Prupe.7G116700_v2.0.a1

Plant protein of unknown function (DUF868)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0014762
Physical Location & Seq
Reverse (-)
14170574 .. 14171963
1390 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G116700.1

Sequence Viewer

Length: 921 bp
ATGAGGAGCATAGCAACTTGTTACAGTGAACATGCCATAAAAGTATCAGATTCATATTGTTCAGGGCCTTCAAACCGGGCTTATGTGACCCCAAGATTGGCCCCTTCAATCCCAAATGAGGTTACATGTATATACAGAGCCAAGCTCTCAACCCAGAAGCATCTCCTCATCACACTCACCTGGTACAACAAATTTTCAGGCCAAGGCCTCAAAATCAGCATTGGGGACAAAGAAAATACCTCTTCACCAATATCCAAATTCAATTCCAGTTCATATCAACTGCAAGGTCAAAAGGGTACCAGGACATTCCAATCCTGCAATTCAAAGATGGAAGTTTTCTGGGATTTGTCCACTGCTACTTATGATGGAGGACCAGAACCAAGCAATGGGTTTTATGTGATGGTTTTAGCAGACTCAGAACTTAGCCTGCTTCTTGGGGACAAGGTTGAAGAAGTGCTTGATTTGGAGAAATACAAAACCATCATTTCTCAGCCAAAATTCTCATTGGTTTCTAGGAGTGAGCATTTTTCTGGCAATGCTGTGTATTCAACCAAGGCTCAATTCTGTGACAGAGGAGCTGCACATGACATCTTGATCAAGTGTGACAGAGACGACGAAGGCAGCTCGAAAGGCCCGGTGTTATCAGTCTGCATTGACAAGAAGAAAATATTTCAAGTGAAGAGATTGAAATGGAATTTCAGAGGGAACCAAGCAATTTTTTTGGATGGTTTGCTGGTGGATATGATGTGGGATATTCATGACTGGTTGTTCAATCCAAAATCGGGTTCTGCAGTTTTCATGTTCAGGACAAGGAGTGGATTGGATAGCAGGCTGTGGCTGGAAGAGAAGATTTTGGAACAGAAGGGACAAGAAAGAGCTGAGTTTTCTTTGTTGATCTGTGCCTGTAAGAGCCCTGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF868

Protein Analysis

307

Amino Acids

34.47

Weight (kDa)

8.47

Isoelectric Point (pI)

