Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0018174.1

Orthogroup ID

OG0006005

Physical Location & Seq

Genomic Coordinates Reverse (-)

12866 .. 19946

Gene Structure 7081 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0018174.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

atggtggtgtggatcgcgacgaggtgtgttggcggcagggatctgaccaaactcggccagaatttgacgcatgatgagggatgggaacagatggaggactgggcccaaaccgggttgatgggctgtggacacttggaccgaagcctagaagggtccaccaacaacctgggcaaaagtgtgaagtggctgacctttaacggcgggttaaatgtggggaatgagaaggaggtcgccaaaagtcacatgaacgcagcaacagtagcaccaccaatacgaacaccaacttttggctacgtggtgcttagggttggttggatgagacatctgcacctccctccctcccgctcgctcgctcgctcgtcgtcgtcgcaatcggtgacggttcgagccggtgagatcctctccatgtccggctgcgctcgagctcccaaccgacaaccagggcctccgccgccgccggccaccggaggcggcagccagatcgtgccgccgatgaggcgccacctagtgttcgagtcgaacaagccgccgttttttcctccggctgattatcatcaattttcagggggagctcagaggccggcggaccaggagccggaagctattgttgttcgatctccgcaatttataaggaagggtgcagtggacaacaatgaagcggagaacaacgattggactaacagtccaggatataataatatgattcaaagtccccttcaaactcctgtgtctactacaaaagcaggaaagacaaacaatagaacaaaggtttcaaagggcaaatctgggcctcagacacctgcgtcaaatgctggttctccttgtcctcttactccagctggcagctgtcgttttgacagttctctaggtctattgacaaaaaaattcatcaatttgattaagcaagcagaagatggaatccttgatctaaacaaagcagcagaaactttagaggtgcagaagaggcggatatatgacatcacaaatgtcttggaaggcataggtctcatagaaaagaagctcaagaacagaatacgttggaagggatttgatgcttcaaggccaggagatctggatgctgatctctctatattacaggtattgaaatttctgtacattgctataaaaaccgtggtggtaaaaggaaattctgacaacttagctcgctcgtcgtcgtcgcaatcggtgacggttcgagccggtgagatcctctccatgtccggctgcgctcgagctcccaaccggcaaccagggccgccgccgccgccggccaccggaggcggcagccagatcgtgccgccgatgaggcgccacctagtgttcgagtcgaataagccgccgttttttcctccggctgattatcatcaattttccgggggagctcagaggccggcggaccaggagccggaagctattgttgttcgatctccgggagaagtggaaaccctatctttaaaagagcgcagcttagatgaccgaataagagagatggaagaaaagttgagggatttaagtggagatgaaaacaaccgaaagtggctttttgtgactgaagaagacattaagggcctaccgtgcttccagaatgaaaccttgatagcaattaaagctccacatggaaccaccttggaagtcccagatcccgatgaagctgtcgactatccacaacggagatacaggataatacttagaagcacaatgggacccattgacgtgtaccttgtcagtcaatttgaggagaagtttgatgacatcaatggagttgagccacctgttagcttcccaattgcttctggttctggctctaatgagcaatcaacaacagaaatggtcaatggacaaaacagaggaaaggaaattgatcctagggcgcaacaagctcaagttgatcagacgtgctctgatgtaaatgcttctcaggagtttggtgggggaatgatgaggattgttccttctgatgttgataatgatgcagactactggcttttgtctggtgttgatgttagcattacggatatgtggagaacagactcagctattgaatggaatggggaagacatgcttaatgctgattttggactgcccgatgtaagtaccccaaggccacaaacaccaccatctggaattgttgaagttccatctcatgctgttaacttttcccaaaggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0045787 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051445 GO:0051446 GO:0051726 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko01522 ko03018 ko04110 ko04218 ko04934 ko05161 ko05166 ko05167 ko05200 ko05206 ko05212 ko05214 ko05215 ko05218 ko05219 ko05220 ko05222 ko05223 ko05224 ko05225 ko05226 map01522 map03018 map04110 map04218 map04934 map05161 map05166 map05167 map05200 map05206 map05212 map05214 map05215 map05218 map05219 map05220 map05222 map05223 map05224 map05225 map05226

Pfam Domains

Protein Families

E2F_CC-MB E2F_TDP

Protein Analysis

722

Amino Acids

78.91

Weight (kDa)

5.9

Isoelectric Point (pI)

