Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006005

Physical Location & Seq

Genomic Coordinates Forward (+)

12938348 .. 12943281

Gene Structure 4934 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G098100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

ATGTCCGGCTGCGCTCGAGCTCCCAACCGCCAACCAACGCCGGCGACGGCGGCCACCGCCGGCGGCACCCAGATCCTGCCGCCGCTGAGGCGTCACCTCGCGTTTGAGTCGACGAAGCCGCAGCCCTTCCCTCCGGACAATTACCATCGATTTGCTGGAGGTGCTCGCAGAGCTGGTGACCACGAACCTGAAGCTATTCATGTTCGATCTCCTCAACTTACACGGAAGGATAATAATGAAGTTGAGTACAGTGATTGGACAAGCAGTCCTGGATATACTAATGTCGTTCAGAGTCCCCTTCAGACTCCCATGTCTACAAAAGGGGGAAGGATAAACAATAGGTCAAAGGCTTCAAAGGGCAATAGATCTGGGCCTCAGACACCTGTGTCAAATGCTGGCTCCCCTTCTCCTCTTACTCCAGCTGGCAGCTGTCGTTATGACAGTTCTCTAGGTCTGTTGACAAAGAAATTCATCAATTTGATTAAGCATGCAGAGGATGGAATTCTTGATCTAAACAAAGCAGCAGAAACTTTGGAGGTTCAGAAGAGGCGGATATATGACATTACAAACGTCTTGGAAGGCATAGGTCTAATTGAAAAGAAGCTCAAGAACAGAATACGTTGGAAGGGATTTGATGCTTCAAGGCCAGGGGAGTTGGATGGTGATCTCTCTATACTACAGGCTGAAGTTGAAAACCTATCCTTAAAAGAGCGCACATTAGATGACCAAATAAGAGAGATGCAGGAAAAATTGAGGGATTTGAGTGAAGATGAAAACAACCGAAAGTGGCTGTTTGTCACTGAAGAAGACATTAAAGCCATACCCTGCTTCCACAATGAAACCCTGATAGCAATTAAAGCTCCACATGGAACCACCTTGGAAGTCCCGGATCCTGATGAAGCAGTTGACTATCCACAGAGGAGATACAGGATCATACTTAGAAGCACAATGGGACCCATTGATGTCTACCTTGTCAGTCAATTTGAGGAGAAGTTTGAGGATATAAATGGCGCTGAGCCACCTGTGAGTTTCCCAATTGCTTCTGGTTCTGGGTCCAACGAACACCCAACAACAGAAGTGATCACTGTGGAGAGCAGTGGAAAGGAAATTGAACCTTGGGCGCAACAGGCTGATCAAACGTGCTCTGATATTAACACTTCTCAGGAGTTTGCTGGGGGAATGATGAAGATTGTCCCCTCTGATGTTGATAATGATGCAGACTACTGGCTTTTGTCTGATGCTGAAGTTAGCATTACAGATATGTGGAGAACGGATTCTGGTGTTGGATGGAATGGGGCAGACATTCTACACTCCGACTTTGGAGTTCCTGATGTTAGTATAACAAGGCCACAAACTCCCCCATCTGGGATTGCTGAAATTCCACCTCATGCTGTTAACTTCTCTCAAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0045787 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051445 GO:0051446 GO:0051726 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko01522 ko03018 ko04110 ko04218 ko04934 ko05161 ko05166 ko05167 ko05200 ko05206 ko05212 ko05214 ko05215 ko05218 ko05219 ko05220 ko05222 ko05223 ko05224 ko05225 ko05226 map01522 map03018 map04110 map04218 map04934 map05161 map05166 map05167 map05200 map05206 map05212 map05214 map05215 map05218 map05219 map05220 map05222 map05223 map05224 map05225 map05226

Pfam Domains

Protein Families

E2F_CC-MB E2F_TDP

Protein Analysis

471

Amino Acids

51.89

Weight (kDa)

5.15

Isoelectric Point (pI)

