Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0006005

Physical Location & Seq

Genomic Coordinates Forward (+)

28802754 .. 28807406

Gene Structure 4653 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00406320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGTCCGGCTGCGCTCGAGCTCCCAACCGACAACCAGCGCCGCCGCCGCCGGCTACCGGAGGCGGCAGCCAGATCGTGCCGCCGATGAGGCGCCACCTAGTATTCGAGTCGAATAAGCCGCCGTTTTTTCCTCCGGCTGATTACCATCAATTTTCCGGGGGAGCTCAGAGGCCGGCGGACCAGGAGCCGGAAGCTATTATTGTTCGATCTCCGCAATTTATAAGGAAGGGTGCAGCGGACAACAATGAAGCGGAGAACAACGATTGGACTAGCAGTCCAGGATATAATAATATGATTCAAAGTCCCCTTCAAACTCCTGTGTCTACTACAAAAGCAGGAAAGACAAACAACAGAACAAAGGCTTCAAAGGGCAAATCTGGCCCTCAGACACCTGCGTCAAATGCTGGTTCTCCTTGTCCTCTTACTCCAGCTGGCAGCTGTCGTTTTGACAGTTCTCTAGGTCTATTGACAAAAAAATTCATCAATTTGATTAAGCAAGCAGAAGATGGAATCCTTGATCTAAACAAAGCAGCAGAAACTTTAGAGGTGCAGAAGAGGCGGATATATGACATCACAAATGTCTTGGAAGGCATAGGTCTCATAGAAAAGAAGCTCAAGAACAGAATACGTTGGAAGGGATTTGATGCTTCAAGGCCAGGAGATCTGGATGCTGATCTCTCTATATTACAGGGAGAAGTGGAAAACCTATCTTTAAAAGAGCGCAGCTTAGATGACCGAATAAGAGAGATGGAAGAAAAGTTGAGGGATTTAAGTGGAGATGAAAACAACCGAAAGTGGCTCTTTGTGACTGAAGAAGACATTAAGGGCCTACCATGCTTCCAGAATGAAACCCTGATAGCAATTAAAGCTCCACATGGAACCACCTTGGAAGTCCCAGATCCCGACGAAGCTGTCGACTATCCACAACGGAGATACAGGATAATACTTAGAAGCACAATGGGACCCATTGACGTGTACCTTGTCAGTCAATTTGAGGAGAAGTTTGATGACATCAATGGAGTTGAGCCACCTGTTAGCTTCCCAATTGCTTCTGGTTCTGGCTCTAATGAGCAATCAAGAACAGAAATGGTCAATGGACAAAACAGAGGAAAGGAAATTGATCCTAGGGCGCAACAAGCTCAAGTTGATCAGACGTGCTCTGATGTAAATGCTTCTCAGGAGTTTGGTGGGGGAATGATGAGGATTGTTCCTTCTGATGTTGATAATGATGCAGACTACTGGCTTTTGTCTGGTGTTGATGTTAGCATTACGGATATGTGGAGAACAGACTTGTATTCCTTCACTGTGACTATTTTAGCAGCTATTGAATGGAATGGGGAAGACATGCTTAATGCTGATTTTGGACTGCCCGATGTAAGTACCCCAAGGCCACAAACACCACCATCTGGAATTGTTGAAGTTCCATCTCATGCTGTCAACTTTTCCCAAAGATGCCAAGTGATTGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0045787 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051445 GO:0051446 GO:0051726 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko01522 ko03018 ko04110 ko04218 ko04934 ko05161 ko05166 ko05167 ko05200 ko05206 ko05212 ko05214 ko05215 ko05218 ko05219 ko05220 ko05222 ko05223 ko05224 ko05225 ko05226 map01522 map03018 map04110 map04218 map04934 map05161 map05166 map05167 map05200 map05206 map05212 map05214 map05215 map05218 map05219 map05220 map05222 map05223 map05224 map05225 map05226

