3-deoxy-D-manno-octulosonic acid
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G03770 AT5G03770 AT5G03770 |
| fragaria_vesca | FvH4_6g17520 |
| malus_domestica | MD14G1093900.v1.1 |
| prunus_persica | Prupe.7G120300_v2.0.a1 Prupe.7G120300_v2.0.a1 Prupe.7G120300_v2.0.a1 Prupe.7G120300_v2.0.a1 Prupe.7G120300_v2.0.a1 Prupe.7G120300_v2.0.a1 |
| pyrus_communis | pycom14g09140 |
| rosa_chinensis | RchiOBHm_Chr3g0471781 |
| rosa_laevigata | RLG00000024135 |
| rosa_multiflora | Rmu_co7989814.1_g000001 Rmu_sc0011517.1_g000007 |
| rosa_roxburghii | Rroxscaffold_6G00409570 |
| rosa_rugosa | Rorug03G0119700 |
| rosa_samantha | Rh3AG170900 Rh3BG196600 Rh3CG187500 Rh3DG178200 |
| rosa_wichuraiana | Rw3G016930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 284 |
| Acc36I | ACCTGC | 1 cut(s) | 1144 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 854 |
| AciI | CCGC | 3 cut(s) | 5, 121, 288 |
| AclI | AACGTT | 2 cut(s) | 33, 508 |
| AclWI | GGATC | 2 cut(s) | 175, 188 |
| AcoI | YGGCCR | 1 cut(s) | 425 |
| AcsI | RAATTY | 4 cut(s) | 430, 668, 940, 1212 |
| AcuI | CTGAAG | 1 cut(s) | 432 |
| AcyI | GRCGYC | 2 cut(s) | 281, 1206 |
| AdeI | CACNNNGTG | 1 cut(s) | 796 |
| AfaI | GTAC | 4 cut(s) | 74, 717, 812, 1231 |
| AfeI | AGCGCT | 1 cut(s) | 45 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 854, 1094 |
| AgsI | TTSAA | 5 cut(s) | 296, 652, 665, 973, 1178 |
| AluBI | AGCT | 8 cut(s) | 172, 607, 902, 1001, 1055, 1064, 1235, 1326 |
| AluI | AGCT | 8 cut(s) | 172, 607, 902, 1001, 1055, 1064, 1235, 1326 |
| Alw21I | GWGCWC | 1 cut(s) | 801 |
| Alw26I | GTCTC | 3 cut(s) | 62, 915, 927 |
| AlwI | GGATC | 2 cut(s) | 175, 188 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 610, 1001, 1055 |
| Ama87I | CYCGRG | 3 cut(s) | 107, 163, 483 |
| Aor51HI | AGCGCT | 1 cut(s) | 45 |
| AoxI | GGCC | 5 cut(s) | 103, 125, 139, 248, 425 |
| ApeKI | GCWGC | 6 cut(s) | 169, 212, 1055, 1058, 1061, 1235 |
| ApoI | RAATTY | 4 cut(s) | 430, 668, 940, 1212 |
| AspLEI | GCGC | 3 cut(s) | 46, 93, 343 |
| AspS9I | GGNCC | 3 cut(s) | 139, 518, 1085 |
| AsuC2I | CCSGG | 2 cut(s) | 164, 165 |
| AsuHPI | GGTGA | 5 cut(s) | 54, 71, 212, 656, 977 |
| AvaI | CYCGRG | 3 cut(s) | 107, 163, 483 |
| AvaII | GGWCC | 2 cut(s) | 518, 1085 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1232, 1265 |
| BalI | TGGCCA | 1 cut(s) | 427 |
| BamHI | GGATCC | 1 cut(s) | 180 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 762, 794 |
| BbsI | GAAGAC | 3 cut(s) | 305, 1185, 1283 |
| Bbv12I | GWGCWC | 1 cut(s) | 801 |
| BbvI | GCAGC | 6 cut(s) | 181, 199, 1042, 1045, 1073, 1222 |
| BccI | CCATC | 2 cut(s) | 269, 736 |