53.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36010 AT2G36010 AT2G36010
fragaria_vesca	FvH4_6g19970 FvH4_6g19970 FvH4_6g19970 FvH4_6g19970 FvH4_6g19970 FvH4_6g19970 FvH4_6g19970
malus_domestica	MD12G1037100.v1.1 MD14G1036100.v1.1
prunus_persica	Prupe.7G098100_v2.0.a1
pyrus_communis	pycom12g03210 pycom14g03180
rosa_chinensis	RchiOBHm_Chr3g0475421
rosa_laevigata	RLG00000023845
rosa_multiflora	Rmu_sc0016637.1_g000006 Rmu_sc0018174.1_g000003
rosa_roxburghii	Rroxscaffold_6G00406320
rosa_rugosa	Rorug03G0148700 Rorug03G0148700
rosa_samantha	Rh3AG198900 Rh3BG228700 Rh3CG223100 Rh3DG224100
rosa_wichuraiana	Rw3G018050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	310, 385
AccB1I	GGYRCC	1 cut(s)	65
AccI	GTMKAC	3 cut(s)	110, 314, 966
AccII	CGCG	1 cut(s)	101
AccIII	TCCGGA	1 cut(s)	133
AciI	CCGC	8 cut(s)	28, 50, 57, 63, 80, 83, 119, 550
AclWI	GGATC	4 cut(s)	67, 884, 897, 938
AcoI	YGGCCR	1 cut(s)	51
AcsI	RAATTY	3 cut(s)	467, 501, 1377
AcuI	CTGAAG	5 cut(s)	210, 284, 705, 822, 1263
AcyI	GRCGYC	1 cut(s)	91
AfaI	GTAC	1 cut(s)	248
AfiI	CCNNNNNNNGG	2 cut(s)	1364, 1365
AgsI	TTSAA	5 cut(s)	354, 596, 642, 692, 1112
AhdI	GACNNNNNGTC	1 cut(s)	264
AjnI	CCWGG	2 cut(s)	268, 646
AluBI	AGCT	7 cut(s)	20, 173, 194, 422, 429, 604, 860
AluI	AGCT	7 cut(s)	20, 173, 194, 422, 429, 604, 860
Alw21I	GWGCWC	3 cut(s)	22, 166, 1145
AlwI	GGATC	4 cut(s)	67, 884, 897, 938
AlwNI	CAGNNNCTG	1 cut(s)	76
Ama87I	CYCGRG	1 cut(s)	15
Aor13HI	TCCGGA	1 cut(s)	133
AoxI	GGCC	4 cut(s)	51, 371, 644, 1346
ApeKI	GCWGC	4 cut(s)	9, 121, 426, 521
ApoI	RAATTY	3 cut(s)	467, 501, 1377
Asp700I	GAANNNNTTC	2 cut(s)	195, 1273
AspLEI	GCGC	4 cut(s)	14, 714, 1013, 1123
AspS9I	GGNCC	3 cut(s)	371, 953, 1053
AsuC2I	CCSGG	1 cut(s)	887
AsuHPI	GGTGA	3 cut(s)	86, 188, 674
AvaI	CYCGRG	1 cut(s)	15
AvaII	GGWCC	2 cut(s)	953, 1053
BamHI	GGATCC	1 cut(s)	889
BanI	GGYRCC	1 cut(s)	65
BanII	GRGCYC	1 cut(s)	22
BbsI	GAAGAC	1 cut(s)	813
Bbv12I	GWGCWC	3 cut(s)	22, 166, 1145
BbvCI	CCTCAGC	1 cut(s)	86
BbvI	GCAGC	3 cut(s)	133, 438, 533
BccI	CCATC	5 cut(s)	153, 491, 653, 1281, 1369
BceAI	ACGGC	1 cut(s)	63
BciT130I	CCWGG	2 cut(s)	270, 648
BclI	TGATCA	2 cut(s)	1080, 1132