Pfam Domains

Protein Families

E2F_CC-MB E2F_TDP

Protein Analysis

489

Amino Acids

53.82

Weight (kDa)

4.97

Isoelectric Point (pI)

49.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_E2F_TDP	PF02319	150 - 213	1.9e-27	E2F/DP family winged-helix DNA-binding domain
E2F_CC-MB	PF16421	229 - 329	1.1e-33	E2F transcription factor CC-MB domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36010 AT2G36010 AT2G36010
fragaria_vesca	FvH4_6g19970 FvH4_6g19970 FvH4_6g19970 FvH4_6g19970 FvH4_6g19970 FvH4_6g19970 FvH4_6g19970
malus_domestica	MD12G1037100.v1.1 MD14G1036100.v1.1
prunus_persica	Prupe.7G098100_v2.0.a1
pyrus_communis	pycom12g03210 pycom14g03180
rosa_chinensis	RchiOBHm_Chr3g0475421
rosa_laevigata	RLG00000023845
rosa_multiflora	Rmu_sc0016637.1_g000006 Rmu_sc0018174.1_g000003
rosa_roxburghii	Rroxscaffold_6G00406320
rosa_rugosa	Rorug03G0148700 Rorug03G0148700
rosa_samantha	Rh3AG198900 Rh3BG228700 Rh3CG223100 Rh3DG224100
rosa_wichuraiana	Rw3G018050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	221
AarI	CACCTGC	1 cut(s)	400
AasI	GACNNNNNNGTC	2 cut(s)	394, 911
Acc36I	ACCTGC	1 cut(s)	400
AccB1I	GGYRCC	1 cut(s)	90
AccB7I	CCANNNNNTGG	1 cut(s)	1406
AccI	GTMKAC	2 cut(s)	323, 915
AclWI	GGATC	2 cut(s)	893, 1115
AcsI	RAATTY	1 cut(s)	476
AcuI	CTGAAG	1 cut(s)	831
AcyI	GRCGYC	1 cut(s)	91
AfaI	GTAC	2 cut(s)	977, 1381
AfiI	CCNNNNNNNGG	3 cut(s)	56, 187, 1406
AflIII	ACRYGT	1 cut(s)	972
AgsI	TTSAA	6 cut(s)	299, 311, 366, 651, 1328, 1418
AhdI	GACNNNNNGTC	1 cut(s)	273
AjiI	CACGTC	2 cut(s)	973, 1155
AjnI	CCWGG	3 cut(s)	180, 277, 655
Alw21I	GWGCWC	3 cut(s)	22, 166, 1160
Alw26I	GTCTC	1 cut(s)	602
AlwI	GGATC	2 cut(s)	893, 1115
Ama87I	CYCGRG	1 cut(s)	15
AoxI	GGCC	5 cut(s)	170, 379, 653, 826, 1388
ApeKI	GCWGC	7 cut(s)	9, 66, 233, 435, 530, 723, 1319
ApoI	RAATTY	1 cut(s)	476
AspA2I	CCTAGG	1 cut(s)	1124
AspLEI	GCGC	5 cut(s)	14, 40, 93, 723, 1132
AspS9I	GGNCC	4 cut(s)	178, 380, 826, 962
AsuC2I	CCSGG	1 cut(s)	157
AvaI	CYCGRG	1 cut(s)	15
AvaII	GGWCC	2 cut(s)	178, 962
AvrII	CCTAGG	1 cut(s)	1124
BanI	GGYRCC	1 cut(s)	90