52.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36010 AT2G36010 AT2G36010
fragaria_vesca	FvH4_6g19970 FvH4_6g19970 FvH4_6g19970 FvH4_6g19970 FvH4_6g19970 FvH4_6g19970 FvH4_6g19970
malus_domestica	MD12G1037100.v1.1 MD14G1036100.v1.1
prunus_persica	Prupe.7G098100_v2.0.a1
pyrus_communis	pycom12g03210 pycom14g03180
rosa_chinensis	RchiOBHm_Chr3g0475421
rosa_laevigata	RLG00000023845
rosa_multiflora	Rmu_sc0016637.1_g000006 Rmu_sc0018174.1_g000003
rosa_roxburghii	Rroxscaffold_6G00406320
rosa_rugosa	Rorug03G0148700 Rorug03G0148700
rosa_samantha	Rh3AG198900 Rh3BG228700 Rh3CG223100 Rh3DG224100
rosa_wichuraiana	Rw3G018050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	629
AarI	CACCTGC	1 cut(s)	808
AasI	GACNNNNNNGTC	1 cut(s)	802
Acc36I	ACCTGC	1 cut(s)	808
AccB1I	GGYRCC	2 cut(s)	498, 1308
AccB7I	CCANNNNNTGG	2 cut(s)	287, 2120
AccBSI	CCGCTC	1 cut(s)	345
AccI	GTMKAC	2 cut(s)	731, 1656
AccII	CGCG	1 cut(s)	17
AclWI	GGATC	6 cut(s)	20, 48, 391, 1201, 1634, 1856
AcoI	YGGCCR	3 cut(s)	55, 459, 1269
AcsI	RAATTY	4 cut(s)	61, 884, 1106, 1147
AcuI	CTGAAG	1 cut(s)	1572
AcyI	GRCGYC	2 cut(s)	499, 1309
AdeI	CACNNNGTG	2 cut(s)	508, 1318
AfaI	GTAC	3 cut(s)	1115, 1718, 2095
AfiI	CCNNNNNNNGG	7 cut(s)	111, 287, 464, 595, 1274, 1405, 2120
AflIII	ACRYGT	1 cut(s)	1713
AgsI	TTSAA	7 cut(s)	707, 719, 774, 1059, 1105, 2042, 2132
AhdI	GACNNNNNGTC	1 cut(s)	681
AjiI	CACGTC	2 cut(s)	1714, 1896
AjnI	CCWGG	7 cut(s)	165, 439, 588, 685, 1063, 1249, 1398
Alw21I	GWGCWC	5 cut(s)	427, 574, 1237, 1384, 1901
Alw26I	GTCTC	2 cut(s)	313, 1010
AlwI	GGATC	6 cut(s)	20, 48, 391, 1201, 1634, 1856
Ama87I	CYCGRG	2 cut(s)	420, 1230
ApaI	GGGCCC	1 cut(s)	106
ApeKI	GCWGC	8 cut(s)	251, 414, 474, 843, 938, 1224, 1284, 1464
ApoI	RAATTY	4 cut(s)	61, 884, 1106, 1147
AspA2I	CCTAGG	1 cut(s)	1865
AspLEI	GCGC	6 cut(s)	419, 501, 1229, 1311, 1464, 1873
AsuC2I	CCSGG	3 cut(s)	112, 1375, 1431
AsuHPI	GGTGA	4 cut(s)	388, 404, 1198, 1214
AvaI	CYCGRG	2 cut(s)	420, 1230
AvaII	GGWCC	5 cut(s)	136, 153, 586, 1396, 1703
AvrII	CCTAGG	1 cut(s)	1865
BaeGI	GKGCMC	1 cut(s)	106
BanI	GGYRCC	2 cut(s)	498, 1308
BanII	GRGCYC	5 cut(s)	106, 427, 574, 1237, 1384
BbsI	GAAGAC	2 cut(s)	1563, 2061
Bbv12I	GWGCWC	5 cut(s)	427, 574, 1237, 1384, 1901
BbvI	GCAGC	8 cut(s)	263, 401, 486, 855, 950, 1211, 1296, 1476
