Prupe.7G090400_v2.0.a1

cell redox homeostasis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0006953
Physical Location & Seq
Reverse (-)
12387286 .. 12390985
3700 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G090400.10

Sequence Viewer

Length: 783 bp
ATGGCCAGGAATTCAGTGGTTTTGATACGCCAATTGCTTGGCAATCGCAACCACCCGTGTGCTGCAGGTCGCTCAAACCTATTCGTCATTGAGAGCCTCAGCATCTATTACGATGCACTTGATAAAGTTAAAGATAAACGTATGTCTGCTGTTTTCTTCTACACAGCACCCTTTTGCCGGGGTACCTATCAGTGGATAACTCCAATCTTTGATGAGTTGCGTGAGCAATTCCCACATATAACAATGTTTAAGGTTATCATGGAACAGAATGGCCCTGGACCCACAGTGGATGTGTTTGGAGTTCATCGCAATATGAACACTGGATCCACATTGGACAAGTTGGGAATTCACGAGACGCCAACGTTCCATTGCTATCTAAAGGGGGAAAGGGTACATGAGGTTGCTGGTATTTCCGCCAGACACTTGAAAAAGAGACTTGAAAATGTCTACAATCCATCTGGGATAAAGAAAAAGAGAAGACAAGGTAAGGAAGATGACAAGGATGGAGGAATTGTTGAAGTACTTCCCTGTAGGATTCCTGAAACATCAATTCAGAAAGTGATCTTGGAACTTGAACAATTAGTTTTTGATGAAGATCATCTGAAAGTTGATCTGAATGATCTGGATGATCTGGAACTTGATCAGAAGAGACATGATCAGGACAAGATGTGGTGGTTTGCAAAAGGGTTGGTTTCATGTGAAAAGAAGATGAAGATCTTTTGTAAATTGAAAGATCCTAAAGCCAAGCTCAAATGGATTAAGAGGGAAATGGCTAAGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04621 ko05418 map04621 map05418
Pfam Domains
Protein Families
TPR_16 Thioredoxin

Protein Analysis

261

Amino Acids

30.2

Weight (kDa)

8.99

Isoelectric Point (pI)