BanII	GRGCYC	2 cut(s)	22, 166
BbsI	GAAGAC	2 cut(s)	822, 1347
Bbv12I	GWGCWC	3 cut(s)	22, 166, 1160
BbvI	GCAGC	6 cut(s)	78, 245, 447, 542, 735, 1331
BccI	CCATC	5 cut(s)	153, 500, 742, 1411, 1432
BceAI	ACGGC	1 cut(s)	106
BcgI	CGANNNNNNTGC	2 cut(s)	55, 89
BciT130I	CCWGG	3 cut(s)	182, 279, 657
BclI	TGATCA	1 cut(s)	1147
BcnI	CCSGG	1 cut(s)	157
BcoDI	GTCTC	1 cut(s)	602
BfaI	CTAG	4 cut(s)	98, 270, 458, 1125
BfoI	RGCGCY	2 cut(s)	41, 94
BfuAI	ACCTGC	1 cut(s)	400
BglI	GCCNNNNNGGC	1 cut(s)	88
BglII	AGATCT	1 cut(s)	661
BlnI	CCTAGG	1 cut(s)	1124
Bme1390I	CCNGG	4 cut(s)	157, 182, 279, 657
Bme18I	GGWCC	2 cut(s)	178, 962
BmeRI	GACNNNNNGTC	1 cut(s)	273
BmeT110I	CYCGRG	1 cut(s)	15
BmgBI	CACGTC	2 cut(s)	973, 1155
BmgT120I	GGNCC	4 cut(s)	178, 380, 826, 962
BmiI	GGNNCC	5 cut(s)	92, 186, 880, 963, 964
BmrFI	CCNGG	4 cut(s)	157, 182, 279, 657
BmsI	GCATC	4 cut(s)	634, 658, 1219, 1442
BpiI	GAAGAC	2 cut(s)	822, 1347
BpmI	CTGGAG	1 cut(s)	411
BpuEI	CTTGAG	2 cut(s)	599, 1125
BpuMI	CCSGG	1 cut(s)	157
BsaBI	GATNNNNATC	2 cut(s)	144, 672
BsaHI	GRCGYC	1 cut(s)	91
BsaI	GGTCTC	1 cut(s)	602
BsaJI	CCNNGG	4 cut(s)	156, 885, 1124, 1385
BsaWI	WCCGGW	1 cut(s)	56
Bsc4I	CCNNNNNNNGG	3 cut(s)	56, 187, 1406
Bse118I	RCCGGY	2 cut(s)	49, 172
Bse1I	ACTGG	1 cut(s)	1244
Bse8I	GATNNNNATC	2 cut(s)	144, 672
BseBI	CCWGG	3 cut(s)	182, 279, 657
BseDI	CCNNGG	4 cut(s)	156, 885, 1124, 1385
BseGI	GGATG	1 cut(s)	673
BseJI	GATNNNNATC	2 cut(s)	144, 672
BseLI	CCNNNNNNNGG	3 cut(s)	56, 187, 1406
BseMII	CTCAG	3 cut(s)	179, 398, 1190
BseNI	ACTGG	1 cut(s)	1244
BseRI	GAGGAG	1 cut(s)	1010
BseXI	GCAGC	6 cut(s)	78, 245, 447, 542, 735, 1331
BsgI	GTGCAG	2 cut(s)	252, 569
BshFI	GGCC	5 cut(s)	172, 381, 655, 828, 1390
BshNI	GGYRCC	1 cut(s)	90
BsiHKAI	GWGCWC	3 cut(s)	22, 166, 1160
BsiHKCI	CYCGRG	1 cut(s)	15
BsiSI	CCGG	7 cut(s)	6, 50, 57, 134, 156, 173, 188
BslFI	GGGAC	3 cut(s)	288, 878, 975
BslI	CCNNNNNNNGG	3 cut(s)	56, 187, 1406
BsmAI	GTCTC	1 cut(s)	602
BsmFI	GGGAC	3 cut(s)	288, 878, 975
BsnI	GGCC	5 cut(s)	172, 381, 655, 828, 1390
Bso31I	GGTCTC	1 cut(s)	602
BsoBI	CYCGRG	1 cut(s)	15
Bsp1286I	GDGCHC	3 cut(s)	22, 166, 1160
