Zinc finger protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g21782 |
| malus_domestica | MD04G1139700.v1.1 MD12G1054400.v1.1 MD14G1053400.v1.1 |
| prunus_persica | Prupe.7G082300_v2.0.a1 |
| rosa_laevigata | RLG00000023601 |
| rosa_multiflora | Rmu_sc0012914.1_g000004 |
| rosa_roxburghii | Rroxscaffold_6G00402610 |
| rosa_rugosa | Rorug03G0171600 |
| rosa_samantha | Rh3DG247600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 317 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 457 |
| AccBSI | CCGCTC | 1 cut(s) | 256 |
| AccII | CGCG | 1 cut(s) | 276 |
| AciI | CCGC | 7 cut(s) | 42, 247, 256, 408, 467, 522, 556 |
| AclWI | GGATC | 1 cut(s) | 514 |
| AcuI | CTGAAG | 2 cut(s) | 585, 807 |
| AfaI | GTAC | 5 cut(s) | 179, 187, 608, 743, 775 |
| AfeI | AGCGCT | 1 cut(s) | 287 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 128, 457, 566, 661 |
| AflII | CTTAAG | 1 cut(s) | 799 |
| AgsI | TTSAA | 2 cut(s) | 96, 631 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 644, 676 |
| AluBI | AGCT | 6 cut(s) | 26, 33, 144, 359, 660, 793 |
| AluI | AGCT | 6 cut(s) | 26, 33, 144, 359, 660, 793 |
| Alw26I | GTCTC | 2 cut(s) | 333, 809 |
| AlwI | GGATC | 1 cut(s) | 514 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 338 |
| Aor51HI | AGCGCT | 1 cut(s) | 287 |
| AoxI | GGCC | 3 cut(s) | 219, 229, 557 |
| ApeKI | GCWGC | 2 cut(s) | 280, 283 |
| AspLEI | GCGC | 1 cut(s) | 288 |
| AspS9I | GGNCC | 2 cut(s) | 18, 220 |
| AsuHPI | GGTGA | 6 cut(s) | 52, 111, 176, 236, 587, 692 |
| AvaII | GGWCC | 1 cut(s) | 18 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 590, 622 |
| BbsI | GAAGAC | 1 cut(s) | 196 |
| BbvCI | CCTCAGC | 2 cut(s) | 22, 140 |
| BbvI | GCAGC | 2 cut(s) | 292, 295 |
| BccI | CCATC | 5 cut(s) | 91, 339, 566, 572, 728 |
| BceAI | ACGGC | 1 cut(s) | 395 |
| BcoDI | GTCTC | 2 cut(s) | 333, 809 |
| BfaI | CTAG | 1 cut(s) | 645 |
| BfoI | RGCGCY | 1 cut(s) | 289 |
| BfrI | CTTAAG | 1 cut(s) | 799 |
| BisI | GCNGC | 3 cut(s) | 281, 284, 557 |
| BlsI | GCNGC | 3 cut(s) | 282, 285, 558 |
| BmcAI | AGTACT | 3 cut(s) | 179, 608, 775 |
| Bme18I | GGWCC | 1 cut(s) | 18 |
| BmgT120I | GGNCC | 2 cut(s) | 18, 220 |
| BmiI | GGNNCC | 2 cut(s) | 110, 550 |
| BmsI | GCATC | 2 cut(s) | 367, 630 |
| BoxI | GACNNNNGTC | 1 cut(s) | 801 |
| BpiI | GAAGAC | 1 cut(s) | 196 |
| BpmI | CTGGAG | 1 cut(s) | 315 |
| Bpu10I | CCTNAGC | 3 cut(s) | 22, 140, 656 |
| BpuEI | CTTGAG | 1 cut(s) | 19 |
| BsaBI | GATNNNNATC | 2 cut(s) | 477, 511 |
| BsaJI | CCNNGG | 1 cut(s) | 223 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 128, 457, 566, 661 |
| Bse1I | ACTGG | 1 cut(s) | 516 |
| Bse8I | GATNNNNATC | 2 cut(s) | 477, 511 |
| BseDI | CCNNGG | 1 cut(s) | 223 |
| BseGI | GGATG | 3 cut(s) | 512, 625, 739 |