35.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014762)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g17950
malus_domestica MD12G1018600.v1.1 MD14G1016600.v1.1
prunus_persica Prupe.7G116700_v2.0.a1
pyrus_communis pycom12g01540 pycom14g01420
rosa_chinensis RchiOBHm_Chr3g0472211
rosa_laevigata RLG00000024097
rosa_multiflora Rmu_sc0002532.1_g000035
rosa_roxburghii Rroxscaffold_6G00409150
rosa_rugosa Rorug03G0122800
rosa_samantha Rh3AG175200 Rh3BG200200 Rh3CG191700 Rh3CG199000 Rh3DG174200
rosa_wichuraiana Rw3G016610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 296
AccB1I GGYRCC 1 cut(s) 296
AccB7I CCANNNNNTGG 1 cut(s) 386
AcsI RAATTY 4 cut(s) 191, 257, 497, 694
AfaI GTAC 2 cut(s) 185, 298
AfiI CCNNNNNNNGG 4 cut(s) 97, 118, 386, 782
AflIII ACRYGT 1 cut(s) 125
AgsI TTSAA 9 cut(s) 72, 108, 262, 324, 449, 549, 674, 688, 772
AjnI CCWGG 2 cut(s) 179, 299
AjuI GAANNNNNNNTTGG 4 cut(s) 545, 577, 769, 801
AluBI AGCT 4 cut(s) 145, 578, 624, 878
AluI AGCT 4 cut(s) 145, 578, 624, 878
Alw26I GTCTC 1 cut(s) 603
AoxI GGCC 5 cut(s) 65, 99, 199, 205, 631
ApeKI GCWGC 2 cut(s) 578, 621
ApoI RAATTY 4 cut(s) 191, 257, 497, 694
Asp718I GGTACC 1 cut(s) 296
AspS9I GGNCC 4 cut(s) 65, 100, 371, 632
AsuC2I CCSGG 2 cut(s) 77, 635
AsuHPI GGTGA 2 cut(s) 169, 237
AvaII GGWCC 1 cut(s) 371
BanI GGYRCC 1 cut(s) 296
BanII GRGCYC 1 cut(s) 914
BbvI GCAGC 2 cut(s) 565, 633
BccI CCATC 5 cut(s) 322, 359, 394, 488, 719
BciT130I CCWGG 2 cut(s) 181, 301
BclI TGATCA 1 cut(s) 594
BcnI CCSGG 2 cut(s) 77, 635
BcoDI GTCTC 1 cut(s) 603
BfaI CTAG 1 cut(s) 513
BfmI CTRYAG 1 cut(s) 789
BisI GCNGC 2 cut(s) 579, 622
BlsI GCNGC 2 cut(s) 580, 623
Bme1390I CCNGG 4 cut(s) 77, 181, 301, 635
Bme18I GGWCC 1 cut(s) 371
BmgT120I GGNCC 4 cut(s) 65, 100, 371, 632
BmiI GGNNCC 3 cut(s) 102, 298, 707
BmrFI CCNGG 4 cut(s) 77, 181, 301, 635
BmsI GCATC 1 cut(s) 169
BplI GAGNNNNNCTC 2 cut(s) 129, 161
BpuMI CCSGG 2 cut(s) 77, 635
BsaJI CCNNGG 2 cut(s) 202, 552
Bsc4I CCNNNNNNNGG 4 cut(s) 97, 118, 386, 782
Bse1I ACTGG 2 cut(s) 267, 767
Bse3DI GCAATG 2 cut(s) 391, 541
BseBI CCWGG 2 cut(s) 181, 301
BseDI CCNNGG 2 cut(s) 202, 552
BseGI GGATG 1 cut(s) 730
BseLI CCNNNNNNNGG 4 cut(s) 97, 118, 386, 782
BseMI GCAATG 2 cut(s) 391, 541
BseMII CTCAG 3 cut(s) 429, 503, 870
BseNI ACTGG 2 cut(s) 267, 767
BseRI GAGGAG 3 cut(s) 19, 155, 588
BseXI GCAGC 2 cut(s) 565, 633
BsgI GTGCAG 1 cut(s) 564
BshFI GGCC 5 cut(s) 67, 101, 201, 207, 633
BshNI GGYRCC 1 cut(s) 296
BsiSI CCGG 2 cut(s) 76, 635
BslFI GGGAC 3 cut(s) 239, 452, 879
BslI CCNNNNNNNGG 4 cut(s) 97, 118, 386, 782
BsmAI GTCTC 1 cut(s) 603