Bsp143I	GATC	8 cut(s)	72, 206, 517, 661, 673, 898, 1120, 1147
BspANI	GGCC	5 cut(s)	172, 381, 655, 828, 1390
BspCNI	CTCAG	3 cut(s)	178, 397, 1189
BspLI	GGNNCC	5 cut(s)	92, 186, 880, 963, 964
BspMI	ACCTGC	1 cut(s)	400
BspPI	GGATC	2 cut(s)	893, 1115
BspT107I	GGYRCC	1 cut(s)	90
BspTNI	GGTCTC	1 cut(s)	602
BsrFI	RCCGGY	2 cut(s)	49, 172
BsrI	ACTGG	1 cut(s)	1244
BssAI	RCCGGY	2 cut(s)	49, 172
BssECI	CCNNGG	4 cut(s)	156, 885, 1124, 1385
BssMI	GATC	8 cut(s)	72, 206, 517, 661, 673, 898, 1120, 1147
BssNI	GRCGYC	1 cut(s)	91
BssT1I	CCWWGG	3 cut(s)	885, 1124, 1385
Bst2UI	CCWGG	3 cut(s)	182, 279, 657
Bst4CI	ACNGT	2 cut(s)	452, 1306
Bst6I	CTCTTC	1 cut(s)	548
BstACI	GRCGYC	1 cut(s)	91
BstC8I	GCNNGC	4 cut(s)	51, 174, 433, 498
BstDEI	CTNAG	5 cut(s)	165, 384, 727, 947, 1176
BstF5I	GGATG	1 cut(s)	673
BstH2I	RGCGCY	2 cut(s)	41, 94
BstHHI	GCGC	5 cut(s)	14, 40, 93, 723, 1132
BstKTI	GATC	8 cut(s)	75, 209, 520, 664, 676, 901, 1123, 1150
BstMAI	GTCTC	1 cut(s)	602
BstMBI	GATC	8 cut(s)	72, 206, 517, 661, 673, 898, 1120, 1147
BstMWI	GCNNNNNNNGC	8 cut(s)	46, 88, 378, 401, 556, 834, 866, 1136
BstNI	CCWGG	3 cut(s)	182, 279, 657
BstNSI	RCATGY	1 cut(s)	1348
BstSCI	CCNGG	4 cut(s)	155, 180, 277, 655
BstV1I	GCAGC	6 cut(s)	78, 245, 447, 542, 735, 1331
BstV2I	GAAGAC	2 cut(s)	822, 1347
BstX2I	RGATCY	2 cut(s)	661, 898
BstYI	RGATCY	2 cut(s)	661, 898
BsuRI	GGCC	5 cut(s)	172, 381, 655, 828, 1390
BtrI	CACGTC	2 cut(s)	973, 1155
BtsCI	GGATG	1 cut(s)	673
BtsIMutI	CAGTG	1 cut(s)	1302
BveI	ACCTGC	1 cut(s)	400
Cac8I	GCNNGC	4 cut(s)	51, 174, 433, 498
CfoI	GCGC	5 cut(s)	14, 40, 93, 723, 1132
Cfr10I	RCCGGY	2 cut(s)	49, 172
Cfr13I	GGNCC	4 cut(s)	178, 380, 826, 962
CseI	GACGC	1 cut(s)	384
Csp6I	GTAC	2 cut(s)	976, 1380
CviAII	CATG	4 cut(s)	834, 875, 1345, 1430
CviQI	GTAC	2 cut(s)	976, 1380
DdeI	CTNAG	5 cut(s)	165, 384, 727, 947, 1176
DinI	GGCGCC	1 cut(s)	92
DpnI	GATC	8 cut(s)	74, 208, 519, 663, 675, 900, 1122, 1149
DpnII	GATC	8 cut(s)	72, 206, 517, 661, 673, 898, 1120, 1147
DraI	TTTAAA	1 cut(s)	714
DrdI	GACNNNNNNGTC	2 cut(s)	394, 911
DriI	GACNNNNNGTC	1 cut(s)	273