| BceAI | ACGGC | 1 cut(s) | 173 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1088, 1122 |
| BclI | TGATCA | 1 cut(s) | 630 |
| BcnI | CCSGG | 2 cut(s) | 164, 165 |
| BcoDI | GTCTC | 3 cut(s) | 62, 915, 927 |
| BfaI | CTAG | 3 cut(s) | 782, 1217, 1295 |
| BfmI | CTRYAG | 2 cut(s) | 1059, 1151 |
| BfoI | RGCGCY | 1 cut(s) | 47 |
| BfuAI | ACCTGC | 1 cut(s) | 1144 |
| BglII | AGATCT | 1 cut(s) | 706 |
| BisI | GCNGC | 7 cut(s) | 6, 170, 213, 1056, 1059, 1062, 1236 |
| BlpI | GCTNAGC | 1 cut(s) | 47 |
| BlsI | GCNGC | 7 cut(s) | 7, 171, 214, 1057, 1060, 1063, 1237 |
| Bme1390I | CCNGG | 2 cut(s) | 164, 165 |
| Bme18I | GGWCC | 2 cut(s) | 518, 1085 |
| BmeT110I | CYCGRG | 3 cut(s) | 107, 163, 483 |
| BmgT120I | GGNCC | 3 cut(s) | 139, 518, 1085 |
| BmiI | GGNNCC | 2 cut(s) | 182, 1086 |
| BmrFI | CCNGG | 2 cut(s) | 164, 165 |
| BmsI | GCATC | 2 cut(s) | 121, 537 |
| BpiI | GAAGAC | 3 cut(s) | 305, 1185, 1283 |
| BpmI | CTGGAG | 1 cut(s) | 978 |
| Bpu10I | CCTNAGC | 1 cut(s) | 129 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 47 |
| BpuMI | CCSGG | 2 cut(s) | 164, 165 |
| BsaHI | GRCGYC | 2 cut(s) | 281, 1206 |
| BsaI | GGTCTC | 2 cut(s) | 62, 915 |
| BsaJI | CCNNGG | 6 cut(s) | 52, 100, 162, 163, 164, 376 |
| BsaWI | WCCGGW | 1 cut(s) | 729 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 854, 1094 |
| Bse1I | ACTGG | 6 cut(s) | 92, 325, 389, 471, 995, 1270 |
| Bse3DI | GCAATG | 2 cut(s) | 65, 521 |
| BseDI | CCNNGG | 6 cut(s) | 52, 100, 162, 163, 164, 376 |
| BseGI | GGATG | 4 cut(s) | 112, 747, 749, 844 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 854, 1094 |
| BseMI | GCAATG | 2 cut(s) | 65, 521 |
| BseMII | CTCAG | 4 cut(s) | 38, 120, 672, 896 |
| BseNI | ACTGG | 6 cut(s) | 92, 325, 389, 471, 995, 1270 |
| BseRI | GAGGAG | 1 cut(s) | 164 |
| BseXI | GCAGC | 6 cut(s) | 181, 199, 1042, 1045, 1073, 1222 |
| BshFI | GGCC | 5 cut(s) | 105, 127, 141, 250, 427 |
| BsiHKAI | GWGCWC | 1 cut(s) | 801 |
| BsiHKCI | CYCGRG | 3 cut(s) | 107, 163, 483 |
| BsiSI | CCGG | 2 cut(s) | 164, 730 |
| BslFI | GGGAC | 2 cut(s) | 144, 557 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 854, 1094 |
| BsmAI | GTCTC | 3 cut(s) | 62, 915, 927 |
| BsmFI | GGGAC | 2 cut(s) | 144, 557 |
| BsmI | GAATGC | 2 cut(s) | 237, 786 |
| BsnI | GGCC | 5 cut(s) | 105, 127, 141, 250, 427 |
| Bso31I | GGTCTC | 2 cut(s) | 62, 915 |
| BsoBI | CYCGRG | 3 cut(s) | 107, 163, 483 |
| Bsp1286I | GDGCHC | 1 cut(s) | 801 |
| Bsp143I | GATC | 4 cut(s) | 180, 630, 690, 706 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 47 |
| Bsp19I | CCATGG | 1 cut(s) | 52 |
| BspACI | CCGC | 3 cut(s) | 5, 121, 288 |