BccI	CCATC	7 cut(s)	75, 85, 112, 908, 1483, 2125, 2146
BceAI	ACGGC	3 cut(s)	214, 514, 1324
BcgI	CGANNNNNNTGC	4 cut(s)	463, 497, 1273, 1307
BciT130I	CCWGG	7 cut(s)	167, 441, 590, 687, 1065, 1251, 1400
BclI	TGATCA	1 cut(s)	1888
BcnI	CCSGG	3 cut(s)	112, 1375, 1431
BcoDI	GTCTC	2 cut(s)	313, 1010
BfaI	CTAG	5 cut(s)	146, 506, 866, 1316, 1866
BfoI	RGCGCY	2 cut(s)	502, 1312
BfuAI	ACCTGC	1 cut(s)	808
BglI	GCCNNNNNGGC	2 cut(s)	496, 1306
BglII	AGATCT	1 cut(s)	1069
BlnI	CCTAGG	1 cut(s)	1865
Bme18I	GGWCC	5 cut(s)	136, 153, 586, 1396, 1703
BmeRI	GACNNNNNGTC	1 cut(s)	681
BmeT110I	CYCGRG	2 cut(s)	420, 1230
BmgBI	CACGTC	2 cut(s)	1714, 1896
BmiI	GGNNCC	9 cut(s)	104, 154, 500, 594, 1310, 1404, 1621, 1704, 1705
BmrI	ACTGGG	1 cut(s)	109
BmsI	GCATC	3 cut(s)	1042, 1066, 1960
BmuI	ACTGGG	1 cut(s)	109
BpiI	GAAGAC	2 cut(s)	1563, 2061
BplI	GAGNNNNNCTC	4 cut(s)	386, 418, 1196, 1228
BpmI	CTGGAG	1 cut(s)	819
Bpu10I	CCTNAGC	1 cut(s)	302
BpuEI	CTTGAG	2 cut(s)	1007, 1866
BpuMI	CCSGG	3 cut(s)	112, 1375, 1431
BsaAI	YACGTR	1 cut(s)	295
BsaBI	GATNNNNATC	3 cut(s)	552, 1080, 1362
BsaHI	GRCGYC	2 cut(s)	499, 1309
BsaI	GGTCTC	1 cut(s)	1010
BsaJI	CCNNGG	8 cut(s)	166, 440, 1131, 1250, 1374, 1626, 1865, 2099
BsaWI	WCCGGW	2 cut(s)	464, 1274
Bsc4I	CCNNNNNNNGG	7 cut(s)	111, 287, 464, 595, 1274, 1405, 2120
Bse118I	RCCGGY	7 cut(s)	389, 457, 580, 1199, 1242, 1267, 1390
Bse1I	ACTGG	2 cut(s)	104, 1985
Bse3DI	GCAATG	1 cut(s)	1116
Bse8I	GATNNNNATC	3 cut(s)	552, 1080, 1362
BseBI	CCWGG	7 cut(s)	167, 441, 590, 687, 1065, 1251, 1400
BseDI	CCNNGG	8 cut(s)	166, 440, 1131, 1250, 1374, 1626, 1865, 2099
BseGI	GGATG	3 cut(s)	86, 321, 1081
BseJI	GATNNNNATC	3 cut(s)	552, 1080, 1362
BseLI	CCNNNNNNNGG	7 cut(s)	111, 287, 464, 595, 1274, 1405, 2120
BseMI	GCAATG	1 cut(s)	1116
BseMII	CTCAG	5 cut(s)	587, 806, 1397, 1931, 2046
BseNI	ACTGG	2 cut(s)	104, 1985
BseRI	GAGGAG	1 cut(s)	1751
BseSI	GKGCMC	1 cut(s)	106
BseXI	GCAGC	8 cut(s)	263, 401, 486, 855, 950, 1211, 1296, 1476
BsgI	GTGCAG	3 cut(s)	311, 660, 977
Bsh1236I	CGCG	1 cut(s)	17
BshNI	GGYRCC	2 cut(s)	498, 1308
BsiHKAI	GWGCWC	5 cut(s)	427, 574, 1237, 1384, 1901
BsiHKCI	CYCGRG	2 cut(s)	420, 1230
BslFI	GGGAC	3 cut(s)	696, 1619, 1716
BslI	CCNNNNNNNGG	7 cut(s)	111, 287, 464, 595, 1274, 1405, 2120
BsmAI	GTCTC	2 cut(s)	313, 1010
BsmFI	GGGAC	3 cut(s)	696, 1619, 1716
Bso31I	GGTCTC	1 cut(s)	1010