BcnI	CCSGG	1 cut(s)	887
BfaI	CTAG	1 cut(s)	449
BfmI	CTRYAG	1 cut(s)	677
BfoI	RGCGCY	1 cut(s)	1014
BglI	GCCNNNNNGGC	1 cut(s)	88
BglII	AGATCT	1 cut(s)	365
BisI	GCNGC	9 cut(s)	10, 51, 64, 80, 83, 119, 122, 427, 522
BlpI	GCTNAGC	1 cut(s)	1014
BlsI	GCNGC	9 cut(s)	11, 52, 65, 81, 84, 120, 123, 428, 523
Bme1390I	CCNGG	3 cut(s)	270, 648, 887
Bme18I	GGWCC	2 cut(s)	953, 1053
BmeRI	GACNNNNNGTC	1 cut(s)	264
BmeT110I	CYCGRG	1 cut(s)	15
BmgT120I	GGNCC	3 cut(s)	371, 953, 1053
BmiI	GGNNCC	7 cut(s)	67, 400, 871, 891, 954, 955, 1054
BmrFI	CCNGG	3 cut(s)	270, 648, 887
BmsI	GCATC	4 cut(s)	625, 729, 1204, 1228
BpiI	GAAGAC	1 cut(s)	813
BpmI	CTGGAG	2 cut(s)	177, 402
Bpu10I	CCTNAGC	1 cut(s)	86
Bpu1102I	GCTNAGC	1 cut(s)	1014
BpuEI	CTTGAG	1 cut(s)	590
BpuMI	CCSGG	1 cut(s)	887
Bsa29I	ATCGAT	1 cut(s)	148
BsaBI	GATNNNNATC	1 cut(s)	663
BsaHI	GRCGYC	1 cut(s)	91
BsaJI	CCNNGG	3 cut(s)	647, 876, 1115
BsaWI	WCCGGW	1 cut(s)	133
Bsc4I	CCNNNNNNNGG	2 cut(s)	1364, 1365
Bse118I	RCCGGY	2 cut(s)	40, 59
Bse1I	ACTGG	1 cut(s)	1229
Bse8I	GATNNNNATC	1 cut(s)	663
BseAI	TCCGGA	1 cut(s)	133
BseBI	CCWGG	2 cut(s)	270, 648
BseCI	ATCGAT	1 cut(s)	148
BseDI	CCNNGG	3 cut(s)	647, 876, 1115
BseGI	GGATG	3 cut(s)	502, 664, 1292
BseJI	GATNNNNATC	1 cut(s)	663
BseLI	CCNNNNNNNGG	2 cut(s)	1364, 1365
BseMII	CTCAG	4 cut(s)	77, 389, 1005, 1175
BseNI	ACTGG	1 cut(s)	1229
BseRI	GAGGAG	4 cut(s)	201, 399, 934, 1001
BseXI	GCAGC	3 cut(s)	133, 438, 533
BseYI	CCCAGC	1 cut(s)	1172
Bsh1236I	CGCG	1 cut(s)	101
BshFI	GGCC	4 cut(s)	53, 373, 646, 1348
BshNI	GGYRCC	1 cut(s)	65
BshVI	ATCGAT	1 cut(s)	148
BsiHKAI	GWGCWC	3 cut(s)	22, 166, 1145
BsiHKCI	CYCGRG	1 cut(s)	15
BsiSI	CCGG	5 cut(s)	6, 41, 60, 134, 887
BslFI	GGGAC	4 cut(s)	279, 869, 966, 1178
BslI	CCNNNNNNNGG	2 cut(s)	1364, 1365
BsmFI	GGGAC	4 cut(s)	279, 869, 966, 1178
BsnI	GGCC	4 cut(s)	53, 373, 646, 1348
BsoBI	CYCGRG	1 cut(s)	15
Bsp1286I	GDGCHC	3 cut(s)	22, 166, 1145
Bsp13I	TCCGGA	1 cut(s)	133
Bsp143I	GATC	9 cut(s)	72, 206, 365, 508, 664, 889, 930, 1080, 1132
Bsp1720I	GCTNAGC	1 cut(s)	1014
BspACI	CCGC	8 cut(s)	28, 50, 57, 63, 80, 83, 119, 550
BspANI	GGCC	4 cut(s)	53, 373, 646, 1348
BspCNI	CTCAG	4 cut(s)	78, 388, 1006, 1174