| BspANI | GGCC | 5 cut(s) | 105, 127, 141, 250, 427 |
| BspCNI | CTCAG | 4 cut(s) | 39, 121, 673, 897 |
| BspLI | GGNNCC | 2 cut(s) | 182, 1086 |
| BspMAI | CTGCAG | 2 cut(s) | 1063, 1155 |
| BspMI | ACCTGC | 1 cut(s) | 1144 |
| BspPI | GGATC | 2 cut(s) | 175, 188 |
| BspQI | GCTCTTC | 1 cut(s) | 8 |
| BspTNI | GGTCTC | 2 cut(s) | 62, 915 |
| BsrDI | GCAATG | 2 cut(s) | 65, 521 |
| BsrI | ACTGG | 6 cut(s) | 92, 325, 389, 471, 995, 1270 |
| BssECI | CCNNGG | 6 cut(s) | 52, 100, 162, 163, 164, 376 |
| BssMI | GATC | 4 cut(s) | 180, 630, 690, 706 |
| BssNI | GRCGYC | 2 cut(s) | 281, 1206 |
| BssT1I | CCWWGG | 1 cut(s) | 52 |
| Bst4CI | ACNGT | 3 cut(s) | 423, 810, 1131 |
| Bst6I | CTCTTC | 1 cut(s) | 8 |
| BstACI | GRCGYC | 2 cut(s) | 281, 1206 |
| BstC8I | GCNNGC | 4 cut(s) | 125, 591, 615, 1066 |
| BstDEI | CTNAG | 4 cut(s) | 47, 129, 681, 905 |
| BstDSI | CCRYGG | 1 cut(s) | 52 |
| BstF5I | GGATG | 4 cut(s) | 112, 747, 749, 844 |
| BstH2I | RGCGCY | 1 cut(s) | 47 |
| BstHHI | GCGC | 3 cut(s) | 46, 93, 343 |
| BstKTI | GATC | 4 cut(s) | 183, 633, 693, 709 |
| BstMAI | GTCTC | 3 cut(s) | 62, 915, 927 |
| BstMBI | GATC | 4 cut(s) | 180, 630, 690, 706 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1061, 1070, 1123, 1275 |
| BstNSI | RCATGY | 1 cut(s) | 617 |
| BstSCI | CCNGG | 2 cut(s) | 162, 163 |
| BstSFI | CTRYAG | 2 cut(s) | 1059, 1151 |
| BstV1I | GCAGC | 6 cut(s) | 181, 199, 1042, 1045, 1073, 1222 |
| BstV2I | GAAGAC | 3 cut(s) | 305, 1185, 1283 |
| BstX2I | RGATCY | 2 cut(s) | 180, 706 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 123 |
| BstYI | RGATCY | 2 cut(s) | 180, 706 |
| BsuRI | GGCC | 5 cut(s) | 105, 127, 141, 250, 427 |
| BtgI | CCRYGG | 1 cut(s) | 52 |
| BtsCI | GGATG | 4 cut(s) | 112, 747, 749, 844 |
| BtsIMutI | CAGTG | 3 cut(s) | 85, 382, 464 |
| BveI | ACCTGC | 1 cut(s) | 1144 |
| Cac8I | GCNNGC | 4 cut(s) | 125, 591, 615, 1066 |
| CaiI | CAGNNNCTG | 3 cut(s) | 610, 1001, 1055 |
| CfoI | GCGC | 3 cut(s) | 46, 93, 343 |
| Cfr13I | GGNCC | 3 cut(s) | 139, 518, 1085 |
| Cfr9I | CCCGGG | 1 cut(s) | 163 |
| CseI | GACGC | 2 cut(s) | 1190, 1214 |
| Csp6I | GTAC | 4 cut(s) | 73, 716, 811, 1230 |
| CviAII | CATG | 6 cut(s) | 53, 614, 802, 854, 917, 1111 |
| CviQI | GTAC | 4 cut(s) | 73, 716, 811, 1230 |
| DdeI | CTNAG | 4 cut(s) | 47, 129, 681, 905 |
| DpnI | GATC | 4 cut(s) | 182, 632, 692, 708 |
| DpnII | GATC | 4 cut(s) | 180, 630, 690, 706 |
| DraI | TTTAAA | 1 cut(s) | 505 |
| DraIII | CACNNNGTG | 1 cut(s) | 796 |
| EaeI | YGGCCR | 1 cut(s) | 425 |
| Eam1104I | CTCTTC | 1 cut(s) | 8 |
| EarI | CTCTTC | 1 cut(s) | 8 |
| Eco130I | CCWWGG | 1 cut(s) | 52 |