BsoBI	CYCGRG	2 cut(s)	420, 1230
Bsp120I	GGGCCC	1 cut(s)	102
Bsp1286I	GDGCHC	6 cut(s)	106, 427, 574, 1237, 1384, 1901
Bsp1407I	TGTACA	1 cut(s)	1113
Bsp68I	TCGCGA	1 cut(s)	17
BspCNI	CTCAG	5 cut(s)	586, 805, 1396, 1930, 2045
BspFNI	CGCG	1 cut(s)	17
BspLI	GGNNCC	9 cut(s)	104, 154, 500, 594, 1310, 1404, 1621, 1704, 1705
BspMI	ACCTGC	1 cut(s)	808
BspPI	GGATC	6 cut(s)	20, 48, 391, 1201, 1634, 1856
BspT107I	GGYRCC	2 cut(s)	498, 1308
BspTNI	GGTCTC	1 cut(s)	1010
BsrBI	CCGCTC	1 cut(s)	345
BsrDI	GCAATG	1 cut(s)	1116
BsrFI	RCCGGY	7 cut(s)	389, 457, 580, 1199, 1242, 1267, 1390
BsrGI	TGTACA	1 cut(s)	1113
BsrI	ACTGG	2 cut(s)	104, 1985
BssAI	RCCGGY	7 cut(s)	389, 457, 580, 1199, 1242, 1267, 1390
BssECI	CCNNGG	8 cut(s)	166, 440, 1131, 1250, 1374, 1626, 1865, 2099
BssNI	GRCGYC	2 cut(s)	499, 1309
BssT1I	CCWWGG	3 cut(s)	1626, 1865, 2099
Bst2UI	CCWGG	7 cut(s)	167, 441, 590, 687, 1065, 1251, 1400
Bst4CI	ACNGT	7 cut(s)	259, 382, 683, 860, 1132, 1192, 1575
Bst6I	CTCTTC	1 cut(s)	956
BstACI	GRCGYC	2 cut(s)	499, 1309
BstAUI	TGTACA	1 cut(s)	1113
BstBAI	YACGTR	1 cut(s)	295
BstDEI	CTNAG	9 cut(s)	302, 573, 792, 1159, 1383, 1468, 1688, 1917, 2032
BstDSI	CCRYGG	1 cut(s)	1131
BstF5I	GGATG	3 cut(s)	86, 321, 1081
BstFNI	CGCG	1 cut(s)	17
BstH2I	RGCGCY	2 cut(s)	502, 1312
BstHHI	GCGC	6 cut(s)	419, 501, 1229, 1311, 1464, 1873
BstMAI	GTCTC	2 cut(s)	313, 1010
BstNI	CCWGG	7 cut(s)	167, 441, 590, 687, 1065, 1251, 1400
BstNSI	RCATGY	1 cut(s)	2062
BstSLI	GKGCMC	1 cut(s)	106
BstUI	CGCG	1 cut(s)	17
BstV1I	GCAGC	8 cut(s)	263, 401, 486, 855, 950, 1211, 1296, 1476
BstV2I	GAAGAC	2 cut(s)	1563, 2061
BstX2I	RGATCY	5 cut(s)	40, 396, 1069, 1206, 1639
BstXI	CCANNNNNNTGG	1 cut(s)	166
BstYI	RGATCY	5 cut(s)	40, 396, 1069, 1206, 1639
BtgI	CCRYGG	1 cut(s)	1131
BtrI	CACGTC	2 cut(s)	1714, 1896
BtsCI	GGATG	3 cut(s)	86, 321, 1081
BtsI	GCAGTG	1 cut(s)	648
BtsIMutI	CAGTG	1 cut(s)	648
BtuMI	TCGCGA	1 cut(s)	17
BveI	ACCTGC	1 cut(s)	808
CfoI	GCGC	6 cut(s)	419, 501, 1229, 1311, 1464, 1873
Cfr10I	RCCGGY	7 cut(s)	389, 457, 580, 1199, 1242, 1267, 1390
CseI	GACGC	2 cut(s)	76, 792
Csp6I	GTAC	3 cut(s)	1114, 1717, 2094
CviAII	CATG	7 cut(s)	71, 244, 406, 1216, 1616, 2059, 2144
CviQI	GTAC	3 cut(s)	1114, 1717, 2094
DdeI	CTNAG	9 cut(s)	302, 573, 792, 1159, 1383, 1468, 1688, 1917, 2032
DinI	GGCGCC	2 cut(s)	500, 1310