BspDI	ATCGAT	1 cut(s)	148
BspEI	TCCGGA	1 cut(s)	133
BspFNI	CGCG	1 cut(s)	101
BspLI	GGNNCC	7 cut(s)	67, 400, 871, 891, 954, 955, 1054
BspPI	GGATC	4 cut(s)	67, 884, 897, 938
BspT107I	GGYRCC	1 cut(s)	65
BsrFI	RCCGGY	2 cut(s)	40, 59
BsrI	ACTGG	1 cut(s)	1229
BssAI	RCCGGY	2 cut(s)	40, 59
BssECI	CCNNGG	3 cut(s)	647, 876, 1115
BssMI	GATC	9 cut(s)	72, 206, 365, 508, 664, 889, 930, 1080, 1132
BssNI	GRCGYC	1 cut(s)	91
BssT1I	CCWWGG	2 cut(s)	876, 1115
Bst2UI	CCWGG	2 cut(s)	270, 648
Bst4CI	ACNGT	3 cut(s)	251, 443, 1087
Bst6I	CTCTTC	1 cut(s)	539
BstACI	GRCGYC	1 cut(s)	91
BstC8I	GCNNGC	6 cut(s)	42, 61, 166, 397, 424, 489
BstDEI	CTNAG	5 cut(s)	86, 375, 938, 1014, 1161
BstEII	GGTNACC	1 cut(s)	176
BstF5I	GGATG	3 cut(s)	502, 664, 1292
BstFNI	CGCG	1 cut(s)	101
BstH2I	RGCGCY	1 cut(s)	1014
BstHHI	GCGC	4 cut(s)	14, 714, 1013, 1123
BstKTI	GATC	9 cut(s)	75, 209, 368, 511, 667, 892, 933, 1083, 1135
BstMBI	GATC	9 cut(s)	72, 206, 365, 508, 664, 889, 930, 1080, 1132
BstMWI	GCNNNNNNNGC	7 cut(s)	50, 56, 88, 161, 170, 857, 1127
BstNI	CCWGG	2 cut(s)	270, 648
BstNSI	RCATGY	1 cut(s)	491
BstPI	GGTNACC	1 cut(s)	176
BstSCI	CCNGG	3 cut(s)	268, 646, 885
BstSFI	CTRYAG	1 cut(s)	677
BstUI	CGCG	1 cut(s)	101
BstV1I	GCAGC	3 cut(s)	133, 438, 533
BstV2I	GAAGAC	1 cut(s)	813
BstX2I	RGATCY	3 cut(s)	72, 365, 889
BstYI	RGATCY	3 cut(s)	72, 365, 889
Bsu15I	ATCGAT	1 cut(s)	148
BsuRI	GGCC	4 cut(s)	53, 373, 646, 1348
BsuTUI	ATCGAT	1 cut(s)	148
BtsCI	GGATG	3 cut(s)	502, 664, 1292
BtsI	GCAGTG	1 cut(s)	1102
BtsIMutI	CAGTG	4 cut(s)	256, 798, 1083, 1102
Cac8I	GCNNGC	6 cut(s)	42, 61, 166, 397, 424, 489
CaiI	CAGNNNCTG	1 cut(s)	76
CfoI	GCGC	4 cut(s)	14, 714, 1013, 1123
Cfr10I	RCCGGY	2 cut(s)	40, 59
Cfr13I	GGNCC	3 cut(s)	371, 953, 1053
ClaI	ATCGAT	1 cut(s)	148
CseI	GACGC	1 cut(s)	80
Csp6I	GTAC	1 cut(s)	247
CviAII	CATG	5 cut(s)	200, 310, 488, 866, 1388
CviQI	GTAC	1 cut(s)	247
DdeI	CTNAG	5 cut(s)	86, 375, 938, 1014, 1161
DpnI	GATC	9 cut(s)	74, 208, 367, 510, 666, 891, 932, 1082, 1134
DpnII	GATC	9 cut(s)	72, 206, 365, 508, 664, 889, 930, 1080, 1132
DrdI	GACNNNNNNGTC	2 cut(s)	310, 385
DriI	GACNNNNNGTC	1 cut(s)	264
DseDI	GACNNNNNNGTC	2 cut(s)	310, 385