| Eco147I | AGGCCT | 2 cut(s) | 105, 250 |
| Eco31I | GGTCTC | 2 cut(s) | 62, 915 |
| Eco47I | GGWCC | 2 cut(s) | 518, 1085 |
| Eco47III | AGCGCT | 1 cut(s) | 45 |
| Eco57I | CTGAAG | 1 cut(s) | 432 |
| Eco88I | CYCGRG | 3 cut(s) | 107, 163, 483 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1085 |
| EcoT14I | CCWWGG | 1 cut(s) | 52 |
| EcoT22I | ATGCAT | 1 cut(s) | 239 |
| ErhI | CCWWGG | 1 cut(s) | 52 |
| FaeI | CATG | 6 cut(s) | 56, 617, 805, 857, 920, 1114 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 705, 737, 1170, 1202 |
| FaqI | GGGAC | 2 cut(s) | 144, 557 |
| FatI | CATG | 6 cut(s) | 52, 613, 801, 853, 916, 1110 |
| FbaI | TGATCA | 1 cut(s) | 630 |
| Fnu4HI | GCNGC | 7 cut(s) | 6, 170, 213, 1056, 1059, 1062, 1236 |
| FokI | GGATG | 4 cut(s) | 99, 736, 754, 831 |
| Fsp4HI | GCNGC | 7 cut(s) | 6, 170, 213, 1056, 1059, 1062, 1236 |
| FspBI | CTAG | 3 cut(s) | 782, 1217, 1295 |
| GlaI | GCGC | 3 cut(s) | 45, 92, 342 |
| GluI | GCNGC | 7 cut(s) | 6, 170, 213, 1056, 1059, 1062, 1236 |
| GsuI | CTGGAG | 1 cut(s) | 978 |
| HaeII | RGCGCY | 1 cut(s) | 47 |
| HaeIII | GGCC | 5 cut(s) | 105, 127, 141, 250, 427 |
| HapII | CCGG | 2 cut(s) | 164, 730 |
| HgaI | GACGC | 2 cut(s) | 1190, 1214 |
| HhaI | GCGC | 3 cut(s) | 46, 93, 343 |
| Hin1I | GRCGYC | 2 cut(s) | 281, 1206 |
| Hin1II | CATG | 6 cut(s) | 56, 617, 805, 857, 920, 1114 |
| Hin6I | GCGC | 3 cut(s) | 44, 91, 341 |
| HinP1I | GCGC | 3 cut(s) | 44, 91, 341 |
| HincII | GTYRAC | 3 cut(s) | 825, 990, 1263 |
| HindII | GTYRAC | 3 cut(s) | 825, 990, 1263 |
| HinfI | GANTC | 3 cut(s) | 368, 1288, 1306 |
| HpaI | GTTAAC | 2 cut(s) | 825, 990 |
| HpaII | CCGG | 2 cut(s) | 164, 730 |
| HphI | GGTGA | 5 cut(s) | 54, 71, 212, 656, 977 |
| Hpy166II | GTNNAC | 7 cut(s) | 28, 37, 419, 825, 955, 990, 1263 |
| Hpy188I | TCNGA | 7 cut(s) | 101, 451, 682, 695, 906, 1051, 1305 |
| Hpy188III | TCNNGA | 6 cut(s) | 178, 265, 516, 1161, 1217, 1295 |
| Hpy8I | GTNNAC | 7 cut(s) | 28, 37, 419, 825, 955, 990, 1263 |
| Hpy99I | CGWCG | 2 cut(s) | 283, 286 |
| HpyAV | CCTTC | 7 cut(s) | 86, 156, 161, 197, 240, 366, 881 |
| HpyCH4III | ACNGT | 3 cut(s) | 423, 810, 1131 |
| HpyCH4IV | ACGT | 4 cut(s) | 33, 281, 310, 508 |
| HpyCH4V | TGCA | 8 cut(s) | 237, 589, 613, 805, 1061, 1126, 1153, 1238 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1061, 1070, 1123, 1275 |
| HpyF3I | CTNAG | 4 cut(s) | 47, 129, 681, 905 |
| HpySE526I | ACGT | 4 cut(s) | 33, 281, 310, 508 |
| Hsp92I | GRCGYC | 2 cut(s) | 281, 1206 |
| Hsp92II | CATG | 6 cut(s) | 56, 617, 805, 857, 920, 1114 |
| HspAI | GCGC | 3 cut(s) | 44, 91, 341 |