| BseJI | GATNNNNATC | 2 cut(s) | 477, 511 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 128, 457, 566, 661 |
| BseMII | CTCAG | 4 cut(s) | 36, 154, 230, 647 |
| BseNI | ACTGG | 1 cut(s) | 516 |
| BseRI | GAGGAG | 1 cut(s) | 629 |
| BseXI | GCAGC | 2 cut(s) | 292, 295 |
| BseYI | CCCAGC | 2 cut(s) | 355, 491 |
| Bsh1236I | CGCG | 1 cut(s) | 276 |
| BshFI | GGCC | 3 cut(s) | 221, 231, 559 |
| BslFI | GGGAC | 1 cut(s) | 323 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 128, 457, 566, 661 |
| BsmAI | GTCTC | 2 cut(s) | 333, 809 |
| BsmFI | GGGAC | 1 cut(s) | 323 |
| BsmI | GAATGC | 1 cut(s) | 265 |
| BsnI | GGCC | 3 cut(s) | 221, 231, 559 |
| Bsp143I | GATC | 2 cut(s) | 506, 685 |
| Bsp68I | TCGCGA | 1 cut(s) | 276 |
| BspACI | CCGC | 7 cut(s) | 42, 247, 256, 408, 467, 522, 556 |
| BspANI | GGCC | 3 cut(s) | 221, 231, 559 |
| BspCNI | CTCAG | 4 cut(s) | 35, 153, 229, 648 |
| BspFNI | CGCG | 1 cut(s) | 276 |
| BspHI | TCATGA | 1 cut(s) | 387 |
| BspLI | GGNNCC | 2 cut(s) | 110, 550 |
| BspPI | GGATC | 1 cut(s) | 514 |
| BspQI | GCTCTTC | 1 cut(s) | 783 |
| BspTI | CTTAAG | 1 cut(s) | 799 |
| BsrBI | CCGCTC | 1 cut(s) | 256 |
| BsrI | ACTGG | 1 cut(s) | 516 |
| BssECI | CCNNGG | 1 cut(s) | 223 |
| BssMI | GATC | 2 cut(s) | 506, 685 |
| Bst4CI | ACNGT | 1 cut(s) | 154 |
| Bst6I | CTCTTC | 1 cut(s) | 783 |
| BstAFI | CTTAAG | 1 cut(s) | 799 |
| BstC8I | GCNNGC | 3 cut(s) | 136, 274, 278 |
| BstDEI | CTNAG | 5 cut(s) | 22, 140, 216, 603, 656 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 564 |
| BstF5I | GGATG | 3 cut(s) | 512, 625, 739 |
| BstFNI | CGCG | 1 cut(s) | 276 |
| BstH2I | RGCGCY | 1 cut(s) | 289 |
| BstHHI | GCGC | 1 cut(s) | 288 |
| BstKTI | GATC | 2 cut(s) | 509, 688 |
| BstMAI | GTCTC | 2 cut(s) | 333, 809 |
| BstMBI | GATC | 2 cut(s) | 506, 685 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 269, 356 |
| BstNSI | RCATGY | 1 cut(s) | 138 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 801 |
| BstUI | CGCG | 1 cut(s) | 276 |
| BstV1I | GCAGC | 2 cut(s) | 292, 295 |
| BstV2I | GAAGAC | 1 cut(s) | 196 |
| BsuRI | GGCC | 3 cut(s) | 221, 231, 559 |
| BtgZI | GCGATG | 1 cut(s) | 585 |
| BtsCI | GGATG | 3 cut(s) | 512, 625, 739 |
| BtsIMutI | CAGTG | 1 cut(s) | 523 |
| BtuMI | TCGCGA | 1 cut(s) | 276 |
| Cac8I | GCNNGC | 3 cut(s) | 136, 274, 278 |
| CaiI | CAGNNNCTG | 1 cut(s) | 338 |
| CciI | TCATGA | 1 cut(s) | 387 |
| CfoI | GCGC | 1 cut(s) | 288 |
| Cfr13I | GGNCC | 2 cut(s) | 18, 220 |
| Csp6I | GTAC | 5 cut(s) | 178, 186, 607, 742, 774 |
| CviAII | CATG | 5 cut(s) | 135, 183, 388, 457, 527 |
| CviQI | GTAC | 5 cut(s) | 178, 186, 607, 742, 774 |
| DdeI | CTNAG | 5 cut(s) | 22, 140, 216, 603, 656 |
| DpnI | GATC | 2 cut(s) | 508, 687 |