DraI	TTTAAA	1 cut(s)	1455
DraIII	CACNNNGTG	2 cut(s)	508, 1318
DrdI	GACNNNNNNGTC	1 cut(s)	802
DriI	GACNNNNNGTC	1 cut(s)	681
DseDI	GACNNNNNNGTC	1 cut(s)	802
EaeI	YGGCCR	3 cut(s)	55, 459, 1269
Eam1104I	CTCTTC	1 cut(s)	956
Eam1105I	GACNNNNNGTC	1 cut(s)	681
EarI	CTCTTC	1 cut(s)	956
EciI	GGCGGA	4 cut(s)	438, 599, 982, 1409
Ecl136II	GAGCTC	4 cut(s)	425, 572, 1235, 1382
Eco130I	CCWWGG	3 cut(s)	1626, 1865, 2099
Eco24I	GRGCYC	5 cut(s)	106, 427, 574, 1237, 1384
Eco31I	GGTCTC	1 cut(s)	1010
Eco47I	GGWCC	5 cut(s)	136, 153, 586, 1396, 1703
Eco53kI	GAGCTC	4 cut(s)	425, 572, 1235, 1382
Eco57I	CTGAAG	1 cut(s)	1572
Eco88I	CYCGRG	2 cut(s)	420, 1230
EcoICRI	GAGCTC	4 cut(s)	425, 572, 1235, 1382
EcoO109I	RGGNCCY	3 cut(s)	443, 1567, 1703
EcoRII	CCWGG	7 cut(s)	165, 439, 588, 685, 1063, 1249, 1398
EcoT14I	CCWWGG	3 cut(s)	1626, 1865, 2099
EcoT38I	GRGCYC	5 cut(s)	106, 427, 574, 1237, 1384
EgeI	GGCGCC	2 cut(s)	500, 1310
EheI	GGCGCC	2 cut(s)	500, 1310
ErhI	CCWWGG	3 cut(s)	1626, 1865, 2099
FaeI	CATG	7 cut(s)	74, 247, 409, 1219, 1619, 2062, 2147
FalI	AAGNNNNNCTT	2 cut(s)	2046, 2078
FaqI	GGGAC	3 cut(s)	696, 1619, 1716
FatI	CATG	7 cut(s)	70, 243, 405, 1215, 1615, 2058, 2143
FauI	CCCGC	2 cut(s)	194, 350
FbaI	TGATCA	1 cut(s)	1888
FblI	GTMKAC	2 cut(s)	731, 1656
FokI	GGATG	3 cut(s)	93, 328, 1088
FriOI	GRGCYC	5 cut(s)	106, 427, 574, 1237, 1384
FspBI	CTAG	5 cut(s)	146, 506, 866, 1316, 1866
GlaI	GCGC	6 cut(s)	418, 500, 1228, 1310, 1463, 1872
GsuI	CTGGAG	1 cut(s)	819
HaeII	RGCGCY	2 cut(s)	502, 1312
HgaI	GACGC	2 cut(s)	76, 792
HhaI	GCGC	6 cut(s)	419, 501, 1229, 1311, 1464, 1873
Hin1I	GRCGYC	2 cut(s)	499, 1309
Hin1II	CATG	7 cut(s)	74, 247, 409, 1219, 1619, 2062, 2147
Hin6I	GCGC	6 cut(s)	417, 499, 1227, 1309, 1462, 1871
HinP1I	GCGC	6 cut(s)	417, 499, 1227, 1309, 1462, 1871
HincII	GTYRAC	2 cut(s)	1657, 2152
HindII	GTYRAC	2 cut(s)	1657, 2152
HinfI	GANTC	5 cut(s)	515, 703, 918, 1325, 2030
HpaI	GTTAAC	1 cut(s)	2152
HphI	GGTGA	4 cut(s)	388, 404, 1198, 1214
Hpy166II	GTNNAC	7 cut(s)	128, 156, 646, 732, 1657, 1717, 2152
Hpy188I	TCNGA	8 cut(s)	45, 576, 795, 1153, 1386, 1893, 1903, 1957
Hpy188III	TCNNGA	7 cut(s)	16, 1024, 1073, 1582, 1643, 1919, 2121
Hpy8I	GTNNAC	7 cut(s)	128, 156, 646, 732, 1657, 1717, 2152
Hpy99I	CGWCG	7 cut(s)	22, 364, 367, 370, 1174, 1177, 1180
