cut(s) 580, 684
SphI GCATGC 1 cut(s) 202
Sse9I AATT 5 cut(s) 295, 378, 545, 753, 765
SsiI CCGC 2 cut(s) 196, 820
SspMI CTAG 1 cut(s) 17
StyD4I CCNGG 5 cut(s) 238, 304, 430, 654, 810
StyI CCWWGG 1 cut(s) 253
TaiI ACGT 1 cut(s) 828
TaqI TCGA 3 cut(s) 371, 763, 951
TasI AATT 5 cut(s) 295, 378, 545, 753, 765
TatI WGTACW 1 cut(s) 19
TauI GCSGC 1 cut(s) 198
TfiI GAWTC 6 cut(s) 160, 281, 352, 453, 485, 864
Tru1I TTAA 4 cut(s) 120, 381, 633, 744
Tru9I TTAA 4 cut(s) 120, 381, 633, 744
TseFI GTSAC 1 cut(s) 176
TseI GCWGC 5 cut(s) 503, 523, 555, 662, 734
Tsp45I GTSAC 1 cut(s) 176
TspDTI ATGAA 7 cut(s) 49, 304, 639, 746, 764, 974, 978
XagI CCTNNNNNAGG 2 cut(s) 132, 477
XapI RAATTY 1 cut(s) 753
XceI RCATGY 3 cut(s) 202, 727, 914
XmiI GTMKAC 1 cut(s) 828
XspI CTAG 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.