BsmBI CGTCTC 1 cut(s) 603
BsmFI GGGAC 3 cut(s) 239, 452, 879
BsnI GGCC 5 cut(s) 67, 101, 201, 207, 633
Bsp1286I GDGCHC 1 cut(s) 914
Bsp143I GATC 2 cut(s) 594, 894
BspANI GGCC 5 cut(s) 67, 101, 201, 207, 633
BspCNI CTCAG 3 cut(s) 428, 502, 871
BspHI TCATGA 1 cut(s) 757
BspLI GGNNCC 3 cut(s) 102, 298, 707
BspMAI CTGCAG 1 cut(s) 793
BspT107I GGYRCC 1 cut(s) 296
BsrDI GCAATG 2 cut(s) 391, 541
BsrI ACTGG 2 cut(s) 267, 767
BssECI CCNNGG 2 cut(s) 202, 552
BssMI GATC 2 cut(s) 594, 894
BssT1I CCWWGG 2 cut(s) 202, 552
Bst2UI CCWGG 2 cut(s) 181, 301
Bst4CI ACNGT 1 cut(s) 26
Bst6I CTCTTC 3 cut(s) 247, 674, 837
BstC8I GCNNGC 2 cut(s) 428, 830
BstDEI CTNAG 4 cut(s) 415, 422, 489, 879
BstF5I GGATG 1 cut(s) 730
BstKTI GATC 2 cut(s) 597, 897
BstMAI GTCTC 1 cut(s) 603
BstMBI GATC 2 cut(s) 594, 894
BstMWI GCNNNNNNNGC 1 cut(s) 630
BstNI CCWGG 2 cut(s) 181, 301
BstNSI RCATGY 2 cut(s) 35, 129
BstSCI CCNGG 4 cut(s) 75, 179, 299, 633
BstSFI CTRYAG 1 cut(s) 789
BstV1I GCAGC 2 cut(s) 565, 633
BsuRI GGCC 5 cut(s) 67, 101, 201, 207, 633
BtsCI GGATG 1 cut(s) 730
BtsI GCAGTG 1 cut(s) 351
BtsIMutI CAGTG 2 cut(s) 31, 351
Cac8I GCNNGC 2 cut(s) 428, 830
CciI TCATGA 1 cut(s) 757
Cfr13I GGNCC 4 cut(s) 65, 100, 371, 632
CsiI ACCWGGT 1 cut(s) 179
Csp6I GTAC 2 cut(s) 184, 297
CviAII CATG 5 cut(s) 32, 126, 584, 758, 799
CviQI GTAC 2 cut(s) 184, 297
DdeI CTNAG 4 cut(s) 415, 422, 489, 879
DpnI GATC 2 cut(s) 596, 896
DpnII GATC 2 cut(s) 594, 894
Eam1104I CTCTTC 3 cut(s) 247, 674, 837
EarI CTCTTC 3 cut(s) 247, 674, 837
Eco130I CCWWGG 2 cut(s) 202, 552
Eco147I AGGCCT 1 cut(s) 207
Eco24I GRGCYC 1 cut(s) 914
Eco47I GGWCC 1 cut(s) 371
EcoO109I RGGNCCY 1 cut(s) 65
EcoRII CCWGG 2 cut(s) 179, 299
EcoT14I CCWWGG 2 cut(s) 202, 552
EcoT38I GRGCYC 1 cut(s) 914
ErhI CCWWGG 2 cut(s) 202, 552
Esp3I CGTCTC 1 cut(s) 603
FaeI CATG 5 cut(s) 35, 129, 587, 761, 802
FalI AAGNNNNNCTT 2 cut(s) 441, 473
FaqI GGGAC 3 cut(s) 239, 452, 879
FatI CATG 5 cut(s) 31, 125, 583, 757, 798
FbaI TGATCA 1 cut(s) 594
Fnu4HI GCNGC 2 cut(s) 579, 622
FokI GGATG 1 cut(s) 737
FriOI GRGCYC 1 cut(s) 914
Fsp4HI GCNGC 2 cut(s) 579, 622
FspBI CTAG 1 cut(s) 513
GluI GCNGC 2 cut(s) 579, 622
HaeIII GGCC 5 cut(s) 67, 101, 201, 207, 633
HapII CCGG 2 cut(s) 76, 635
Hin1II CATG 5 cut(s) 35, 129, 587, 761, 802
HinfI GANTC 2 cut(s) 50, 413
HpaII CCGG 2 cut(s) 76, 635
HphI GGTGA 2 cut(s) 169, 237
Hpy166II GTNNAC 2 cut(s) 29, 351
Hpy188I TCNGA 3 cut(s) 49, 418, 701
Hpy188III TCNNGA 3 cut(s) 592, 758, 805
Hpy8I GTNNAC 2 cut(s) 29, 351
Hpy99I CGWCG 1 cut(s) 617
HpyAV CCTTC 4 cut(s) 78, 114, 611, 856
HpyCH4III ACNGT 1 cut(s) 26