DseDI	GACNNNNNNGTC	2 cut(s)	394, 911
Eam1104I	CTCTTC	1 cut(s)	548
Eam1105I	GACNNNNNGTC	1 cut(s)	273
EarI	CTCTTC	1 cut(s)	548
EciI	GGCGGA	2 cut(s)	191, 574
Ecl136II	GAGCTC	2 cut(s)	20, 164
Eco130I	CCWWGG	3 cut(s)	885, 1124, 1385
Eco24I	GRGCYC	2 cut(s)	22, 166
Eco31I	GGTCTC	1 cut(s)	602
Eco47I	GGWCC	2 cut(s)	178, 962
Eco53kI	GAGCTC	2 cut(s)	20, 164
Eco57I	CTGAAG	1 cut(s)	831
Eco88I	CYCGRG	1 cut(s)	15
EcoICRI	GAGCTC	2 cut(s)	20, 164
EcoO109I	RGGNCCY	2 cut(s)	826, 962
EcoRII	CCWGG	3 cut(s)	180, 277, 655
EcoT14I	CCWWGG	3 cut(s)	885, 1124, 1385
EcoT38I	GRGCYC	2 cut(s)	22, 166
EgeI	GGCGCC	1 cut(s)	92
EheI	GGCGCC	1 cut(s)	92
ErhI	CCWWGG	3 cut(s)	885, 1124, 1385
FaeI	CATG	4 cut(s)	837, 878, 1348, 1433
FalI	AAGNNNNNCTT	4 cut(s)	785, 817, 1332, 1364
FaqI	GGGAC	3 cut(s)	288, 878, 975
FatI	CATG	4 cut(s)	833, 874, 1344, 1429
FbaI	TGATCA	1 cut(s)	1147
FblI	GTMKAC	2 cut(s)	323, 915
FokI	GGATG	1 cut(s)	680
FriOI	GRGCYC	2 cut(s)	22, 166
FspBI	CTAG	4 cut(s)	98, 270, 458, 1125
GlaI	GCGC	5 cut(s)	13, 39, 92, 722, 1131
GsuI	CTGGAG	1 cut(s)	411
HaeII	RGCGCY	2 cut(s)	41, 94
HaeIII	GGCC	5 cut(s)	172, 381, 655, 828, 1390
HapII	CCGG	7 cut(s)	6, 50, 57, 134, 156, 173, 188
HgaI	GACGC	1 cut(s)	384
HhaI	GCGC	5 cut(s)	14, 40, 93, 723, 1132
Hin1I	GRCGYC	1 cut(s)	91
Hin1II	CATG	4 cut(s)	837, 878, 1348, 1433
Hin6I	GCGC	5 cut(s)	12, 38, 91, 721, 1130
HinP1I	GCGC	5 cut(s)	12, 38, 91, 721, 1130
HincII	GTYRAC	2 cut(s)	916, 1438
HindII	GTYRAC	2 cut(s)	916, 1438
HinfI	GANTC	3 cut(s)	107, 295, 510
HpaII	CCGG	7 cut(s)	6, 50, 57, 134, 156, 173, 188
Hpy166II	GTNNAC	4 cut(s)	324, 916, 976, 1438
Hpy188I	TCNGA	5 cut(s)	168, 387, 1152, 1162, 1216
Hpy188III	TCNNGA	7 cut(s)	616, 665, 841, 902, 1077, 1178, 1407
Hpy8I	GTNNAC	4 cut(s)	324, 916, 976, 1438
Hpy99I	CGWCG	1 cut(s)	908
HpyAV	CCTTC	6 cut(s)	220, 317, 581, 628, 1221, 1309
HpyCH4III	ACNGT	2 cut(s)	452, 1306
HpyCH4IV	ACGT	3 cut(s)	628, 972, 1154
HpyCH4V	TGCA	3 cut(s)	233, 550, 1232
HpyF10VI	GCNNNNNNNGC	8 cut(s)	46, 88, 378, 401, 556, 834, 866, 1136
HpyF3I	CTNAG	5 cut(s)	165, 384, 727, 947, 1176