HpyAV	CCTTC	7 cut(s)	143, 217, 628, 725, 989, 1036, 1962
HpyCH4III	ACNGT	7 cut(s)	259, 382, 683, 860, 1132, 1192, 1575
HpyCH4IV	ACGT	4 cut(s)	294, 1036, 1713, 1895
HpyCH4V	TGCA	4 cut(s)	328, 641, 958, 1973
HpyF3I	CTNAG	9 cut(s)	302, 573, 792, 1159, 1383, 1468, 1688, 1917, 2032
HpySE526I	ACGT	4 cut(s)	294, 1036, 1713, 1895
Hsp92I	GRCGYC	2 cut(s)	499, 1309
Hsp92II	CATG	7 cut(s)	74, 247, 409, 1219, 1619, 2062, 2147
HspAI	GCGC	6 cut(s)	417, 499, 1227, 1309, 1462, 1871
KasI	GGCGCC	2 cut(s)	498, 1308
KflI	GGGWCCC	1 cut(s)	1703
KroI	GCCGGC	4 cut(s)	457, 580, 1267, 1390
KroNI	GCCGGC	4 cut(s)	459, 582, 1269, 1392
Ksp22I	TGATCA	1 cut(s)	1888
KspAI	GTTAAC	1 cut(s)	2152
LmnI	GCTCC	7 cut(s)	430, 569, 592, 1240, 1379, 1402, 1615
Lsp1109I	GCAGC	8 cut(s)	263, 401, 486, 855, 950, 1211, 1296, 1476
LweI	GCATC	3 cut(s)	1042, 1066, 1960
MaeI	CTAG	5 cut(s)	146, 506, 866, 1316, 1866
MaeII	ACGT	4 cut(s)	294, 1036, 1713, 1895
MaeIII	GTNAC	4 cut(s)	239, 376, 1186, 1546
MbiI	CCGCTC	1 cut(s)	345
MboII	GAAGA	6 cut(s)	923, 973, 1505, 1565, 1568, 2066
MfeI	CAATTG	1 cut(s)	1785
MflI	RGATCY	5 cut(s)	40, 396, 1069, 1206, 1639
MhlI	GDGCHC	6 cut(s)	106, 427, 574, 1237, 1384, 1901
Mly113I	GGCGCC	2 cut(s)	499, 1309
MlyI	GAGTC	3 cut(s)	524, 1334, 2024
MmeI	TCCRAC	2 cut(s)	293, 1019
MroNI	GCCGGC	4 cut(s)	457, 580, 1267, 1390
MseI	TTAA	9 cut(s)	195, 206, 900, 1454, 1511, 1563, 1605, 2064, 2151
MslI	CAYNNNNRTG	1 cut(s)	1712
MspA1I	CMGCKG	2 cut(s)	839, 846
MunI	CAATTG	1 cut(s)	1785
MvaI	CCWGG	7 cut(s)	167, 441, 590, 687, 1065, 1251, 1400
MvnI	CGCG	1 cut(s)	17
NaeI	GCCGGC	4 cut(s)	459, 582, 1269, 1392
NarI	GGCGCC	2 cut(s)	499, 1309
NciI	CCSGG	3 cut(s)	112, 1375, 1431
NgoMIV	GCCGGC	4 cut(s)	457, 580, 1267, 1390
NlaIII	CATG	7 cut(s)	74, 247, 409, 1219, 1619, 2062, 2147
NlaIV	GGNNCC	9 cut(s)	104, 154, 500, 594, 1310, 1404, 1621, 1704, 1705
NmeAIII	GCCGAG	1 cut(s)	33
NmuCI	GTSAC	4 cut(s)	239, 376, 1186, 1546
NruI	TCGCGA	1 cut(s)	17
NspI	RCATGY	1 cut(s)	2062
PaeR7I	CTCGAG	2 cut(s)	420, 1230
PaqCI	CACCTGC	1 cut(s)	808
PdiI	GCCGGC	4 cut(s)	459, 582, 1269, 1392
PfeI	GAWTC	2 cut(s)	703, 918
PflMI	CCANNNNNTGG	2 cut(s)	287, 2120
PfoI	TCCNGGA	2 cut(s)	685, 1429
PleI	GAGTC	3 cut(s)	523, 1333, 2024
PluTI	GGCGCC	2 cut(s)	502, 1312
PpsI	GAGTC	3 cut(s)	523, 1333, 2024
Ppu21I	YACGTR	1 cut(s)	295