HpyCH4V TGCA 5 cut(s) 283, 318, 581, 651, 791
HpyF10VI GCNNNNNNNGC 1 cut(s) 630
HpyF3I CTNAG 4 cut(s) 415, 422, 489, 879
Hsp92II CATG 5 cut(s) 35, 129, 587, 761, 802
KpnI GGTACC 1 cut(s) 300
Ksp22I TGATCA 1 cut(s) 594
Kzo9I GATC 2 cut(s) 594, 894
LmnI GCTCC 2 cut(s) 6, 575
Lsp1109I GCAGC 2 cut(s) 565, 633
LweI GCATC 1 cut(s) 169
MabI ACCWGGT 1 cut(s) 179
MaeI CTAG 1 cut(s) 513
MaeIII GTNAC 5 cut(s) 20, 85, 121, 566, 602
MalI GATC 2 cut(s) 596, 896
MboI GATC 2 cut(s) 594, 894
MboII GAAGA 6 cut(s) 234, 461, 673, 691, 854, 859
MhlI GDGCHC 1 cut(s) 914
MluCI AATT 8 cut(s) 191, 257, 262, 319, 497, 560, 694, 714
MlyI GAGTC 1 cut(s) 407
MnlI CCTC 7 cut(s) 112, 176, 218, 250, 362, 566, 695
MspI CCGG 2 cut(s) 76, 635
MspR9I CCNGG 4 cut(s) 77, 181, 301, 635
MvaI CCWGG 2 cut(s) 181, 301
MwoI GCNNNNNNNGC 1 cut(s) 630
NciI CCSGG 2 cut(s) 77, 635
NdeII GATC 2 cut(s) 594, 894
NlaIII CATG 5 cut(s) 35, 129, 587, 761, 802
NlaIV GGNNCC 3 cut(s) 102, 298, 707
NmuCI GTSAC 3 cut(s) 85, 566, 602
NspI RCATGY 2 cut(s) 35, 129
PagI TCATGA 1 cut(s) 757
PceI AGGCCT 1 cut(s) 207
PciI ACATGT 1 cut(s) 125
PfeI GAWTC 1 cut(s) 50
PflMI CCANNNNNTGG 1 cut(s) 386
PkrI GCNGC 2 cut(s) 580, 623
PleI GAGTC 1 cut(s) 407
PpsI GAGTC 1 cut(s) 407
PscI ACATGT 1 cut(s) 125
Psp6I CCWGG 2 cut(s) 179, 299
PspGI CCWGG 2 cut(s) 179, 299
PspN4I GGNNCC 3 cut(s) 102, 298, 707
PspPI GGNCC 4 cut(s) 65, 100, 371, 632
PstI CTGCAG 1 cut(s) 793
RsaI GTAC 2 cut(s) 185, 298
RsaNI GTAC 2 cut(s) 184, 297
SatI GCNGC 2 cut(s) 579, 622
Sau3AI GATC 2 cut(s) 594, 894
Sau96I GGNCC 4 cut(s) 65, 100, 371, 632
SchI GAGTC 1 cut(s) 407
ScrFI CCNGG 4 cut(s) 77, 181, 301, 635
SduI GDGCHC 1 cut(s) 914
SetI ASST 9 cut(s) 123, 147, 182, 242, 289, 447, 580, 626, 880
SexAI ACCWGGT 1 cut(s) 179
SfaNI GCATC 1 cut(s) 169
SfcI CTRYAG 1 cut(s) 789
SinI GGWCC 1 cut(s) 371
Sse9I AATT 8 cut(s) 191, 257, 262, 319, 497, 560, 694, 714
SseBI AGGCCT 1 cut(s) 207
SspI AATATT 1 cut(s) 669
SspMI CTAG 1 cut(s) 513
StuI AGGCCT 1 cut(s) 207
StyD4I CCNGG 4 cut(s) 75, 179, 299, 633
StyI CCWWGG 2 cut(s) 202, 552
TaaI ACNGT 1 cut(s) 26
TaqI TCGA 1 cut(s) 626
TasI AATT 8 cut(s) 191, 257, 262, 319, 497, 560, 694, 714
TfiI GAWTC 1 cut(s) 50
TscAI CASTG 2 cut(s) 31, 358
TseFI GTSAC 3 cut(s) 85, 566, 602
TseI GCWGC 2 cut(s) 578, 621
Tsp45I GTSAC 3 cut(s) 85, 566, 602
TspDTI ATGAA 4 cut(s) 42, 261, 746, 787
TspRI CASTG 2 cut(s) 31, 358
Van91I CCANNNNNTGG 1 cut(s) 386
VpaK11BI GGWCC 1 cut(s) 371
XapI RAATTY 4 cut(s) 191, 257, 497, 694
XceI RCATGY 2 cut(s) 35, 129
XspI CTAG 1 cut(s) 513
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.