Prupe.7G015400_v2.0.a1

Histone acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0017400
Physical Location & Seq
Forward (+)
2232151 .. 2236311
4161 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G015400.1

Sequence Viewer

Length: 414 bp
ATGGCGGACCACGATTGCAAAGACTTGGATATGGGTTTTGGCTCTGACCGATCACAAATTTTTAATCTTTGGATGAGCAGCATGAATACCCCTGTGATGGTTGAATTGGAGGGTGAGACTCACCCACCTGAGGGTAGGAGTTCTCCAGCAAGTGCTTTGGAGATTAGGAAAATTCTTGATGTTCTGATGCACGCATCAAAATGTCCTTTAGCTCCTGCCTCACAATGTCAGTACCCCAATTGTCGTAAGATTAAGGGGCTTTTCCGCCATGGAATTCAATGTGAGGACCGTGTATCTGGAGGATGTGTTCTCTGTCAGAAGATGTGGTATGCCCTTCTACTTCATGCTCCCTTCTACTTCATGCTCGAGCTTGCAAAGAATCTGAGTGCCATGTGCCACGTTGCAGCGATTTAA

Protein Analysis

138

Amino Acids

15.3

Weight (kDa)

6.57

Isoelectric Point (pI)

55.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017400)

Species Orthologous Gene IDs
prunus_persica Prupe.7G015400_v2.0.a1 Prupe.7G015400_v2.0.a1
pyrus_communis pycom17g15050
rosa_chinensis RchiOBHm_Chr2g0149711
rosa_laevigata RLG00000020441
rosa_multiflora Rmu_co8319157.1_g000001
rosa_roxburghii Rroxscaffold_2G00097770
rosa_rugosa Rorug02G0415400 Rorug02G0415500
rosa_samantha Rh2AG475300 Rh2BG486700 Rh2CG460800
rosa_wichuraiana Rw2G038730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 5, 265
AcsI RAATTY 3 cut(s) 57, 171, 273
AfaI GTAC 1 cut(s) 233
AfiI CCNNNNNNNGG 3 cut(s) 97, 130, 131
AgsI TTSAA 2 cut(s) 104, 278
AloI GAACNNNNNNTCC 2 cut(s) 291, 323
AluBI AGCT 2 cut(s) 212, 370
AluI AGCT 2 cut(s) 212, 370
Alw26I GTCTC 1 cut(s) 110
Ama87I CYCGRG 1 cut(s) 365
ApeKI GCWGC 2 cut(s) 78, 404
ApoI RAATTY 3 cut(s) 57, 171, 273
AspS9I GGNCC 2 cut(s) 7, 286
AsuHPI GGTGA 2 cut(s) 113, 125
AvaI CYCGRG 1 cut(s) 365
AvaII GGWCC 2 cut(s) 7, 286
AxyI CCTNAGG 1 cut(s) 129
BbvI GCAGC 1 cut(s) 90
BccI CCATC 1 cut(s) 91
BcoDI GTCTC 1 cut(s) 110
BisI GCNGC 2 cut(s) 79, 405
BlsI GCNGC 2 cut(s) 80, 406
Bme18I GGWCC 2 cut(s) 7, 286
BmeT110I CYCGRG 1 cut(s) 365
BmgT120I GGNCC 2 cut(s) 7, 286
BmsI GCATC 2 cut(s) 177, 203
BpmI CTGGAG 2 cut(s) 129, 318
BsaJI CCNNGG 1 cut(s) 268
BsaXI ACNNNNNCTCC 2 cut(s) 291, 321
Bsc4I CCNNNNNNNGG 3 cut(s) 97, 130, 131
Bse21I CCTNAGG 1 cut(s) 129
BseDI CCNNGG 1 cut(s) 268
BseGI GGATG 2 cut(s) 78, 308
BseLI CCNNNNNNNGG 3 cut(s) 97, 130, 131
BseMII CTCAG 2 cut(s) 120, 374
BseXI GCAGC 1 cut(s) 90
BsiHKCI CYCGRG 1 cut(s) 365
BslI CCNNNNNNNGG 3 cut(s) 97, 130, 131
BsmAI GTCTC 1 cut(s) 110
BsoBI CYCGRG 1 cut(s) 365
Bsp143I GATC 1 cut(s) 50
Bsp19I CCATGG 1 cut(s) 268
BspACI CCGC 2 cut(s) 5, 265
BspCNI CTCAG 2 cut(s) 121, 375
BssECI CCNNGG 1 cut(s) 268
BssMI GATC 1 cut(s) 50
BssT1I CCWWGG 1 cut(s) 268
Bst4CI ACNGT 1 cut(s) 290
BstC8I GCNNGC 2 cut(s) 192, 372
BstDEI CTNAG 2 cut(s) 129, 383
BstDSI CCRYGG 1 cut(s) 268
BstF5I GGATG 2 cut(s) 78, 308
BstKTI GATC 1 cut(s) 53
BstMAI GTCTC 1 cut(s) 110
BstMBI GATC 1 cut(s) 50
BstV1I GCAGC 1 cut(s) 90
Bsu36I CCTNAGG 1 cut(s) 129
BtgI CCRYGG 1 cut(s) 268
BtsCI GGATG 2 cut(s) 78, 308