| Ksp22I | TGATCA | 1 cut(s) | 630 |
| KspAI | GTTAAC | 2 cut(s) | 825, 990 |
| Kzo9I | GATC | 4 cut(s) | 180, 630, 690, 706 |
| LguI | GCTCTTC | 1 cut(s) | 8 |
| LmnI | GCTCC | 2 cut(s) | 177, 622 |
| Lsp1109I | GCAGC | 6 cut(s) | 181, 199, 1042, 1045, 1073, 1222 |
| LweI | GCATC | 2 cut(s) | 121, 537 |
| MaeI | CTAG | 3 cut(s) | 782, 1217, 1295 |
| MaeII | ACGT | 4 cut(s) | 33, 281, 310, 508 |
| MaeIII | GTNAC | 4 cut(s) | 380, 644, 1037, 1202 |
| MalI | GATC | 4 cut(s) | 182, 632, 692, 708 |
| MboI | GATC | 4 cut(s) | 180, 630, 690, 706 |
| MboII | GAAGA | 8 cut(s) | 25, 305, 677, 716, 779, 782, 1190, 1283 |
| MflI | RGATCY | 2 cut(s) | 180, 706 |
| MhlI | GDGCHC | 1 cut(s) | 801 |
| MlsI | TGGCCA | 1 cut(s) | 427 |
| MluCI | AATT | 8 cut(s) | 430, 435, 668, 875, 940, 968, 1005, 1212 |
| MluNI | TGGCCA | 1 cut(s) | 427 |
| MlyI | GAGTC | 2 cut(s) | 362, 1297 |
| MmeI | TCCRAC | 1 cut(s) | 341 |
| Mox20I | TGGCCA | 1 cut(s) | 427 |
| Mph1103I | ATGCAT | 1 cut(s) | 239 |
| MscI | TGGCCA | 1 cut(s) | 427 |
| MseI | TTAA | 8 cut(s) | 434, 476, 504, 824, 989, 1133, 1188, 1322 |
| MslI | CAYNNNNRTG | 1 cut(s) | 266 |
| Msp20I | TGGCCA | 1 cut(s) | 427 |
| MspA1I | CMGCKG | 3 cut(s) | 123, 1064, 1235 |
| MspI | CCGG | 2 cut(s) | 164, 730 |
| MspR9I | CCNGG | 2 cut(s) | 164, 165 |
| Mva1269I | GAATGC | 2 cut(s) | 237, 786 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1061, 1070, 1123, 1275 |
| NciI | CCSGG | 2 cut(s) | 164, 165 |
| NcoI | CCATGG | 1 cut(s) | 52 |
| NdeII | GATC | 4 cut(s) | 180, 630, 690, 706 |
| NlaIII | CATG | 6 cut(s) | 56, 617, 805, 857, 920, 1114 |
| NlaIV | GGNNCC | 2 cut(s) | 182, 1086 |
| NmuCI | GTSAC | 4 cut(s) | 380, 644, 1037, 1202 |
| NsiI | ATGCAT | 1 cut(s) | 239 |
| NspI | RCATGY | 1 cut(s) | 617 |
| PaeI | GCATGC | 1 cut(s) | 617 |
| PaeR7I | CTCGAG | 2 cut(s) | 107, 483 |
| PceI | AGGCCT | 2 cut(s) | 105, 250 |
| PciSI | GCTCTTC | 1 cut(s) | 8 |
| PctI | GAATGC | 2 cut(s) | 237, 786 |
| PfeI | GAWTC | 1 cut(s) | 1306 |
| PflFI | GACNNNGTC | 1 cut(s) | 283 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 854 |
| PkrI | GCNGC | 7 cut(s) | 7, 171, 214, 1057, 1060, 1063, 1237 |
| PleI | GAGTC | 2 cut(s) | 362, 1296 |
| PpsI | GAGTC | 2 cut(s) | 362, 1296 |
| PpuMI | RGGWCCY | 1 cut(s) | 1085 |
| Psp1406I | AACGTT | 2 cut(s) | 33, 508 |
| Psp5II | RGGWCCY | 1 cut(s) | 1085 |
| PspN4I | GGNNCC | 2 cut(s) | 182, 1086 |
| PspPI | GGNCC | 3 cut(s) | 139, 518, 1085 |
| PspPPI | RGGWCCY | 1 cut(s) | 1085 |
| PspXI | VCTCGAGB | 2 cut(s) | 107, 483 |
| PstI | CTGCAG | 2 cut(s) | 1063, 1155 |
| PstNI | CAGNNNCTG | 3 cut(s) | 610, 1001, 1055 |
| PsuI | RGATCY | 2 cut(s) | 180, 706 |