HpySE526I	ACGT	3 cut(s)	628, 972, 1154
Hsp92I	GRCGYC	1 cut(s)	91
Hsp92II	CATG	4 cut(s)	837, 878, 1348, 1433
HspAI	GCGC	5 cut(s)	12, 38, 91, 721, 1130
KasI	GGCGCC	1 cut(s)	90
KflI	GGGWCCC	1 cut(s)	962
KroI	GCCGGC	2 cut(s)	49, 172
KroNI	GCCGGC	2 cut(s)	51, 174
Ksp22I	TGATCA	1 cut(s)	1147
Kzo9I	GATC	8 cut(s)	72, 206, 517, 661, 673, 898, 1120, 1147
LmnI	GCTCC	4 cut(s)	25, 161, 184, 874
Lsp1109I	GCAGC	6 cut(s)	78, 245, 447, 542, 735, 1331
LweI	GCATC	4 cut(s)	634, 658, 1219, 1442
MaeI	CTAG	4 cut(s)	98, 270, 458, 1125
MaeII	ACGT	3 cut(s)	628, 972, 1154
MaeIII	GTNAC	2 cut(s)	805, 1306
MalI	GATC	8 cut(s)	74, 208, 519, 663, 675, 900, 1122, 1149
MboI	GATC	8 cut(s)	72, 206, 517, 661, 673, 898, 1120, 1147
MboII	GAAGA	6 cut(s)	515, 565, 764, 824, 827, 1352
MfeI	CAATTG	1 cut(s)	1044
MflI	RGATCY	2 cut(s)	661, 898
MhlI	GDGCHC	3 cut(s)	22, 166, 1160
MluCI	AATT	9 cut(s)	149, 215, 476, 484, 861, 989, 1044, 1116, 1410
Mly113I	GGCGCC	1 cut(s)	91
MlyI	GAGTC	1 cut(s)	116
MmeI	TCCRAC	1 cut(s)	611
MroNI	GCCGGC	2 cut(s)	49, 172
MseI	TTAA	6 cut(s)	492, 713, 770, 822, 864, 1350
MslI	CAYNNNNRTG	1 cut(s)	971
MspA1I	CMGCKG	3 cut(s)	236, 431, 438
MspI	CCGG	7 cut(s)	6, 50, 57, 134, 156, 173, 188
MspR9I	CCNGG	4 cut(s)	157, 182, 279, 657
MunI	CAATTG	1 cut(s)	1044
MvaI	CCWGG	3 cut(s)	182, 279, 657
MwoI	GCNNNNNNNGC	8 cut(s)	46, 88, 378, 401, 556, 834, 866, 1136
NaeI	GCCGGC	2 cut(s)	51, 174
NarI	GGCGCC	1 cut(s)	91
NciI	CCSGG	1 cut(s)	157
NdeII	GATC	8 cut(s)	72, 206, 517, 661, 673, 898, 1120, 1147
NgoMIV	GCCGGC	2 cut(s)	49, 172
NlaIII	CATG	4 cut(s)	837, 878, 1348, 1433
NlaIV	GGNNCC	5 cut(s)	92, 186, 880, 963, 964
NmuCI	GTSAC	2 cut(s)	805, 1306
NspI	RCATGY	1 cut(s)	1348
PaeR7I	CTCGAG	1 cut(s)	15
PaqCI	CACCTGC	1 cut(s)	400
PcsI	WCGNNNNNNNCGW	1 cut(s)	912
PdiI	GCCGGC	2 cut(s)	51, 174
PfeI	GAWTC	2 cut(s)	295, 510
PflMI	CCANNNNNTGG	1 cut(s)	1406
PfoI	TCCNGGA	1 cut(s)	277
PleI	GAGTC	1 cut(s)	115
PluTI	GGCGCC	1 cut(s)	94
PpsI	GAGTC	1 cut(s)	115
PpuMI	RGGWCCY	1 cut(s)	962
PsiI	TTATAA	1 cut(s)	221
Psp124BI	GAGCTC	2 cut(s)	22, 166
Psp5II	RGGWCCY	1 cut(s)	962