PpuMI	RGGWCCY	1 cut(s)	1703
PsiI	TTATAA	1 cut(s)	629
Psp124BI	GAGCTC	4 cut(s)	427, 574, 1237, 1384
Psp5II	RGGWCCY	1 cut(s)	1703
Psp6I	CCWGG	7 cut(s)	165, 439, 588, 685, 1063, 1249, 1398
PspGI	CCWGG	7 cut(s)	165, 439, 588, 685, 1063, 1249, 1398
PspN4I	GGNNCC	9 cut(s)	104, 154, 500, 594, 1310, 1404, 1621, 1704, 1705
PspOMI	GGGCCC	1 cut(s)	102
PspPPI	RGGWCCY	1 cut(s)	1703
PspXI	VCTCGAGB	2 cut(s)	420, 1230
PsuI	RGATCY	5 cut(s)	40, 396, 1069, 1206, 1639
PvuII	CAGCTG	2 cut(s)	839, 846
RruI	TCGCGA	1 cut(s)	17
RsaI	GTAC	3 cut(s)	1115, 1718, 2095
RsaNI	GTAC	3 cut(s)	1114, 1717, 2094
RseI	CAYNNNNRTG	1 cut(s)	1712
SacI	GAGCTC	4 cut(s)	427, 574, 1237, 1384
SalI	GTCGAC	1 cut(s)	1655
SaqAI	TTAA	9 cut(s)	195, 206, 900, 1454, 1511, 1563, 1605, 2064, 2151
SchI	GAGTC	3 cut(s)	524, 1334, 2024
SduI	GDGCHC	6 cut(s)	106, 427, 574, 1237, 1384, 1901
SfaNI	GCATC	3 cut(s)	1042, 1066, 1960
SfoI	GGCGCC	2 cut(s)	500, 1310
Sfr274I	CTCGAG	2 cut(s)	420, 1230
SinI	GGWCC	5 cut(s)	136, 153, 586, 1396, 1703
SlaI	CTCGAG	2 cut(s)	420, 1230
SmiMI	CAYNNNNRTG	1 cut(s)	1712
SmlI	CTYRAG	4 cut(s)	420, 1022, 1230, 1881
SmoI	CTYRAG	4 cut(s)	420, 1022, 1230, 1881
SspDI	GGCGCC	2 cut(s)	498, 1308
SspMI	CTAG	5 cut(s)	146, 506, 866, 1316, 1866
SstI	GAGCTC	4 cut(s)	427, 574, 1237, 1384
StyI	CCWWGG	3 cut(s)	1626, 1865, 2099
TaaI	ACNGT	7 cut(s)	259, 382, 683, 860, 1132, 1192, 1575
TaiI	ACGT	4 cut(s)	297, 1039, 1716, 1898
TaqII	GACCGA	2 cut(s)	153, 1491
TatI	WGTACW	1 cut(s)	1113
TfiI	GAWTC	2 cut(s)	703, 918
Tru1I	TTAA	9 cut(s)	195, 206, 900, 1454, 1511, 1563, 1605, 2064, 2151
Tru9I	TTAA	9 cut(s)	195, 206, 900, 1454, 1511, 1563, 1605, 2064, 2151
TscAI	CASTG	1 cut(s)	648
TseFI	GTSAC	4 cut(s)	239, 376, 1186, 1546
TseI	GCWGC	8 cut(s)	251, 414, 474, 843, 938, 1224, 1284, 1464
Tsp45I	GTSAC	4 cut(s)	239, 376, 1186, 1546
TspDTI	ATGAA	6 cut(s)	260, 669, 877, 1536, 1602, 1662
TspGWI	ACGGA	2 cut(s)	1684, 2027
TspRI	CASTG	1 cut(s)	648
Van91I	CCANNNNNTGG	2 cut(s)	287, 2120
VpaK11BI	GGWCC	5 cut(s)	136, 153, 586, 1396, 1703
XapI	RAATTY	4 cut(s)	61, 884, 1106, 1147
XceI	RCATGY	1 cut(s)	2062
XcmI	CCANNNNNNNNNTGG	1 cut(s)	163
XhoI	CTCGAG	2 cut(s)	420, 1230
XmaJI	CCTAGG	1 cut(s)	1865
XmiI	GTMKAC	2 cut(s)	731, 1656
XspI	CTAG	5 cut(s)	146, 506, 866, 1316, 1866

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.