EaeI	YGGCCR	1 cut(s)	51
Eam1104I	CTCTTC	1 cut(s)	539
Eam1105I	GACNNNNNGTC	1 cut(s)	264
EarI	CTCTTC	1 cut(s)	539
EciI	GGCGGA	1 cut(s)	565
Ecl136II	GAGCTC	1 cut(s)	20
Eco130I	CCWWGG	2 cut(s)	876, 1115
Eco24I	GRGCYC	1 cut(s)	22
Eco47I	GGWCC	2 cut(s)	953, 1053
Eco53kI	GAGCTC	1 cut(s)	20
Eco57I	CTGAAG	5 cut(s)	210, 284, 705, 822, 1263
Eco88I	CYCGRG	1 cut(s)	15
Eco91I	GGTNACC	1 cut(s)	176
EcoICRI	GAGCTC	1 cut(s)	20
EcoO109I	RGGNCCY	1 cut(s)	953
EcoO65I	GGTNACC	1 cut(s)	176
EcoRI	GAATTC	1 cut(s)	501
EcoRII	CCWGG	2 cut(s)	268, 646
EcoT14I	CCWWGG	2 cut(s)	876, 1115
EcoT38I	GRGCYC	1 cut(s)	22
ErhI	CCWWGG	2 cut(s)	876, 1115
FaeI	CATG	5 cut(s)	203, 313, 491, 869, 1391
FaqI	GGGAC	4 cut(s)	279, 869, 966, 1178
FatI	CATG	5 cut(s)	199, 309, 487, 865, 1387
FbaI	TGATCA	2 cut(s)	1080, 1132
FblI	GTMKAC	3 cut(s)	110, 314, 966
Fnu4HI	GCNGC	9 cut(s)	10, 51, 64, 80, 83, 119, 122, 427, 522
FokI	GGATG	3 cut(s)	509, 671, 1299
FriOI	GRGCYC	1 cut(s)	22
Fsp4HI	GCNGC	9 cut(s)	10, 51, 64, 80, 83, 119, 122, 427, 522
FspBI	CTAG	1 cut(s)	449
GlaI	GCGC	4 cut(s)	13, 713, 1012, 1122
GluI	GCNGC	9 cut(s)	10, 51, 64, 80, 83, 119, 122, 427, 522
GsaI	CCCAGC	1 cut(s)	1176
GsuI	CTGGAG	2 cut(s)	177, 402
HaeII	RGCGCY	1 cut(s)	1014
HaeIII	GGCC	4 cut(s)	53, 373, 646, 1348
HapII	CCGG	5 cut(s)	6, 41, 60, 134, 887
HgaI	GACGC	1 cut(s)	80
HhaI	GCGC	4 cut(s)	14, 714, 1013, 1123
Hin1I	GRCGYC	1 cut(s)	91
Hin1II	CATG	5 cut(s)	203, 313, 491, 869, 1391
Hin6I	GCGC	4 cut(s)	12, 712, 1011, 1121
HinP1I	GCGC	4 cut(s)	12, 712, 1011, 1121
HincII	GTYRAC	4 cut(s)	111, 459, 907, 1396
HindII	GTYRAC	4 cut(s)	111, 459, 907, 1396
HinfI	GANTC	4 cut(s)	107, 292, 304, 1274
HpaI	GTTAAC	1 cut(s)	1396
HpaII	CCGG	5 cut(s)	6, 41, 60, 134, 887
HphI	GGTGA	3 cut(s)	86, 188, 674
Hpy166II	GTNNAC	6 cut(s)	111, 315, 459, 907, 967, 1396
Hpy188I	TCNGA	8 cut(s)	291, 303, 378, 543, 1147, 1201, 1237, 1315
Hpy188III	TCNNGA	6 cut(s)	134, 506, 607, 893, 1163, 1328
Hpy8I	GTNNAC	6 cut(s)	111, 315, 459, 907, 967, 1396
Hpy99I	CGWCG	2 cut(s)	49, 115
HpyAV	CCTTC	7 cut(s)	136, 220, 308, 321, 414, 572, 619
HpyCH4III	ACNGT	3 cut(s)	251, 443, 1087
HpyCH4IV	ACGT	3 cut(s)	570, 619, 1139