| DpnII | GATC | 2 cut(s) | 506, 685 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 317 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 317 |
| Eam1104I | CTCTTC | 1 cut(s) | 783 |
| EarI | CTCTTC | 1 cut(s) | 783 |
| EciI | GGCGGA | 1 cut(s) | 397 |
| Eco47I | GGWCC | 1 cut(s) | 18 |
| Eco47III | AGCGCT | 1 cut(s) | 287 |
| Eco57I | CTGAAG | 2 cut(s) | 585, 807 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 564 |
| EcoO109I | RGGNCCY | 2 cut(s) | 18, 220 |
| FaeI | CATG | 5 cut(s) | 138, 186, 391, 460, 530 |
| FaqI | GGGAC | 1 cut(s) | 323 |
| FatI | CATG | 5 cut(s) | 134, 182, 387, 456, 526 |
| FauI | CCCGC | 1 cut(s) | 460 |
| Fnu4HI | GCNGC | 3 cut(s) | 281, 284, 557 |
| FokI | GGATG | 3 cut(s) | 499, 632, 746 |
| Fsp4HI | GCNGC | 3 cut(s) | 281, 284, 557 |
| FspBI | CTAG | 1 cut(s) | 645 |
| GlaI | GCGC | 1 cut(s) | 287 |
| GluI | GCNGC | 3 cut(s) | 281, 284, 557 |
| GsaI | CCCAGC | 2 cut(s) | 359, 495 |
| GsuI | CTGGAG | 1 cut(s) | 315 |
| HaeII | RGCGCY | 1 cut(s) | 289 |
| HaeIII | GGCC | 3 cut(s) | 221, 231, 559 |
| HhaI | GCGC | 1 cut(s) | 288 |
| Hin1II | CATG | 5 cut(s) | 138, 186, 391, 460, 530 |
| Hin6I | GCGC | 1 cut(s) | 286 |
| HinP1I | GCGC | 1 cut(s) | 286 |
| HincII | GTYRAC | 1 cut(s) | 415 |
| HindII | GTYRAC | 1 cut(s) | 415 |
| HinfI | GANTC | 3 cut(s) | 92, 167, 713 |
| HphI | GGTGA | 6 cut(s) | 52, 111, 176, 236, 587, 692 |
| Hpy166II | GTNNAC | 1 cut(s) | 415 |
| Hpy188I | TCNGA | 4 cut(s) | 227, 690, 712, 718 |
| Hpy188III | TCNNGA | 5 cut(s) | 275, 332, 388, 546, 563 |
| Hpy8I | GTNNAC | 1 cut(s) | 415 |
| HpyAV | CCTTC | 3 cut(s) | 560, 592, 625 |
| HpyCH4III | ACNGT | 1 cut(s) | 154 |
| HpyCH4IV | ACGT | 1 cut(s) | 372 |
| HpyCH4V | TGCA | 3 cut(s) | 134, 174, 770 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 269, 356 |
| HpyF3I | CTNAG | 5 cut(s) | 22, 140, 216, 603, 656 |
| HpySE526I | ACGT | 1 cut(s) | 372 |
| Hsp92II | CATG | 5 cut(s) | 138, 186, 391, 460, 530 |
| HspAI | GCGC | 1 cut(s) | 286 |
| Kzo9I | GATC | 2 cut(s) | 506, 685 |
| LguI | GCTCTTC | 1 cut(s) | 783 |
| LmnI | GCTCC | 1 cut(s) | 253 |
| Lsp1109I | GCAGC | 2 cut(s) | 292, 295 |
| LweI | GCATC | 2 cut(s) | 367, 630 |
| MaeI | CTAG | 1 cut(s) | 645 |
| MaeII | ACGT | 1 cut(s) | 372 |
| MaeIII | GTNAC | 1 cut(s) | 117 |
| MalI | GATC | 2 cut(s) | 508, 687 |
| MbiI | CCGCTC | 1 cut(s) | 256 |
| MboI | GATC | 2 cut(s) | 506, 685 |
| MboII | GAAGA | 6 cut(s) | 196, 308, 439, 604, 607, 800 |
| MluCI | AATT | 1 cut(s) | 75 |
| MseI | TTAA | 3 cut(s) | 6, 753, 800 |
| MslI | CAYNNNNRTG | 2 cut(s) | 461, 531 |
| MspA1I | CMGCKG | 1 cut(s) | 359 |
| MspCI | CTTAAG | 1 cut(s) | 799 |
| Mva1269I | GAATGC | 1 cut(s) | 265 |