| PsyI | GACNNNGTC | 1 cut(s) | 283 |
| PvuII | CAGCTG | 2 cut(s) | 1064, 1235 |
| RsaI | GTAC | 4 cut(s) | 74, 717, 812, 1231 |
| RsaNI | GTAC | 4 cut(s) | 73, 716, 811, 1230 |
| RseI | CAYNNNNRTG | 1 cut(s) | 266 |
| SapI | GCTCTTC | 1 cut(s) | 8 |
| SaqAI | TTAA | 8 cut(s) | 434, 476, 504, 824, 989, 1133, 1188, 1322 |
| SatI | GCNGC | 7 cut(s) | 6, 170, 213, 1056, 1059, 1062, 1236 |
| Sau3AI | GATC | 4 cut(s) | 180, 630, 690, 706 |
| Sau96I | GGNCC | 3 cut(s) | 139, 518, 1085 |
| SchI | GAGTC | 2 cut(s) | 362, 1297 |
| ScrFI | CCNGG | 2 cut(s) | 164, 165 |
| SduI | GDGCHC | 1 cut(s) | 801 |
| SfaNI | GCATC | 2 cut(s) | 121, 537 |
| SfcI | CTRYAG | 2 cut(s) | 1059, 1151 |
| Sfr274I | CTCGAG | 2 cut(s) | 107, 483 |
| SinI | GGWCC | 2 cut(s) | 518, 1085 |
| SlaI | CTCGAG | 2 cut(s) | 107, 483 |
| SmaI | CCCGGG | 1 cut(s) | 165 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 266 |
| SmlI | CTYRAG | 2 cut(s) | 107, 483 |
| SmoI | CTYRAG | 2 cut(s) | 107, 483 |
| SphI | GCATGC | 1 cut(s) | 617 |
| Sse9I | AATT | 8 cut(s) | 430, 435, 668, 875, 940, 968, 1005, 1212 |
| SseBI | AGGCCT | 2 cut(s) | 105, 250 |
| SsiI | CCGC | 3 cut(s) | 5, 121, 288 |
| SspMI | CTAG | 3 cut(s) | 782, 1217, 1295 |
| StuI | AGGCCT | 2 cut(s) | 105, 250 |
| StyD4I | CCNGG | 2 cut(s) | 162, 163 |
| StyI | CCWWGG | 1 cut(s) | 52 |
| TaaI | ACNGT | 3 cut(s) | 423, 810, 1131 |
| TaiI | ACGT | 4 cut(s) | 36, 284, 313, 511 |
| TaqI | TCGA | 3 cut(s) | 108, 484, 841 |
| TaqII | GACCGA | 1 cut(s) | 368 |
| TasI | AATT | 8 cut(s) | 430, 435, 668, 875, 940, 968, 1005, 1212 |
| TatI | WGTACW | 1 cut(s) | 715 |
| TauI | GCSGC | 1 cut(s) | 8 |
| TfiI | GAWTC | 1 cut(s) | 1306 |
| Tru1I | TTAA | 8 cut(s) | 434, 476, 504, 824, 989, 1133, 1188, 1322 |
| Tru9I | TTAA | 8 cut(s) | 434, 476, 504, 824, 989, 1133, 1188, 1322 |
| TscAI | CASTG | 3 cut(s) | 92, 389, 471 |
| TseFI | GTSAC | 4 cut(s) | 380, 644, 1037, 1202 |
| TseI | GCWGC | 6 cut(s) | 169, 212, 1055, 1058, 1061, 1235 |
| Tsp45I | GTSAC | 4 cut(s) | 380, 644, 1037, 1202 |
| TspDTI | ATGAA | 2 cut(s) | 183, 738 |
| TspMI | CCCGGG | 1 cut(s) | 163 |
| TspRI | CASTG | 3 cut(s) | 92, 389, 471 |
| Tth111I | GACNNNGTC | 1 cut(s) | 283 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 854 |
| VpaK11BI | GGWCC | 2 cut(s) | 518, 1085 |
| XapI | RAATTY | 4 cut(s) | 430, 668, 940, 1212 |
| XbaI | TCTAGA | 2 cut(s) | 1216, 1294 |
| XceI | RCATGY | 1 cut(s) | 617 |
| XhoI | CTCGAG | 2 cut(s) | 107, 483 |
| XmaI | CCCGGG | 1 cut(s) | 163 |
| XspI | CTAG | 3 cut(s) | 782, 1217, 1295 |
| ZraI | GACGTC | 1 cut(s) | 282 |
| Zsp2I | ATGCAT | 1 cut(s) | 239 |