HpyCH4V	TGCA	3 cut(s)	491, 742, 1217
HpyF10VI	GCNNNNNNNGC	7 cut(s)	50, 56, 88, 161, 170, 857, 1127
HpyF3I	CTNAG	5 cut(s)	86, 375, 938, 1014, 1161
HpySE526I	ACGT	3 cut(s)	570, 619, 1139
Hsp92I	GRCGYC	1 cut(s)	91
Hsp92II	CATG	5 cut(s)	203, 313, 491, 869, 1391
HspAI	GCGC	4 cut(s)	12, 712, 1011, 1121
KflI	GGGWCCC	1 cut(s)	953
Kpn2I	TCCGGA	1 cut(s)	133
KroI	GCCGGC	2 cut(s)	40, 59
KroNI	GCCGGC	2 cut(s)	42, 61
Ksp22I	TGATCA	2 cut(s)	1080, 1132
KspAI	GTTAAC	1 cut(s)	1396
Kzo9I	GATC	9 cut(s)	72, 206, 365, 508, 664, 889, 930, 1080, 1132
LmnI	GCTCC	3 cut(s)	25, 404, 865
Lsp1109I	GCAGC	3 cut(s)	133, 438, 533
LweI	GCATC	4 cut(s)	625, 729, 1204, 1228
MaeI	CTAG	1 cut(s)	449
MaeII	ACGT	3 cut(s)	570, 619, 1139
MaeIII	GTNAC	3 cut(s)	92, 176, 796
MalI	GATC	9 cut(s)	74, 208, 367, 510, 666, 891, 932, 1082, 1134
MboI	GATC	9 cut(s)	72, 206, 365, 508, 664, 889, 930, 1080, 1132
MboII	GAAGA	5 cut(s)	556, 779, 815, 818, 1198
MfeI	CAATTG	1 cut(s)	1035
MflI	RGATCY	3 cut(s)	72, 365, 889
MhlI	GDGCHC	3 cut(s)	22, 166, 1145
MlyI	GAGTC	3 cut(s)	116, 298, 301
MmeI	TCCRAC	5 cut(s)	602, 636, 1080, 1264, 1338
MreI	CGCCGGCG	2 cut(s)	40, 59
MroI	TCCGGA	1 cut(s)	133
MroNI	GCCGGC	2 cut(s)	40, 59
MroXI	GAANNNNTTC	2 cut(s)	195, 1273
MseI	TTAA	6 cut(s)	483, 704, 813, 855, 1152, 1395
MspA1I	CMGCKG	3 cut(s)	85, 422, 429
MspI	CCGG	5 cut(s)	6, 41, 60, 134, 887
MspR9I	CCNGG	3 cut(s)	270, 648, 887
MunI	CAATTG	1 cut(s)	1035
MvaI	CCWGG	2 cut(s)	270, 648
MvnI	CGCG	1 cut(s)	101
MwoI	GCNNNNNNNGC	7 cut(s)	50, 56, 88, 161, 170, 857, 1127
NaeI	GCCGGC	2 cut(s)	42, 61
NciI	CCSGG	1 cut(s)	887
NdeII	GATC	9 cut(s)	72, 206, 365, 508, 664, 889, 930, 1080, 1132
NgoMIV	GCCGGC	2 cut(s)	40, 59
NlaIII	CATG	5 cut(s)	203, 313, 491, 869, 1391
NlaIV	GGNNCC	7 cut(s)	67, 400, 871, 891, 954, 955, 1054
NmuCI	GTSAC	3 cut(s)	92, 176, 796
NspI	RCATGY	1 cut(s)	491
PaeI	GCATGC	1 cut(s)	491
PaeR7I	CTCGAG	1 cut(s)	15
PdiI	GCCGGC	2 cut(s)	42, 61
PdmI	GAANNNNTTC	2 cut(s)	195, 1273
PfeI	GAWTC	1 cut(s)	1274
PfoI	TCCNGGA	2 cut(s)	268, 885
PkrI	GCNGC	9 cut(s)	11, 52, 65, 81, 84, 120, 123, 428, 523
PleI	GAGTC	3 cut(s)	115, 298, 300
PpsI	GAGTC	3 cut(s)	115, 298, 300
PpuMI	RGGWCCY	1 cut(s)	953