Psp6I	CCWGG	3 cut(s)	180, 277, 655
PspGI	CCWGG	3 cut(s)	180, 277, 655
PspN4I	GGNNCC	5 cut(s)	92, 186, 880, 963, 964
PspPI	GGNCC	4 cut(s)	178, 380, 826, 962
PspPPI	RGGWCCY	1 cut(s)	962
PspXI	VCTCGAGB	1 cut(s)	15
PsuI	RGATCY	2 cut(s)	661, 898
PvuII	CAGCTG	2 cut(s)	431, 438
RsaI	GTAC	2 cut(s)	977, 1381
RsaNI	GTAC	2 cut(s)	976, 1380
RseI	CAYNNNNRTG	1 cut(s)	971
SacI	GAGCTC	2 cut(s)	22, 166
SalI	GTCGAC	1 cut(s)	914
SaqAI	TTAA	6 cut(s)	492, 713, 770, 822, 864, 1350
Sau3AI	GATC	8 cut(s)	72, 206, 517, 661, 673, 898, 1120, 1147
Sau96I	GGNCC	4 cut(s)	178, 380, 826, 962
SchI	GAGTC	1 cut(s)	116
ScrFI	CCNGG	4 cut(s)	157, 182, 279, 657
SduI	GDGCHC	3 cut(s)	22, 166, 1160
SfaNI	GCATC	4 cut(s)	634, 658, 1219, 1442
SfoI	GGCGCC	1 cut(s)	92
Sfr274I	CTCGAG	1 cut(s)	15
SinI	GGWCC	2 cut(s)	178, 962
SlaI	CTCGAG	1 cut(s)	15
SmiMI	CAYNNNNRTG	1 cut(s)	971
SmlI	CTYRAG	3 cut(s)	15, 614, 1140
SmoI	CTYRAG	3 cut(s)	15, 614, 1140
Sse9I	AATT	9 cut(s)	149, 215, 476, 484, 861, 989, 1044, 1116, 1410
SspDI	GGCGCC	1 cut(s)	90
SspMI	CTAG	4 cut(s)	98, 270, 458, 1125
SstI	GAGCTC	2 cut(s)	22, 166
StyD4I	CCNGG	4 cut(s)	155, 180, 277, 655
StyI	CCWWGG	3 cut(s)	885, 1124, 1385
TaaI	ACNGT	2 cut(s)	452, 1306
TaiI	ACGT	3 cut(s)	631, 975, 1157
TaqI	TCGA	5 cut(s)	16, 105, 110, 205, 915
TaqII	GACCGA	1 cut(s)	750
TasI	AATT	9 cut(s)	149, 215, 476, 484, 861, 989, 1044, 1116, 1410
TauI	GCSGC	6 cut(s)	43, 46, 49, 66, 82, 121
TfiI	GAWTC	2 cut(s)	295, 510
Tru1I	TTAA	6 cut(s)	492, 713, 770, 822, 864, 1350
Tru9I	TTAA	6 cut(s)	492, 713, 770, 822, 864, 1350
TscAI	CASTG	1 cut(s)	1309
TseFI	GTSAC	2 cut(s)	805, 1306
TseI	GCWGC	7 cut(s)	9, 66, 233, 435, 530, 723, 1319
Tsp45I	GTSAC	2 cut(s)	805, 1306
TspDTI	ATGAA	4 cut(s)	261, 469, 795, 861
TspGWI	ACGGA	2 cut(s)	943, 1286
TspRI	CASTG	1 cut(s)	1309
Van91I	CCANNNNNTGG	1 cut(s)	1406
VpaK11BI	GGWCC	2 cut(s)	178, 962
XapI	RAATTY	1 cut(s)	476
XceI	RCATGY	1 cut(s)	1348
XhoI	CTCGAG	1 cut(s)	15
XmaJI	CCTAGG	1 cut(s)	1124
XmiI	GTMKAC	2 cut(s)	323, 915
XspI	CTAG	4 cut(s)	98, 270, 458, 1125

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.