| MvnI | CGCG | 1 cut(s) | 276 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 269, 356 |
| NdeII | GATC | 2 cut(s) | 506, 685 |
| NlaIII | CATG | 5 cut(s) | 138, 186, 391, 460, 530 |
| NlaIV | GGNNCC | 2 cut(s) | 110, 550 |
| NmuCI | GTSAC | 1 cut(s) | 117 |
| NruI | TCGCGA | 1 cut(s) | 276 |
| NspI | RCATGY | 1 cut(s) | 138 |
| PaeI | GCATGC | 1 cut(s) | 138 |
| PagI | TCATGA | 1 cut(s) | 387 |
| PciSI | GCTCTTC | 1 cut(s) | 783 |
| PctI | GAATGC | 1 cut(s) | 265 |
| PfeI | GAWTC | 3 cut(s) | 92, 167, 713 |
| PflFI | GACNNNGTC | 1 cut(s) | 200 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 457 |
| PkrI | GCNGC | 3 cut(s) | 282, 285, 558 |
| PpuMI | RGGWCCY | 1 cut(s) | 18 |
| PshAI | GACNNNNGTC | 1 cut(s) | 801 |
| Psp5II | RGGWCCY | 1 cut(s) | 18 |
| PspFI | CCCAGC | 2 cut(s) | 355, 491 |
| PspN4I | GGNNCC | 2 cut(s) | 110, 550 |
| PspPI | GGNCC | 2 cut(s) | 18, 220 |
| PspPPI | RGGWCCY | 1 cut(s) | 18 |
| PstNI | CAGNNNCTG | 1 cut(s) | 338 |
| PsyI | GACNNNGTC | 1 cut(s) | 200 |
| PvuII | CAGCTG | 1 cut(s) | 359 |
| RruI | TCGCGA | 1 cut(s) | 276 |
| RsaI | GTAC | 5 cut(s) | 179, 187, 608, 743, 775 |
| RsaNI | GTAC | 5 cut(s) | 178, 186, 607, 742, 774 |
| RseI | CAYNNNNRTG | 2 cut(s) | 461, 531 |
| SapI | GCTCTTC | 1 cut(s) | 783 |
| SaqAI | TTAA | 3 cut(s) | 6, 753, 800 |
| SatI | GCNGC | 3 cut(s) | 281, 284, 557 |
| Sau3AI | GATC | 2 cut(s) | 506, 685 |
| Sau96I | GGNCC | 2 cut(s) | 18, 220 |
| ScaI | AGTACT | 3 cut(s) | 179, 608, 775 |
| SfaNI | GCATC | 2 cut(s) | 367, 630 |
| SinI | GGWCC | 1 cut(s) | 18 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 461, 531 |
| SmlI | CTYRAG | 2 cut(s) | 34, 799 |
| SmoI | CTYRAG | 2 cut(s) | 34, 799 |
| SphI | GCATGC | 1 cut(s) | 138 |
| Sse9I | AATT | 1 cut(s) | 75 |
| SsiI | CCGC | 7 cut(s) | 42, 247, 256, 408, 467, 522, 556 |
| SspMI | CTAG | 1 cut(s) | 645 |
| TaaI | ACNGT | 1 cut(s) | 154 |
| TaiI | ACGT | 1 cut(s) | 375 |
| TasI | AATT | 1 cut(s) | 75 |
| TatI | WGTACW | 5 cut(s) | 177, 185, 606, 741, 773 |
| TauI | GCSGC | 1 cut(s) | 559 |
| TfiI | GAWTC | 3 cut(s) | 92, 167, 713 |
| Tru1I | TTAA | 3 cut(s) | 6, 753, 800 |
| Tru9I | TTAA | 3 cut(s) | 6, 753, 800 |
| TscAI | CASTG | 1 cut(s) | 523 |
| TseFI | GTSAC | 1 cut(s) | 117 |
| TseI | GCWGC | 2 cut(s) | 280, 283 |
| Tsp45I | GTSAC | 1 cut(s) | 117 |
| TspDTI | ATGAA | 2 cut(s) | 445, 665 |
| TspGWI | ACGGA | 1 cut(s) | 104 |
| TspRI | CASTG | 1 cut(s) | 523 |
| Tth111I | GACNNNGTC | 1 cut(s) | 200 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 457 |
| Vha464I | CTTAAG | 1 cut(s) | 799 |
| VpaK11BI | GGWCC | 1 cut(s) | 18 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 564 |
| XceI | RCATGY | 1 cut(s) | 138 |
| XspI | CTAG | 1 cut(s) | 645 |
| ZrmI | AGTACT | 3 cut(s) | 179, 608, 775 |