Cac8I GCNNGC 2 cut(s) 192, 372
Cfr13I GGNCC 2 cut(s) 7, 286
Csp6I GTAC 1 cut(s) 232
CviAII CATG 5 cut(s) 82, 269, 344, 361, 391
CviJI RGCY 4 cut(s) 42, 212, 259, 370
CviKI_1 RGCY 4 cut(s) 42, 212, 259, 370
CviQI GTAC 1 cut(s) 232
DdeI CTNAG 2 cut(s) 129, 383
DpnI GATC 1 cut(s) 52
DpnII GATC 1 cut(s) 50
EciI GGCGGA 2 cut(s) 20, 254
Eco130I CCWWGG 1 cut(s) 268
Eco47I GGWCC 2 cut(s) 7, 286
Eco81I CCTNAGG 1 cut(s) 129
Eco88I CYCGRG 1 cut(s) 365
EcoRI GAATTC 1 cut(s) 273
EcoT14I CCWWGG 1 cut(s) 268
ErhI CCWWGG 1 cut(s) 268
FaeI CATG 5 cut(s) 85, 272, 347, 364, 394
FaiI YATR 7 cut(s) 32, 83, 270, 330, 345, 362, 392
FatI CATG 5 cut(s) 81, 268, 343, 360, 390
Fnu4HI GCNGC 2 cut(s) 79, 405
FokI GGATG 2 cut(s) 85, 315
Fsp4HI GCNGC 2 cut(s) 79, 405
GluI GCNGC 2 cut(s) 79, 405
GsuI CTGGAG 2 cut(s) 129, 318
Hin1II CATG 5 cut(s) 85, 272, 347, 364, 394
HinfI GANTC 2 cut(s) 118, 379
HphI GGTGA 2 cut(s) 113, 125
Hpy188I TCNGA 4 cut(s) 46, 186, 318, 384
Hpy188III TCNNGA 2 cut(s) 176, 297
HpyAV CCTTC 2 cut(s) 344, 361
HpyCH4III ACNGT 1 cut(s) 290
HpyCH4IV ACGT 1 cut(s) 399
HpyCH4V TGCA 4 cut(s) 18, 190, 374, 404
HpyF3I CTNAG 2 cut(s) 129, 383
HpySE526I ACGT 1 cut(s) 399
Hsp92II CATG 5 cut(s) 85, 272, 347, 364, 394
Kzo9I GATC 1 cut(s) 50
LmnI GCTCC 2 cut(s) 217, 352
LpnPI CCDG 5 cut(s) 105, 141, 159, 228, 282
Lsp1109I GCAGC 1 cut(s) 90
LweI GCATC 2 cut(s) 177, 203
MaeII ACGT 1 cut(s) 399
MalI GATC 1 cut(s) 52
MboI GATC 1 cut(s) 50
MboII GAAGA 1 cut(s) 331
MfeI CAATTG 1 cut(s) 238
MluCI AATT 5 cut(s) 57, 104, 171, 238, 273
MlyI GAGTC 1 cut(s) 112
MnlI CCTC 5 cut(s) 103, 124, 229, 277, 293
MseI TTAA 3 cut(s) 63, 252, 412
MslI CAYNNNNRTG 1 cut(s) 199
MunI CAATTG 1 cut(s) 238
NcoI CCATGG 1 cut(s) 268
NdeII GATC 1 cut(s) 50
NlaIII CATG 5 cut(s) 85, 272, 347, 364, 394
PaeR7I CTCGAG 1 cut(s) 365
PfeI GAWTC 1 cut(s) 379
PkrI GCNGC 2 cut(s) 80, 406
PleI GAGTC 1 cut(s) 112
PpsI GAGTC 1 cut(s) 112
PspPI GGNCC 2 cut(s) 7, 286
PspXI VCTCGAGB 1 cut(s) 365
RsaI GTAC 1 cut(s) 233
RsaNI GTAC 1 cut(s) 232
RseI CAYNNNNRTG 1 cut(s) 199
SaqAI TTAA 3 cut(s) 63, 252, 412
SatI GCNGC 2 cut(s) 79, 405
Sau3AI GATC 1 cut(s) 50
Sau96I GGNCC 2 cut(s) 7, 286
SchI GAGTC 1 cut(s) 112
SetI ASST 4 cut(s) 130, 214, 372, 402
SfaNI GCATC 2 cut(s) 177, 203
Sfr274I CTCGAG 1 cut(s) 365
SinI GGWCC 2 cut(s) 7, 286
SlaI CTCGAG 1 cut(s) 365
SmiMI CAYNNNNRTG 1 cut(s) 199
SmlI CTYRAG 1 cut(s) 365
SmoI CTYRAG 1 cut(s) 365
Sse9I AATT 5 cut(s) 57, 104, 171, 238, 273
SsiI CCGC 2 cut(s) 5, 265
StyI CCWWGG 1 cut(s) 268
TaaI ACNGT 1 cut(s) 290
TaiI ACGT 1 cut(s) 402
TaqI TCGA 1 cut(s) 366
TaqII GACCGA 1 cut(s) 63
TasI AATT 5 cut(s) 57, 104, 171, 238, 273
TfiI GAWTC 1 cut(s) 379
Tru1I TTAA 3 cut(s) 63, 252, 412
Tru9I TTAA 3 cut(s) 63, 252, 412
TseI GCWGC 2 cut(s) 78, 404
TspDTI ATGAA 3 cut(s) 98, 332, 349
VpaK11BI GGWCC 2 cut(s) 7, 286
XapI RAATTY 3 cut(s) 57, 171, 273
XhoI CTCGAG 1 cut(s) 365
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.