35.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 56
Acc65I GGTACC 1 cut(s) 182
AccB1I GGYRCC 1 cut(s) 182
AccI GTMKAC 1 cut(s) 447
AciI CCGC 1 cut(s) 414
AclI AACGTT 1 cut(s) 362
AclWI GGATC 3 cut(s) 318, 331, 728
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 10, 345
AcyI GRCGYC 1 cut(s) 356
AfaI GTAC 3 cut(s) 184, 393, 522
AfiI CCNNNNNNNGG 2 cut(s) 177, 192
AgsI TTSAA 5 cut(s) 427, 440, 518, 575, 730
AjnI CCWGG 2 cut(s) 5, 274
AjuI GAANNNNNNNTTGG 2 cut(s) 548, 580
AleI CACNNNNGTG 1 cut(s) 57
AloI GAACNNNNNNTCC 2 cut(s) 308, 340
AluBI AGCT 1 cut(s) 748
AluI AGCT 1 cut(s) 748
Alw26I GTCTC 3 cut(s) 347, 427, 643
AlwI GGATC 3 cut(s) 318, 331, 728
AoxI GGCC 2 cut(s) 3, 271
ApeKI GCWGC 1 cut(s) 62
ApoI RAATTY 2 cut(s) 10, 345
Asp700I GAANNNNTTC 1 cut(s) 522
Asp718I GGTACC 1 cut(s) 182
AspS9I GGNCC 2 cut(s) 272, 278
AsuC2I CCSGG 1 cut(s) 179
AvaII GGWCC 1 cut(s) 278
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 323
BanI GGYRCC 1 cut(s) 182
BauI CACGAG 1 cut(s) 350
BbsI GAAGAC 1 cut(s) 484
BbvCI CCTCAGC 1 cut(s) 98
BbvI GCAGC 1 cut(s) 49
BccI CCATC 2 cut(s) 463, 497
BciT130I CCWGG 2 cut(s) 7, 276
BclI TGATCA 2 cut(s) 640, 655
BcnI CCSGG 1 cut(s) 179
BcoDI GTCTC 3 cut(s) 347, 427, 643
BfmI CTRYAG 2 cut(s) 63, 529
BfuAI ACCTGC 1 cut(s) 56
BglII AGATCT 1 cut(s) 714
BisI GCNGC 1 cut(s) 63
BlsI GCNGC 1 cut(s) 64
BmcAI AGTACT 1 cut(s) 522
Bme1390I CCNGG 3 cut(s) 7, 179, 276
Bme18I GGWCC 1 cut(s) 278
BmgT120I GGNCC 2 cut(s) 272, 278
BmiI GGNNCC 3 cut(s) 184, 280, 325
BmrFI CCNGG 3 cut(s) 7, 179, 276
BmsI GCATC 2 cut(s) 103, 111
BpiI GAAGAC 1 cut(s) 484
Bpu10I CCTNAGC 2 cut(s) 98, 774
BpuMI CCSGG 1 cut(s) 179
BsaBI GATNNNNATC 2 cut(s) 594, 713
BsaHI GRCGYC 1 cut(s) 356
BsaJI CCNNGG 2 cut(s) 178, 274
BsaXI ACNNNNNCTCC 2 cut(s) 498, 528
Bsc4I CCNNNNNNNGG 2 cut(s) 177, 192
Bse1I ACTGG 1 cut(s) 325
Bse3DI GCAATG 1 cut(s) 367
Bse8I GATNNNNATC 2 cut(s) 594, 713
BseBI CCWGG 2 cut(s) 7, 276
BseDI CCNNGG 2 cut(s) 178, 274
BseGI GGATG 3 cut(s) 295, 508, 631
BseJI GATNNNNATC 2 cut(s) 594, 713
BseLI CCNNNNNNNGG 2 cut(s) 177, 192
BseMI GCAATG 1 cut(s) 367
BseMII CTCAG 1 cut(s) 112
BseNI ACTGG 1 cut(s) 325
BseXI GCAGC 1 cut(s) 49
BshFI GGCC 2 cut(s) 5, 273
BshNI GGYRCC 1 cut(s) 182
BsiSI CCGG 1 cut(s) 178
BslI CCNNNNNNNGG 2 cut(s) 177, 192
BsmAI GTCTC 3 cut(s) 347, 427, 643
BsmBI CGTCTC 1 cut(s) 347
BsnI GGCC 2 cut(s) 5, 273
BspACI CCGC 1 cut(s) 414
BspANI GGCC 2 cut(s) 5, 273
BspCNI CTCAG 1 cut(s) 111
BspLI GGNNCC 3 cut(s) 184, 280, 325
BspMAI CTGCAG 1 cut(s) 67
BspMI ACCTGC 1 cut(s) 56
BspPI GGATC 3 cut(s) 318, 331, 728
BspT107I GGYRCC 1 cut(s) 182
BsrDI GCAATG 1 cut(s) 367
BsrI ACTGG 1 cut(s) 325
BssECI CCNNGG 2 cut(s) 178, 274
BssNI GRCGYC 1 cut(s) 356
BssSI CACGAG 1 cut(s) 350
Bst2BI CACGAG 1 cut(s) 350
Bst2UI CCWGG 2 cut(s) 7, 276
Bst4CI ACNGT 1 cut(s) 286
Bst6I CTCTTC 1 cut(s) 641
BstACI GRCGYC 1 cut(s) 356
BstDEI CTNAG 2 cut(s) 98, 774
BstF5I GGATG 3 cut(s) 295, 508, 631
BstMAI GTCTC 3 cut(s) 347, 427, 643
BstNI CCWGG 2 cut(s) 7, 276
BstSCI CCNGG 3 cut(s) 5, 177, 274
BstSFI CTRYAG 2 cut(s) 63, 529
BstV1I GCAGC 1 cut(s) 49
BstV2I GAAGAC 1 cut(s) 484
BstX2I RGATCY 3 cut(s) 323, 714, 733
BstXI CCANNNNNNTGG 1 cut(s) 38
BstYI RGATCY 3 cut(s) 323, 714, 733
BsuRI GGCC 2 cut(s) 5, 273
BtgZI GCGATG 1 cut(s) 290
BtsCI GGATG 3 cut(s) 295, 508, 631
BtsIMutI CAGTG 4 cut(s) 21, 197, 291, 318
BveI ACCTGC 1 cut(s) 56
Cfr13I GGNCC 2 cut(s) 272, 278
CseI GACGC 1 cut(s) 364
Csp6I GTAC 3 cut(s) 183, 392, 521
CviAII CATG 4 cut(s) 259, 395, 653, 696