Psp124BI	GAGCTC	1 cut(s)	22
Psp5II	RGGWCCY	1 cut(s)	953
Psp6I	CCWGG	2 cut(s)	268, 646
PspEI	GGTNACC	1 cut(s)	176
PspFI	CCCAGC	1 cut(s)	1172
PspGI	CCWGG	2 cut(s)	268, 646
PspN4I	GGNNCC	7 cut(s)	67, 400, 871, 891, 954, 955, 1054
PspPI	GGNCC	3 cut(s)	371, 953, 1053
PspPPI	RGGWCCY	1 cut(s)	953
PspXI	VCTCGAGB	1 cut(s)	15
PstNI	CAGNNNCTG	1 cut(s)	76
PsuI	RGATCY	3 cut(s)	72, 365, 889
PvuII	CAGCTG	2 cut(s)	422, 429
RsaI	GTAC	1 cut(s)	248
RsaNI	GTAC	1 cut(s)	247
SacI	GAGCTC	1 cut(s)	22
SalI	GTCGAC	1 cut(s)	109
SaqAI	TTAA	6 cut(s)	483, 704, 813, 855, 1152, 1395
SatI	GCNGC	9 cut(s)	10, 51, 64, 80, 83, 119, 122, 427, 522
Sau3AI	GATC	9 cut(s)	72, 206, 365, 508, 664, 889, 930, 1080, 1132
Sau96I	GGNCC	3 cut(s)	371, 953, 1053
SchI	GAGTC	3 cut(s)	116, 298, 301
ScrFI	CCNGG	3 cut(s)	270, 648, 887
SduI	GDGCHC	3 cut(s)	22, 166, 1145
SfaNI	GCATC	4 cut(s)	625, 729, 1204, 1228
SfcI	CTRYAG	1 cut(s)	677
Sfr274I	CTCGAG	1 cut(s)	15
SgrAI	CRCCGGYG	2 cut(s)	40, 59
SinI	GGWCC	2 cut(s)	953, 1053
SlaI	CTCGAG	1 cut(s)	15
SmlI	CTYRAG	2 cut(s)	15, 605
SmoI	CTYRAG	2 cut(s)	15, 605
SphI	GCATGC	1 cut(s)	491
SsiI	CCGC	8 cut(s)	28, 50, 57, 63, 80, 83, 119, 550
SspMI	CTAG	1 cut(s)	449
SstI	GAGCTC	1 cut(s)	22
StyD4I	CCNGG	3 cut(s)	268, 646, 885
StyI	CCWWGG	2 cut(s)	876, 1115
TaaI	ACNGT	3 cut(s)	251, 443, 1087
TaiI	ACGT	3 cut(s)	573, 622, 1142
TaqI	TCGA	4 cut(s)	16, 110, 148, 205
TatI	WGTACW	1 cut(s)	246
TauI	GCSGC	5 cut(s)	53, 66, 82, 85, 121
TfiI	GAWTC	1 cut(s)	1274
Tru1I	TTAA	6 cut(s)	483, 704, 813, 855, 1152, 1395
Tru9I	TTAA	6 cut(s)	483, 704, 813, 855, 1152, 1395
TscAI	CASTG	4 cut(s)	256, 805, 1090, 1102
TseFI	GTSAC	3 cut(s)	92, 176, 796
TseI	GCWGC	4 cut(s)	9, 121, 426, 521
Tsp45I	GTSAC	3 cut(s)	92, 176, 796
TspDTI	ATGAA	7 cut(s)	188, 252, 460, 786, 852, 912, 1199
TspGWI	ACGGA	2 cut(s)	238, 1286
TspRI	CASTG	4 cut(s)	256, 805, 1090, 1102
VpaK11BI	GGWCC	2 cut(s)	953, 1053
XapI	RAATTY	3 cut(s)	467, 501, 1377
XceI	RCATGY	1 cut(s)	491
XcmI	CCANNNNNNNNNTGG	1 cut(s)	152
XhoI	CTCGAG	1 cut(s)	15
XmiI	GTMKAC	3 cut(s)	110, 314, 966
XmnI	GAANNNNTTC	2 cut(s)	195, 1273
XspI	CTAG	1 cut(s)	449

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.