CviJI RGCY 6 cut(s) 5, 96, 273, 743, 748, 773
CviKI_1 RGCY 6 cut(s) 5, 96, 273, 743, 748, 773
CviQI GTAC 3 cut(s) 183, 392, 521
DdeI CTNAG 2 cut(s) 98, 774
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 641
EarI CTCTTC 1 cut(s) 641
EciI GGCGGA 1 cut(s) 403
Eco47I GGWCC 1 cut(s) 278
EcoRI GAATTC 2 cut(s) 10, 345
EcoRII CCWGG 2 cut(s) 5, 274
Esp3I CGTCTC 1 cut(s) 347
FaeI CATG 4 cut(s) 262, 398, 656, 699
FaiI YATR 8 cut(s) 143, 237, 239, 260, 314, 396, 654, 697
FatI CATG 4 cut(s) 258, 394, 652, 695
FbaI TGATCA 2 cut(s) 640, 655
FblI GTMKAC 1 cut(s) 447
Fnu4HI GCNGC 1 cut(s) 63
FokI GGATG 3 cut(s) 302, 515, 638
Fsp4HI GCNGC 1 cut(s) 63
GluI GCNGC 1 cut(s) 63
HaeIII GGCC 2 cut(s) 5, 273
HapII CCGG 1 cut(s) 178
HgaI GACGC 1 cut(s) 364
Hin1I GRCGYC 1 cut(s) 356
Hin1II CATG 4 cut(s) 262, 398, 656, 699
HinfI GANTC 1 cut(s) 535
HpaII CCGG 1 cut(s) 178
Hpy166II GTNNAC 1 cut(s) 448
Hpy188I TCNGA 4 cut(s) 555, 603, 615, 645
Hpy188III TCNNGA 5 cut(s) 350, 539, 623, 632, 659
Hpy8I GTNNAC 1 cut(s) 448
HpyCH4III ACNGT 1 cut(s) 286
HpyCH4IV ACGT 2 cut(s) 139, 362
HpyCH4V TGCA 3 cut(s) 65, 116, 680
HpyF3I CTNAG 2 cut(s) 98, 774
HpySE526I ACGT 2 cut(s) 139, 362
Hsp92I GRCGYC 1 cut(s) 356
Hsp92II CATG 4 cut(s) 262, 398, 656, 699
KpnI GGTACC 1 cut(s) 186
Ksp22I TGATCA 2 cut(s) 640, 655
Lsp1109I GCAGC 1 cut(s) 49
LweI GCATC 2 cut(s) 103, 111
MaeII ACGT 2 cut(s) 139, 362
MboII GAAGA 7 cut(s) 148, 489, 503, 605, 658, 718, 724
MfeI CAATTG 1 cut(s) 32
MflI RGATCY 3 cut(s) 323, 714, 733
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 8 cut(s) 10, 32, 227, 345, 510, 549, 578, 725
MluNI TGGCCA 1 cut(s) 5
MnlI CCTC 4 cut(s) 107, 391, 500, 756
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 1 cut(s) 522
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 129, 249, 759
MslI CAYNNNNRTG 1 cut(s) 57
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 1 cut(s) 178
MspR9I CCNGG 3 cut(s) 7, 179, 276
MunI CAATTG 1 cut(s) 32
MvaI CCWGG 2 cut(s) 7, 276
NciI CCSGG 1 cut(s) 179
NlaIII CATG 4 cut(s) 262, 398, 656, 699
NlaIV GGNNCC 3 cut(s) 184, 280, 325
OliI CACNNNNGTG 1 cut(s) 57
PdmI GAANNNNTTC 1 cut(s) 522
PfeI GAWTC 1 cut(s) 535
PkrI GCNGC 1 cut(s) 64
Psp1406I AACGTT 1 cut(s) 362
Psp6I CCWGG 2 cut(s) 5, 274
PspGI CCWGG 2 cut(s) 5, 274
PspN4I GGNNCC 3 cut(s) 184, 280, 325
PspPI GGNCC 2 cut(s) 272, 278
PstI CTGCAG 1 cut(s) 67
PsuI RGATCY 3 cut(s) 323, 714, 733
RsaI GTAC 3 cut(s) 184, 393, 522
RsaNI GTAC 3 cut(s) 183, 392, 521
RseI CAYNNNNRTG 1 cut(s) 57
SaqAI TTAA 3 cut(s) 129, 249, 759
SatI GCNGC 1 cut(s) 63
Sau96I GGNCC 2 cut(s) 272, 278
ScaI AGTACT 1 cut(s) 522
ScrFI CCNGG 3 cut(s) 7, 179, 276
SetI ASST 9 cut(s) 70, 81, 142, 188, 255, 365, 402, 487, 750
SfaNI GCATC 2 cut(s) 103, 111
SfcI CTRYAG 2 cut(s) 63, 529
SinI GGWCC 1 cut(s) 278
SmiMI CAYNNNNRTG 1 cut(s) 57
Sse9I AATT 8 cut(s) 10, 32, 227, 345, 510, 549, 578, 725
SsiI CCGC 1 cut(s) 414
StyD4I CCNGG 3 cut(s) 5, 177, 274
TaaI ACNGT 1 cut(s) 286
TaiI ACGT 2 cut(s) 142, 365
TasI AATT 8 cut(s) 10, 32, 227, 345, 510, 549, 578, 725
TatI WGTACW 1 cut(s) 520
TfiI GAWTC 1 cut(s) 535
Tru1I TTAA 3 cut(s) 129, 249, 759
Tru9I TTAA 3 cut(s) 129, 249, 759
TscAI CASTG 4 cut(s) 21, 197, 291, 325
TseI GCWGC 1 cut(s) 62
TspDTI ATGAA 5 cut(s) 293, 329, 606, 684, 725
TspRI CASTG 4 cut(s) 21, 197, 291, 325
VpaK11BI GGWCC 1 cut(s) 278
XapI RAATTY 2 cut(s) 10, 345
XcmI CCANNNNNNNNNTGG 1 cut(s) 13
XmiI GTMKAC 1 cut(s) 447
XmnI GAANNNNTTC 1 cut(s) 522
ZrmI AGTACT 1 cut(s) 522
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.